mirror of
https://github.com/SheffieldML/GPy.git
synced 2026-05-02 08:12:39 +02:00
36214 lines
1.8 MiB
36214 lines
1.8 MiB
/* Generated by Cython 0.29.21 */
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#define PY_SSIZE_T_CLEAN
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#include "Python.h"
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#ifndef Py_PYTHON_H
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#error Python headers needed to compile C extensions, please install development version of Python.
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#elif PY_VERSION_HEX < 0x02060000 || (0x03000000 <= PY_VERSION_HEX && PY_VERSION_HEX < 0x03030000)
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#error Cython requires Python 2.6+ or Python 3.3+.
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#else
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#define CYTHON_ABI "0_29_21"
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#define CYTHON_HEX_VERSION 0x001D15F0
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#define CYTHON_FUTURE_DIVISION 0
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#include <stddef.h>
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#ifndef offsetof
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#define offsetof(type, member) ( (size_t) & ((type*)0) -> member )
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#endif
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#if !defined(WIN32) && !defined(MS_WINDOWS)
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#ifndef __stdcall
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#define __stdcall
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#endif
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#ifndef __cdecl
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#define __cdecl
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#endif
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#ifndef __fastcall
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#define __fastcall
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#endif
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#endif
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#ifndef DL_IMPORT
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#define DL_IMPORT(t) t
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#endif
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#ifndef DL_EXPORT
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#define DL_EXPORT(t) t
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#endif
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#define __PYX_COMMA ,
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#ifndef HAVE_LONG_LONG
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#if PY_VERSION_HEX >= 0x02070000
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#define HAVE_LONG_LONG
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#endif
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#endif
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#ifndef PY_LONG_LONG
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#define PY_LONG_LONG LONG_LONG
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#endif
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#ifndef Py_HUGE_VAL
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#define Py_HUGE_VAL HUGE_VAL
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#endif
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#ifdef PYPY_VERSION
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#define CYTHON_COMPILING_IN_PYPY 1
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#define CYTHON_COMPILING_IN_PYSTON 0
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#define CYTHON_COMPILING_IN_CPYTHON 0
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#undef CYTHON_USE_TYPE_SLOTS
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#define CYTHON_USE_TYPE_SLOTS 0
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#undef CYTHON_USE_PYTYPE_LOOKUP
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#define CYTHON_USE_PYTYPE_LOOKUP 0
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#if PY_VERSION_HEX < 0x03050000
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#undef CYTHON_USE_ASYNC_SLOTS
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#define CYTHON_USE_ASYNC_SLOTS 0
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#elif !defined(CYTHON_USE_ASYNC_SLOTS)
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#define CYTHON_USE_ASYNC_SLOTS 1
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#endif
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#undef CYTHON_USE_PYLIST_INTERNALS
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#define CYTHON_USE_PYLIST_INTERNALS 0
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#undef CYTHON_USE_UNICODE_INTERNALS
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#define CYTHON_USE_UNICODE_INTERNALS 0
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#undef CYTHON_USE_UNICODE_WRITER
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#define CYTHON_USE_UNICODE_WRITER 0
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#undef CYTHON_USE_PYLONG_INTERNALS
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#define CYTHON_USE_PYLONG_INTERNALS 0
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#undef CYTHON_AVOID_BORROWED_REFS
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#define CYTHON_AVOID_BORROWED_REFS 1
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#undef CYTHON_ASSUME_SAFE_MACROS
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#define CYTHON_ASSUME_SAFE_MACROS 0
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#undef CYTHON_UNPACK_METHODS
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#define CYTHON_UNPACK_METHODS 0
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#undef CYTHON_FAST_THREAD_STATE
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#define CYTHON_FAST_THREAD_STATE 0
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#undef CYTHON_FAST_PYCALL
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#define CYTHON_FAST_PYCALL 0
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#undef CYTHON_PEP489_MULTI_PHASE_INIT
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#define CYTHON_PEP489_MULTI_PHASE_INIT 0
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#undef CYTHON_USE_TP_FINALIZE
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#define CYTHON_USE_TP_FINALIZE 0
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#undef CYTHON_USE_DICT_VERSIONS
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#define CYTHON_USE_DICT_VERSIONS 0
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#undef CYTHON_USE_EXC_INFO_STACK
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#define CYTHON_USE_EXC_INFO_STACK 0
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#elif defined(PYSTON_VERSION)
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#define CYTHON_COMPILING_IN_PYPY 0
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#define CYTHON_COMPILING_IN_PYSTON 1
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#define CYTHON_COMPILING_IN_CPYTHON 0
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#ifndef CYTHON_USE_TYPE_SLOTS
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#define CYTHON_USE_TYPE_SLOTS 1
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#endif
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#undef CYTHON_USE_PYTYPE_LOOKUP
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#define CYTHON_USE_PYTYPE_LOOKUP 0
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#undef CYTHON_USE_ASYNC_SLOTS
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#define CYTHON_USE_ASYNC_SLOTS 0
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#undef CYTHON_USE_PYLIST_INTERNALS
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#define CYTHON_USE_PYLIST_INTERNALS 0
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#ifndef CYTHON_USE_UNICODE_INTERNALS
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#define CYTHON_USE_UNICODE_INTERNALS 1
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#endif
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#undef CYTHON_USE_UNICODE_WRITER
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#define CYTHON_USE_UNICODE_WRITER 0
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#undef CYTHON_USE_PYLONG_INTERNALS
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#define CYTHON_USE_PYLONG_INTERNALS 0
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#ifndef CYTHON_AVOID_BORROWED_REFS
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#define CYTHON_AVOID_BORROWED_REFS 0
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#endif
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#ifndef CYTHON_ASSUME_SAFE_MACROS
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#define CYTHON_ASSUME_SAFE_MACROS 1
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#endif
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#ifndef CYTHON_UNPACK_METHODS
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#define CYTHON_UNPACK_METHODS 1
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#endif
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#undef CYTHON_FAST_THREAD_STATE
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#define CYTHON_FAST_THREAD_STATE 0
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#undef CYTHON_FAST_PYCALL
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#define CYTHON_FAST_PYCALL 0
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#undef CYTHON_PEP489_MULTI_PHASE_INIT
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#define CYTHON_PEP489_MULTI_PHASE_INIT 0
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#undef CYTHON_USE_TP_FINALIZE
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#define CYTHON_USE_TP_FINALIZE 0
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#undef CYTHON_USE_DICT_VERSIONS
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#define CYTHON_USE_DICT_VERSIONS 0
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#undef CYTHON_USE_EXC_INFO_STACK
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#define CYTHON_USE_EXC_INFO_STACK 0
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#else
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#define CYTHON_COMPILING_IN_PYPY 0
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#define CYTHON_COMPILING_IN_PYSTON 0
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#define CYTHON_COMPILING_IN_CPYTHON 1
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#ifndef CYTHON_USE_TYPE_SLOTS
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#define CYTHON_USE_TYPE_SLOTS 1
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#endif
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#if PY_VERSION_HEX < 0x02070000
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#undef CYTHON_USE_PYTYPE_LOOKUP
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#define CYTHON_USE_PYTYPE_LOOKUP 0
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#elif !defined(CYTHON_USE_PYTYPE_LOOKUP)
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#define CYTHON_USE_PYTYPE_LOOKUP 1
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#endif
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#if PY_MAJOR_VERSION < 3
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#undef CYTHON_USE_ASYNC_SLOTS
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#define CYTHON_USE_ASYNC_SLOTS 0
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#elif !defined(CYTHON_USE_ASYNC_SLOTS)
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#define CYTHON_USE_ASYNC_SLOTS 1
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#endif
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#if PY_VERSION_HEX < 0x02070000
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#undef CYTHON_USE_PYLONG_INTERNALS
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#define CYTHON_USE_PYLONG_INTERNALS 0
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#elif !defined(CYTHON_USE_PYLONG_INTERNALS)
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#define CYTHON_USE_PYLONG_INTERNALS 1
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#endif
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#ifndef CYTHON_USE_PYLIST_INTERNALS
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#define CYTHON_USE_PYLIST_INTERNALS 1
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#endif
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#ifndef CYTHON_USE_UNICODE_INTERNALS
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#define CYTHON_USE_UNICODE_INTERNALS 1
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#endif
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#if PY_VERSION_HEX < 0x030300F0
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#undef CYTHON_USE_UNICODE_WRITER
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#define CYTHON_USE_UNICODE_WRITER 0
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#elif !defined(CYTHON_USE_UNICODE_WRITER)
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#define CYTHON_USE_UNICODE_WRITER 1
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#endif
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#ifndef CYTHON_AVOID_BORROWED_REFS
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#define CYTHON_AVOID_BORROWED_REFS 0
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#endif
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#ifndef CYTHON_ASSUME_SAFE_MACROS
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#define CYTHON_ASSUME_SAFE_MACROS 1
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#endif
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#ifndef CYTHON_UNPACK_METHODS
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#define CYTHON_UNPACK_METHODS 1
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#endif
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#ifndef CYTHON_FAST_THREAD_STATE
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#define CYTHON_FAST_THREAD_STATE 1
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#endif
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#ifndef CYTHON_FAST_PYCALL
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#define CYTHON_FAST_PYCALL 1
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#endif
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#ifndef CYTHON_PEP489_MULTI_PHASE_INIT
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#define CYTHON_PEP489_MULTI_PHASE_INIT (PY_VERSION_HEX >= 0x03050000)
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#endif
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#ifndef CYTHON_USE_TP_FINALIZE
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#define CYTHON_USE_TP_FINALIZE (PY_VERSION_HEX >= 0x030400a1)
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#endif
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#ifndef CYTHON_USE_DICT_VERSIONS
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#define CYTHON_USE_DICT_VERSIONS (PY_VERSION_HEX >= 0x030600B1)
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#endif
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#ifndef CYTHON_USE_EXC_INFO_STACK
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#define CYTHON_USE_EXC_INFO_STACK (PY_VERSION_HEX >= 0x030700A3)
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#endif
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#endif
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#if !defined(CYTHON_FAST_PYCCALL)
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#define CYTHON_FAST_PYCCALL (CYTHON_FAST_PYCALL && PY_VERSION_HEX >= 0x030600B1)
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#endif
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#if CYTHON_USE_PYLONG_INTERNALS
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#include "longintrepr.h"
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#undef SHIFT
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#undef BASE
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#undef MASK
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#ifdef SIZEOF_VOID_P
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enum { __pyx_check_sizeof_voidp = 1 / (int)(SIZEOF_VOID_P == sizeof(void*)) };
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#endif
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#endif
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#ifndef __has_attribute
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#define __has_attribute(x) 0
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#endif
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#ifndef __has_cpp_attribute
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#define __has_cpp_attribute(x) 0
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#endif
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#ifndef CYTHON_RESTRICT
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#if defined(__GNUC__)
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#define CYTHON_RESTRICT __restrict__
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#elif defined(_MSC_VER) && _MSC_VER >= 1400
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#define CYTHON_RESTRICT __restrict
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#elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L
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#define CYTHON_RESTRICT restrict
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#else
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#define CYTHON_RESTRICT
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#endif
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#endif
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#ifndef CYTHON_UNUSED
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# if defined(__GNUC__)
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# if !(defined(__cplusplus)) || (__GNUC__ > 3 || (__GNUC__ == 3 && __GNUC_MINOR__ >= 4))
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# define CYTHON_UNUSED __attribute__ ((__unused__))
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# else
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# define CYTHON_UNUSED
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# endif
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# elif defined(__ICC) || (defined(__INTEL_COMPILER) && !defined(_MSC_VER))
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# define CYTHON_UNUSED __attribute__ ((__unused__))
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# else
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# define CYTHON_UNUSED
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# endif
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#endif
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#ifndef CYTHON_MAYBE_UNUSED_VAR
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# if defined(__cplusplus)
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template<class T> void CYTHON_MAYBE_UNUSED_VAR( const T& ) { }
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# else
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# define CYTHON_MAYBE_UNUSED_VAR(x) (void)(x)
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# endif
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#endif
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#ifndef CYTHON_NCP_UNUSED
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# if CYTHON_COMPILING_IN_CPYTHON
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# define CYTHON_NCP_UNUSED
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# else
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# define CYTHON_NCP_UNUSED CYTHON_UNUSED
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# endif
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#endif
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#define __Pyx_void_to_None(void_result) ((void)(void_result), Py_INCREF(Py_None), Py_None)
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#ifdef _MSC_VER
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#ifndef _MSC_STDINT_H_
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#if _MSC_VER < 1300
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typedef unsigned char uint8_t;
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typedef unsigned int uint32_t;
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#else
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typedef unsigned __int8 uint8_t;
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typedef unsigned __int32 uint32_t;
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#endif
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#endif
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#else
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#include <stdint.h>
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#endif
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#ifndef CYTHON_FALLTHROUGH
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#if defined(__cplusplus) && __cplusplus >= 201103L
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#if __has_cpp_attribute(fallthrough)
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#define CYTHON_FALLTHROUGH [[fallthrough]]
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#elif __has_cpp_attribute(clang::fallthrough)
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#define CYTHON_FALLTHROUGH [[clang::fallthrough]]
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#elif __has_cpp_attribute(gnu::fallthrough)
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#define CYTHON_FALLTHROUGH [[gnu::fallthrough]]
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#endif
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#endif
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#ifndef CYTHON_FALLTHROUGH
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#if __has_attribute(fallthrough)
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#define CYTHON_FALLTHROUGH __attribute__((fallthrough))
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#else
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#define CYTHON_FALLTHROUGH
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#endif
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#endif
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#if defined(__clang__ ) && defined(__apple_build_version__)
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#if __apple_build_version__ < 7000000
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#undef CYTHON_FALLTHROUGH
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#define CYTHON_FALLTHROUGH
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#endif
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#endif
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#endif
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#ifndef CYTHON_INLINE
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#if defined(__clang__)
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#define CYTHON_INLINE __inline__ __attribute__ ((__unused__))
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#elif defined(__GNUC__)
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#define CYTHON_INLINE __inline__
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#elif defined(_MSC_VER)
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#define CYTHON_INLINE __inline
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#elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L
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#define CYTHON_INLINE inline
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#else
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#define CYTHON_INLINE
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#endif
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#endif
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#if CYTHON_COMPILING_IN_PYPY && PY_VERSION_HEX < 0x02070600 && !defined(Py_OptimizeFlag)
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#define Py_OptimizeFlag 0
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#endif
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#define __PYX_BUILD_PY_SSIZE_T "n"
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#define CYTHON_FORMAT_SSIZE_T "z"
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#if PY_MAJOR_VERSION < 3
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#define __Pyx_BUILTIN_MODULE_NAME "__builtin__"
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#define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)\
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PyCode_New(a+k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)
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#define __Pyx_DefaultClassType PyClass_Type
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#else
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#define __Pyx_BUILTIN_MODULE_NAME "builtins"
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#if PY_VERSION_HEX >= 0x030800A4 && PY_VERSION_HEX < 0x030800B2
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#define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)\
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PyCode_New(a, 0, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)
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#else
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#define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)\
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PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)
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#endif
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#define __Pyx_DefaultClassType PyType_Type
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#endif
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#ifndef Py_TPFLAGS_CHECKTYPES
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#define Py_TPFLAGS_CHECKTYPES 0
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#endif
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#ifndef Py_TPFLAGS_HAVE_INDEX
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#define Py_TPFLAGS_HAVE_INDEX 0
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#endif
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#ifndef Py_TPFLAGS_HAVE_NEWBUFFER
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#define Py_TPFLAGS_HAVE_NEWBUFFER 0
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#endif
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#ifndef Py_TPFLAGS_HAVE_FINALIZE
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#define Py_TPFLAGS_HAVE_FINALIZE 0
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#endif
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#ifndef METH_STACKLESS
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#define METH_STACKLESS 0
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#endif
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#if PY_VERSION_HEX <= 0x030700A3 || !defined(METH_FASTCALL)
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#ifndef METH_FASTCALL
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#define METH_FASTCALL 0x80
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#endif
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typedef PyObject *(*__Pyx_PyCFunctionFast) (PyObject *self, PyObject *const *args, Py_ssize_t nargs);
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typedef PyObject *(*__Pyx_PyCFunctionFastWithKeywords) (PyObject *self, PyObject *const *args,
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Py_ssize_t nargs, PyObject *kwnames);
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#else
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#define __Pyx_PyCFunctionFast _PyCFunctionFast
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#define __Pyx_PyCFunctionFastWithKeywords _PyCFunctionFastWithKeywords
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#endif
|
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#if CYTHON_FAST_PYCCALL
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#define __Pyx_PyFastCFunction_Check(func)\
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((PyCFunction_Check(func) && (METH_FASTCALL == (PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST | METH_KEYWORDS | METH_STACKLESS)))))
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#else
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#define __Pyx_PyFastCFunction_Check(func) 0
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#endif
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#if CYTHON_COMPILING_IN_PYPY && !defined(PyObject_Malloc)
|
|
#define PyObject_Malloc(s) PyMem_Malloc(s)
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#define PyObject_Free(p) PyMem_Free(p)
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#define PyObject_Realloc(p) PyMem_Realloc(p)
|
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#endif
|
|
#if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX < 0x030400A1
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#define PyMem_RawMalloc(n) PyMem_Malloc(n)
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#define PyMem_RawRealloc(p, n) PyMem_Realloc(p, n)
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#define PyMem_RawFree(p) PyMem_Free(p)
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#endif
|
|
#if CYTHON_COMPILING_IN_PYSTON
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#define __Pyx_PyCode_HasFreeVars(co) PyCode_HasFreeVars(co)
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#define __Pyx_PyFrame_SetLineNumber(frame, lineno) PyFrame_SetLineNumber(frame, lineno)
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#else
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#define __Pyx_PyCode_HasFreeVars(co) (PyCode_GetNumFree(co) > 0)
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#define __Pyx_PyFrame_SetLineNumber(frame, lineno) (frame)->f_lineno = (lineno)
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#endif
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#if !CYTHON_FAST_THREAD_STATE || PY_VERSION_HEX < 0x02070000
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|
#define __Pyx_PyThreadState_Current PyThreadState_GET()
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#elif PY_VERSION_HEX >= 0x03060000
|
|
#define __Pyx_PyThreadState_Current _PyThreadState_UncheckedGet()
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|
#elif PY_VERSION_HEX >= 0x03000000
|
|
#define __Pyx_PyThreadState_Current PyThreadState_GET()
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#else
|
|
#define __Pyx_PyThreadState_Current _PyThreadState_Current
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#endif
|
|
#if PY_VERSION_HEX < 0x030700A2 && !defined(PyThread_tss_create) && !defined(Py_tss_NEEDS_INIT)
|
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#include "pythread.h"
|
|
#define Py_tss_NEEDS_INIT 0
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typedef int Py_tss_t;
|
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static CYTHON_INLINE int PyThread_tss_create(Py_tss_t *key) {
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*key = PyThread_create_key();
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return 0;
|
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}
|
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static CYTHON_INLINE Py_tss_t * PyThread_tss_alloc(void) {
|
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Py_tss_t *key = (Py_tss_t *)PyObject_Malloc(sizeof(Py_tss_t));
|
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*key = Py_tss_NEEDS_INIT;
|
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return key;
|
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}
|
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static CYTHON_INLINE void PyThread_tss_free(Py_tss_t *key) {
|
|
PyObject_Free(key);
|
|
}
|
|
static CYTHON_INLINE int PyThread_tss_is_created(Py_tss_t *key) {
|
|
return *key != Py_tss_NEEDS_INIT;
|
|
}
|
|
static CYTHON_INLINE void PyThread_tss_delete(Py_tss_t *key) {
|
|
PyThread_delete_key(*key);
|
|
*key = Py_tss_NEEDS_INIT;
|
|
}
|
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static CYTHON_INLINE int PyThread_tss_set(Py_tss_t *key, void *value) {
|
|
return PyThread_set_key_value(*key, value);
|
|
}
|
|
static CYTHON_INLINE void * PyThread_tss_get(Py_tss_t *key) {
|
|
return PyThread_get_key_value(*key);
|
|
}
|
|
#endif
|
|
#if CYTHON_COMPILING_IN_CPYTHON || defined(_PyDict_NewPresized)
|
|
#define __Pyx_PyDict_NewPresized(n) ((n <= 8) ? PyDict_New() : _PyDict_NewPresized(n))
|
|
#else
|
|
#define __Pyx_PyDict_NewPresized(n) PyDict_New()
|
|
#endif
|
|
#if PY_MAJOR_VERSION >= 3 || CYTHON_FUTURE_DIVISION
|
|
#define __Pyx_PyNumber_Divide(x,y) PyNumber_TrueDivide(x,y)
|
|
#define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceTrueDivide(x,y)
|
|
#else
|
|
#define __Pyx_PyNumber_Divide(x,y) PyNumber_Divide(x,y)
|
|
#define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceDivide(x,y)
|
|
#endif
|
|
#if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX >= 0x030500A1 && CYTHON_USE_UNICODE_INTERNALS
|
|
#define __Pyx_PyDict_GetItemStr(dict, name) _PyDict_GetItem_KnownHash(dict, name, ((PyASCIIObject *) name)->hash)
|
|
#else
|
|
#define __Pyx_PyDict_GetItemStr(dict, name) PyDict_GetItem(dict, name)
|
|
#endif
|
|
#if PY_VERSION_HEX > 0x03030000 && defined(PyUnicode_KIND)
|
|
#define CYTHON_PEP393_ENABLED 1
|
|
#define __Pyx_PyUnicode_READY(op) (likely(PyUnicode_IS_READY(op)) ?\
|
|
0 : _PyUnicode_Ready((PyObject *)(op)))
|
|
#define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_LENGTH(u)
|
|
#define __Pyx_PyUnicode_READ_CHAR(u, i) PyUnicode_READ_CHAR(u, i)
|
|
#define __Pyx_PyUnicode_MAX_CHAR_VALUE(u) PyUnicode_MAX_CHAR_VALUE(u)
|
|
#define __Pyx_PyUnicode_KIND(u) PyUnicode_KIND(u)
|
|
#define __Pyx_PyUnicode_DATA(u) PyUnicode_DATA(u)
|
|
#define __Pyx_PyUnicode_READ(k, d, i) PyUnicode_READ(k, d, i)
|
|
#define __Pyx_PyUnicode_WRITE(k, d, i, ch) PyUnicode_WRITE(k, d, i, ch)
|
|
#if defined(PyUnicode_IS_READY) && defined(PyUnicode_GET_SIZE)
|
|
#define __Pyx_PyUnicode_IS_TRUE(u) (0 != (likely(PyUnicode_IS_READY(u)) ? PyUnicode_GET_LENGTH(u) : PyUnicode_GET_SIZE(u)))
|
|
#else
|
|
#define __Pyx_PyUnicode_IS_TRUE(u) (0 != PyUnicode_GET_LENGTH(u))
|
|
#endif
|
|
#else
|
|
#define CYTHON_PEP393_ENABLED 0
|
|
#define PyUnicode_1BYTE_KIND 1
|
|
#define PyUnicode_2BYTE_KIND 2
|
|
#define PyUnicode_4BYTE_KIND 4
|
|
#define __Pyx_PyUnicode_READY(op) (0)
|
|
#define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_SIZE(u)
|
|
#define __Pyx_PyUnicode_READ_CHAR(u, i) ((Py_UCS4)(PyUnicode_AS_UNICODE(u)[i]))
|
|
#define __Pyx_PyUnicode_MAX_CHAR_VALUE(u) ((sizeof(Py_UNICODE) == 2) ? 65535 : 1114111)
|
|
#define __Pyx_PyUnicode_KIND(u) (sizeof(Py_UNICODE))
|
|
#define __Pyx_PyUnicode_DATA(u) ((void*)PyUnicode_AS_UNICODE(u))
|
|
#define __Pyx_PyUnicode_READ(k, d, i) ((void)(k), (Py_UCS4)(((Py_UNICODE*)d)[i]))
|
|
#define __Pyx_PyUnicode_WRITE(k, d, i, ch) (((void)(k)), ((Py_UNICODE*)d)[i] = ch)
|
|
#define __Pyx_PyUnicode_IS_TRUE(u) (0 != PyUnicode_GET_SIZE(u))
|
|
#endif
|
|
#if CYTHON_COMPILING_IN_PYPY
|
|
#define __Pyx_PyUnicode_Concat(a, b) PyNumber_Add(a, b)
|
|
#define __Pyx_PyUnicode_ConcatSafe(a, b) PyNumber_Add(a, b)
|
|
#else
|
|
#define __Pyx_PyUnicode_Concat(a, b) PyUnicode_Concat(a, b)
|
|
#define __Pyx_PyUnicode_ConcatSafe(a, b) ((unlikely((a) == Py_None) || unlikely((b) == Py_None)) ?\
|
|
PyNumber_Add(a, b) : __Pyx_PyUnicode_Concat(a, b))
|
|
#endif
|
|
#if CYTHON_COMPILING_IN_PYPY && !defined(PyUnicode_Contains)
|
|
#define PyUnicode_Contains(u, s) PySequence_Contains(u, s)
|
|
#endif
|
|
#if CYTHON_COMPILING_IN_PYPY && !defined(PyByteArray_Check)
|
|
#define PyByteArray_Check(obj) PyObject_TypeCheck(obj, &PyByteArray_Type)
|
|
#endif
|
|
#if CYTHON_COMPILING_IN_PYPY && !defined(PyObject_Format)
|
|
#define PyObject_Format(obj, fmt) PyObject_CallMethod(obj, "__format__", "O", fmt)
|
|
#endif
|
|
#define __Pyx_PyString_FormatSafe(a, b) ((unlikely((a) == Py_None || (PyString_Check(b) && !PyString_CheckExact(b)))) ? PyNumber_Remainder(a, b) : __Pyx_PyString_Format(a, b))
|
|
#define __Pyx_PyUnicode_FormatSafe(a, b) ((unlikely((a) == Py_None || (PyUnicode_Check(b) && !PyUnicode_CheckExact(b)))) ? PyNumber_Remainder(a, b) : PyUnicode_Format(a, b))
|
|
#if PY_MAJOR_VERSION >= 3
|
|
#define __Pyx_PyString_Format(a, b) PyUnicode_Format(a, b)
|
|
#else
|
|
#define __Pyx_PyString_Format(a, b) PyString_Format(a, b)
|
|
#endif
|
|
#if PY_MAJOR_VERSION < 3 && !defined(PyObject_ASCII)
|
|
#define PyObject_ASCII(o) PyObject_Repr(o)
|
|
#endif
|
|
#if PY_MAJOR_VERSION >= 3
|
|
#define PyBaseString_Type PyUnicode_Type
|
|
#define PyStringObject PyUnicodeObject
|
|
#define PyString_Type PyUnicode_Type
|
|
#define PyString_Check PyUnicode_Check
|
|
#define PyString_CheckExact PyUnicode_CheckExact
|
|
#ifndef PyObject_Unicode
|
|
#define PyObject_Unicode PyObject_Str
|
|
#endif
|
|
#endif
|
|
#if PY_MAJOR_VERSION >= 3
|
|
#define __Pyx_PyBaseString_Check(obj) PyUnicode_Check(obj)
|
|
#define __Pyx_PyBaseString_CheckExact(obj) PyUnicode_CheckExact(obj)
|
|
#else
|
|
#define __Pyx_PyBaseString_Check(obj) (PyString_Check(obj) || PyUnicode_Check(obj))
|
|
#define __Pyx_PyBaseString_CheckExact(obj) (PyString_CheckExact(obj) || PyUnicode_CheckExact(obj))
|
|
#endif
|
|
#ifndef PySet_CheckExact
|
|
#define PySet_CheckExact(obj) (Py_TYPE(obj) == &PySet_Type)
|
|
#endif
|
|
#if PY_VERSION_HEX >= 0x030900A4
|
|
#define __Pyx_SET_REFCNT(obj, refcnt) Py_SET_REFCNT(obj, refcnt)
|
|
#define __Pyx_SET_SIZE(obj, size) Py_SET_SIZE(obj, size)
|
|
#else
|
|
#define __Pyx_SET_REFCNT(obj, refcnt) Py_REFCNT(obj) = (refcnt)
|
|
#define __Pyx_SET_SIZE(obj, size) Py_SIZE(obj) = (size)
|
|
#endif
|
|
#if CYTHON_ASSUME_SAFE_MACROS
|
|
#define __Pyx_PySequence_SIZE(seq) Py_SIZE(seq)
|
|
#else
|
|
#define __Pyx_PySequence_SIZE(seq) PySequence_Size(seq)
|
|
#endif
|
|
#if PY_MAJOR_VERSION >= 3
|
|
#define PyIntObject PyLongObject
|
|
#define PyInt_Type PyLong_Type
|
|
#define PyInt_Check(op) PyLong_Check(op)
|
|
#define PyInt_CheckExact(op) PyLong_CheckExact(op)
|
|
#define PyInt_FromString PyLong_FromString
|
|
#define PyInt_FromUnicode PyLong_FromUnicode
|
|
#define PyInt_FromLong PyLong_FromLong
|
|
#define PyInt_FromSize_t PyLong_FromSize_t
|
|
#define PyInt_FromSsize_t PyLong_FromSsize_t
|
|
#define PyInt_AsLong PyLong_AsLong
|
|
#define PyInt_AS_LONG PyLong_AS_LONG
|
|
#define PyInt_AsSsize_t PyLong_AsSsize_t
|
|
#define PyInt_AsUnsignedLongMask PyLong_AsUnsignedLongMask
|
|
#define PyInt_AsUnsignedLongLongMask PyLong_AsUnsignedLongLongMask
|
|
#define PyNumber_Int PyNumber_Long
|
|
#endif
|
|
#if PY_MAJOR_VERSION >= 3
|
|
#define PyBoolObject PyLongObject
|
|
#endif
|
|
#if PY_MAJOR_VERSION >= 3 && CYTHON_COMPILING_IN_PYPY
|
|
#ifndef PyUnicode_InternFromString
|
|
#define PyUnicode_InternFromString(s) PyUnicode_FromString(s)
|
|
#endif
|
|
#endif
|
|
#if PY_VERSION_HEX < 0x030200A4
|
|
typedef long Py_hash_t;
|
|
#define __Pyx_PyInt_FromHash_t PyInt_FromLong
|
|
#define __Pyx_PyInt_AsHash_t PyInt_AsLong
|
|
#else
|
|
#define __Pyx_PyInt_FromHash_t PyInt_FromSsize_t
|
|
#define __Pyx_PyInt_AsHash_t PyInt_AsSsize_t
|
|
#endif
|
|
#if PY_MAJOR_VERSION >= 3
|
|
#define __Pyx_PyMethod_New(func, self, klass) ((self) ? ((void)(klass), PyMethod_New(func, self)) : __Pyx_NewRef(func))
|
|
#else
|
|
#define __Pyx_PyMethod_New(func, self, klass) PyMethod_New(func, self, klass)
|
|
#endif
|
|
#if CYTHON_USE_ASYNC_SLOTS
|
|
#if PY_VERSION_HEX >= 0x030500B1
|
|
#define __Pyx_PyAsyncMethodsStruct PyAsyncMethods
|
|
#define __Pyx_PyType_AsAsync(obj) (Py_TYPE(obj)->tp_as_async)
|
|
#else
|
|
#define __Pyx_PyType_AsAsync(obj) ((__Pyx_PyAsyncMethodsStruct*) (Py_TYPE(obj)->tp_reserved))
|
|
#endif
|
|
#else
|
|
#define __Pyx_PyType_AsAsync(obj) NULL
|
|
#endif
|
|
#ifndef __Pyx_PyAsyncMethodsStruct
|
|
typedef struct {
|
|
unaryfunc am_await;
|
|
unaryfunc am_aiter;
|
|
unaryfunc am_anext;
|
|
} __Pyx_PyAsyncMethodsStruct;
|
|
#endif
|
|
|
|
#if defined(WIN32) || defined(MS_WINDOWS)
|
|
#define _USE_MATH_DEFINES
|
|
#endif
|
|
#include <math.h>
|
|
#ifdef NAN
|
|
#define __PYX_NAN() ((float) NAN)
|
|
#else
|
|
static CYTHON_INLINE float __PYX_NAN() {
|
|
float value;
|
|
memset(&value, 0xFF, sizeof(value));
|
|
return value;
|
|
}
|
|
#endif
|
|
#if defined(__CYGWIN__) && defined(_LDBL_EQ_DBL)
|
|
#define __Pyx_truncl trunc
|
|
#else
|
|
#define __Pyx_truncl truncl
|
|
#endif
|
|
|
|
#define __PYX_MARK_ERR_POS(f_index, lineno) \
|
|
{ __pyx_filename = __pyx_f[f_index]; (void)__pyx_filename; __pyx_lineno = lineno; (void)__pyx_lineno; __pyx_clineno = __LINE__; (void)__pyx_clineno; }
|
|
#define __PYX_ERR(f_index, lineno, Ln_error) \
|
|
{ __PYX_MARK_ERR_POS(f_index, lineno) goto Ln_error; }
|
|
|
|
#ifndef __PYX_EXTERN_C
|
|
#ifdef __cplusplus
|
|
#define __PYX_EXTERN_C extern "C"
|
|
#else
|
|
#define __PYX_EXTERN_C extern
|
|
#endif
|
|
#endif
|
|
|
|
#define __PYX_HAVE__GPy__models__state_space_cython
|
|
#define __PYX_HAVE_API__GPy__models__state_space_cython
|
|
/* Early includes */
|
|
#include <string.h>
|
|
#include <stdio.h>
|
|
#include "numpy/arrayobject.h"
|
|
#include "numpy/ndarrayobject.h"
|
|
#include "numpy/ndarraytypes.h"
|
|
#include "numpy/arrayscalars.h"
|
|
#include "numpy/ufuncobject.h"
|
|
|
|
/* NumPy API declarations from "numpy/__init__.pxd" */
|
|
|
|
#include "numpy/npy_math.h"
|
|
#ifdef _OPENMP
|
|
#include <omp.h>
|
|
#endif /* _OPENMP */
|
|
|
|
#if defined(PYREX_WITHOUT_ASSERTIONS) && !defined(CYTHON_WITHOUT_ASSERTIONS)
|
|
#define CYTHON_WITHOUT_ASSERTIONS
|
|
#endif
|
|
|
|
typedef struct {PyObject **p; const char *s; const Py_ssize_t n; const char* encoding;
|
|
const char is_unicode; const char is_str; const char intern; } __Pyx_StringTabEntry;
|
|
|
|
#define __PYX_DEFAULT_STRING_ENCODING_IS_ASCII 0
|
|
#define __PYX_DEFAULT_STRING_ENCODING_IS_UTF8 0
|
|
#define __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT (PY_MAJOR_VERSION >= 3 && __PYX_DEFAULT_STRING_ENCODING_IS_UTF8)
|
|
#define __PYX_DEFAULT_STRING_ENCODING ""
|
|
#define __Pyx_PyObject_FromString __Pyx_PyBytes_FromString
|
|
#define __Pyx_PyObject_FromStringAndSize __Pyx_PyBytes_FromStringAndSize
|
|
#define __Pyx_uchar_cast(c) ((unsigned char)c)
|
|
#define __Pyx_long_cast(x) ((long)x)
|
|
#define __Pyx_fits_Py_ssize_t(v, type, is_signed) (\
|
|
(sizeof(type) < sizeof(Py_ssize_t)) ||\
|
|
(sizeof(type) > sizeof(Py_ssize_t) &&\
|
|
likely(v < (type)PY_SSIZE_T_MAX ||\
|
|
v == (type)PY_SSIZE_T_MAX) &&\
|
|
(!is_signed || likely(v > (type)PY_SSIZE_T_MIN ||\
|
|
v == (type)PY_SSIZE_T_MIN))) ||\
|
|
(sizeof(type) == sizeof(Py_ssize_t) &&\
|
|
(is_signed || likely(v < (type)PY_SSIZE_T_MAX ||\
|
|
v == (type)PY_SSIZE_T_MAX))) )
|
|
static CYTHON_INLINE int __Pyx_is_valid_index(Py_ssize_t i, Py_ssize_t limit) {
|
|
return (size_t) i < (size_t) limit;
|
|
}
|
|
#if defined (__cplusplus) && __cplusplus >= 201103L
|
|
#include <cstdlib>
|
|
#define __Pyx_sst_abs(value) std::abs(value)
|
|
#elif SIZEOF_INT >= SIZEOF_SIZE_T
|
|
#define __Pyx_sst_abs(value) abs(value)
|
|
#elif SIZEOF_LONG >= SIZEOF_SIZE_T
|
|
#define __Pyx_sst_abs(value) labs(value)
|
|
#elif defined (_MSC_VER)
|
|
#define __Pyx_sst_abs(value) ((Py_ssize_t)_abs64(value))
|
|
#elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L
|
|
#define __Pyx_sst_abs(value) llabs(value)
|
|
#elif defined (__GNUC__)
|
|
#define __Pyx_sst_abs(value) __builtin_llabs(value)
|
|
#else
|
|
#define __Pyx_sst_abs(value) ((value<0) ? -value : value)
|
|
#endif
|
|
static CYTHON_INLINE const char* __Pyx_PyObject_AsString(PyObject*);
|
|
static CYTHON_INLINE const char* __Pyx_PyObject_AsStringAndSize(PyObject*, Py_ssize_t* length);
|
|
#define __Pyx_PyByteArray_FromString(s) PyByteArray_FromStringAndSize((const char*)s, strlen((const char*)s))
|
|
#define __Pyx_PyByteArray_FromStringAndSize(s, l) PyByteArray_FromStringAndSize((const char*)s, l)
|
|
#define __Pyx_PyBytes_FromString PyBytes_FromString
|
|
#define __Pyx_PyBytes_FromStringAndSize PyBytes_FromStringAndSize
|
|
static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(const char*);
|
|
#if PY_MAJOR_VERSION < 3
|
|
#define __Pyx_PyStr_FromString __Pyx_PyBytes_FromString
|
|
#define __Pyx_PyStr_FromStringAndSize __Pyx_PyBytes_FromStringAndSize
|
|
#else
|
|
#define __Pyx_PyStr_FromString __Pyx_PyUnicode_FromString
|
|
#define __Pyx_PyStr_FromStringAndSize __Pyx_PyUnicode_FromStringAndSize
|
|
#endif
|
|
#define __Pyx_PyBytes_AsWritableString(s) ((char*) PyBytes_AS_STRING(s))
|
|
#define __Pyx_PyBytes_AsWritableSString(s) ((signed char*) PyBytes_AS_STRING(s))
|
|
#define __Pyx_PyBytes_AsWritableUString(s) ((unsigned char*) PyBytes_AS_STRING(s))
|
|
#define __Pyx_PyBytes_AsString(s) ((const char*) PyBytes_AS_STRING(s))
|
|
#define __Pyx_PyBytes_AsSString(s) ((const signed char*) PyBytes_AS_STRING(s))
|
|
#define __Pyx_PyBytes_AsUString(s) ((const unsigned char*) PyBytes_AS_STRING(s))
|
|
#define __Pyx_PyObject_AsWritableString(s) ((char*) __Pyx_PyObject_AsString(s))
|
|
#define __Pyx_PyObject_AsWritableSString(s) ((signed char*) __Pyx_PyObject_AsString(s))
|
|
#define __Pyx_PyObject_AsWritableUString(s) ((unsigned char*) __Pyx_PyObject_AsString(s))
|
|
#define __Pyx_PyObject_AsSString(s) ((const signed char*) __Pyx_PyObject_AsString(s))
|
|
#define __Pyx_PyObject_AsUString(s) ((const unsigned char*) __Pyx_PyObject_AsString(s))
|
|
#define __Pyx_PyObject_FromCString(s) __Pyx_PyObject_FromString((const char*)s)
|
|
#define __Pyx_PyBytes_FromCString(s) __Pyx_PyBytes_FromString((const char*)s)
|
|
#define __Pyx_PyByteArray_FromCString(s) __Pyx_PyByteArray_FromString((const char*)s)
|
|
#define __Pyx_PyStr_FromCString(s) __Pyx_PyStr_FromString((const char*)s)
|
|
#define __Pyx_PyUnicode_FromCString(s) __Pyx_PyUnicode_FromString((const char*)s)
|
|
static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u) {
|
|
const Py_UNICODE *u_end = u;
|
|
while (*u_end++) ;
|
|
return (size_t)(u_end - u - 1);
|
|
}
|
|
#define __Pyx_PyUnicode_FromUnicode(u) PyUnicode_FromUnicode(u, __Pyx_Py_UNICODE_strlen(u))
|
|
#define __Pyx_PyUnicode_FromUnicodeAndLength PyUnicode_FromUnicode
|
|
#define __Pyx_PyUnicode_AsUnicode PyUnicode_AsUnicode
|
|
#define __Pyx_NewRef(obj) (Py_INCREF(obj), obj)
|
|
#define __Pyx_Owned_Py_None(b) __Pyx_NewRef(Py_None)
|
|
static CYTHON_INLINE PyObject * __Pyx_PyBool_FromLong(long b);
|
|
static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject*);
|
|
static CYTHON_INLINE int __Pyx_PyObject_IsTrueAndDecref(PyObject*);
|
|
static CYTHON_INLINE PyObject* __Pyx_PyNumber_IntOrLong(PyObject* x);
|
|
#define __Pyx_PySequence_Tuple(obj)\
|
|
(likely(PyTuple_CheckExact(obj)) ? __Pyx_NewRef(obj) : PySequence_Tuple(obj))
|
|
static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject*);
|
|
static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t);
|
|
#if CYTHON_ASSUME_SAFE_MACROS
|
|
#define __pyx_PyFloat_AsDouble(x) (PyFloat_CheckExact(x) ? PyFloat_AS_DOUBLE(x) : PyFloat_AsDouble(x))
|
|
#else
|
|
#define __pyx_PyFloat_AsDouble(x) PyFloat_AsDouble(x)
|
|
#endif
|
|
#define __pyx_PyFloat_AsFloat(x) ((float) __pyx_PyFloat_AsDouble(x))
|
|
#if PY_MAJOR_VERSION >= 3
|
|
#define __Pyx_PyNumber_Int(x) (PyLong_CheckExact(x) ? __Pyx_NewRef(x) : PyNumber_Long(x))
|
|
#else
|
|
#define __Pyx_PyNumber_Int(x) (PyInt_CheckExact(x) ? __Pyx_NewRef(x) : PyNumber_Int(x))
|
|
#endif
|
|
#define __Pyx_PyNumber_Float(x) (PyFloat_CheckExact(x) ? __Pyx_NewRef(x) : PyNumber_Float(x))
|
|
#if PY_MAJOR_VERSION < 3 && __PYX_DEFAULT_STRING_ENCODING_IS_ASCII
|
|
static int __Pyx_sys_getdefaultencoding_not_ascii;
|
|
static int __Pyx_init_sys_getdefaultencoding_params(void) {
|
|
PyObject* sys;
|
|
PyObject* default_encoding = NULL;
|
|
PyObject* ascii_chars_u = NULL;
|
|
PyObject* ascii_chars_b = NULL;
|
|
const char* default_encoding_c;
|
|
sys = PyImport_ImportModule("sys");
|
|
if (!sys) goto bad;
|
|
default_encoding = PyObject_CallMethod(sys, (char*) "getdefaultencoding", NULL);
|
|
Py_DECREF(sys);
|
|
if (!default_encoding) goto bad;
|
|
default_encoding_c = PyBytes_AsString(default_encoding);
|
|
if (!default_encoding_c) goto bad;
|
|
if (strcmp(default_encoding_c, "ascii") == 0) {
|
|
__Pyx_sys_getdefaultencoding_not_ascii = 0;
|
|
} else {
|
|
char ascii_chars[128];
|
|
int c;
|
|
for (c = 0; c < 128; c++) {
|
|
ascii_chars[c] = c;
|
|
}
|
|
__Pyx_sys_getdefaultencoding_not_ascii = 1;
|
|
ascii_chars_u = PyUnicode_DecodeASCII(ascii_chars, 128, NULL);
|
|
if (!ascii_chars_u) goto bad;
|
|
ascii_chars_b = PyUnicode_AsEncodedString(ascii_chars_u, default_encoding_c, NULL);
|
|
if (!ascii_chars_b || !PyBytes_Check(ascii_chars_b) || memcmp(ascii_chars, PyBytes_AS_STRING(ascii_chars_b), 128) != 0) {
|
|
PyErr_Format(
|
|
PyExc_ValueError,
|
|
"This module compiled with c_string_encoding=ascii, but default encoding '%.200s' is not a superset of ascii.",
|
|
default_encoding_c);
|
|
goto bad;
|
|
}
|
|
Py_DECREF(ascii_chars_u);
|
|
Py_DECREF(ascii_chars_b);
|
|
}
|
|
Py_DECREF(default_encoding);
|
|
return 0;
|
|
bad:
|
|
Py_XDECREF(default_encoding);
|
|
Py_XDECREF(ascii_chars_u);
|
|
Py_XDECREF(ascii_chars_b);
|
|
return -1;
|
|
}
|
|
#endif
|
|
#if __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT && PY_MAJOR_VERSION >= 3
|
|
#define __Pyx_PyUnicode_FromStringAndSize(c_str, size) PyUnicode_DecodeUTF8(c_str, size, NULL)
|
|
#else
|
|
#define __Pyx_PyUnicode_FromStringAndSize(c_str, size) PyUnicode_Decode(c_str, size, __PYX_DEFAULT_STRING_ENCODING, NULL)
|
|
#if __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT
|
|
static char* __PYX_DEFAULT_STRING_ENCODING;
|
|
static int __Pyx_init_sys_getdefaultencoding_params(void) {
|
|
PyObject* sys;
|
|
PyObject* default_encoding = NULL;
|
|
char* default_encoding_c;
|
|
sys = PyImport_ImportModule("sys");
|
|
if (!sys) goto bad;
|
|
default_encoding = PyObject_CallMethod(sys, (char*) (const char*) "getdefaultencoding", NULL);
|
|
Py_DECREF(sys);
|
|
if (!default_encoding) goto bad;
|
|
default_encoding_c = PyBytes_AsString(default_encoding);
|
|
if (!default_encoding_c) goto bad;
|
|
__PYX_DEFAULT_STRING_ENCODING = (char*) malloc(strlen(default_encoding_c) + 1);
|
|
if (!__PYX_DEFAULT_STRING_ENCODING) goto bad;
|
|
strcpy(__PYX_DEFAULT_STRING_ENCODING, default_encoding_c);
|
|
Py_DECREF(default_encoding);
|
|
return 0;
|
|
bad:
|
|
Py_XDECREF(default_encoding);
|
|
return -1;
|
|
}
|
|
#endif
|
|
#endif
|
|
|
|
|
|
/* Test for GCC > 2.95 */
|
|
#if defined(__GNUC__) && (__GNUC__ > 2 || (__GNUC__ == 2 && (__GNUC_MINOR__ > 95)))
|
|
#define likely(x) __builtin_expect(!!(x), 1)
|
|
#define unlikely(x) __builtin_expect(!!(x), 0)
|
|
#else /* !__GNUC__ or GCC < 2.95 */
|
|
#define likely(x) (x)
|
|
#define unlikely(x) (x)
|
|
#endif /* __GNUC__ */
|
|
static CYTHON_INLINE void __Pyx_pretend_to_initialize(void* ptr) { (void)ptr; }
|
|
|
|
static PyObject *__pyx_m = NULL;
|
|
static PyObject *__pyx_d;
|
|
static PyObject *__pyx_b;
|
|
static PyObject *__pyx_cython_runtime = NULL;
|
|
static PyObject *__pyx_empty_tuple;
|
|
static PyObject *__pyx_empty_bytes;
|
|
static PyObject *__pyx_empty_unicode;
|
|
static int __pyx_lineno;
|
|
static int __pyx_clineno = 0;
|
|
static const char * __pyx_cfilenm= __FILE__;
|
|
static const char *__pyx_filename;
|
|
|
|
/* Header.proto */
|
|
#if !defined(CYTHON_CCOMPLEX)
|
|
#if defined(__cplusplus)
|
|
#define CYTHON_CCOMPLEX 1
|
|
#elif defined(_Complex_I)
|
|
#define CYTHON_CCOMPLEX 1
|
|
#else
|
|
#define CYTHON_CCOMPLEX 0
|
|
#endif
|
|
#endif
|
|
#if CYTHON_CCOMPLEX
|
|
#ifdef __cplusplus
|
|
#include <complex>
|
|
#else
|
|
#include <complex.h>
|
|
#endif
|
|
#endif
|
|
#if CYTHON_CCOMPLEX && !defined(__cplusplus) && defined(__sun__) && defined(__GNUC__)
|
|
#undef _Complex_I
|
|
#define _Complex_I 1.0fj
|
|
#endif
|
|
|
|
|
|
static const char *__pyx_f[] = {
|
|
"GPy/models/state_space_cython.pyx",
|
|
"stringsource",
|
|
"__init__.pxd",
|
|
"type.pxd",
|
|
};
|
|
/* BufferFormatStructs.proto */
|
|
#define IS_UNSIGNED(type) (((type) -1) > 0)
|
|
struct __Pyx_StructField_;
|
|
#define __PYX_BUF_FLAGS_PACKED_STRUCT (1 << 0)
|
|
typedef struct {
|
|
const char* name;
|
|
struct __Pyx_StructField_* fields;
|
|
size_t size;
|
|
size_t arraysize[8];
|
|
int ndim;
|
|
char typegroup;
|
|
char is_unsigned;
|
|
int flags;
|
|
} __Pyx_TypeInfo;
|
|
typedef struct __Pyx_StructField_ {
|
|
__Pyx_TypeInfo* type;
|
|
const char* name;
|
|
size_t offset;
|
|
} __Pyx_StructField;
|
|
typedef struct {
|
|
__Pyx_StructField* field;
|
|
size_t parent_offset;
|
|
} __Pyx_BufFmt_StackElem;
|
|
typedef struct {
|
|
__Pyx_StructField root;
|
|
__Pyx_BufFmt_StackElem* head;
|
|
size_t fmt_offset;
|
|
size_t new_count, enc_count;
|
|
size_t struct_alignment;
|
|
int is_complex;
|
|
char enc_type;
|
|
char new_packmode;
|
|
char enc_packmode;
|
|
char is_valid_array;
|
|
} __Pyx_BufFmt_Context;
|
|
|
|
|
|
/* "../../.pyenv/versions/gpy391/lib/python3.9/site-packages/numpy/__init__.pxd":690
|
|
* # in Cython to enable them only on the right systems.
|
|
*
|
|
* ctypedef npy_int8 int8_t # <<<<<<<<<<<<<<
|
|
* ctypedef npy_int16 int16_t
|
|
* ctypedef npy_int32 int32_t
|
|
*/
|
|
typedef npy_int8 __pyx_t_5numpy_int8_t;
|
|
|
|
/* "../../.pyenv/versions/gpy391/lib/python3.9/site-packages/numpy/__init__.pxd":691
|
|
*
|
|
* ctypedef npy_int8 int8_t
|
|
* ctypedef npy_int16 int16_t # <<<<<<<<<<<<<<
|
|
* ctypedef npy_int32 int32_t
|
|
* ctypedef npy_int64 int64_t
|
|
*/
|
|
typedef npy_int16 __pyx_t_5numpy_int16_t;
|
|
|
|
/* "../../.pyenv/versions/gpy391/lib/python3.9/site-packages/numpy/__init__.pxd":692
|
|
* ctypedef npy_int8 int8_t
|
|
* ctypedef npy_int16 int16_t
|
|
* ctypedef npy_int32 int32_t # <<<<<<<<<<<<<<
|
|
* ctypedef npy_int64 int64_t
|
|
* #ctypedef npy_int96 int96_t
|
|
*/
|
|
typedef npy_int32 __pyx_t_5numpy_int32_t;
|
|
|
|
/* "../../.pyenv/versions/gpy391/lib/python3.9/site-packages/numpy/__init__.pxd":693
|
|
* ctypedef npy_int16 int16_t
|
|
* ctypedef npy_int32 int32_t
|
|
* ctypedef npy_int64 int64_t # <<<<<<<<<<<<<<
|
|
* #ctypedef npy_int96 int96_t
|
|
* #ctypedef npy_int128 int128_t
|
|
*/
|
|
typedef npy_int64 __pyx_t_5numpy_int64_t;
|
|
|
|
/* "../../.pyenv/versions/gpy391/lib/python3.9/site-packages/numpy/__init__.pxd":697
|
|
* #ctypedef npy_int128 int128_t
|
|
*
|
|
* ctypedef npy_uint8 uint8_t # <<<<<<<<<<<<<<
|
|
* ctypedef npy_uint16 uint16_t
|
|
* ctypedef npy_uint32 uint32_t
|
|
*/
|
|
typedef npy_uint8 __pyx_t_5numpy_uint8_t;
|
|
|
|
/* "../../.pyenv/versions/gpy391/lib/python3.9/site-packages/numpy/__init__.pxd":698
|
|
*
|
|
* ctypedef npy_uint8 uint8_t
|
|
* ctypedef npy_uint16 uint16_t # <<<<<<<<<<<<<<
|
|
* ctypedef npy_uint32 uint32_t
|
|
* ctypedef npy_uint64 uint64_t
|
|
*/
|
|
typedef npy_uint16 __pyx_t_5numpy_uint16_t;
|
|
|
|
/* "../../.pyenv/versions/gpy391/lib/python3.9/site-packages/numpy/__init__.pxd":699
|
|
* ctypedef npy_uint8 uint8_t
|
|
* ctypedef npy_uint16 uint16_t
|
|
* ctypedef npy_uint32 uint32_t # <<<<<<<<<<<<<<
|
|
* ctypedef npy_uint64 uint64_t
|
|
* #ctypedef npy_uint96 uint96_t
|
|
*/
|
|
typedef npy_uint32 __pyx_t_5numpy_uint32_t;
|
|
|
|
/* "../../.pyenv/versions/gpy391/lib/python3.9/site-packages/numpy/__init__.pxd":700
|
|
* ctypedef npy_uint16 uint16_t
|
|
* ctypedef npy_uint32 uint32_t
|
|
* ctypedef npy_uint64 uint64_t # <<<<<<<<<<<<<<
|
|
* #ctypedef npy_uint96 uint96_t
|
|
* #ctypedef npy_uint128 uint128_t
|
|
*/
|
|
typedef npy_uint64 __pyx_t_5numpy_uint64_t;
|
|
|
|
/* "../../.pyenv/versions/gpy391/lib/python3.9/site-packages/numpy/__init__.pxd":704
|
|
* #ctypedef npy_uint128 uint128_t
|
|
*
|
|
* ctypedef npy_float32 float32_t # <<<<<<<<<<<<<<
|
|
* ctypedef npy_float64 float64_t
|
|
* #ctypedef npy_float80 float80_t
|
|
*/
|
|
typedef npy_float32 __pyx_t_5numpy_float32_t;
|
|
|
|
/* "../../.pyenv/versions/gpy391/lib/python3.9/site-packages/numpy/__init__.pxd":705
|
|
*
|
|
* ctypedef npy_float32 float32_t
|
|
* ctypedef npy_float64 float64_t # <<<<<<<<<<<<<<
|
|
* #ctypedef npy_float80 float80_t
|
|
* #ctypedef npy_float128 float128_t
|
|
*/
|
|
typedef npy_float64 __pyx_t_5numpy_float64_t;
|
|
|
|
/* "../../.pyenv/versions/gpy391/lib/python3.9/site-packages/numpy/__init__.pxd":714
|
|
* # The int types are mapped a bit surprising --
|
|
* # numpy.int corresponds to 'l' and numpy.long to 'q'
|
|
* ctypedef npy_long int_t # <<<<<<<<<<<<<<
|
|
* ctypedef npy_longlong long_t
|
|
* ctypedef npy_longlong longlong_t
|
|
*/
|
|
typedef npy_long __pyx_t_5numpy_int_t;
|
|
|
|
/* "../../.pyenv/versions/gpy391/lib/python3.9/site-packages/numpy/__init__.pxd":715
|
|
* # numpy.int corresponds to 'l' and numpy.long to 'q'
|
|
* ctypedef npy_long int_t
|
|
* ctypedef npy_longlong long_t # <<<<<<<<<<<<<<
|
|
* ctypedef npy_longlong longlong_t
|
|
*
|
|
*/
|
|
typedef npy_longlong __pyx_t_5numpy_long_t;
|
|
|
|
/* "../../.pyenv/versions/gpy391/lib/python3.9/site-packages/numpy/__init__.pxd":716
|
|
* ctypedef npy_long int_t
|
|
* ctypedef npy_longlong long_t
|
|
* ctypedef npy_longlong longlong_t # <<<<<<<<<<<<<<
|
|
*
|
|
* ctypedef npy_ulong uint_t
|
|
*/
|
|
typedef npy_longlong __pyx_t_5numpy_longlong_t;
|
|
|
|
/* "../../.pyenv/versions/gpy391/lib/python3.9/site-packages/numpy/__init__.pxd":718
|
|
* ctypedef npy_longlong longlong_t
|
|
*
|
|
* ctypedef npy_ulong uint_t # <<<<<<<<<<<<<<
|
|
* ctypedef npy_ulonglong ulong_t
|
|
* ctypedef npy_ulonglong ulonglong_t
|
|
*/
|
|
typedef npy_ulong __pyx_t_5numpy_uint_t;
|
|
|
|
/* "../../.pyenv/versions/gpy391/lib/python3.9/site-packages/numpy/__init__.pxd":719
|
|
*
|
|
* ctypedef npy_ulong uint_t
|
|
* ctypedef npy_ulonglong ulong_t # <<<<<<<<<<<<<<
|
|
* ctypedef npy_ulonglong ulonglong_t
|
|
*
|
|
*/
|
|
typedef npy_ulonglong __pyx_t_5numpy_ulong_t;
|
|
|
|
/* "../../.pyenv/versions/gpy391/lib/python3.9/site-packages/numpy/__init__.pxd":720
|
|
* ctypedef npy_ulong uint_t
|
|
* ctypedef npy_ulonglong ulong_t
|
|
* ctypedef npy_ulonglong ulonglong_t # <<<<<<<<<<<<<<
|
|
*
|
|
* ctypedef npy_intp intp_t
|
|
*/
|
|
typedef npy_ulonglong __pyx_t_5numpy_ulonglong_t;
|
|
|
|
/* "../../.pyenv/versions/gpy391/lib/python3.9/site-packages/numpy/__init__.pxd":722
|
|
* ctypedef npy_ulonglong ulonglong_t
|
|
*
|
|
* ctypedef npy_intp intp_t # <<<<<<<<<<<<<<
|
|
* ctypedef npy_uintp uintp_t
|
|
*
|
|
*/
|
|
typedef npy_intp __pyx_t_5numpy_intp_t;
|
|
|
|
/* "../../.pyenv/versions/gpy391/lib/python3.9/site-packages/numpy/__init__.pxd":723
|
|
*
|
|
* ctypedef npy_intp intp_t
|
|
* ctypedef npy_uintp uintp_t # <<<<<<<<<<<<<<
|
|
*
|
|
* ctypedef npy_double float_t
|
|
*/
|
|
typedef npy_uintp __pyx_t_5numpy_uintp_t;
|
|
|
|
/* "../../.pyenv/versions/gpy391/lib/python3.9/site-packages/numpy/__init__.pxd":725
|
|
* ctypedef npy_uintp uintp_t
|
|
*
|
|
* ctypedef npy_double float_t # <<<<<<<<<<<<<<
|
|
* ctypedef npy_double double_t
|
|
* ctypedef npy_longdouble longdouble_t
|
|
*/
|
|
typedef npy_double __pyx_t_5numpy_float_t;
|
|
|
|
/* "../../.pyenv/versions/gpy391/lib/python3.9/site-packages/numpy/__init__.pxd":726
|
|
*
|
|
* ctypedef npy_double float_t
|
|
* ctypedef npy_double double_t # <<<<<<<<<<<<<<
|
|
* ctypedef npy_longdouble longdouble_t
|
|
*
|
|
*/
|
|
typedef npy_double __pyx_t_5numpy_double_t;
|
|
|
|
/* "../../.pyenv/versions/gpy391/lib/python3.9/site-packages/numpy/__init__.pxd":727
|
|
* ctypedef npy_double float_t
|
|
* ctypedef npy_double double_t
|
|
* ctypedef npy_longdouble longdouble_t # <<<<<<<<<<<<<<
|
|
*
|
|
* ctypedef npy_cfloat cfloat_t
|
|
*/
|
|
typedef npy_longdouble __pyx_t_5numpy_longdouble_t;
|
|
|
|
/* "GPy/models/state_space_cython.pyx":17
|
|
* DTYPE_int = np.int64
|
|
*
|
|
* ctypedef np.float64_t DTYPE_t # <<<<<<<<<<<<<<
|
|
* ctypedef np.int64_t DTYPE_int_t
|
|
*
|
|
*/
|
|
typedef __pyx_t_5numpy_float64_t __pyx_t_3GPy_6models_18state_space_cython_DTYPE_t;
|
|
|
|
/* "GPy/models/state_space_cython.pyx":18
|
|
*
|
|
* ctypedef np.float64_t DTYPE_t
|
|
* ctypedef np.int64_t DTYPE_int_t # <<<<<<<<<<<<<<
|
|
*
|
|
* # Template class for dynamic callables
|
|
*/
|
|
typedef __pyx_t_5numpy_int64_t __pyx_t_3GPy_6models_18state_space_cython_DTYPE_int_t;
|
|
/* Declarations.proto */
|
|
#if CYTHON_CCOMPLEX
|
|
#ifdef __cplusplus
|
|
typedef ::std::complex< float > __pyx_t_float_complex;
|
|
#else
|
|
typedef float _Complex __pyx_t_float_complex;
|
|
#endif
|
|
#else
|
|
typedef struct { float real, imag; } __pyx_t_float_complex;
|
|
#endif
|
|
static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float, float);
|
|
|
|
/* Declarations.proto */
|
|
#if CYTHON_CCOMPLEX
|
|
#ifdef __cplusplus
|
|
typedef ::std::complex< double > __pyx_t_double_complex;
|
|
#else
|
|
typedef double _Complex __pyx_t_double_complex;
|
|
#endif
|
|
#else
|
|
typedef struct { double real, imag; } __pyx_t_double_complex;
|
|
#endif
|
|
static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double, double);
|
|
|
|
|
|
/*--- Type declarations ---*/
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython;
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython;
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython;
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython;
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython;
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython;
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython;
|
|
|
|
/* "../../.pyenv/versions/gpy391/lib/python3.9/site-packages/numpy/__init__.pxd":729
|
|
* ctypedef npy_longdouble longdouble_t
|
|
*
|
|
* ctypedef npy_cfloat cfloat_t # <<<<<<<<<<<<<<
|
|
* ctypedef npy_cdouble cdouble_t
|
|
* ctypedef npy_clongdouble clongdouble_t
|
|
*/
|
|
typedef npy_cfloat __pyx_t_5numpy_cfloat_t;
|
|
|
|
/* "../../.pyenv/versions/gpy391/lib/python3.9/site-packages/numpy/__init__.pxd":730
|
|
*
|
|
* ctypedef npy_cfloat cfloat_t
|
|
* ctypedef npy_cdouble cdouble_t # <<<<<<<<<<<<<<
|
|
* ctypedef npy_clongdouble clongdouble_t
|
|
*
|
|
*/
|
|
typedef npy_cdouble __pyx_t_5numpy_cdouble_t;
|
|
|
|
/* "../../.pyenv/versions/gpy391/lib/python3.9/site-packages/numpy/__init__.pxd":731
|
|
* ctypedef npy_cfloat cfloat_t
|
|
* ctypedef npy_cdouble cdouble_t
|
|
* ctypedef npy_clongdouble clongdouble_t # <<<<<<<<<<<<<<
|
|
*
|
|
* ctypedef npy_cdouble complex_t
|
|
*/
|
|
typedef npy_clongdouble __pyx_t_5numpy_clongdouble_t;
|
|
|
|
/* "../../.pyenv/versions/gpy391/lib/python3.9/site-packages/numpy/__init__.pxd":733
|
|
* ctypedef npy_clongdouble clongdouble_t
|
|
*
|
|
* ctypedef npy_cdouble complex_t # <<<<<<<<<<<<<<
|
|
*
|
|
* cdef inline object PyArray_MultiIterNew1(a):
|
|
*/
|
|
typedef npy_cdouble __pyx_t_5numpy_complex_t;
|
|
struct __pyx_opt_args_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_reset;
|
|
struct __pyx_opt_args_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_reset;
|
|
struct __pyx_opt_args_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_reset;
|
|
struct __pyx_opt_args_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_reset;
|
|
struct __pyx_opt_args_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_Q_inverse;
|
|
|
|
/* "GPy/models/state_space_cython.pyx":40
|
|
* raise NotImplemented("(cython) dQk is not implemented!")
|
|
*
|
|
* cpdef reset(self, bint compute_derivatives = False): # <<<<<<<<<<<<<<
|
|
* raise NotImplemented("(cython) reset is not implemented!")
|
|
*
|
|
*/
|
|
struct __pyx_opt_args_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_reset {
|
|
int __pyx_n;
|
|
int compute_derivatives;
|
|
};
|
|
|
|
/* "GPy/models/state_space_cython.pyx":63
|
|
* raise NotImplemented("(cython) dQk is not implemented!")
|
|
*
|
|
* cpdef reset(self,compute_derivatives = False): # <<<<<<<<<<<<<<
|
|
* raise NotImplemented("(cython) reset is not implemented!")
|
|
*
|
|
*/
|
|
struct __pyx_opt_args_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_reset {
|
|
int __pyx_n;
|
|
PyObject *compute_derivatives;
|
|
};
|
|
|
|
/* "GPy/models/state_space_cython.pyx":365
|
|
*
|
|
*
|
|
* cpdef reset(self, bint compute_derivatives=False): # <<<<<<<<<<<<<<
|
|
* """
|
|
* For reusing this object e.g. in smoother computation. It makes sence
|
|
*/
|
|
struct __pyx_opt_args_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_reset {
|
|
int __pyx_n;
|
|
int compute_derivatives;
|
|
};
|
|
|
|
/* "GPy/models/state_space_cython.pyx":446
|
|
* return np.dot(A, m) # default dynamic model
|
|
*
|
|
* cpdef reset(self, bint compute_derivatives=False): # <<<<<<<<<<<<<<
|
|
* """
|
|
* For reusing this object e.g. in smoother computation. It makes sence
|
|
*/
|
|
struct __pyx_opt_args_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_reset {
|
|
int __pyx_n;
|
|
int compute_derivatives;
|
|
};
|
|
|
|
/* "GPy/models/state_space_cython.pyx":501
|
|
*
|
|
*
|
|
* cpdef Q_inverse(self, int k, float jitter=0.0): # <<<<<<<<<<<<<<
|
|
* """
|
|
* Square root of the noise matrix Q
|
|
*/
|
|
struct __pyx_opt_args_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_Q_inverse {
|
|
int __pyx_n;
|
|
float jitter;
|
|
};
|
|
|
|
/* "GPy/models/state_space_cython.pyx":21
|
|
*
|
|
* # Template class for dynamic callables
|
|
* cdef class Dynamic_Callables_Cython: # <<<<<<<<<<<<<<
|
|
* cpdef f_a(self, int k, np.ndarray[DTYPE_t, ndim=2] m, np.ndarray[DTYPE_t, ndim=2] A):
|
|
* raise NotImplemented("(cython) f_a is not implemented!")
|
|
*/
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython {
|
|
PyObject_HEAD
|
|
struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_vtab;
|
|
};
|
|
|
|
|
|
/* "GPy/models/state_space_cython.pyx":44
|
|
*
|
|
* # Template class for measurement callables
|
|
* cdef class Measurement_Callables_Cython: # <<<<<<<<<<<<<<
|
|
* cpdef f_h(self, int k, np.ndarray[DTYPE_t, ndim=2] m_pred, np.ndarray[DTYPE_t, ndim=2] Hk):
|
|
* raise NotImplemented("(cython) f_a is not implemented!")
|
|
*/
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython {
|
|
PyObject_HEAD
|
|
struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_vtab;
|
|
};
|
|
|
|
|
|
/* "GPy/models/state_space_cython.pyx":66
|
|
* raise NotImplemented("(cython) reset is not implemented!")
|
|
*
|
|
* cdef class R_handling_Cython(Measurement_Callables_Cython): # <<<<<<<<<<<<<<
|
|
* """
|
|
* The calss handles noise matrix R.
|
|
*/
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython {
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython __pyx_base;
|
|
PyArrayObject *R;
|
|
PyArrayObject *index;
|
|
int R_time_var_index;
|
|
PyArrayObject *dR;
|
|
int svd_each_time;
|
|
PyObject *R_square_root;
|
|
};
|
|
|
|
|
|
/* "GPy/models/state_space_cython.pyx":165
|
|
*
|
|
*
|
|
* cdef class Std_Measurement_Callables_Cython(R_handling_Cython): # <<<<<<<<<<<<<<
|
|
*
|
|
* cdef:
|
|
*/
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython {
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython __pyx_base;
|
|
PyArrayObject *H;
|
|
int H_time_var_index;
|
|
PyArrayObject *dH;
|
|
};
|
|
|
|
|
|
/* "GPy/models/state_space_cython.pyx":212
|
|
*
|
|
*
|
|
* cdef class Q_handling_Cython(Dynamic_Callables_Cython): # <<<<<<<<<<<<<<
|
|
*
|
|
* cdef:
|
|
*/
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython {
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython __pyx_base;
|
|
PyArrayObject *Q;
|
|
PyArrayObject *index;
|
|
int Q_time_var_index;
|
|
PyArrayObject *dQ;
|
|
PyObject *Q_square_root;
|
|
int svd_each_time;
|
|
};
|
|
|
|
|
|
/* "GPy/models/state_space_cython.pyx":318
|
|
* return square_root
|
|
*
|
|
* cdef class Std_Dynamic_Callables_Cython(Q_handling_Cython): # <<<<<<<<<<<<<<
|
|
* cdef:
|
|
* np.ndarray A
|
|
*/
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython {
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython __pyx_base;
|
|
PyArrayObject *A;
|
|
int A_time_var_index;
|
|
PyArrayObject *dA;
|
|
};
|
|
|
|
|
|
/* "GPy/models/state_space_cython.pyx":373
|
|
* return self
|
|
*
|
|
* cdef class AQcompute_batch_Cython(Q_handling_Cython): # <<<<<<<<<<<<<<
|
|
* """
|
|
* Class for calculating matrices A, Q, dA, dQ of the discrete Kalman Filter
|
|
*/
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython {
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython __pyx_base;
|
|
PyArrayObject *As;
|
|
PyArrayObject *Qs;
|
|
PyArrayObject *dAs;
|
|
PyArrayObject *dQs;
|
|
PyArrayObject *reconstruct_indices;
|
|
PyObject *Q_svd_dict;
|
|
int last_k;
|
|
};
|
|
|
|
|
|
|
|
/* "GPy/models/state_space_cython.pyx":21
|
|
*
|
|
* # Template class for dynamic callables
|
|
* cdef class Dynamic_Callables_Cython: # <<<<<<<<<<<<<<
|
|
* cpdef f_a(self, int k, np.ndarray[DTYPE_t, ndim=2] m, np.ndarray[DTYPE_t, ndim=2] A):
|
|
* raise NotImplemented("(cython) f_a is not implemented!")
|
|
*/
|
|
|
|
struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython {
|
|
PyObject *(*f_a)(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *, int, PyArrayObject *, PyArrayObject *, int __pyx_skip_dispatch);
|
|
PyObject *(*Ak)(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *, int, PyArrayObject *, PyArrayObject *, int __pyx_skip_dispatch);
|
|
PyObject *(*Qk)(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *, int, int __pyx_skip_dispatch);
|
|
PyObject *(*Q_srk)(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *, int, int __pyx_skip_dispatch);
|
|
PyObject *(*dAk)(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *, int, int __pyx_skip_dispatch);
|
|
PyObject *(*dQk)(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *, int, int __pyx_skip_dispatch);
|
|
PyObject *(*reset)(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *, int __pyx_skip_dispatch, struct __pyx_opt_args_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_reset *__pyx_optional_args);
|
|
};
|
|
static struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_vtabptr_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython;
|
|
|
|
|
|
/* "GPy/models/state_space_cython.pyx":44
|
|
*
|
|
* # Template class for measurement callables
|
|
* cdef class Measurement_Callables_Cython: # <<<<<<<<<<<<<<
|
|
* cpdef f_h(self, int k, np.ndarray[DTYPE_t, ndim=2] m_pred, np.ndarray[DTYPE_t, ndim=2] Hk):
|
|
* raise NotImplemented("(cython) f_a is not implemented!")
|
|
*/
|
|
|
|
struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_Measurement_Callables_Cython {
|
|
PyObject *(*f_h)(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *, int, PyArrayObject *, PyArrayObject *, int __pyx_skip_dispatch);
|
|
PyObject *(*Hk)(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *, int, PyArrayObject *, PyArrayObject *, int __pyx_skip_dispatch);
|
|
PyObject *(*Rk)(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *, int, int __pyx_skip_dispatch);
|
|
PyObject *(*R_isrk)(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *, int, int __pyx_skip_dispatch);
|
|
PyObject *(*dHk)(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *, int, int __pyx_skip_dispatch);
|
|
PyObject *(*dRk)(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *, int, int __pyx_skip_dispatch);
|
|
PyObject *(*reset)(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *, int __pyx_skip_dispatch, struct __pyx_opt_args_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_reset *__pyx_optional_args);
|
|
};
|
|
static struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_vtabptr_3GPy_6models_18state_space_cython_Measurement_Callables_Cython;
|
|
|
|
|
|
/* "GPy/models/state_space_cython.pyx":66
|
|
* raise NotImplemented("(cython) reset is not implemented!")
|
|
*
|
|
* cdef class R_handling_Cython(Measurement_Callables_Cython): # <<<<<<<<<<<<<<
|
|
* """
|
|
* The calss handles noise matrix R.
|
|
*/
|
|
|
|
struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_R_handling_Cython {
|
|
struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_Measurement_Callables_Cython __pyx_base;
|
|
};
|
|
static struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_R_handling_Cython *__pyx_vtabptr_3GPy_6models_18state_space_cython_R_handling_Cython;
|
|
|
|
|
|
/* "GPy/models/state_space_cython.pyx":165
|
|
*
|
|
*
|
|
* cdef class Std_Measurement_Callables_Cython(R_handling_Cython): # <<<<<<<<<<<<<<
|
|
*
|
|
* cdef:
|
|
*/
|
|
|
|
struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython {
|
|
struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_R_handling_Cython __pyx_base;
|
|
};
|
|
static struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *__pyx_vtabptr_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython;
|
|
|
|
|
|
/* "GPy/models/state_space_cython.pyx":212
|
|
*
|
|
*
|
|
* cdef class Q_handling_Cython(Dynamic_Callables_Cython): # <<<<<<<<<<<<<<
|
|
*
|
|
* cdef:
|
|
*/
|
|
|
|
struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_Q_handling_Cython {
|
|
struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython __pyx_base;
|
|
};
|
|
static struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_Q_handling_Cython *__pyx_vtabptr_3GPy_6models_18state_space_cython_Q_handling_Cython;
|
|
|
|
|
|
/* "GPy/models/state_space_cython.pyx":318
|
|
* return square_root
|
|
*
|
|
* cdef class Std_Dynamic_Callables_Cython(Q_handling_Cython): # <<<<<<<<<<<<<<
|
|
* cdef:
|
|
* np.ndarray A
|
|
*/
|
|
|
|
struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython {
|
|
struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_Q_handling_Cython __pyx_base;
|
|
};
|
|
static struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *__pyx_vtabptr_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython;
|
|
|
|
|
|
/* "GPy/models/state_space_cython.pyx":373
|
|
* return self
|
|
*
|
|
* cdef class AQcompute_batch_Cython(Q_handling_Cython): # <<<<<<<<<<<<<<
|
|
* """
|
|
* Class for calculating matrices A, Q, dA, dQ of the discrete Kalman Filter
|
|
*/
|
|
|
|
struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_AQcompute_batch_Cython {
|
|
struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_Q_handling_Cython __pyx_base;
|
|
PyObject *(*Q_inverse)(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *, int, int __pyx_skip_dispatch, struct __pyx_opt_args_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_Q_inverse *__pyx_optional_args);
|
|
};
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static struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_vtabptr_3GPy_6models_18state_space_cython_AQcompute_batch_Cython;
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|
|
r = v; __Pyx_XDECREF(tmp);\
|
|
} while (0)
|
|
#define __Pyx_DECREF_SET(r, v) do {\
|
|
PyObject *tmp = (PyObject *) r;\
|
|
r = v; __Pyx_DECREF(tmp);\
|
|
} while (0)
|
|
#define __Pyx_CLEAR(r) do { PyObject* tmp = ((PyObject*)(r)); r = NULL; __Pyx_DECREF(tmp);} while(0)
|
|
#define __Pyx_XCLEAR(r) do { if((r) != NULL) {PyObject* tmp = ((PyObject*)(r)); r = NULL; __Pyx_DECREF(tmp);}} while(0)
|
|
|
|
/* PyObjectGetAttrStr.proto */
|
|
#if CYTHON_USE_TYPE_SLOTS
|
|
static CYTHON_INLINE PyObject* __Pyx_PyObject_GetAttrStr(PyObject* obj, PyObject* attr_name);
|
|
#else
|
|
#define __Pyx_PyObject_GetAttrStr(o,n) PyObject_GetAttr(o,n)
|
|
#endif
|
|
|
|
/* GetBuiltinName.proto */
|
|
static PyObject *__Pyx_GetBuiltinName(PyObject *name);
|
|
|
|
/* IsLittleEndian.proto */
|
|
static CYTHON_INLINE int __Pyx_Is_Little_Endian(void);
|
|
|
|
/* BufferFormatCheck.proto */
|
|
static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const char* ts);
|
|
static void __Pyx_BufFmt_Init(__Pyx_BufFmt_Context* ctx,
|
|
__Pyx_BufFmt_StackElem* stack,
|
|
__Pyx_TypeInfo* type);
|
|
|
|
/* BufferGetAndValidate.proto */
|
|
#define __Pyx_GetBufferAndValidate(buf, obj, dtype, flags, nd, cast, stack)\
|
|
((obj == Py_None || obj == NULL) ?\
|
|
(__Pyx_ZeroBuffer(buf), 0) :\
|
|
__Pyx__GetBufferAndValidate(buf, obj, dtype, flags, nd, cast, stack))
|
|
static int __Pyx__GetBufferAndValidate(Py_buffer* buf, PyObject* obj,
|
|
__Pyx_TypeInfo* dtype, int flags, int nd, int cast, __Pyx_BufFmt_StackElem* stack);
|
|
static void __Pyx_ZeroBuffer(Py_buffer* buf);
|
|
static CYTHON_INLINE void __Pyx_SafeReleaseBuffer(Py_buffer* info);
|
|
static Py_ssize_t __Pyx_minusones[] = { -1, -1, -1, -1, -1, -1, -1, -1 };
|
|
static Py_ssize_t __Pyx_zeros[] = { 0, 0, 0, 0, 0, 0, 0, 0 };
|
|
|
|
/* PyDictVersioning.proto */
|
|
#if CYTHON_USE_DICT_VERSIONS && CYTHON_USE_TYPE_SLOTS
|
|
#define __PYX_DICT_VERSION_INIT ((PY_UINT64_T) -1)
|
|
#define __PYX_GET_DICT_VERSION(dict) (((PyDictObject*)(dict))->ma_version_tag)
|
|
#define __PYX_UPDATE_DICT_CACHE(dict, value, cache_var, version_var)\
|
|
(version_var) = __PYX_GET_DICT_VERSION(dict);\
|
|
(cache_var) = (value);
|
|
#define __PYX_PY_DICT_LOOKUP_IF_MODIFIED(VAR, DICT, LOOKUP) {\
|
|
static PY_UINT64_T __pyx_dict_version = 0;\
|
|
static PyObject *__pyx_dict_cached_value = NULL;\
|
|
if (likely(__PYX_GET_DICT_VERSION(DICT) == __pyx_dict_version)) {\
|
|
(VAR) = __pyx_dict_cached_value;\
|
|
} else {\
|
|
(VAR) = __pyx_dict_cached_value = (LOOKUP);\
|
|
__pyx_dict_version = __PYX_GET_DICT_VERSION(DICT);\
|
|
}\
|
|
}
|
|
static CYTHON_INLINE PY_UINT64_T __Pyx_get_tp_dict_version(PyObject *obj);
|
|
static CYTHON_INLINE PY_UINT64_T __Pyx_get_object_dict_version(PyObject *obj);
|
|
static CYTHON_INLINE int __Pyx_object_dict_version_matches(PyObject* obj, PY_UINT64_T tp_dict_version, PY_UINT64_T obj_dict_version);
|
|
#else
|
|
#define __PYX_GET_DICT_VERSION(dict) (0)
|
|
#define __PYX_UPDATE_DICT_CACHE(dict, value, cache_var, version_var)
|
|
#define __PYX_PY_DICT_LOOKUP_IF_MODIFIED(VAR, DICT, LOOKUP) (VAR) = (LOOKUP);
|
|
#endif
|
|
|
|
/* PyFunctionFastCall.proto */
|
|
#if CYTHON_FAST_PYCALL
|
|
#define __Pyx_PyFunction_FastCall(func, args, nargs)\
|
|
__Pyx_PyFunction_FastCallDict((func), (args), (nargs), NULL)
|
|
#if 1 || PY_VERSION_HEX < 0x030600B1
|
|
static PyObject *__Pyx_PyFunction_FastCallDict(PyObject *func, PyObject **args, Py_ssize_t nargs, PyObject *kwargs);
|
|
#else
|
|
#define __Pyx_PyFunction_FastCallDict(func, args, nargs, kwargs) _PyFunction_FastCallDict(func, args, nargs, kwargs)
|
|
#endif
|
|
#define __Pyx_BUILD_ASSERT_EXPR(cond)\
|
|
(sizeof(char [1 - 2*!(cond)]) - 1)
|
|
#ifndef Py_MEMBER_SIZE
|
|
#define Py_MEMBER_SIZE(type, member) sizeof(((type *)0)->member)
|
|
#endif
|
|
static size_t __pyx_pyframe_localsplus_offset = 0;
|
|
#include "frameobject.h"
|
|
#define __Pxy_PyFrame_Initialize_Offsets()\
|
|
((void)__Pyx_BUILD_ASSERT_EXPR(sizeof(PyFrameObject) == offsetof(PyFrameObject, f_localsplus) + Py_MEMBER_SIZE(PyFrameObject, f_localsplus)),\
|
|
(void)(__pyx_pyframe_localsplus_offset = ((size_t)PyFrame_Type.tp_basicsize) - Py_MEMBER_SIZE(PyFrameObject, f_localsplus)))
|
|
#define __Pyx_PyFrame_GetLocalsplus(frame)\
|
|
(assert(__pyx_pyframe_localsplus_offset), (PyObject **)(((char *)(frame)) + __pyx_pyframe_localsplus_offset))
|
|
#endif
|
|
|
|
/* PyCFunctionFastCall.proto */
|
|
#if CYTHON_FAST_PYCCALL
|
|
static CYTHON_INLINE PyObject *__Pyx_PyCFunction_FastCall(PyObject *func, PyObject **args, Py_ssize_t nargs);
|
|
#else
|
|
#define __Pyx_PyCFunction_FastCall(func, args, nargs) (assert(0), NULL)
|
|
#endif
|
|
|
|
/* PyObjectCall.proto */
|
|
#if CYTHON_COMPILING_IN_CPYTHON
|
|
static CYTHON_INLINE PyObject* __Pyx_PyObject_Call(PyObject *func, PyObject *arg, PyObject *kw);
|
|
#else
|
|
#define __Pyx_PyObject_Call(func, arg, kw) PyObject_Call(func, arg, kw)
|
|
#endif
|
|
|
|
/* PyThreadStateGet.proto */
|
|
#if CYTHON_FAST_THREAD_STATE
|
|
#define __Pyx_PyThreadState_declare PyThreadState *__pyx_tstate;
|
|
#define __Pyx_PyThreadState_assign __pyx_tstate = __Pyx_PyThreadState_Current;
|
|
#define __Pyx_PyErr_Occurred() __pyx_tstate->curexc_type
|
|
#else
|
|
#define __Pyx_PyThreadState_declare
|
|
#define __Pyx_PyThreadState_assign
|
|
#define __Pyx_PyErr_Occurred() PyErr_Occurred()
|
|
#endif
|
|
|
|
/* PyErrFetchRestore.proto */
|
|
#if CYTHON_FAST_THREAD_STATE
|
|
#define __Pyx_PyErr_Clear() __Pyx_ErrRestore(NULL, NULL, NULL)
|
|
#define __Pyx_ErrRestoreWithState(type, value, tb) __Pyx_ErrRestoreInState(PyThreadState_GET(), type, value, tb)
|
|
#define __Pyx_ErrFetchWithState(type, value, tb) __Pyx_ErrFetchInState(PyThreadState_GET(), type, value, tb)
|
|
#define __Pyx_ErrRestore(type, value, tb) __Pyx_ErrRestoreInState(__pyx_tstate, type, value, tb)
|
|
#define __Pyx_ErrFetch(type, value, tb) __Pyx_ErrFetchInState(__pyx_tstate, type, value, tb)
|
|
static CYTHON_INLINE void __Pyx_ErrRestoreInState(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb);
|
|
static CYTHON_INLINE void __Pyx_ErrFetchInState(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb);
|
|
#if CYTHON_COMPILING_IN_CPYTHON
|
|
#define __Pyx_PyErr_SetNone(exc) (Py_INCREF(exc), __Pyx_ErrRestore((exc), NULL, NULL))
|
|
#else
|
|
#define __Pyx_PyErr_SetNone(exc) PyErr_SetNone(exc)
|
|
#endif
|
|
#else
|
|
#define __Pyx_PyErr_Clear() PyErr_Clear()
|
|
#define __Pyx_PyErr_SetNone(exc) PyErr_SetNone(exc)
|
|
#define __Pyx_ErrRestoreWithState(type, value, tb) PyErr_Restore(type, value, tb)
|
|
#define __Pyx_ErrFetchWithState(type, value, tb) PyErr_Fetch(type, value, tb)
|
|
#define __Pyx_ErrRestoreInState(tstate, type, value, tb) PyErr_Restore(type, value, tb)
|
|
#define __Pyx_ErrFetchInState(tstate, type, value, tb) PyErr_Fetch(type, value, tb)
|
|
#define __Pyx_ErrRestore(type, value, tb) PyErr_Restore(type, value, tb)
|
|
#define __Pyx_ErrFetch(type, value, tb) PyErr_Fetch(type, value, tb)
|
|
#endif
|
|
|
|
/* RaiseException.proto */
|
|
static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause);
|
|
|
|
/* RaiseArgTupleInvalid.proto */
|
|
static void __Pyx_RaiseArgtupleInvalid(const char* func_name, int exact,
|
|
Py_ssize_t num_min, Py_ssize_t num_max, Py_ssize_t num_found);
|
|
|
|
/* RaiseDoubleKeywords.proto */
|
|
static void __Pyx_RaiseDoubleKeywordsError(const char* func_name, PyObject* kw_name);
|
|
|
|
/* ParseKeywords.proto */
|
|
static int __Pyx_ParseOptionalKeywords(PyObject *kwds, PyObject **argnames[],\
|
|
PyObject *kwds2, PyObject *values[], Py_ssize_t num_pos_args,\
|
|
const char* function_name);
|
|
|
|
/* ArgTypeTest.proto */
|
|
#define __Pyx_ArgTypeTest(obj, type, none_allowed, name, exact)\
|
|
((likely((Py_TYPE(obj) == type) | (none_allowed && (obj == Py_None)))) ? 1 :\
|
|
__Pyx__ArgTypeTest(obj, type, name, exact))
|
|
static int __Pyx__ArgTypeTest(PyObject *obj, PyTypeObject *type, const char *name, int exact);
|
|
|
|
/* PyObjectCall2Args.proto */
|
|
static CYTHON_UNUSED PyObject* __Pyx_PyObject_Call2Args(PyObject* function, PyObject* arg1, PyObject* arg2);
|
|
|
|
/* PyObjectCallMethO.proto */
|
|
#if CYTHON_COMPILING_IN_CPYTHON
|
|
static CYTHON_INLINE PyObject* __Pyx_PyObject_CallMethO(PyObject *func, PyObject *arg);
|
|
#endif
|
|
|
|
/* PyObjectCallOneArg.proto */
|
|
static CYTHON_INLINE PyObject* __Pyx_PyObject_CallOneArg(PyObject *func, PyObject *arg);
|
|
|
|
/* PyErrExceptionMatches.proto */
|
|
#if CYTHON_FAST_THREAD_STATE
|
|
#define __Pyx_PyErr_ExceptionMatches(err) __Pyx_PyErr_ExceptionMatchesInState(__pyx_tstate, err)
|
|
static CYTHON_INLINE int __Pyx_PyErr_ExceptionMatchesInState(PyThreadState* tstate, PyObject* err);
|
|
#else
|
|
#define __Pyx_PyErr_ExceptionMatches(err) PyErr_ExceptionMatches(err)
|
|
#endif
|
|
|
|
/* GetAttr.proto */
|
|
static CYTHON_INLINE PyObject *__Pyx_GetAttr(PyObject *, PyObject *);
|
|
|
|
/* GetAttr3.proto */
|
|
static CYTHON_INLINE PyObject *__Pyx_GetAttr3(PyObject *, PyObject *, PyObject *);
|
|
|
|
/* GetModuleGlobalName.proto */
|
|
#if CYTHON_USE_DICT_VERSIONS
|
|
#define __Pyx_GetModuleGlobalName(var, name) {\
|
|
static PY_UINT64_T __pyx_dict_version = 0;\
|
|
static PyObject *__pyx_dict_cached_value = NULL;\
|
|
(var) = (likely(__pyx_dict_version == __PYX_GET_DICT_VERSION(__pyx_d))) ?\
|
|
(likely(__pyx_dict_cached_value) ? __Pyx_NewRef(__pyx_dict_cached_value) : __Pyx_GetBuiltinName(name)) :\
|
|
__Pyx__GetModuleGlobalName(name, &__pyx_dict_version, &__pyx_dict_cached_value);\
|
|
}
|
|
#define __Pyx_GetModuleGlobalNameUncached(var, name) {\
|
|
PY_UINT64_T __pyx_dict_version;\
|
|
PyObject *__pyx_dict_cached_value;\
|
|
(var) = __Pyx__GetModuleGlobalName(name, &__pyx_dict_version, &__pyx_dict_cached_value);\
|
|
}
|
|
static PyObject *__Pyx__GetModuleGlobalName(PyObject *name, PY_UINT64_T *dict_version, PyObject **dict_cached_value);
|
|
#else
|
|
#define __Pyx_GetModuleGlobalName(var, name) (var) = __Pyx__GetModuleGlobalName(name)
|
|
#define __Pyx_GetModuleGlobalNameUncached(var, name) (var) = __Pyx__GetModuleGlobalName(name)
|
|
static CYTHON_INLINE PyObject *__Pyx__GetModuleGlobalName(PyObject *name);
|
|
#endif
|
|
|
|
/* GetItemInt.proto */
|
|
#define __Pyx_GetItemInt(o, i, type, is_signed, to_py_func, is_list, wraparound, boundscheck)\
|
|
(__Pyx_fits_Py_ssize_t(i, type, is_signed) ?\
|
|
__Pyx_GetItemInt_Fast(o, (Py_ssize_t)i, is_list, wraparound, boundscheck) :\
|
|
(is_list ? (PyErr_SetString(PyExc_IndexError, "list index out of range"), (PyObject*)NULL) :\
|
|
__Pyx_GetItemInt_Generic(o, to_py_func(i))))
|
|
#define __Pyx_GetItemInt_List(o, i, type, is_signed, to_py_func, is_list, wraparound, boundscheck)\
|
|
(__Pyx_fits_Py_ssize_t(i, type, is_signed) ?\
|
|
__Pyx_GetItemInt_List_Fast(o, (Py_ssize_t)i, wraparound, boundscheck) :\
|
|
(PyErr_SetString(PyExc_IndexError, "list index out of range"), (PyObject*)NULL))
|
|
static CYTHON_INLINE PyObject *__Pyx_GetItemInt_List_Fast(PyObject *o, Py_ssize_t i,
|
|
int wraparound, int boundscheck);
|
|
#define __Pyx_GetItemInt_Tuple(o, i, type, is_signed, to_py_func, is_list, wraparound, boundscheck)\
|
|
(__Pyx_fits_Py_ssize_t(i, type, is_signed) ?\
|
|
__Pyx_GetItemInt_Tuple_Fast(o, (Py_ssize_t)i, wraparound, boundscheck) :\
|
|
(PyErr_SetString(PyExc_IndexError, "tuple index out of range"), (PyObject*)NULL))
|
|
static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Tuple_Fast(PyObject *o, Py_ssize_t i,
|
|
int wraparound, int boundscheck);
|
|
static PyObject *__Pyx_GetItemInt_Generic(PyObject *o, PyObject* j);
|
|
static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Fast(PyObject *o, Py_ssize_t i,
|
|
int is_list, int wraparound, int boundscheck);
|
|
|
|
/* ObjectGetItem.proto */
|
|
#if CYTHON_USE_TYPE_SLOTS
|
|
static CYTHON_INLINE PyObject *__Pyx_PyObject_GetItem(PyObject *obj, PyObject* key);
|
|
#else
|
|
#define __Pyx_PyObject_GetItem(obj, key) PyObject_GetItem(obj, key)
|
|
#endif
|
|
|
|
/* ExtTypeTest.proto */
|
|
static CYTHON_INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type);
|
|
|
|
/* BufferFallbackError.proto */
|
|
static void __Pyx_RaiseBufferFallbackError(void);
|
|
|
|
/* RaiseTooManyValuesToUnpack.proto */
|
|
static CYTHON_INLINE void __Pyx_RaiseTooManyValuesError(Py_ssize_t expected);
|
|
|
|
/* RaiseNeedMoreValuesToUnpack.proto */
|
|
static CYTHON_INLINE void __Pyx_RaiseNeedMoreValuesError(Py_ssize_t index);
|
|
|
|
/* IterFinish.proto */
|
|
static CYTHON_INLINE int __Pyx_IterFinish(void);
|
|
|
|
/* UnpackItemEndCheck.proto */
|
|
static int __Pyx_IternextUnpackEndCheck(PyObject *retval, Py_ssize_t expected);
|
|
|
|
/* PyDictContains.proto */
|
|
static CYTHON_INLINE int __Pyx_PyDict_ContainsTF(PyObject* item, PyObject* dict, int eq) {
|
|
int result = PyDict_Contains(dict, item);
|
|
return unlikely(result < 0) ? result : (result == (eq == Py_EQ));
|
|
}
|
|
|
|
/* DictGetItem.proto */
|
|
#if PY_MAJOR_VERSION >= 3 && !CYTHON_COMPILING_IN_PYPY
|
|
static PyObject *__Pyx_PyDict_GetItem(PyObject *d, PyObject* key);
|
|
#define __Pyx_PyObject_Dict_GetItem(obj, name)\
|
|
(likely(PyDict_CheckExact(obj)) ?\
|
|
__Pyx_PyDict_GetItem(obj, name) : PyObject_GetItem(obj, name))
|
|
#else
|
|
#define __Pyx_PyDict_GetItem(d, key) PyObject_GetItem(d, key)
|
|
#define __Pyx_PyObject_Dict_GetItem(obj, name) PyObject_GetItem(obj, name)
|
|
#endif
|
|
|
|
/* PyObjectSetAttrStr.proto */
|
|
#if CYTHON_USE_TYPE_SLOTS
|
|
#define __Pyx_PyObject_DelAttrStr(o,n) __Pyx_PyObject_SetAttrStr(o, n, NULL)
|
|
static CYTHON_INLINE int __Pyx_PyObject_SetAttrStr(PyObject* obj, PyObject* attr_name, PyObject* value);
|
|
#else
|
|
#define __Pyx_PyObject_DelAttrStr(o,n) PyObject_DelAttr(o,n)
|
|
#define __Pyx_PyObject_SetAttrStr(o,n,v) PyObject_SetAttr(o,n,v)
|
|
#endif
|
|
|
|
/* PySequenceContains.proto */
|
|
static CYTHON_INLINE int __Pyx_PySequence_ContainsTF(PyObject* item, PyObject* seq, int eq) {
|
|
int result = PySequence_Contains(seq, item);
|
|
return unlikely(result < 0) ? result : (result == (eq == Py_EQ));
|
|
}
|
|
|
|
/* SetItemInt.proto */
|
|
#define __Pyx_SetItemInt(o, i, v, type, is_signed, to_py_func, is_list, wraparound, boundscheck)\
|
|
(__Pyx_fits_Py_ssize_t(i, type, is_signed) ?\
|
|
__Pyx_SetItemInt_Fast(o, (Py_ssize_t)i, v, is_list, wraparound, boundscheck) :\
|
|
(is_list ? (PyErr_SetString(PyExc_IndexError, "list assignment index out of range"), -1) :\
|
|
__Pyx_SetItemInt_Generic(o, to_py_func(i), v)))
|
|
static int __Pyx_SetItemInt_Generic(PyObject *o, PyObject *j, PyObject *v);
|
|
static CYTHON_INLINE int __Pyx_SetItemInt_Fast(PyObject *o, Py_ssize_t i, PyObject *v,
|
|
int is_list, int wraparound, int boundscheck);
|
|
|
|
/* PyFloatBinop.proto */
|
|
#if !CYTHON_COMPILING_IN_PYPY
|
|
static PyObject* __Pyx_PyFloat_DivideCObj(PyObject *op1, PyObject *op2, double floatval, int inplace, int zerodivision_check);
|
|
#else
|
|
#define __Pyx_PyFloat_DivideCObj(op1, op2, floatval, inplace, zerodivision_check)\
|
|
((inplace ? __Pyx_PyNumber_InPlaceDivide(op1, op2) : __Pyx_PyNumber_Divide(op1, op2)))
|
|
#endif
|
|
|
|
/* Import.proto */
|
|
static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level);
|
|
|
|
/* ImportFrom.proto */
|
|
static PyObject* __Pyx_ImportFrom(PyObject* module, PyObject* name);
|
|
|
|
/* HasAttr.proto */
|
|
static CYTHON_INLINE int __Pyx_HasAttr(PyObject *, PyObject *);
|
|
|
|
/* GetTopmostException.proto */
|
|
#if CYTHON_USE_EXC_INFO_STACK
|
|
static _PyErr_StackItem * __Pyx_PyErr_GetTopmostException(PyThreadState *tstate);
|
|
#endif
|
|
|
|
/* SaveResetException.proto */
|
|
#if CYTHON_FAST_THREAD_STATE
|
|
#define __Pyx_ExceptionSave(type, value, tb) __Pyx__ExceptionSave(__pyx_tstate, type, value, tb)
|
|
static CYTHON_INLINE void __Pyx__ExceptionSave(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb);
|
|
#define __Pyx_ExceptionReset(type, value, tb) __Pyx__ExceptionReset(__pyx_tstate, type, value, tb)
|
|
static CYTHON_INLINE void __Pyx__ExceptionReset(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb);
|
|
#else
|
|
#define __Pyx_ExceptionSave(type, value, tb) PyErr_GetExcInfo(type, value, tb)
|
|
#define __Pyx_ExceptionReset(type, value, tb) PyErr_SetExcInfo(type, value, tb)
|
|
#endif
|
|
|
|
/* GetException.proto */
|
|
#if CYTHON_FAST_THREAD_STATE
|
|
#define __Pyx_GetException(type, value, tb) __Pyx__GetException(__pyx_tstate, type, value, tb)
|
|
static int __Pyx__GetException(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb);
|
|
#else
|
|
static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb);
|
|
#endif
|
|
|
|
/* CallNextTpTraverse.proto */
|
|
static int __Pyx_call_next_tp_traverse(PyObject* obj, visitproc v, void *a, traverseproc current_tp_traverse);
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/* CallNextTpClear.proto */
|
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static void __Pyx_call_next_tp_clear(PyObject* obj, inquiry current_tp_dealloc);
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/* PyObject_GenericGetAttrNoDict.proto */
|
|
#if CYTHON_USE_TYPE_SLOTS && CYTHON_USE_PYTYPE_LOOKUP && PY_VERSION_HEX < 0x03070000
|
|
static CYTHON_INLINE PyObject* __Pyx_PyObject_GenericGetAttrNoDict(PyObject* obj, PyObject* attr_name);
|
|
#else
|
|
#define __Pyx_PyObject_GenericGetAttrNoDict PyObject_GenericGetAttr
|
|
#endif
|
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|
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/* PyObject_GenericGetAttr.proto */
|
|
#if CYTHON_USE_TYPE_SLOTS && CYTHON_USE_PYTYPE_LOOKUP && PY_VERSION_HEX < 0x03070000
|
|
static PyObject* __Pyx_PyObject_GenericGetAttr(PyObject* obj, PyObject* attr_name);
|
|
#else
|
|
#define __Pyx_PyObject_GenericGetAttr PyObject_GenericGetAttr
|
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#endif
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/* SetVTable.proto */
|
|
static int __Pyx_SetVtable(PyObject *dict, void *vtable);
|
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/* PyObjectGetAttrStrNoError.proto */
|
|
static CYTHON_INLINE PyObject* __Pyx_PyObject_GetAttrStrNoError(PyObject* obj, PyObject* attr_name);
|
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|
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/* SetupReduce.proto */
|
|
static int __Pyx_setup_reduce(PyObject* type_obj);
|
|
|
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/* TypeImport.proto */
|
|
#ifndef __PYX_HAVE_RT_ImportType_proto
|
|
#define __PYX_HAVE_RT_ImportType_proto
|
|
enum __Pyx_ImportType_CheckSize {
|
|
__Pyx_ImportType_CheckSize_Error = 0,
|
|
__Pyx_ImportType_CheckSize_Warn = 1,
|
|
__Pyx_ImportType_CheckSize_Ignore = 2
|
|
};
|
|
static PyTypeObject *__Pyx_ImportType(PyObject* module, const char *module_name, const char *class_name, size_t size, enum __Pyx_ImportType_CheckSize check_size);
|
|
#endif
|
|
|
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/* CLineInTraceback.proto */
|
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#ifdef CYTHON_CLINE_IN_TRACEBACK
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#define __Pyx_CLineForTraceback(tstate, c_line) (((CYTHON_CLINE_IN_TRACEBACK)) ? c_line : 0)
|
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#else
|
|
static int __Pyx_CLineForTraceback(PyThreadState *tstate, int c_line);
|
|
#endif
|
|
|
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/* CodeObjectCache.proto */
|
|
typedef struct {
|
|
PyCodeObject* code_object;
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|
int code_line;
|
|
} __Pyx_CodeObjectCacheEntry;
|
|
struct __Pyx_CodeObjectCache {
|
|
int count;
|
|
int max_count;
|
|
__Pyx_CodeObjectCacheEntry* entries;
|
|
};
|
|
static struct __Pyx_CodeObjectCache __pyx_code_cache = {0,0,NULL};
|
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static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line);
|
|
static PyCodeObject *__pyx_find_code_object(int code_line);
|
|
static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object);
|
|
|
|
/* AddTraceback.proto */
|
|
static void __Pyx_AddTraceback(const char *funcname, int c_line,
|
|
int py_line, const char *filename);
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|
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/* CIntToPy.proto */
|
|
static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value);
|
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|
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/* BufferStructDeclare.proto */
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|
typedef struct {
|
|
Py_ssize_t shape, strides, suboffsets;
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|
} __Pyx_Buf_DimInfo;
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|
typedef struct {
|
|
size_t refcount;
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|
Py_buffer pybuffer;
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|
} __Pyx_Buffer;
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typedef struct {
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|
__Pyx_Buffer *rcbuffer;
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|
char *data;
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|
__Pyx_Buf_DimInfo diminfo[8];
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|
} __Pyx_LocalBuf_ND;
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|
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|
#if PY_MAJOR_VERSION < 3
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|
static int __Pyx_GetBuffer(PyObject *obj, Py_buffer *view, int flags);
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|
static void __Pyx_ReleaseBuffer(Py_buffer *view);
|
|
#else
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|
#define __Pyx_GetBuffer PyObject_GetBuffer
|
|
#define __Pyx_ReleaseBuffer PyBuffer_Release
|
|
#endif
|
|
|
|
|
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/* CIntToPy.proto */
|
|
static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value);
|
|
|
|
/* CIntToPy.proto */
|
|
static CYTHON_INLINE PyObject* __Pyx_PyInt_From_Py_intptr_t(Py_intptr_t value);
|
|
|
|
/* RealImag.proto */
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|
#if CYTHON_CCOMPLEX
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|
#ifdef __cplusplus
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|
#define __Pyx_CREAL(z) ((z).real())
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|
#define __Pyx_CIMAG(z) ((z).imag())
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|
#else
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|
#define __Pyx_CREAL(z) (__real__(z))
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|
#define __Pyx_CIMAG(z) (__imag__(z))
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#endif
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|
#else
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|
#define __Pyx_CREAL(z) ((z).real)
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|
#define __Pyx_CIMAG(z) ((z).imag)
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|
#endif
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|
#if defined(__cplusplus) && CYTHON_CCOMPLEX\
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|
&& (defined(_WIN32) || defined(__clang__) || (defined(__GNUC__) && (__GNUC__ >= 5 || __GNUC__ == 4 && __GNUC_MINOR__ >= 4 )) || __cplusplus >= 201103)
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|
#define __Pyx_SET_CREAL(z,x) ((z).real(x))
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|
#define __Pyx_SET_CIMAG(z,y) ((z).imag(y))
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|
#else
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|
#define __Pyx_SET_CREAL(z,x) __Pyx_CREAL(z) = (x)
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|
#define __Pyx_SET_CIMAG(z,y) __Pyx_CIMAG(z) = (y)
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|
#endif
|
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/* Arithmetic.proto */
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|
#if CYTHON_CCOMPLEX
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|
#define __Pyx_c_eq_float(a, b) ((a)==(b))
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#define __Pyx_c_sum_float(a, b) ((a)+(b))
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#define __Pyx_c_diff_float(a, b) ((a)-(b))
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|
#define __Pyx_c_prod_float(a, b) ((a)*(b))
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|
#define __Pyx_c_quot_float(a, b) ((a)/(b))
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|
#define __Pyx_c_neg_float(a) (-(a))
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|
#ifdef __cplusplus
|
|
#define __Pyx_c_is_zero_float(z) ((z)==(float)0)
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|
#define __Pyx_c_conj_float(z) (::std::conj(z))
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|
#if 1
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|
#define __Pyx_c_abs_float(z) (::std::abs(z))
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|
#define __Pyx_c_pow_float(a, b) (::std::pow(a, b))
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|
#endif
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|
#else
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|
#define __Pyx_c_is_zero_float(z) ((z)==0)
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|
#define __Pyx_c_conj_float(z) (conjf(z))
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|
#if 1
|
|
#define __Pyx_c_abs_float(z) (cabsf(z))
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|
#define __Pyx_c_pow_float(a, b) (cpowf(a, b))
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|
#endif
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|
#endif
|
|
#else
|
|
static CYTHON_INLINE int __Pyx_c_eq_float(__pyx_t_float_complex, __pyx_t_float_complex);
|
|
static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sum_float(__pyx_t_float_complex, __pyx_t_float_complex);
|
|
static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_diff_float(__pyx_t_float_complex, __pyx_t_float_complex);
|
|
static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_prod_float(__pyx_t_float_complex, __pyx_t_float_complex);
|
|
static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quot_float(__pyx_t_float_complex, __pyx_t_float_complex);
|
|
static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_neg_float(__pyx_t_float_complex);
|
|
static CYTHON_INLINE int __Pyx_c_is_zero_float(__pyx_t_float_complex);
|
|
static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conj_float(__pyx_t_float_complex);
|
|
#if 1
|
|
static CYTHON_INLINE float __Pyx_c_abs_float(__pyx_t_float_complex);
|
|
static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_pow_float(__pyx_t_float_complex, __pyx_t_float_complex);
|
|
#endif
|
|
#endif
|
|
|
|
/* Arithmetic.proto */
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|
#if CYTHON_CCOMPLEX
|
|
#define __Pyx_c_eq_double(a, b) ((a)==(b))
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|
#define __Pyx_c_sum_double(a, b) ((a)+(b))
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|
#define __Pyx_c_diff_double(a, b) ((a)-(b))
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|
#define __Pyx_c_prod_double(a, b) ((a)*(b))
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|
#define __Pyx_c_quot_double(a, b) ((a)/(b))
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|
#define __Pyx_c_neg_double(a) (-(a))
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|
#ifdef __cplusplus
|
|
#define __Pyx_c_is_zero_double(z) ((z)==(double)0)
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|
#define __Pyx_c_conj_double(z) (::std::conj(z))
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|
#if 1
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|
#define __Pyx_c_abs_double(z) (::std::abs(z))
|
|
#define __Pyx_c_pow_double(a, b) (::std::pow(a, b))
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|
#endif
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|
#else
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|
#define __Pyx_c_is_zero_double(z) ((z)==0)
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|
#define __Pyx_c_conj_double(z) (conj(z))
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|
#if 1
|
|
#define __Pyx_c_abs_double(z) (cabs(z))
|
|
#define __Pyx_c_pow_double(a, b) (cpow(a, b))
|
|
#endif
|
|
#endif
|
|
#else
|
|
static CYTHON_INLINE int __Pyx_c_eq_double(__pyx_t_double_complex, __pyx_t_double_complex);
|
|
static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum_double(__pyx_t_double_complex, __pyx_t_double_complex);
|
|
static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff_double(__pyx_t_double_complex, __pyx_t_double_complex);
|
|
static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_prod_double(__pyx_t_double_complex, __pyx_t_double_complex);
|
|
static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot_double(__pyx_t_double_complex, __pyx_t_double_complex);
|
|
static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg_double(__pyx_t_double_complex);
|
|
static CYTHON_INLINE int __Pyx_c_is_zero_double(__pyx_t_double_complex);
|
|
static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj_double(__pyx_t_double_complex);
|
|
#if 1
|
|
static CYTHON_INLINE double __Pyx_c_abs_double(__pyx_t_double_complex);
|
|
static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow_double(__pyx_t_double_complex, __pyx_t_double_complex);
|
|
#endif
|
|
#endif
|
|
|
|
/* CIntFromPy.proto */
|
|
static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *);
|
|
|
|
/* CIntFromPy.proto */
|
|
static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *);
|
|
|
|
/* FastTypeChecks.proto */
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|
#if CYTHON_COMPILING_IN_CPYTHON
|
|
#define __Pyx_TypeCheck(obj, type) __Pyx_IsSubtype(Py_TYPE(obj), (PyTypeObject *)type)
|
|
static CYTHON_INLINE int __Pyx_IsSubtype(PyTypeObject *a, PyTypeObject *b);
|
|
static CYTHON_INLINE int __Pyx_PyErr_GivenExceptionMatches(PyObject *err, PyObject *type);
|
|
static CYTHON_INLINE int __Pyx_PyErr_GivenExceptionMatches2(PyObject *err, PyObject *type1, PyObject *type2);
|
|
#else
|
|
#define __Pyx_TypeCheck(obj, type) PyObject_TypeCheck(obj, (PyTypeObject *)type)
|
|
#define __Pyx_PyErr_GivenExceptionMatches(err, type) PyErr_GivenExceptionMatches(err, type)
|
|
#define __Pyx_PyErr_GivenExceptionMatches2(err, type1, type2) (PyErr_GivenExceptionMatches(err, type1) || PyErr_GivenExceptionMatches(err, type2))
|
|
#endif
|
|
#define __Pyx_PyException_Check(obj) __Pyx_TypeCheck(obj, PyExc_Exception)
|
|
|
|
/* CheckBinaryVersion.proto */
|
|
static int __Pyx_check_binary_version(void);
|
|
|
|
/* InitStrings.proto */
|
|
static int __Pyx_InitStrings(__Pyx_StringTabEntry *t);
|
|
|
|
static PyObject *__pyx_f_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_f_a(CYTHON_UNUSED struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_self, CYTHON_UNUSED int __pyx_v_k, CYTHON_UNUSED PyArrayObject *__pyx_v_m, CYTHON_UNUSED PyArrayObject *__pyx_v_A, int __pyx_skip_dispatch); /* proto*/
|
|
static PyObject *__pyx_f_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_Ak(CYTHON_UNUSED struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_self, CYTHON_UNUSED int __pyx_v_k, CYTHON_UNUSED PyArrayObject *__pyx_v_m, CYTHON_UNUSED PyArrayObject *__pyx_v_P, int __pyx_skip_dispatch); /* proto*/
|
|
static PyObject *__pyx_f_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_Qk(CYTHON_UNUSED struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_self, CYTHON_UNUSED int __pyx_v_k, int __pyx_skip_dispatch); /* proto*/
|
|
static PyObject *__pyx_f_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_Q_srk(CYTHON_UNUSED struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_self, CYTHON_UNUSED int __pyx_v_k, int __pyx_skip_dispatch); /* proto*/
|
|
static PyObject *__pyx_f_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_dAk(CYTHON_UNUSED struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_self, CYTHON_UNUSED int __pyx_v_k, int __pyx_skip_dispatch); /* proto*/
|
|
static PyObject *__pyx_f_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_dQk(CYTHON_UNUSED struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_self, CYTHON_UNUSED int __pyx_v_k, int __pyx_skip_dispatch); /* proto*/
|
|
static PyObject *__pyx_f_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_reset(CYTHON_UNUSED struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_skip_dispatch, struct __pyx_opt_args_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_reset *__pyx_optional_args); /* proto*/
|
|
static PyObject *__pyx_f_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_f_h(CYTHON_UNUSED struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_self, CYTHON_UNUSED int __pyx_v_k, CYTHON_UNUSED PyArrayObject *__pyx_v_m_pred, CYTHON_UNUSED PyArrayObject *__pyx_v_Hk, int __pyx_skip_dispatch); /* proto*/
|
|
static PyObject *__pyx_f_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_Hk(CYTHON_UNUSED struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_self, CYTHON_UNUSED int __pyx_v_k, CYTHON_UNUSED PyArrayObject *__pyx_v_m_pred, CYTHON_UNUSED PyArrayObject *__pyx_v_P_pred, int __pyx_skip_dispatch); /* proto*/
|
|
static PyObject *__pyx_f_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_Rk(CYTHON_UNUSED struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_self, CYTHON_UNUSED int __pyx_v_k, int __pyx_skip_dispatch); /* proto*/
|
|
static PyObject *__pyx_f_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_R_isrk(CYTHON_UNUSED struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_self, CYTHON_UNUSED int __pyx_v_k, int __pyx_skip_dispatch); /* proto*/
|
|
static PyObject *__pyx_f_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_dHk(CYTHON_UNUSED struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_self, CYTHON_UNUSED int __pyx_v_k, int __pyx_skip_dispatch); /* proto*/
|
|
static PyObject *__pyx_f_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_dRk(CYTHON_UNUSED struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_self, CYTHON_UNUSED int __pyx_v_k, int __pyx_skip_dispatch); /* proto*/
|
|
static PyObject *__pyx_f_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_reset(CYTHON_UNUSED struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_self, int __pyx_skip_dispatch, struct __pyx_opt_args_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_reset *__pyx_optional_args); /* proto*/
|
|
static PyObject *__pyx_f_3GPy_6models_18state_space_cython_17R_handling_Cython_Rk(struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython *__pyx_v_self, int __pyx_v_k, int __pyx_skip_dispatch); /* proto*/
|
|
static PyObject *__pyx_f_3GPy_6models_18state_space_cython_17R_handling_Cython_dRk(struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython *__pyx_v_self, CYTHON_UNUSED int __pyx_v_k, int __pyx_skip_dispatch); /* proto*/
|
|
static PyObject *__pyx_f_3GPy_6models_18state_space_cython_17R_handling_Cython_R_isrk(struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython *__pyx_v_self, int __pyx_v_k, int __pyx_skip_dispatch); /* proto*/
|
|
static PyObject *__pyx_f_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_f_h(CYTHON_UNUSED struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *__pyx_v_self, CYTHON_UNUSED int __pyx_v_k, PyArrayObject *__pyx_v_m, PyArrayObject *__pyx_v_H, int __pyx_skip_dispatch); /* proto*/
|
|
static PyObject *__pyx_f_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_Hk(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *__pyx_v_self, int __pyx_v_k, CYTHON_UNUSED PyArrayObject *__pyx_v_m_pred, CYTHON_UNUSED PyArrayObject *__pyx_v_P_pred, int __pyx_skip_dispatch); /* proto*/
|
|
static PyObject *__pyx_f_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_dHk(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *__pyx_v_self, CYTHON_UNUSED int __pyx_v_k, int __pyx_skip_dispatch); /* proto*/
|
|
static PyObject *__pyx_f_3GPy_6models_18state_space_cython_17Q_handling_Cython_Qk(struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython *__pyx_v_self, int __pyx_v_k, int __pyx_skip_dispatch); /* proto*/
|
|
static PyObject *__pyx_f_3GPy_6models_18state_space_cython_17Q_handling_Cython_dQk(struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython *__pyx_v_self, CYTHON_UNUSED int __pyx_v_k, int __pyx_skip_dispatch); /* proto*/
|
|
static PyObject *__pyx_f_3GPy_6models_18state_space_cython_17Q_handling_Cython_Q_srk(struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython *__pyx_v_self, int __pyx_v_k, int __pyx_skip_dispatch); /* proto*/
|
|
static PyObject *__pyx_f_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_f_a(CYTHON_UNUSED struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *__pyx_v_self, CYTHON_UNUSED int __pyx_v_k, PyArrayObject *__pyx_v_m, PyArrayObject *__pyx_v_A, int __pyx_skip_dispatch); /* proto*/
|
|
static PyObject *__pyx_f_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_Ak(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_k, CYTHON_UNUSED PyArrayObject *__pyx_v_m_pred, CYTHON_UNUSED PyArrayObject *__pyx_v_P_pred, int __pyx_skip_dispatch); /* proto*/
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static PyObject *__pyx_f_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_dAk(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *__pyx_v_self, CYTHON_UNUSED int __pyx_v_k, int __pyx_skip_dispatch); /* proto*/
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static PyObject *__pyx_f_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_reset(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_skip_dispatch, struct __pyx_opt_args_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_reset *__pyx_optional_args); /* proto*/
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static PyObject *__pyx_f_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_f_a(CYTHON_UNUSED struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, CYTHON_UNUSED int __pyx_v_k, PyArrayObject *__pyx_v_m, PyArrayObject *__pyx_v_A, int __pyx_skip_dispatch); /* proto*/
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static PyObject *__pyx_f_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_reset(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_skip_dispatch, struct __pyx_opt_args_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_reset *__pyx_optional_args); /* proto*/
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static PyObject *__pyx_f_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_Ak(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_v_k, CYTHON_UNUSED PyArrayObject *__pyx_v_m, CYTHON_UNUSED PyArrayObject *__pyx_v_P, int __pyx_skip_dispatch); /* proto*/
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static PyObject *__pyx_f_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_Qk(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_v_k, int __pyx_skip_dispatch); /* proto*/
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static PyObject *__pyx_f_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_dAk(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_v_k, int __pyx_skip_dispatch); /* proto*/
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static PyObject *__pyx_f_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_dQk(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_v_k, int __pyx_skip_dispatch); /* proto*/
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static PyObject *__pyx_f_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_Q_srk(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_v_k, int __pyx_skip_dispatch); /* proto*/
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static PyObject *__pyx_f_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_Q_inverse(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_v_k, int __pyx_skip_dispatch, struct __pyx_opt_args_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_Q_inverse *__pyx_optional_args); /* proto*/
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/* Module declarations from 'cpython.buffer' */
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/* Module declarations from 'libc.string' */
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|
/* Module declarations from 'libc.stdio' */
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/* Module declarations from '__builtin__' */
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|
/* Module declarations from 'cpython.type' */
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static PyTypeObject *__pyx_ptype_7cpython_4type_type = 0;
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|
|
/* Module declarations from 'cpython' */
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|
|
/* Module declarations from 'cpython.object' */
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|
/* Module declarations from 'cpython.ref' */
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/* Module declarations from 'cpython.mem' */
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/* Module declarations from 'numpy' */
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|
/* Module declarations from 'numpy' */
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|
static PyTypeObject *__pyx_ptype_5numpy_dtype = 0;
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|
static PyTypeObject *__pyx_ptype_5numpy_flatiter = 0;
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|
static PyTypeObject *__pyx_ptype_5numpy_broadcast = 0;
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|
static PyTypeObject *__pyx_ptype_5numpy_ndarray = 0;
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|
static PyTypeObject *__pyx_ptype_5numpy_generic = 0;
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|
static PyTypeObject *__pyx_ptype_5numpy_number = 0;
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|
static PyTypeObject *__pyx_ptype_5numpy_integer = 0;
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|
static PyTypeObject *__pyx_ptype_5numpy_signedinteger = 0;
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|
static PyTypeObject *__pyx_ptype_5numpy_unsignedinteger = 0;
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|
static PyTypeObject *__pyx_ptype_5numpy_inexact = 0;
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|
static PyTypeObject *__pyx_ptype_5numpy_floating = 0;
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|
static PyTypeObject *__pyx_ptype_5numpy_complexfloating = 0;
|
|
static PyTypeObject *__pyx_ptype_5numpy_flexible = 0;
|
|
static PyTypeObject *__pyx_ptype_5numpy_character = 0;
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|
static PyTypeObject *__pyx_ptype_5numpy_ufunc = 0;
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/* Module declarations from 'cython' */
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|
/* Module declarations from 'GPy.models.state_space_cython' */
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|
static PyTypeObject *__pyx_ptype_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython = 0;
|
|
static PyTypeObject *__pyx_ptype_3GPy_6models_18state_space_cython_Measurement_Callables_Cython = 0;
|
|
static PyTypeObject *__pyx_ptype_3GPy_6models_18state_space_cython_R_handling_Cython = 0;
|
|
static PyTypeObject *__pyx_ptype_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython = 0;
|
|
static PyTypeObject *__pyx_ptype_3GPy_6models_18state_space_cython_Q_handling_Cython = 0;
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|
static PyTypeObject *__pyx_ptype_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython = 0;
|
|
static PyTypeObject *__pyx_ptype_3GPy_6models_18state_space_cython_AQcompute_batch_Cython = 0;
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|
static PyObject *__pyx_f_3GPy_6models_18state_space_cython___pyx_unpickle_Dynamic_Callables_Cython__set_state(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *, PyObject *); /*proto*/
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|
static PyObject *__pyx_f_3GPy_6models_18state_space_cython___pyx_unpickle_Measurement_Callables_Cython__set_state(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *, PyObject *); /*proto*/
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|
static PyObject *__pyx_f_3GPy_6models_18state_space_cython___pyx_unpickle_R_handling_Cython__set_state(struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython *, PyObject *); /*proto*/
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|
static PyObject *__pyx_f_3GPy_6models_18state_space_cython___pyx_unpickle_Std_Measurement_Callables_Cython__set_state(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *, PyObject *); /*proto*/
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|
static PyObject *__pyx_f_3GPy_6models_18state_space_cython___pyx_unpickle_Q_handling_Cython__set_state(struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython *, PyObject *); /*proto*/
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|
static PyObject *__pyx_f_3GPy_6models_18state_space_cython___pyx_unpickle_Std_Dynamic_Callables_Cython__set_state(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *, PyObject *); /*proto*/
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|
static PyObject *__pyx_f_3GPy_6models_18state_space_cython___pyx_unpickle_AQcompute_batch_Cython__set_state(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *, PyObject *); /*proto*/
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|
static __Pyx_TypeInfo __Pyx_TypeInfo_nn___pyx_t_3GPy_6models_18state_space_cython_DTYPE_t = { "DTYPE_t", NULL, sizeof(__pyx_t_3GPy_6models_18state_space_cython_DTYPE_t), { 0 }, 0, 'R', 0, 0 };
|
|
static __Pyx_TypeInfo __Pyx_TypeInfo_nn___pyx_t_3GPy_6models_18state_space_cython_DTYPE_int_t = { "DTYPE_int_t", NULL, sizeof(__pyx_t_3GPy_6models_18state_space_cython_DTYPE_int_t), { 0 }, 0, IS_UNSIGNED(__pyx_t_3GPy_6models_18state_space_cython_DTYPE_int_t) ? 'U' : 'I', IS_UNSIGNED(__pyx_t_3GPy_6models_18state_space_cython_DTYPE_int_t), 0 };
|
|
#define __Pyx_MODULE_NAME "GPy.models.state_space_cython"
|
|
extern int __pyx_module_is_main_GPy__models__state_space_cython;
|
|
int __pyx_module_is_main_GPy__models__state_space_cython = 0;
|
|
|
|
/* Implementation of 'GPy.models.state_space_cython' */
|
|
static PyObject *__pyx_builtin_NotImplemented;
|
|
static PyObject *__pyx_builtin_ValueError;
|
|
static PyObject *__pyx_builtin_super;
|
|
static PyObject *__pyx_builtin_range;
|
|
static PyObject *__pyx_builtin_ImportError;
|
|
static const char __pyx_k_A[] = "A";
|
|
static const char __pyx_k_H[] = "H";
|
|
static const char __pyx_k_K[] = "K";
|
|
static const char __pyx_k_M[] = "M";
|
|
static const char __pyx_k_P[] = "P";
|
|
static const char __pyx_k_Q[] = "Q";
|
|
static const char __pyx_k_R[] = "R";
|
|
static const char __pyx_k_S[] = "S";
|
|
static const char __pyx_k_T[] = "T";
|
|
static const char __pyx_k_U[] = "U";
|
|
static const char __pyx_k_X[] = "X";
|
|
static const char __pyx_k_Y[] = "Y";
|
|
static const char __pyx_k_j[] = "j";
|
|
static const char __pyx_k_k[] = "k";
|
|
static const char __pyx_k_m[] = "m";
|
|
static const char __pyx_k_v[] = "v";
|
|
static const char __pyx_k_Ak[] = "Ak";
|
|
static const char __pyx_k_As[] = "As";
|
|
static const char __pyx_k_Hk[] = "Hk";
|
|
static const char __pyx_k_Qk[] = "Qk";
|
|
static const char __pyx_k_Qs[] = "Qs";
|
|
static const char __pyx_k_Rk[] = "Rk";
|
|
static const char __pyx_k_Vh[] = "Vh";
|
|
static const char __pyx_k_dA[] = "dA";
|
|
static const char __pyx_k_dH[] = "dH";
|
|
static const char __pyx_k_dK[] = "dK";
|
|
static const char __pyx_k_dQ[] = "dQ";
|
|
static const char __pyx_k_dR[] = "dR";
|
|
static const char __pyx_k_dS[] = "dS";
|
|
static const char __pyx_k_dv[] = "dv";
|
|
static const char __pyx_k_np[] = "np";
|
|
static const char __pyx_k_pi[] = "pi";
|
|
static const char __pyx_k_sp[] = "sp";
|
|
static const char __pyx_k_all[] = "all";
|
|
static const char __pyx_k_any[] = "any";
|
|
static const char __pyx_k_dAk[] = "dAk";
|
|
static const char __pyx_k_dAs[] = "dAs";
|
|
static const char __pyx_k_dHk[] = "dHk";
|
|
static const char __pyx_k_dQk[] = "dQk";
|
|
static const char __pyx_k_dQs[] = "dQs";
|
|
static const char __pyx_k_dRk[] = "dRk";
|
|
static const char __pyx_k_dot[] = "dot";
|
|
static const char __pyx_k_f_a[] = "f_a";
|
|
static const char __pyx_k_f_h[] = "f_h";
|
|
static const char __pyx_k_log[] = "log";
|
|
static const char __pyx_k_new[] = "__new__";
|
|
static const char __pyx_k_p_P[] = "p_P";
|
|
static const char __pyx_k_p_m[] = "p_m";
|
|
static const char __pyx_k_res[] = "res";
|
|
static const char __pyx_k_ret[] = "ret";
|
|
static const char __pyx_k_sum[] = "sum";
|
|
static const char __pyx_k_svd[] = "svd";
|
|
static const char __pyx_k_Q_sr[] = "Q_sr";
|
|
static const char __pyx_k_axis[] = "axis";
|
|
static const char __pyx_k_diag[] = "diag";
|
|
static const char __pyx_k_dict[] = "__dict__";
|
|
static const char __pyx_k_init[] = "__init__";
|
|
static const char __pyx_k_main[] = "__main__";
|
|
static const char __pyx_k_name[] = "__name__";
|
|
static const char __pyx_k_p_dP[] = "p_dP";
|
|
static const char __pyx_k_p_dm[] = "p_dm";
|
|
static const char __pyx_k_sqrt[] = "sqrt";
|
|
static const char __pyx_k_test[] = "__test__";
|
|
static const char __pyx_k_tmp1[] = "tmp1";
|
|
static const char __pyx_k_tmp2[] = "tmp2";
|
|
static const char __pyx_k_tmp3[] = "tmp3";
|
|
static const char __pyx_k_tmp5[] = "tmp5";
|
|
static const char __pyx_k_DTYPE[] = "DTYPE";
|
|
static const char __pyx_k_P_upd[] = "P_upd";
|
|
static const char __pyx_k_Q_srk[] = "Q_srk";
|
|
static const char __pyx_k_R_isr[] = "R_isr";
|
|
static const char __pyx_k_S_new[] = "S_new";
|
|
static const char __pyx_k_S_old[] = "S_old";
|
|
static const char __pyx_k_S_svd[] = "S_svd";
|
|
static const char __pyx_k_S_upd[] = "S_upd";
|
|
static const char __pyx_k_U_upd[] = "U_upd";
|
|
static const char __pyx_k_V_new[] = "V_new";
|
|
static const char __pyx_k_V_old[] = "V_old";
|
|
static const char __pyx_k_dtype[] = "dtype";
|
|
static const char __pyx_k_empty[] = "empty";
|
|
static const char __pyx_k_index[] = "index";
|
|
static const char __pyx_k_int64[] = "int64";
|
|
static const char __pyx_k_isnan[] = "isnan";
|
|
static const char __pyx_k_m_upd[] = "m_upd";
|
|
static const char __pyx_k_numpy[] = "numpy";
|
|
static const char __pyx_k_param[] = "param";
|
|
static const char __pyx_k_range[] = "range";
|
|
static const char __pyx_k_reset[] = "reset";
|
|
static const char __pyx_k_scipy[] = "scipy";
|
|
static const char __pyx_k_shape[] = "shape";
|
|
static const char __pyx_k_super[] = "super";
|
|
static const char __pyx_k_zeros[] = "zeros";
|
|
static const char __pyx_k_P_init[] = "P_init";
|
|
static const char __pyx_k_P_pred[] = "P_pred";
|
|
static const char __pyx_k_R_isrk[] = "R_isrk";
|
|
static const char __pyx_k_S_pred[] = "S_pred";
|
|
static const char __pyx_k_V_pred[] = "V_pred";
|
|
static const char __pyx_k_dP_upd[] = "dP_upd";
|
|
static const char __pyx_k_dm_upd[] = "dm_upd";
|
|
static const char __pyx_k_import[] = "__import__";
|
|
static const char __pyx_k_jitter[] = "jitter";
|
|
static const char __pyx_k_linalg[] = "linalg";
|
|
static const char __pyx_k_m_init[] = "m_init";
|
|
static const char __pyx_k_m_pred[] = "m_pred";
|
|
static const char __pyx_k_nbytes[] = "nbytes";
|
|
static const char __pyx_k_pickle[] = "pickle";
|
|
static const char __pyx_k_reduce[] = "__reduce__";
|
|
static const char __pyx_k_unique[] = "unique";
|
|
static const char __pyx_k_update[] = "update";
|
|
static const char __pyx_k_vstack[] = "vstack";
|
|
static const char __pyx_k_dP_init[] = "dP_init";
|
|
static const char __pyx_k_dP_pred[] = "dP_pred";
|
|
static const char __pyx_k_dm_init[] = "dm_init";
|
|
static const char __pyx_k_dm_pred[] = "dm_pred";
|
|
static const char __pyx_k_float64[] = "float64";
|
|
static const char __pyx_k_regular[] = "regular";
|
|
static const char __pyx_k_Prev_cov[] = "Prev_cov";
|
|
static const char __pyx_k_getstate[] = "__getstate__";
|
|
static const char __pyx_k_pyx_type[] = "__pyx_type";
|
|
static const char __pyx_k_setstate[] = "__setstate__";
|
|
static const char __pyx_k_steps_no[] = "steps_no";
|
|
static const char __pyx_k_DTYPE_int[] = "DTYPE_int";
|
|
static const char __pyx_k_Q_inverse[] = "Q_inverse";
|
|
static const char __pyx_k_prev_mean[] = "prev_mean";
|
|
static const char __pyx_k_pyx_state[] = "__pyx_state";
|
|
static const char __pyx_k_reduce_ex[] = "__reduce_ex__";
|
|
static const char __pyx_k_state_dim[] = "state_dim";
|
|
static const char __pyx_k_ValueError[] = "ValueError";
|
|
static const char __pyx_k_compute_uv[] = "compute_uv";
|
|
static const char __pyx_k_pyx_result[] = "__pyx_result";
|
|
static const char __pyx_k_pyx_vtable[] = "__pyx_vtable__";
|
|
static const char __pyx_k_svd_1_matr[] = "svd_1_matr";
|
|
static const char __pyx_k_svd_2_matr[] = "svd_2_matr";
|
|
static const char __pyx_k_ImportError[] = "ImportError";
|
|
static const char __pyx_k_PickleError[] = "PickleError";
|
|
static const char __pyx_k_measurement[] = "measurement";
|
|
static const char __pyx_k_overwrite_a[] = "overwrite_a";
|
|
static const char __pyx_k_check_finite[] = "check_finite";
|
|
static const char __pyx_k_k_measurment[] = "k_measurment";
|
|
static const char __pyx_k_param_number[] = "param_number";
|
|
static const char __pyx_k_pyx_checksum[] = "__pyx_checksum";
|
|
static const char __pyx_k_stringsource[] = "stringsource";
|
|
static const char __pyx_k_dA_all_params[] = "dA_all_params";
|
|
static const char __pyx_k_dH_all_params[] = "dH_all_params";
|
|
static const char __pyx_k_dQ_all_params[] = "dQ_all_params";
|
|
static const char __pyx_k_dR_all_params[] = "dR_all_params";
|
|
static const char __pyx_k_full_matrices[] = "full_matrices";
|
|
static const char __pyx_k_reduce_cython[] = "__reduce_cython__";
|
|
static const char __pyx_k_NotImplemented[] = "NotImplemented";
|
|
static const char __pyx_k_Q_inverse_dict[] = "Q_inverse_dict";
|
|
static const char __pyx_k_grad_params_no[] = "grad_params_no";
|
|
static const char __pyx_k_log_likelihood[] = "log_likelihood";
|
|
static const char __pyx_k_time_series_no[] = "time_series_no";
|
|
static const char __pyx_k_pyx_PickleError[] = "__pyx_PickleError";
|
|
static const char __pyx_k_setstate_cython[] = "__setstate_cython__";
|
|
static const char __pyx_k_unique_Q_number[] = "unique_Q_number";
|
|
static const char __pyx_k_unique_R_number[] = "unique_R_number";
|
|
static const char __pyx_k_A_time_var_index[] = "A_time_var_index";
|
|
static const char __pyx_k_H_time_var_index[] = "H_time_var_index";
|
|
static const char __pyx_k_Q_time_var_index[] = "Q_time_var_index";
|
|
static const char __pyx_k_R_time_var_index[] = "R_time_var_index";
|
|
static const char __pyx_k_Q_handling_Cython[] = "Q_handling_Cython";
|
|
static const char __pyx_k_R_handling_Cython[] = "R_handling_Cython";
|
|
static const char __pyx_k_p_unique_Q_number[] = "p_unique_Q_number";
|
|
static const char __pyx_k_p_unique_R_number[] = "p_unique_R_number";
|
|
static const char __pyx_k_Q_square_root_dict[] = "Q_square_root_dict";
|
|
static const char __pyx_k_cline_in_traceback[] = "cline_in_traceback";
|
|
static const char __pyx_k_dP_pred_all_params[] = "dP_pred_all_params";
|
|
static const char __pyx_k_dm_pred_all_params[] = "dm_pred_all_params";
|
|
static const char __pyx_k_total_size_of_data[] = "total_size_of_data";
|
|
static const char __pyx_k_calc_log_likelihood[] = "calc_log_likelihood";
|
|
static const char __pyx_k_compute_derivatives[] = "compute_derivatives";
|
|
static const char __pyx_k_grad_log_likelihood[] = "grad_log_likelihood";
|
|
static const char __pyx_k_p_dynamic_callables[] = "p_dynamic_callables";
|
|
static const char __pyx_k_reconstruct_indices[] = "reconstruct_indices";
|
|
static const char __pyx_k_p_kalman_filter_type[] = "p_kalman_filter_type";
|
|
static const char __pyx_k_dA_derivative_is_None[] = "dA derivative is None";
|
|
static const char __pyx_k_dH_derivative_is_None[] = "dH derivative is None";
|
|
static const char __pyx_k_dQ_derivative_is_None[] = "dQ derivative is None";
|
|
static const char __pyx_k_dR_derivative_is_None[] = "dR derivative is None";
|
|
static const char __pyx_k_log_likelihood_update[] = "log_likelihood_update";
|
|
static const char __pyx_k_AQcompute_batch_Cython[] = "AQcompute_batch_Cython";
|
|
static const char __pyx_k_measurement_dim_gt_one[] = "measurement_dim_gt_one";
|
|
static const char __pyx_k_d_log_likelihood_update[] = "d_log_likelihood_update";
|
|
static const char __pyx_k_p_measurement_callables[] = "p_measurement_callables";
|
|
static const char __pyx_k_Dynamic_Callables_Cython[] = "Dynamic_Callables_Cython";
|
|
static const char __pyx_k_calc_grad_log_likelihood[] = "calc_grad_log_likelihood";
|
|
static const char __pyx_k_Measurement_Callables_Cython[] = "Measurement_Callables_Cython";
|
|
static const char __pyx_k_Std_Dynamic_Callables_Cython[] = "Std_Dynamic_Callables_Cython";
|
|
static const char __pyx_k_cython_Ak_is_not_implemented[] = "(cython) Ak is not implemented!";
|
|
static const char __pyx_k_cython_Hk_is_not_implemented[] = "(cython) Hk is not implemented!";
|
|
static const char __pyx_k_cython_Qk_is_not_implemented[] = "(cython) Qk is not implemented!";
|
|
static const char __pyx_k_cython_Rk_is_not_implemented[] = "(cython) Rk is not implemented!";
|
|
static const char __pyx_k_GPy_models_state_space_cython[] = "GPy.models.state_space_cython";
|
|
static const char __pyx_k_cython_dAk_is_not_implemented[] = "(cython) dAk is not implemented!";
|
|
static const char __pyx_k_cython_dQk_is_not_implemented[] = "(cython) dQk is not implemented!";
|
|
static const char __pyx_k_cython_f_a_is_not_implemented[] = "(cython) f_a is not implemented!";
|
|
static const char __pyx_k_kalman_update_step_SVD_Cython[] = "_kalman_update_step_SVD_Cython";
|
|
static const char __pyx_k_pyx_unpickle_AQcompute_batch_C[] = "__pyx_unpickle_AQcompute_batch_Cython";
|
|
static const char __pyx_k_pyx_unpickle_Dynamic_Callables[] = "__pyx_unpickle_Dynamic_Callables_Cython";
|
|
static const char __pyx_k_pyx_unpickle_Measurement_Calla[] = "__pyx_unpickle_Measurement_Callables_Cython";
|
|
static const char __pyx_k_pyx_unpickle_Q_handling_Cython[] = "__pyx_unpickle_Q_handling_Cython";
|
|
static const char __pyx_k_pyx_unpickle_R_handling_Cython[] = "__pyx_unpickle_R_handling_Cython";
|
|
static const char __pyx_k_pyx_unpickle_Std_Dynamic_Calla[] = "__pyx_unpickle_Std_Dynamic_Callables_Cython";
|
|
static const char __pyx_k_pyx_unpickle_Std_Measurement_C[] = "__pyx_unpickle_Std_Measurement_Callables_Cython";
|
|
static const char __pyx_k_Contains_some_cython_code_for_s[] = "\nContains some cython code for state space modelling.\n";
|
|
static const char __pyx_k_Nan_values_in_likelihood_update[] = "Nan values in likelihood update!";
|
|
static const char __pyx_k_cont_discr_kalman_filter_raw_Cy[] = "_cont_discr_kalman_filter_raw_Cython";
|
|
static const char __pyx_k_cython_Q_srk_is_not_implemented[] = "(cython) Q_srk is not implemented!";
|
|
static const char __pyx_k_cython_reset_is_not_implemented[] = "(cython) reset is not implemented!";
|
|
static const char __pyx_k_kalman_prediction_step_SVD_Cyth[] = "_kalman_prediction_step_SVD_Cython";
|
|
static const char __pyx_k_numpy_core_multiarray_failed_to[] = "numpy.core.multiarray failed to import";
|
|
static const char __pyx_k_GPy_models_state_space_cython_py[] = "GPy/models/state_space_cython.pyx";
|
|
static const char __pyx_k_Incompatible_checksums_s_vs_0x14[] = "Incompatible checksums (%s vs 0x146e1f7 = (As, Q, Q_square_root, Q_svd_dict, Q_time_var_index, Qs, dAs, dQ, dQs, index, last_k, reconstruct_indices, svd_each_time))";
|
|
static const char __pyx_k_Incompatible_checksums_s_vs_0x70[] = "Incompatible checksums (%s vs 0x706c35f = (H, H_time_var_index, R, R_square_root, R_time_var_index, dH, dR, index, svd_each_time))";
|
|
static const char __pyx_k_Incompatible_checksums_s_vs_0x77[] = "Incompatible checksums (%s vs 0x77b5360 = (Q, Q_square_root, Q_time_var_index, dQ, index, svd_each_time))";
|
|
static const char __pyx_k_Incompatible_checksums_s_vs_0x9e[] = "Incompatible checksums (%s vs 0x9e97ca7 = (R, R_square_root, R_time_var_index, dR, index, svd_each_time))";
|
|
static const char __pyx_k_Incompatible_checksums_s_vs_0xd4[] = "Incompatible checksums (%s vs 0xd41d8cd = ())";
|
|
static const char __pyx_k_Incompatible_checksums_s_vs_0xdf[] = "Incompatible checksums (%s vs 0xdff0f56 = (A, A_time_var_index, Q, Q_square_root, Q_time_var_index, dA, dQ, index, svd_each_time))";
|
|
static const char __pyx_k_Kalman_Filter_Update_SVD_S_is_ne[] = "Kalman Filter Update SVD: S is negative step %i";
|
|
static const char __pyx_k_Measurement_dimension_larger_the[] = "Measurement dimension larger then 1 is currently not supported";
|
|
static const char __pyx_k_Nan_measurements_are_currently_n[] = "Nan measurements are currently not supported if\n they are intermixed with not NaN measurements";
|
|
static const char __pyx_k_Std_Measurement_Callables_Cython[] = "Std_Measurement_Callables_Cython";
|
|
static const char __pyx_k_numpy_core_umath_failed_to_impor[] = "numpy.core.umath failed to import";
|
|
static PyObject *__pyx_n_s_A;
|
|
static PyObject *__pyx_n_s_AQcompute_batch_Cython;
|
|
static PyObject *__pyx_n_s_A_time_var_index;
|
|
static PyObject *__pyx_n_s_Ak;
|
|
static PyObject *__pyx_n_s_As;
|
|
static PyObject *__pyx_n_s_DTYPE;
|
|
static PyObject *__pyx_n_s_DTYPE_int;
|
|
static PyObject *__pyx_n_s_Dynamic_Callables_Cython;
|
|
static PyObject *__pyx_n_s_GPy_models_state_space_cython;
|
|
static PyObject *__pyx_kp_s_GPy_models_state_space_cython_py;
|
|
static PyObject *__pyx_n_s_H;
|
|
static PyObject *__pyx_n_s_H_time_var_index;
|
|
static PyObject *__pyx_n_s_Hk;
|
|
static PyObject *__pyx_n_s_ImportError;
|
|
static PyObject *__pyx_kp_s_Incompatible_checksums_s_vs_0x14;
|
|
static PyObject *__pyx_kp_s_Incompatible_checksums_s_vs_0x70;
|
|
static PyObject *__pyx_kp_s_Incompatible_checksums_s_vs_0x77;
|
|
static PyObject *__pyx_kp_s_Incompatible_checksums_s_vs_0x9e;
|
|
static PyObject *__pyx_kp_s_Incompatible_checksums_s_vs_0xd4;
|
|
static PyObject *__pyx_kp_s_Incompatible_checksums_s_vs_0xdf;
|
|
static PyObject *__pyx_n_s_K;
|
|
static PyObject *__pyx_kp_s_Kalman_Filter_Update_SVD_S_is_ne;
|
|
static PyObject *__pyx_n_s_M;
|
|
static PyObject *__pyx_n_s_Measurement_Callables_Cython;
|
|
static PyObject *__pyx_kp_s_Measurement_dimension_larger_the;
|
|
static PyObject *__pyx_kp_s_Nan_measurements_are_currently_n;
|
|
static PyObject *__pyx_kp_s_Nan_values_in_likelihood_update;
|
|
static PyObject *__pyx_n_s_NotImplemented;
|
|
static PyObject *__pyx_n_s_P;
|
|
static PyObject *__pyx_n_s_P_init;
|
|
static PyObject *__pyx_n_s_P_pred;
|
|
static PyObject *__pyx_n_s_P_upd;
|
|
static PyObject *__pyx_n_s_PickleError;
|
|
static PyObject *__pyx_n_s_Prev_cov;
|
|
static PyObject *__pyx_n_s_Q;
|
|
static PyObject *__pyx_n_s_Q_handling_Cython;
|
|
static PyObject *__pyx_n_s_Q_inverse;
|
|
static PyObject *__pyx_n_s_Q_inverse_dict;
|
|
static PyObject *__pyx_n_s_Q_square_root_dict;
|
|
static PyObject *__pyx_n_s_Q_sr;
|
|
static PyObject *__pyx_n_s_Q_srk;
|
|
static PyObject *__pyx_n_s_Q_time_var_index;
|
|
static PyObject *__pyx_n_s_Qk;
|
|
static PyObject *__pyx_n_s_Qs;
|
|
static PyObject *__pyx_n_s_R;
|
|
static PyObject *__pyx_n_s_R_handling_Cython;
|
|
static PyObject *__pyx_n_s_R_isr;
|
|
static PyObject *__pyx_n_s_R_isrk;
|
|
static PyObject *__pyx_n_s_R_time_var_index;
|
|
static PyObject *__pyx_n_s_Rk;
|
|
static PyObject *__pyx_n_s_S;
|
|
static PyObject *__pyx_n_s_S_new;
|
|
static PyObject *__pyx_n_s_S_old;
|
|
static PyObject *__pyx_n_s_S_pred;
|
|
static PyObject *__pyx_n_s_S_svd;
|
|
static PyObject *__pyx_n_s_S_upd;
|
|
static PyObject *__pyx_n_s_Std_Dynamic_Callables_Cython;
|
|
static PyObject *__pyx_n_s_Std_Measurement_Callables_Cython;
|
|
static PyObject *__pyx_n_s_T;
|
|
static PyObject *__pyx_n_s_U;
|
|
static PyObject *__pyx_n_s_U_upd;
|
|
static PyObject *__pyx_n_s_V_new;
|
|
static PyObject *__pyx_n_s_V_old;
|
|
static PyObject *__pyx_n_s_V_pred;
|
|
static PyObject *__pyx_n_s_ValueError;
|
|
static PyObject *__pyx_n_s_Vh;
|
|
static PyObject *__pyx_n_s_X;
|
|
static PyObject *__pyx_n_s_Y;
|
|
static PyObject *__pyx_n_s_all;
|
|
static PyObject *__pyx_n_s_any;
|
|
static PyObject *__pyx_n_s_axis;
|
|
static PyObject *__pyx_n_s_calc_grad_log_likelihood;
|
|
static PyObject *__pyx_n_s_calc_log_likelihood;
|
|
static PyObject *__pyx_n_s_check_finite;
|
|
static PyObject *__pyx_n_s_cline_in_traceback;
|
|
static PyObject *__pyx_n_s_compute_derivatives;
|
|
static PyObject *__pyx_n_s_compute_uv;
|
|
static PyObject *__pyx_n_s_cont_discr_kalman_filter_raw_Cy;
|
|
static PyObject *__pyx_kp_s_cython_Ak_is_not_implemented;
|
|
static PyObject *__pyx_kp_s_cython_Hk_is_not_implemented;
|
|
static PyObject *__pyx_kp_s_cython_Q_srk_is_not_implemented;
|
|
static PyObject *__pyx_kp_s_cython_Qk_is_not_implemented;
|
|
static PyObject *__pyx_kp_s_cython_Rk_is_not_implemented;
|
|
static PyObject *__pyx_kp_s_cython_dAk_is_not_implemented;
|
|
static PyObject *__pyx_kp_s_cython_dQk_is_not_implemented;
|
|
static PyObject *__pyx_kp_s_cython_f_a_is_not_implemented;
|
|
static PyObject *__pyx_kp_s_cython_reset_is_not_implemented;
|
|
static PyObject *__pyx_n_s_dA;
|
|
static PyObject *__pyx_n_s_dA_all_params;
|
|
static PyObject *__pyx_kp_s_dA_derivative_is_None;
|
|
static PyObject *__pyx_n_s_dAk;
|
|
static PyObject *__pyx_n_s_dAs;
|
|
static PyObject *__pyx_n_s_dH;
|
|
static PyObject *__pyx_n_s_dH_all_params;
|
|
static PyObject *__pyx_kp_s_dH_derivative_is_None;
|
|
static PyObject *__pyx_n_s_dHk;
|
|
static PyObject *__pyx_n_s_dK;
|
|
static PyObject *__pyx_n_s_dP_init;
|
|
static PyObject *__pyx_n_s_dP_pred;
|
|
static PyObject *__pyx_n_s_dP_pred_all_params;
|
|
static PyObject *__pyx_n_s_dP_upd;
|
|
static PyObject *__pyx_n_s_dQ;
|
|
static PyObject *__pyx_n_s_dQ_all_params;
|
|
static PyObject *__pyx_kp_s_dQ_derivative_is_None;
|
|
static PyObject *__pyx_n_s_dQk;
|
|
static PyObject *__pyx_n_s_dQs;
|
|
static PyObject *__pyx_n_s_dR;
|
|
static PyObject *__pyx_n_s_dR_all_params;
|
|
static PyObject *__pyx_kp_s_dR_derivative_is_None;
|
|
static PyObject *__pyx_n_s_dRk;
|
|
static PyObject *__pyx_n_s_dS;
|
|
static PyObject *__pyx_n_s_d_log_likelihood_update;
|
|
static PyObject *__pyx_n_s_diag;
|
|
static PyObject *__pyx_n_s_dict;
|
|
static PyObject *__pyx_n_s_dm_init;
|
|
static PyObject *__pyx_n_s_dm_pred;
|
|
static PyObject *__pyx_n_s_dm_pred_all_params;
|
|
static PyObject *__pyx_n_s_dm_upd;
|
|
static PyObject *__pyx_n_s_dot;
|
|
static PyObject *__pyx_n_s_dtype;
|
|
static PyObject *__pyx_n_s_dv;
|
|
static PyObject *__pyx_n_s_empty;
|
|
static PyObject *__pyx_n_s_f_a;
|
|
static PyObject *__pyx_n_s_f_h;
|
|
static PyObject *__pyx_n_s_float64;
|
|
static PyObject *__pyx_n_s_full_matrices;
|
|
static PyObject *__pyx_n_s_getstate;
|
|
static PyObject *__pyx_n_s_grad_log_likelihood;
|
|
static PyObject *__pyx_n_s_grad_params_no;
|
|
static PyObject *__pyx_n_s_import;
|
|
static PyObject *__pyx_n_s_index;
|
|
static PyObject *__pyx_n_s_init;
|
|
static PyObject *__pyx_n_s_int64;
|
|
static PyObject *__pyx_n_s_isnan;
|
|
static PyObject *__pyx_n_s_j;
|
|
static PyObject *__pyx_n_s_jitter;
|
|
static PyObject *__pyx_n_s_k;
|
|
static PyObject *__pyx_n_s_k_measurment;
|
|
static PyObject *__pyx_n_s_kalman_prediction_step_SVD_Cyth;
|
|
static PyObject *__pyx_n_s_kalman_update_step_SVD_Cython;
|
|
static PyObject *__pyx_n_s_linalg;
|
|
static PyObject *__pyx_n_s_log;
|
|
static PyObject *__pyx_n_s_log_likelihood;
|
|
static PyObject *__pyx_n_s_log_likelihood_update;
|
|
static PyObject *__pyx_n_s_m;
|
|
static PyObject *__pyx_n_s_m_init;
|
|
static PyObject *__pyx_n_s_m_pred;
|
|
static PyObject *__pyx_n_s_m_upd;
|
|
static PyObject *__pyx_n_s_main;
|
|
static PyObject *__pyx_n_s_measurement;
|
|
static PyObject *__pyx_n_s_measurement_dim_gt_one;
|
|
static PyObject *__pyx_n_s_name;
|
|
static PyObject *__pyx_n_s_nbytes;
|
|
static PyObject *__pyx_n_s_new;
|
|
static PyObject *__pyx_n_s_np;
|
|
static PyObject *__pyx_n_s_numpy;
|
|
static PyObject *__pyx_kp_s_numpy_core_multiarray_failed_to;
|
|
static PyObject *__pyx_kp_s_numpy_core_umath_failed_to_impor;
|
|
static PyObject *__pyx_n_s_overwrite_a;
|
|
static PyObject *__pyx_n_s_p_P;
|
|
static PyObject *__pyx_n_s_p_dP;
|
|
static PyObject *__pyx_n_s_p_dm;
|
|
static PyObject *__pyx_n_s_p_dynamic_callables;
|
|
static PyObject *__pyx_n_s_p_kalman_filter_type;
|
|
static PyObject *__pyx_n_s_p_m;
|
|
static PyObject *__pyx_n_s_p_measurement_callables;
|
|
static PyObject *__pyx_n_s_p_unique_Q_number;
|
|
static PyObject *__pyx_n_s_p_unique_R_number;
|
|
static PyObject *__pyx_n_s_param;
|
|
static PyObject *__pyx_n_s_param_number;
|
|
static PyObject *__pyx_n_s_pi;
|
|
static PyObject *__pyx_n_s_pickle;
|
|
static PyObject *__pyx_n_s_prev_mean;
|
|
static PyObject *__pyx_n_s_pyx_PickleError;
|
|
static PyObject *__pyx_n_s_pyx_checksum;
|
|
static PyObject *__pyx_n_s_pyx_result;
|
|
static PyObject *__pyx_n_s_pyx_state;
|
|
static PyObject *__pyx_n_s_pyx_type;
|
|
static PyObject *__pyx_n_s_pyx_unpickle_AQcompute_batch_C;
|
|
static PyObject *__pyx_n_s_pyx_unpickle_Dynamic_Callables;
|
|
static PyObject *__pyx_n_s_pyx_unpickle_Measurement_Calla;
|
|
static PyObject *__pyx_n_s_pyx_unpickle_Q_handling_Cython;
|
|
static PyObject *__pyx_n_s_pyx_unpickle_R_handling_Cython;
|
|
static PyObject *__pyx_n_s_pyx_unpickle_Std_Dynamic_Calla;
|
|
static PyObject *__pyx_n_s_pyx_unpickle_Std_Measurement_C;
|
|
static PyObject *__pyx_n_s_pyx_vtable;
|
|
static PyObject *__pyx_n_s_range;
|
|
static PyObject *__pyx_n_s_reconstruct_indices;
|
|
static PyObject *__pyx_n_s_reduce;
|
|
static PyObject *__pyx_n_s_reduce_cython;
|
|
static PyObject *__pyx_n_s_reduce_ex;
|
|
static PyObject *__pyx_n_s_regular;
|
|
static PyObject *__pyx_n_s_res;
|
|
static PyObject *__pyx_n_s_reset;
|
|
static PyObject *__pyx_n_s_ret;
|
|
static PyObject *__pyx_n_s_scipy;
|
|
static PyObject *__pyx_n_s_setstate;
|
|
static PyObject *__pyx_n_s_setstate_cython;
|
|
static PyObject *__pyx_n_s_shape;
|
|
static PyObject *__pyx_n_s_sp;
|
|
static PyObject *__pyx_n_s_sqrt;
|
|
static PyObject *__pyx_n_s_state_dim;
|
|
static PyObject *__pyx_n_s_steps_no;
|
|
static PyObject *__pyx_kp_s_stringsource;
|
|
static PyObject *__pyx_n_s_sum;
|
|
static PyObject *__pyx_n_s_super;
|
|
static PyObject *__pyx_n_s_svd;
|
|
static PyObject *__pyx_n_s_svd_1_matr;
|
|
static PyObject *__pyx_n_s_svd_2_matr;
|
|
static PyObject *__pyx_n_s_test;
|
|
static PyObject *__pyx_n_s_time_series_no;
|
|
static PyObject *__pyx_n_s_tmp1;
|
|
static PyObject *__pyx_n_s_tmp2;
|
|
static PyObject *__pyx_n_s_tmp3;
|
|
static PyObject *__pyx_n_s_tmp5;
|
|
static PyObject *__pyx_n_s_total_size_of_data;
|
|
static PyObject *__pyx_n_s_unique;
|
|
static PyObject *__pyx_n_s_unique_Q_number;
|
|
static PyObject *__pyx_n_s_unique_R_number;
|
|
static PyObject *__pyx_n_s_update;
|
|
static PyObject *__pyx_n_s_v;
|
|
static PyObject *__pyx_n_s_vstack;
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static PyObject *__pyx_n_s_zeros;
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_f_a(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_k, PyArrayObject *__pyx_v_m, PyArrayObject *__pyx_v_A); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_2Ak(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_k, PyArrayObject *__pyx_v_m, PyArrayObject *__pyx_v_P); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_4Qk(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_k); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_6Q_srk(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_k); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_8dAk(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_k); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_10dQk(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_k); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_12reset(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_compute_derivatives); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_14__reduce_cython__(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_self); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_16__setstate_cython__(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_self, PyObject *__pyx_v___pyx_state); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_f_h(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_self, int __pyx_v_k, PyArrayObject *__pyx_v_m_pred, PyArrayObject *__pyx_v_Hk); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_2Hk(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_self, int __pyx_v_k, PyArrayObject *__pyx_v_m_pred, PyArrayObject *__pyx_v_P_pred); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_4Rk(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_self, int __pyx_v_k); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_6R_isrk(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_self, int __pyx_v_k); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_8dHk(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_self, int __pyx_v_k); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_10dRk(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_self, int __pyx_v_k); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_12reset(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_self, PyObject *__pyx_v_compute_derivatives); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_14__reduce_cython__(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_self); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_16__setstate_cython__(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_self, PyObject *__pyx_v___pyx_state); /* proto */
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static int __pyx_pf_3GPy_6models_18state_space_cython_17R_handling_Cython___init__(struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython *__pyx_v_self, PyArrayObject *__pyx_v_R, PyArrayObject *__pyx_v_index, int __pyx_v_R_time_var_index, int __pyx_v_p_unique_R_number, PyArrayObject *__pyx_v_dR); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_17R_handling_Cython_2Rk(struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython *__pyx_v_self, int __pyx_v_k); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_17R_handling_Cython_4dRk(struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython *__pyx_v_self, int __pyx_v_k); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_17R_handling_Cython_6R_isrk(struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython *__pyx_v_self, int __pyx_v_k); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_17R_handling_Cython_8__reduce_cython__(struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython *__pyx_v_self); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_17R_handling_Cython_10__setstate_cython__(struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython *__pyx_v_self, PyObject *__pyx_v___pyx_state); /* proto */
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static int __pyx_pf_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython___init__(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *__pyx_v_self, PyArrayObject *__pyx_v_H, int __pyx_v_H_time_var_index, PyArrayObject *__pyx_v_R, PyArrayObject *__pyx_v_index, int __pyx_v_R_time_var_index, int __pyx_v_unique_R_number, PyArrayObject *__pyx_v_dH, PyArrayObject *__pyx_v_dR); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_2f_h(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *__pyx_v_self, int __pyx_v_k, PyArrayObject *__pyx_v_m, PyArrayObject *__pyx_v_H); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_4Hk(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *__pyx_v_self, int __pyx_v_k, PyArrayObject *__pyx_v_m_pred, PyArrayObject *__pyx_v_P_pred); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_6dHk(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *__pyx_v_self, int __pyx_v_k); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_8__reduce_cython__(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *__pyx_v_self); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_10__setstate_cython__(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *__pyx_v_self, PyObject *__pyx_v___pyx_state); /* proto */
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static int __pyx_pf_3GPy_6models_18state_space_cython_17Q_handling_Cython___init__(struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython *__pyx_v_self, PyArrayObject *__pyx_v_Q, PyArrayObject *__pyx_v_index, int __pyx_v_Q_time_var_index, int __pyx_v_p_unique_Q_number, PyArrayObject *__pyx_v_dQ); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_17Q_handling_Cython_2Qk(struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython *__pyx_v_self, int __pyx_v_k); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_17Q_handling_Cython_4dQk(struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython *__pyx_v_self, int __pyx_v_k); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_17Q_handling_Cython_6Q_srk(struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython *__pyx_v_self, int __pyx_v_k); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_17Q_handling_Cython_8__reduce_cython__(struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython *__pyx_v_self); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_17Q_handling_Cython_10__setstate_cython__(struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython *__pyx_v_self, PyObject *__pyx_v___pyx_state); /* proto */
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static int __pyx_pf_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython___init__(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *__pyx_v_self, PyArrayObject *__pyx_v_A, int __pyx_v_A_time_var_index, PyArrayObject *__pyx_v_Q, PyArrayObject *__pyx_v_index, int __pyx_v_Q_time_var_index, int __pyx_v_unique_Q_number, PyArrayObject *__pyx_v_dA, PyArrayObject *__pyx_v_dQ); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_2f_a(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_k, PyArrayObject *__pyx_v_m, PyArrayObject *__pyx_v_A); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_4Ak(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_k, PyArrayObject *__pyx_v_m_pred, PyArrayObject *__pyx_v_P_pred); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_6dAk(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_k); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_8reset(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_compute_derivatives); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_10__reduce_cython__(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *__pyx_v_self); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_12__setstate_cython__(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *__pyx_v_self, PyObject *__pyx_v___pyx_state); /* proto */
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static int __pyx_pf_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython___init__(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, PyArrayObject *__pyx_v_As, PyArrayObject *__pyx_v_Qs, PyArrayObject *__pyx_v_reconstruct_indices, PyArrayObject *__pyx_v_dAs, PyArrayObject *__pyx_v_dQs); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_2f_a(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_v_k, PyArrayObject *__pyx_v_m, PyArrayObject *__pyx_v_A); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_4reset(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_v_compute_derivatives); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_6Ak(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_v_k, PyArrayObject *__pyx_v_m, PyArrayObject *__pyx_v_P); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_8Qk(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_v_k); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_10dAk(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_v_k); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_12dQk(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_v_k); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_14Q_srk(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_v_k); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_16Q_inverse(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_v_k, float __pyx_v_jitter); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_18__reduce_cython__(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_20__setstate_cython__(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, PyObject *__pyx_v___pyx_state); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython__kalman_prediction_step_SVD_Cython(CYTHON_UNUSED PyObject *__pyx_self, long __pyx_v_k, PyArrayObject *__pyx_v_p_m, PyObject *__pyx_v_p_P, struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_p_dynamic_callables, int __pyx_v_calc_grad_log_likelihood, PyArrayObject *__pyx_v_p_dm, PyArrayObject *__pyx_v_p_dP); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_2_kalman_update_step_SVD_Cython(CYTHON_UNUSED PyObject *__pyx_self, long __pyx_v_k, PyArrayObject *__pyx_v_p_m, PyObject *__pyx_v_p_P, struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_p_measurement_callables, PyArrayObject *__pyx_v_measurement, int __pyx_v_calc_log_likelihood, int __pyx_v_calc_grad_log_likelihood, PyArrayObject *__pyx_v_p_dm, PyArrayObject *__pyx_v_p_dP); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_4_cont_discr_kalman_filter_raw_Cython(CYTHON_UNUSED PyObject *__pyx_self, int __pyx_v_state_dim, struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_p_dynamic_callables, struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_p_measurement_callables, CYTHON_UNUSED PyObject *__pyx_v_X, PyObject *__pyx_v_Y, PyArrayObject *__pyx_v_m_init, PyArrayObject *__pyx_v_P_init, CYTHON_UNUSED PyObject *__pyx_v_p_kalman_filter_type, int __pyx_v_calc_log_likelihood, int __pyx_v_calc_grad_log_likelihood, int __pyx_v_grad_params_no, PyArrayObject *__pyx_v_dm_init, PyArrayObject *__pyx_v_dP_init); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_6__pyx_unpickle_Dynamic_Callables_Cython(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v___pyx_type, long __pyx_v___pyx_checksum, PyObject *__pyx_v___pyx_state); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_8__pyx_unpickle_Measurement_Callables_Cython(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v___pyx_type, long __pyx_v___pyx_checksum, PyObject *__pyx_v___pyx_state); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_10__pyx_unpickle_R_handling_Cython(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v___pyx_type, long __pyx_v___pyx_checksum, PyObject *__pyx_v___pyx_state); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_12__pyx_unpickle_Std_Measurement_Callables_Cython(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v___pyx_type, long __pyx_v___pyx_checksum, PyObject *__pyx_v___pyx_state); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_14__pyx_unpickle_Q_handling_Cython(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v___pyx_type, long __pyx_v___pyx_checksum, PyObject *__pyx_v___pyx_state); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_16__pyx_unpickle_Std_Dynamic_Callables_Cython(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v___pyx_type, long __pyx_v___pyx_checksum, PyObject *__pyx_v___pyx_state); /* proto */
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static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_18__pyx_unpickle_AQcompute_batch_Cython(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v___pyx_type, long __pyx_v___pyx_checksum, PyObject *__pyx_v___pyx_state); /* proto */
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static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/
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static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_Measurement_Callables_Cython(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/
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static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_R_handling_Cython(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/
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static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/
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static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_Q_handling_Cython(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/
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static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/
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static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_AQcompute_batch_Cython(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/
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static PyObject *__pyx_float_0_5;
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static PyObject *__pyx_float_1_0;
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static PyObject *__pyx_float_1eneg_17;
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static PyObject *__pyx_float_neg_0_5;
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static PyObject *__pyx_int_0;
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static PyObject *__pyx_int_1;
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static PyObject *__pyx_int_2;
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static PyObject *__pyx_int_21422583;
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static PyObject *__pyx_int_117883743;
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static PyObject *__pyx_int_125522784;
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static PyObject *__pyx_int_166296743;
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static PyObject *__pyx_int_222419149;
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static PyObject *__pyx_int_234819414;
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static PyObject *__pyx_tuple_;
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static char __pyx_doc_3GPy_6models_18state_space_cython_17R_handling_Cython___init__[] = "\n Input: \n ---------------\n R - array with noise on various steps. The result of preprocessing\n the noise input.\n \n index - for each step of Kalman filter contains the corresponding index\n in the array.\n \n R_time_var_index - another index in the array R. Computed earlier and passed here.\n \n unique_R_number - number of unique noise matrices below which square roots\n are cached and above which they are computed each time.\n \n dR: 3D array[:, :, param_num]\n derivative of R. Derivative is supported only when R do not change over time\n \n Output:\n --------------\n Object which has two necessary functions:\n f_R(k)\n inv_R_square_root(k)\n ";
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/* "GPy/models/state_space_cython.pyx":78
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* dict R_square_root
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*
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* def __init__(self, np.ndarray[DTYPE_t, ndim=3] R, np.ndarray[DTYPE_t, ndim=2] index, # <<<<<<<<<<<<<<
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/* "GPy/models/state_space_cython.pyx":399
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* int last_k
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*
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|
* np.ndarray[DTYPE_int_t, ndim=1] reconstruct_indices,
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* np.ndarray[DTYPE_t, ndim=4] dAs=None,
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*/
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/* function exit code */
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goto __pyx_L0;
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int __pyx_t_4;
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* bint calc_grad_log_likelihood=False,
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/* "GPy/models/state_space_cython.pyx":551
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*
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* @cython.boundscheck(False)
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* Measurement_Callables_Cython p_measurement_callables,
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*/
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/* Python wrapper */
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static char __pyx_doc_3GPy_6models_18state_space_cython_2_kalman_update_step_SVD_Cython[] = "\n Input:\n \n k: int\n Iteration No. Starts at 0. Total number of iterations equal to the \n number of measurements.\n \n m_P: matrix of size (state_dim, time_series_no)\n Mean value from the previous step. For \"multiple time series mode\" \n it is matrix, second dimension of which correspond to different\n time series.\n \n p_P: tuple (P_pred, S, V)\n Covariance matrix from the prediction step and its SVD decomposition.\n P_pred = V * S * V.T The tuple is (P_pred, S, V)\n \n p_h: function (k, x_{k}, H_{k}). Measurement function.\n k (iteration number), starts at 0\n x_{k} state \n H_{k} Jacobian matrices of f_h. In the linear case it is exactly H_{k}.\n \n p_f_H: function (k, m, P) return Jacobian of dynamic function, it is\n passed into p_h.\n k (iteration number), starts at 0\n m: point where Jacobian is evaluated\n P: parameter for Jacobian, usually covariance matrix.\n \n p_f_R: function (k). Returns noise matrix of measurement equation \n on iteration k.\n k (iteration number). starts at 0\n \n p_f_iRsr: function (k). Returns the square root of the noise matrix of \n measurement equation on iteration k. \n k (iteration number). starts at 0\n \n measurement: (measurement_dim, time_series_no) matrix\n One measurement used on the current update step. For \n \"multiple time series mode\" it is matrix, second dimension of \n which correspond to different time series.\n \n calc_log_likelihood: boolean\n Whether to calculate marginal likelihood of the state-space model.\n \n calc_grad_log_likelihood: boolean\n Whether to calculate gradient of the marginal likelihood \n of the state-space model. If true then the next parameter must \n provide the extra parameters for gradient cal""culation.\n \n p_dm: 3D array (state_dim, time_series_no, parameters_no)\n Mean derivatives from the prediction step. For \"multiple time series mode\" \n it is 3D array, second dimension of which correspond to different\n time series.\n \n p_dP: array\n Covariance derivatives from the prediction step.\n \n grad_calc_params_2: List or None\n List with derivatives. The first component is 'f_dH' - function(k)\n which returns the derivative of H. The second element is 'f_dR'\n - function(k). Function which returns the derivative of R.\n \n Output:\n ----------------------------\n m_upd, P_upd, dm_upd, dP_upd: metrices, 3D objects\n Results of the prediction steps.\n \n log_likelihood_update: double or 1D array\n Update to the log_likelihood from this step \n \n d_log_likelihood_update: (grad_params_no, time_series_no) matrix\n Update to the gradient of log_likelihood, \"multiple time series mode\"\n adds extra columns to the gradient.\n \n ";
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* Measurement_Callables_Cython p_measurement_callables,
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* np.ndarray[DTYPE_t, ndim=2] measurement,
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* np.ndarray[DTYPE_t, ndim=2] measurement,
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|
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/* "GPy/models/state_space_cython.pyx":686
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*
|
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* @cython.boundscheck(False)
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* def _kalman_update_step_SVD_Cython(long k, np.ndarray[DTYPE_t, ndim=2] p_m, tuple p_P, # <<<<<<<<<<<<<<
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* Measurement_Callables_Cython p_measurement_callables,
|
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* np.ndarray[DTYPE_t, ndim=2] measurement,
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*/
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PyArrayObject *__pyx_v_m_pred = 0;
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PyArrayObject *__pyx_v_P_pred = 0;
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PyArrayObject *__pyx_v_S_pred = 0;
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PyArrayObject *__pyx_v_V_pred = 0;
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PyArrayObject *__pyx_v_H = 0;
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PyArrayObject *__pyx_v_R = 0;
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PyArrayObject *__pyx_v_R_isr = 0;
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int __pyx_v_time_series_no;
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PyArrayObject *__pyx_v_log_likelihood_update = 0;
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PyArrayObject *__pyx_v_v = 0;
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PyArrayObject *__pyx_v_svd_2_matr = 0;
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PyObject *__pyx_v_res = NULL;
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CYTHON_UNUSED PyArrayObject *__pyx_v_U = 0;
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PyArrayObject *__pyx_v_S_svd = 0;
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PyArrayObject *__pyx_v_Vh = 0;
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PyArrayObject *__pyx_v_U_upd = 0;
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PyArrayObject *__pyx_v_S_upd = 0;
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PyArrayObject *__pyx_v_P_upd = 0;
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PyArrayObject *__pyx_v_S = 0;
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PyArrayObject *__pyx_v_K = 0;
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CYTHON_UNUSED int __pyx_v_measurement_dim_gt_one;
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PyArrayObject *__pyx_v_dm_upd = 0;
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PyArrayObject *__pyx_v_dP_upd = 0;
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PyArrayObject *__pyx_v_d_log_likelihood_update = 0;
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PyArrayObject *__pyx_v_dm_pred_all_params = 0;
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PyArrayObject *__pyx_v_dP_pred_all_params = 0;
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int __pyx_v_param_number;
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PyArrayObject *__pyx_v_dH_all_params = 0;
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PyArrayObject *__pyx_v_dR_all_params = 0;
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int __pyx_v_param;
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PyArrayObject *__pyx_v_dP_pred = 0;
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* return __pyx_result
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static PyObject *__pyx_f_3GPy_6models_18state_space_cython___pyx_unpickle_Std_Dynamic_Callables_Cython__set_state(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *__pyx_v___pyx_result, PyObject *__pyx_v___pyx_state) {
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/* "(tree fragment)":13
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* cdef __pyx_unpickle_Std_Dynamic_Callables_Cython__set_state(Std_Dynamic_Callables_Cython __pyx_result, tuple __pyx_state):
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* if len(__pyx_state) > 9 and hasattr(__pyx_result, '__dict__'): # <<<<<<<<<<<<<<
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/* "../../.pyenv/versions/gpy391/lib/python3.9/site-packages/numpy/__init__.pxd":999
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static CYTHON_INLINE npy_timedelta __pyx_f_5numpy_get_timedelta64_value(PyObject *__pyx_v_obj) {
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npy_timedelta __pyx_r;
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|
|
* cdef inline npy_timedelta get_timedelta64_value(object obj) nogil: # <<<<<<<<<<<<<<
|
|
* """
|
|
* returns the int64 value underlying scalar numpy timedelta64 object
|
|
*/
|
|
|
|
/* function exit code */
|
|
__pyx_L0:;
|
|
return __pyx_r;
|
|
}
|
|
|
|
/* "../../.pyenv/versions/gpy391/lib/python3.9/site-packages/numpy/__init__.pxd":1016
|
|
*
|
|
*
|
|
* cdef inline NPY_DATETIMEUNIT get_datetime64_unit(object obj) nogil: # <<<<<<<<<<<<<<
|
|
* """
|
|
* returns the unit part of the dtype for a numpy datetime64 object.
|
|
*/
|
|
|
|
static CYTHON_INLINE NPY_DATETIMEUNIT __pyx_f_5numpy_get_datetime64_unit(PyObject *__pyx_v_obj) {
|
|
NPY_DATETIMEUNIT __pyx_r;
|
|
|
|
/* "../../.pyenv/versions/gpy391/lib/python3.9/site-packages/numpy/__init__.pxd":1020
|
|
* returns the unit part of the dtype for a numpy datetime64 object.
|
|
* """
|
|
* return <NPY_DATETIMEUNIT>(<PyDatetimeScalarObject*>obj).obmeta.base # <<<<<<<<<<<<<<
|
|
*/
|
|
__pyx_r = ((NPY_DATETIMEUNIT)((PyDatetimeScalarObject *)__pyx_v_obj)->obmeta.base);
|
|
goto __pyx_L0;
|
|
|
|
/* "../../.pyenv/versions/gpy391/lib/python3.9/site-packages/numpy/__init__.pxd":1016
|
|
*
|
|
*
|
|
* cdef inline NPY_DATETIMEUNIT get_datetime64_unit(object obj) nogil: # <<<<<<<<<<<<<<
|
|
* """
|
|
* returns the unit part of the dtype for a numpy datetime64 object.
|
|
*/
|
|
|
|
/* function exit code */
|
|
__pyx_L0:;
|
|
return __pyx_r;
|
|
}
|
|
static struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython __pyx_vtable_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython;
|
|
|
|
static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython(PyTypeObject *t, CYTHON_UNUSED PyObject *a, CYTHON_UNUSED PyObject *k) {
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *p;
|
|
PyObject *o;
|
|
if (likely((t->tp_flags & Py_TPFLAGS_IS_ABSTRACT) == 0)) {
|
|
o = (*t->tp_alloc)(t, 0);
|
|
} else {
|
|
o = (PyObject *) PyBaseObject_Type.tp_new(t, __pyx_empty_tuple, 0);
|
|
}
|
|
if (unlikely(!o)) return 0;
|
|
p = ((struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *)o);
|
|
p->__pyx_vtab = __pyx_vtabptr_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython;
|
|
return o;
|
|
}
|
|
|
|
static void __pyx_tp_dealloc_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython(PyObject *o) {
|
|
#if CYTHON_USE_TP_FINALIZE
|
|
if (unlikely(PyType_HasFeature(Py_TYPE(o), Py_TPFLAGS_HAVE_FINALIZE) && Py_TYPE(o)->tp_finalize) && (!PyType_IS_GC(Py_TYPE(o)) || !_PyGC_FINALIZED(o))) {
|
|
if (PyObject_CallFinalizerFromDealloc(o)) return;
|
|
}
|
|
#endif
|
|
(*Py_TYPE(o)->tp_free)(o);
|
|
}
|
|
|
|
static PyMethodDef __pyx_methods_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython[] = {
|
|
{"f_a", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_1f_a, METH_VARARGS|METH_KEYWORDS, 0},
|
|
{"Ak", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_3Ak, METH_VARARGS|METH_KEYWORDS, 0},
|
|
{"Qk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_5Qk, METH_O, 0},
|
|
{"Q_srk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_7Q_srk, METH_O, 0},
|
|
{"dAk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_9dAk, METH_O, 0},
|
|
{"dQk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_11dQk, METH_O, 0},
|
|
{"reset", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_13reset, METH_VARARGS|METH_KEYWORDS, 0},
|
|
{"__reduce_cython__", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_15__reduce_cython__, METH_NOARGS, 0},
|
|
{"__setstate_cython__", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_17__setstate_cython__, METH_O, 0},
|
|
{0, 0, 0, 0}
|
|
};
|
|
|
|
static PyTypeObject __pyx_type_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython = {
|
|
PyVarObject_HEAD_INIT(0, 0)
|
|
"GPy.models.state_space_cython.Dynamic_Callables_Cython", /*tp_name*/
|
|
sizeof(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython), /*tp_basicsize*/
|
|
0, /*tp_itemsize*/
|
|
__pyx_tp_dealloc_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython, /*tp_dealloc*/
|
|
#if PY_VERSION_HEX < 0x030800b4
|
|
0, /*tp_print*/
|
|
#endif
|
|
#if PY_VERSION_HEX >= 0x030800b4
|
|
0, /*tp_vectorcall_offset*/
|
|
#endif
|
|
0, /*tp_getattr*/
|
|
0, /*tp_setattr*/
|
|
#if PY_MAJOR_VERSION < 3
|
|
0, /*tp_compare*/
|
|
#endif
|
|
#if PY_MAJOR_VERSION >= 3
|
|
0, /*tp_as_async*/
|
|
#endif
|
|
0, /*tp_repr*/
|
|
0, /*tp_as_number*/
|
|
0, /*tp_as_sequence*/
|
|
0, /*tp_as_mapping*/
|
|
0, /*tp_hash*/
|
|
0, /*tp_call*/
|
|
0, /*tp_str*/
|
|
0, /*tp_getattro*/
|
|
0, /*tp_setattro*/
|
|
0, /*tp_as_buffer*/
|
|
Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE, /*tp_flags*/
|
|
0, /*tp_doc*/
|
|
0, /*tp_traverse*/
|
|
0, /*tp_clear*/
|
|
0, /*tp_richcompare*/
|
|
0, /*tp_weaklistoffset*/
|
|
0, /*tp_iter*/
|
|
0, /*tp_iternext*/
|
|
__pyx_methods_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython, /*tp_methods*/
|
|
0, /*tp_members*/
|
|
0, /*tp_getset*/
|
|
0, /*tp_base*/
|
|
0, /*tp_dict*/
|
|
0, /*tp_descr_get*/
|
|
0, /*tp_descr_set*/
|
|
0, /*tp_dictoffset*/
|
|
0, /*tp_init*/
|
|
0, /*tp_alloc*/
|
|
__pyx_tp_new_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython, /*tp_new*/
|
|
0, /*tp_free*/
|
|
0, /*tp_is_gc*/
|
|
0, /*tp_bases*/
|
|
0, /*tp_mro*/
|
|
0, /*tp_cache*/
|
|
0, /*tp_subclasses*/
|
|
0, /*tp_weaklist*/
|
|
0, /*tp_del*/
|
|
0, /*tp_version_tag*/
|
|
#if PY_VERSION_HEX >= 0x030400a1
|
|
0, /*tp_finalize*/
|
|
#endif
|
|
#if PY_VERSION_HEX >= 0x030800b1
|
|
0, /*tp_vectorcall*/
|
|
#endif
|
|
#if PY_VERSION_HEX >= 0x030800b4 && PY_VERSION_HEX < 0x03090000
|
|
0, /*tp_print*/
|
|
#endif
|
|
};
|
|
static struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_Measurement_Callables_Cython __pyx_vtable_3GPy_6models_18state_space_cython_Measurement_Callables_Cython;
|
|
|
|
static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_Measurement_Callables_Cython(PyTypeObject *t, CYTHON_UNUSED PyObject *a, CYTHON_UNUSED PyObject *k) {
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *p;
|
|
PyObject *o;
|
|
if (likely((t->tp_flags & Py_TPFLAGS_IS_ABSTRACT) == 0)) {
|
|
o = (*t->tp_alloc)(t, 0);
|
|
} else {
|
|
o = (PyObject *) PyBaseObject_Type.tp_new(t, __pyx_empty_tuple, 0);
|
|
}
|
|
if (unlikely(!o)) return 0;
|
|
p = ((struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *)o);
|
|
p->__pyx_vtab = __pyx_vtabptr_3GPy_6models_18state_space_cython_Measurement_Callables_Cython;
|
|
return o;
|
|
}
|
|
|
|
static void __pyx_tp_dealloc_3GPy_6models_18state_space_cython_Measurement_Callables_Cython(PyObject *o) {
|
|
#if CYTHON_USE_TP_FINALIZE
|
|
if (unlikely(PyType_HasFeature(Py_TYPE(o), Py_TPFLAGS_HAVE_FINALIZE) && Py_TYPE(o)->tp_finalize) && (!PyType_IS_GC(Py_TYPE(o)) || !_PyGC_FINALIZED(o))) {
|
|
if (PyObject_CallFinalizerFromDealloc(o)) return;
|
|
}
|
|
#endif
|
|
(*Py_TYPE(o)->tp_free)(o);
|
|
}
|
|
|
|
static PyMethodDef __pyx_methods_3GPy_6models_18state_space_cython_Measurement_Callables_Cython[] = {
|
|
{"f_h", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_1f_h, METH_VARARGS|METH_KEYWORDS, 0},
|
|
{"Hk", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_3Hk, METH_VARARGS|METH_KEYWORDS, 0},
|
|
{"Rk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_5Rk, METH_O, 0},
|
|
{"R_isrk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_7R_isrk, METH_O, 0},
|
|
{"dHk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_9dHk, METH_O, 0},
|
|
{"dRk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_11dRk, METH_O, 0},
|
|
{"reset", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_13reset, METH_VARARGS|METH_KEYWORDS, 0},
|
|
{"__reduce_cython__", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_15__reduce_cython__, METH_NOARGS, 0},
|
|
{"__setstate_cython__", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_17__setstate_cython__, METH_O, 0},
|
|
{0, 0, 0, 0}
|
|
};
|
|
|
|
static PyTypeObject __pyx_type_3GPy_6models_18state_space_cython_Measurement_Callables_Cython = {
|
|
PyVarObject_HEAD_INIT(0, 0)
|
|
"GPy.models.state_space_cython.Measurement_Callables_Cython", /*tp_name*/
|
|
sizeof(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython), /*tp_basicsize*/
|
|
0, /*tp_itemsize*/
|
|
__pyx_tp_dealloc_3GPy_6models_18state_space_cython_Measurement_Callables_Cython, /*tp_dealloc*/
|
|
#if PY_VERSION_HEX < 0x030800b4
|
|
0, /*tp_print*/
|
|
#endif
|
|
#if PY_VERSION_HEX >= 0x030800b4
|
|
0, /*tp_vectorcall_offset*/
|
|
#endif
|
|
0, /*tp_getattr*/
|
|
0, /*tp_setattr*/
|
|
#if PY_MAJOR_VERSION < 3
|
|
0, /*tp_compare*/
|
|
#endif
|
|
#if PY_MAJOR_VERSION >= 3
|
|
0, /*tp_as_async*/
|
|
#endif
|
|
0, /*tp_repr*/
|
|
0, /*tp_as_number*/
|
|
0, /*tp_as_sequence*/
|
|
0, /*tp_as_mapping*/
|
|
0, /*tp_hash*/
|
|
0, /*tp_call*/
|
|
0, /*tp_str*/
|
|
0, /*tp_getattro*/
|
|
0, /*tp_setattro*/
|
|
0, /*tp_as_buffer*/
|
|
Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE, /*tp_flags*/
|
|
0, /*tp_doc*/
|
|
0, /*tp_traverse*/
|
|
0, /*tp_clear*/
|
|
0, /*tp_richcompare*/
|
|
0, /*tp_weaklistoffset*/
|
|
0, /*tp_iter*/
|
|
0, /*tp_iternext*/
|
|
__pyx_methods_3GPy_6models_18state_space_cython_Measurement_Callables_Cython, /*tp_methods*/
|
|
0, /*tp_members*/
|
|
0, /*tp_getset*/
|
|
0, /*tp_base*/
|
|
0, /*tp_dict*/
|
|
0, /*tp_descr_get*/
|
|
0, /*tp_descr_set*/
|
|
0, /*tp_dictoffset*/
|
|
0, /*tp_init*/
|
|
0, /*tp_alloc*/
|
|
__pyx_tp_new_3GPy_6models_18state_space_cython_Measurement_Callables_Cython, /*tp_new*/
|
|
0, /*tp_free*/
|
|
0, /*tp_is_gc*/
|
|
0, /*tp_bases*/
|
|
0, /*tp_mro*/
|
|
0, /*tp_cache*/
|
|
0, /*tp_subclasses*/
|
|
0, /*tp_weaklist*/
|
|
0, /*tp_del*/
|
|
0, /*tp_version_tag*/
|
|
#if PY_VERSION_HEX >= 0x030400a1
|
|
0, /*tp_finalize*/
|
|
#endif
|
|
#if PY_VERSION_HEX >= 0x030800b1
|
|
0, /*tp_vectorcall*/
|
|
#endif
|
|
#if PY_VERSION_HEX >= 0x030800b4 && PY_VERSION_HEX < 0x03090000
|
|
0, /*tp_print*/
|
|
#endif
|
|
};
|
|
static struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_R_handling_Cython __pyx_vtable_3GPy_6models_18state_space_cython_R_handling_Cython;
|
|
|
|
static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_R_handling_Cython(PyTypeObject *t, PyObject *a, PyObject *k) {
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython *p;
|
|
PyObject *o = __pyx_tp_new_3GPy_6models_18state_space_cython_Measurement_Callables_Cython(t, a, k);
|
|
if (unlikely(!o)) return 0;
|
|
p = ((struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython *)o);
|
|
p->__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_Measurement_Callables_Cython*)__pyx_vtabptr_3GPy_6models_18state_space_cython_R_handling_Cython;
|
|
p->R = ((PyArrayObject *)Py_None); Py_INCREF(Py_None);
|
|
p->index = ((PyArrayObject *)Py_None); Py_INCREF(Py_None);
|
|
p->dR = ((PyArrayObject *)Py_None); Py_INCREF(Py_None);
|
|
p->R_square_root = ((PyObject*)Py_None); Py_INCREF(Py_None);
|
|
return o;
|
|
}
|
|
|
|
static void __pyx_tp_dealloc_3GPy_6models_18state_space_cython_R_handling_Cython(PyObject *o) {
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython *p = (struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython *)o;
|
|
#if CYTHON_USE_TP_FINALIZE
|
|
if (unlikely(PyType_HasFeature(Py_TYPE(o), Py_TPFLAGS_HAVE_FINALIZE) && Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) {
|
|
if (PyObject_CallFinalizerFromDealloc(o)) return;
|
|
}
|
|
#endif
|
|
PyObject_GC_UnTrack(o);
|
|
Py_CLEAR(p->R);
|
|
Py_CLEAR(p->index);
|
|
Py_CLEAR(p->dR);
|
|
Py_CLEAR(p->R_square_root);
|
|
#if CYTHON_USE_TYPE_SLOTS
|
|
if (PyType_IS_GC(Py_TYPE(o)->tp_base))
|
|
#endif
|
|
PyObject_GC_Track(o);
|
|
__pyx_tp_dealloc_3GPy_6models_18state_space_cython_Measurement_Callables_Cython(o);
|
|
}
|
|
|
|
static int __pyx_tp_traverse_3GPy_6models_18state_space_cython_R_handling_Cython(PyObject *o, visitproc v, void *a) {
|
|
int e;
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython *p = (struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython *)o;
|
|
e = ((likely(__pyx_ptype_3GPy_6models_18state_space_cython_Measurement_Callables_Cython)) ? ((__pyx_ptype_3GPy_6models_18state_space_cython_Measurement_Callables_Cython->tp_traverse) ? __pyx_ptype_3GPy_6models_18state_space_cython_Measurement_Callables_Cython->tp_traverse(o, v, a) : 0) : __Pyx_call_next_tp_traverse(o, v, a, __pyx_tp_traverse_3GPy_6models_18state_space_cython_R_handling_Cython)); if (e) return e;
|
|
if (p->R) {
|
|
e = (*v)(((PyObject *)p->R), a); if (e) return e;
|
|
}
|
|
if (p->index) {
|
|
e = (*v)(((PyObject *)p->index), a); if (e) return e;
|
|
}
|
|
if (p->dR) {
|
|
e = (*v)(((PyObject *)p->dR), a); if (e) return e;
|
|
}
|
|
if (p->R_square_root) {
|
|
e = (*v)(p->R_square_root, a); if (e) return e;
|
|
}
|
|
return 0;
|
|
}
|
|
|
|
static int __pyx_tp_clear_3GPy_6models_18state_space_cython_R_handling_Cython(PyObject *o) {
|
|
PyObject* tmp;
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython *p = (struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython *)o;
|
|
if (likely(__pyx_ptype_3GPy_6models_18state_space_cython_Measurement_Callables_Cython)) { if (__pyx_ptype_3GPy_6models_18state_space_cython_Measurement_Callables_Cython->tp_clear) __pyx_ptype_3GPy_6models_18state_space_cython_Measurement_Callables_Cython->tp_clear(o); } else __Pyx_call_next_tp_clear(o, __pyx_tp_clear_3GPy_6models_18state_space_cython_R_handling_Cython);
|
|
tmp = ((PyObject*)p->R);
|
|
p->R = ((PyArrayObject *)Py_None); Py_INCREF(Py_None);
|
|
Py_XDECREF(tmp);
|
|
tmp = ((PyObject*)p->index);
|
|
p->index = ((PyArrayObject *)Py_None); Py_INCREF(Py_None);
|
|
Py_XDECREF(tmp);
|
|
tmp = ((PyObject*)p->dR);
|
|
p->dR = ((PyArrayObject *)Py_None); Py_INCREF(Py_None);
|
|
Py_XDECREF(tmp);
|
|
tmp = ((PyObject*)p->R_square_root);
|
|
p->R_square_root = ((PyObject*)Py_None); Py_INCREF(Py_None);
|
|
Py_XDECREF(tmp);
|
|
return 0;
|
|
}
|
|
|
|
static PyMethodDef __pyx_methods_3GPy_6models_18state_space_cython_R_handling_Cython[] = {
|
|
{"Rk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_17R_handling_Cython_3Rk, METH_O, 0},
|
|
{"dRk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_17R_handling_Cython_5dRk, METH_O, 0},
|
|
{"R_isrk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_17R_handling_Cython_7R_isrk, METH_O, __pyx_doc_3GPy_6models_18state_space_cython_17R_handling_Cython_6R_isrk},
|
|
{"__reduce_cython__", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_17R_handling_Cython_9__reduce_cython__, METH_NOARGS, 0},
|
|
{"__setstate_cython__", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_17R_handling_Cython_11__setstate_cython__, METH_O, 0},
|
|
{0, 0, 0, 0}
|
|
};
|
|
|
|
static PyTypeObject __pyx_type_3GPy_6models_18state_space_cython_R_handling_Cython = {
|
|
PyVarObject_HEAD_INIT(0, 0)
|
|
"GPy.models.state_space_cython.R_handling_Cython", /*tp_name*/
|
|
sizeof(struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython), /*tp_basicsize*/
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|
0, /*tp_itemsize*/
|
|
__pyx_tp_dealloc_3GPy_6models_18state_space_cython_R_handling_Cython, /*tp_dealloc*/
|
|
#if PY_VERSION_HEX < 0x030800b4
|
|
0, /*tp_print*/
|
|
#endif
|
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#if PY_VERSION_HEX >= 0x030800b4
|
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0, /*tp_vectorcall_offset*/
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#endif
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0, /*tp_getattr*/
|
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0, /*tp_setattr*/
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|
#if PY_MAJOR_VERSION < 3
|
|
0, /*tp_compare*/
|
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#endif
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|
#if PY_MAJOR_VERSION >= 3
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0, /*tp_as_async*/
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#endif
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0, /*tp_repr*/
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|
0, /*tp_as_number*/
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0, /*tp_as_sequence*/
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0, /*tp_as_mapping*/
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0, /*tp_hash*/
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|
0, /*tp_call*/
|
|
0, /*tp_str*/
|
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0, /*tp_getattro*/
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|
0, /*tp_setattro*/
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0, /*tp_as_buffer*/
|
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Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/
|
|
"\n The calss handles noise matrix R.\n ", /*tp_doc*/
|
|
__pyx_tp_traverse_3GPy_6models_18state_space_cython_R_handling_Cython, /*tp_traverse*/
|
|
__pyx_tp_clear_3GPy_6models_18state_space_cython_R_handling_Cython, /*tp_clear*/
|
|
0, /*tp_richcompare*/
|
|
0, /*tp_weaklistoffset*/
|
|
0, /*tp_iter*/
|
|
0, /*tp_iternext*/
|
|
__pyx_methods_3GPy_6models_18state_space_cython_R_handling_Cython, /*tp_methods*/
|
|
0, /*tp_members*/
|
|
0, /*tp_getset*/
|
|
0, /*tp_base*/
|
|
0, /*tp_dict*/
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|
0, /*tp_descr_get*/
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|
0, /*tp_descr_set*/
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|
0, /*tp_dictoffset*/
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__pyx_pw_3GPy_6models_18state_space_cython_17R_handling_Cython_1__init__, /*tp_init*/
|
|
0, /*tp_alloc*/
|
|
__pyx_tp_new_3GPy_6models_18state_space_cython_R_handling_Cython, /*tp_new*/
|
|
0, /*tp_free*/
|
|
0, /*tp_is_gc*/
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|
0, /*tp_bases*/
|
|
0, /*tp_mro*/
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0, /*tp_cache*/
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0, /*tp_subclasses*/
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0, /*tp_weaklist*/
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0, /*tp_del*/
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|
0, /*tp_version_tag*/
|
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#if PY_VERSION_HEX >= 0x030400a1
|
|
0, /*tp_finalize*/
|
|
#endif
|
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#if PY_VERSION_HEX >= 0x030800b1
|
|
0, /*tp_vectorcall*/
|
|
#endif
|
|
#if PY_VERSION_HEX >= 0x030800b4 && PY_VERSION_HEX < 0x03090000
|
|
0, /*tp_print*/
|
|
#endif
|
|
};
|
|
static struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython __pyx_vtable_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython;
|
|
|
|
static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython(PyTypeObject *t, PyObject *a, PyObject *k) {
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *p;
|
|
PyObject *o = __pyx_tp_new_3GPy_6models_18state_space_cython_R_handling_Cython(t, a, k);
|
|
if (unlikely(!o)) return 0;
|
|
p = ((struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *)o);
|
|
p->__pyx_base.__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_Measurement_Callables_Cython*)__pyx_vtabptr_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython;
|
|
p->H = ((PyArrayObject *)Py_None); Py_INCREF(Py_None);
|
|
p->dH = ((PyArrayObject *)Py_None); Py_INCREF(Py_None);
|
|
return o;
|
|
}
|
|
|
|
static void __pyx_tp_dealloc_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython(PyObject *o) {
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *p = (struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *)o;
|
|
#if CYTHON_USE_TP_FINALIZE
|
|
if (unlikely(PyType_HasFeature(Py_TYPE(o), Py_TPFLAGS_HAVE_FINALIZE) && Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) {
|
|
if (PyObject_CallFinalizerFromDealloc(o)) return;
|
|
}
|
|
#endif
|
|
PyObject_GC_UnTrack(o);
|
|
Py_CLEAR(p->H);
|
|
Py_CLEAR(p->dH);
|
|
PyObject_GC_Track(o);
|
|
__pyx_tp_dealloc_3GPy_6models_18state_space_cython_R_handling_Cython(o);
|
|
}
|
|
|
|
static int __pyx_tp_traverse_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython(PyObject *o, visitproc v, void *a) {
|
|
int e;
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *p = (struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *)o;
|
|
e = __pyx_tp_traverse_3GPy_6models_18state_space_cython_R_handling_Cython(o, v, a); if (e) return e;
|
|
if (p->H) {
|
|
e = (*v)(((PyObject *)p->H), a); if (e) return e;
|
|
}
|
|
if (p->dH) {
|
|
e = (*v)(((PyObject *)p->dH), a); if (e) return e;
|
|
}
|
|
return 0;
|
|
}
|
|
|
|
static int __pyx_tp_clear_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython(PyObject *o) {
|
|
PyObject* tmp;
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *p = (struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *)o;
|
|
__pyx_tp_clear_3GPy_6models_18state_space_cython_R_handling_Cython(o);
|
|
tmp = ((PyObject*)p->H);
|
|
p->H = ((PyArrayObject *)Py_None); Py_INCREF(Py_None);
|
|
Py_XDECREF(tmp);
|
|
tmp = ((PyObject*)p->dH);
|
|
p->dH = ((PyArrayObject *)Py_None); Py_INCREF(Py_None);
|
|
Py_XDECREF(tmp);
|
|
return 0;
|
|
}
|
|
|
|
static PyMethodDef __pyx_methods_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython[] = {
|
|
{"f_h", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_3f_h, METH_VARARGS|METH_KEYWORDS, __pyx_doc_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_2f_h},
|
|
{"Hk", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_5Hk, METH_VARARGS|METH_KEYWORDS, __pyx_doc_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_4Hk},
|
|
{"dHk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_7dHk, METH_O, 0},
|
|
{"__reduce_cython__", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_9__reduce_cython__, METH_NOARGS, 0},
|
|
{"__setstate_cython__", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_11__setstate_cython__, METH_O, 0},
|
|
{0, 0, 0, 0}
|
|
};
|
|
|
|
static PyTypeObject __pyx_type_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython = {
|
|
PyVarObject_HEAD_INIT(0, 0)
|
|
"GPy.models.state_space_cython.Std_Measurement_Callables_Cython", /*tp_name*/
|
|
sizeof(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython), /*tp_basicsize*/
|
|
0, /*tp_itemsize*/
|
|
__pyx_tp_dealloc_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython, /*tp_dealloc*/
|
|
#if PY_VERSION_HEX < 0x030800b4
|
|
0, /*tp_print*/
|
|
#endif
|
|
#if PY_VERSION_HEX >= 0x030800b4
|
|
0, /*tp_vectorcall_offset*/
|
|
#endif
|
|
0, /*tp_getattr*/
|
|
0, /*tp_setattr*/
|
|
#if PY_MAJOR_VERSION < 3
|
|
0, /*tp_compare*/
|
|
#endif
|
|
#if PY_MAJOR_VERSION >= 3
|
|
0, /*tp_as_async*/
|
|
#endif
|
|
0, /*tp_repr*/
|
|
0, /*tp_as_number*/
|
|
0, /*tp_as_sequence*/
|
|
0, /*tp_as_mapping*/
|
|
0, /*tp_hash*/
|
|
0, /*tp_call*/
|
|
0, /*tp_str*/
|
|
0, /*tp_getattro*/
|
|
0, /*tp_setattro*/
|
|
0, /*tp_as_buffer*/
|
|
Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/
|
|
0, /*tp_doc*/
|
|
__pyx_tp_traverse_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython, /*tp_traverse*/
|
|
__pyx_tp_clear_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython, /*tp_clear*/
|
|
0, /*tp_richcompare*/
|
|
0, /*tp_weaklistoffset*/
|
|
0, /*tp_iter*/
|
|
0, /*tp_iternext*/
|
|
__pyx_methods_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython, /*tp_methods*/
|
|
0, /*tp_members*/
|
|
0, /*tp_getset*/
|
|
0, /*tp_base*/
|
|
0, /*tp_dict*/
|
|
0, /*tp_descr_get*/
|
|
0, /*tp_descr_set*/
|
|
0, /*tp_dictoffset*/
|
|
__pyx_pw_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_1__init__, /*tp_init*/
|
|
0, /*tp_alloc*/
|
|
__pyx_tp_new_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython, /*tp_new*/
|
|
0, /*tp_free*/
|
|
0, /*tp_is_gc*/
|
|
0, /*tp_bases*/
|
|
0, /*tp_mro*/
|
|
0, /*tp_cache*/
|
|
0, /*tp_subclasses*/
|
|
0, /*tp_weaklist*/
|
|
0, /*tp_del*/
|
|
0, /*tp_version_tag*/
|
|
#if PY_VERSION_HEX >= 0x030400a1
|
|
0, /*tp_finalize*/
|
|
#endif
|
|
#if PY_VERSION_HEX >= 0x030800b1
|
|
0, /*tp_vectorcall*/
|
|
#endif
|
|
#if PY_VERSION_HEX >= 0x030800b4 && PY_VERSION_HEX < 0x03090000
|
|
0, /*tp_print*/
|
|
#endif
|
|
};
|
|
static struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_Q_handling_Cython __pyx_vtable_3GPy_6models_18state_space_cython_Q_handling_Cython;
|
|
|
|
static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_Q_handling_Cython(PyTypeObject *t, PyObject *a, PyObject *k) {
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython *p;
|
|
PyObject *o = __pyx_tp_new_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython(t, a, k);
|
|
if (unlikely(!o)) return 0;
|
|
p = ((struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython *)o);
|
|
p->__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython*)__pyx_vtabptr_3GPy_6models_18state_space_cython_Q_handling_Cython;
|
|
p->Q = ((PyArrayObject *)Py_None); Py_INCREF(Py_None);
|
|
p->index = ((PyArrayObject *)Py_None); Py_INCREF(Py_None);
|
|
p->dQ = ((PyArrayObject *)Py_None); Py_INCREF(Py_None);
|
|
p->Q_square_root = ((PyObject*)Py_None); Py_INCREF(Py_None);
|
|
return o;
|
|
}
|
|
|
|
static void __pyx_tp_dealloc_3GPy_6models_18state_space_cython_Q_handling_Cython(PyObject *o) {
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython *p = (struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython *)o;
|
|
#if CYTHON_USE_TP_FINALIZE
|
|
if (unlikely(PyType_HasFeature(Py_TYPE(o), Py_TPFLAGS_HAVE_FINALIZE) && Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) {
|
|
if (PyObject_CallFinalizerFromDealloc(o)) return;
|
|
}
|
|
#endif
|
|
PyObject_GC_UnTrack(o);
|
|
Py_CLEAR(p->Q);
|
|
Py_CLEAR(p->index);
|
|
Py_CLEAR(p->dQ);
|
|
Py_CLEAR(p->Q_square_root);
|
|
#if CYTHON_USE_TYPE_SLOTS
|
|
if (PyType_IS_GC(Py_TYPE(o)->tp_base))
|
|
#endif
|
|
PyObject_GC_Track(o);
|
|
__pyx_tp_dealloc_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython(o);
|
|
}
|
|
|
|
static int __pyx_tp_traverse_3GPy_6models_18state_space_cython_Q_handling_Cython(PyObject *o, visitproc v, void *a) {
|
|
int e;
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython *p = (struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython *)o;
|
|
e = ((likely(__pyx_ptype_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython)) ? ((__pyx_ptype_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython->tp_traverse) ? __pyx_ptype_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython->tp_traverse(o, v, a) : 0) : __Pyx_call_next_tp_traverse(o, v, a, __pyx_tp_traverse_3GPy_6models_18state_space_cython_Q_handling_Cython)); if (e) return e;
|
|
if (p->Q) {
|
|
e = (*v)(((PyObject *)p->Q), a); if (e) return e;
|
|
}
|
|
if (p->index) {
|
|
e = (*v)(((PyObject *)p->index), a); if (e) return e;
|
|
}
|
|
if (p->dQ) {
|
|
e = (*v)(((PyObject *)p->dQ), a); if (e) return e;
|
|
}
|
|
if (p->Q_square_root) {
|
|
e = (*v)(p->Q_square_root, a); if (e) return e;
|
|
}
|
|
return 0;
|
|
}
|
|
|
|
static int __pyx_tp_clear_3GPy_6models_18state_space_cython_Q_handling_Cython(PyObject *o) {
|
|
PyObject* tmp;
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython *p = (struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython *)o;
|
|
if (likely(__pyx_ptype_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython)) { if (__pyx_ptype_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython->tp_clear) __pyx_ptype_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython->tp_clear(o); } else __Pyx_call_next_tp_clear(o, __pyx_tp_clear_3GPy_6models_18state_space_cython_Q_handling_Cython);
|
|
tmp = ((PyObject*)p->Q);
|
|
p->Q = ((PyArrayObject *)Py_None); Py_INCREF(Py_None);
|
|
Py_XDECREF(tmp);
|
|
tmp = ((PyObject*)p->index);
|
|
p->index = ((PyArrayObject *)Py_None); Py_INCREF(Py_None);
|
|
Py_XDECREF(tmp);
|
|
tmp = ((PyObject*)p->dQ);
|
|
p->dQ = ((PyArrayObject *)Py_None); Py_INCREF(Py_None);
|
|
Py_XDECREF(tmp);
|
|
tmp = ((PyObject*)p->Q_square_root);
|
|
p->Q_square_root = ((PyObject*)Py_None); Py_INCREF(Py_None);
|
|
Py_XDECREF(tmp);
|
|
return 0;
|
|
}
|
|
|
|
static PyMethodDef __pyx_methods_3GPy_6models_18state_space_cython_Q_handling_Cython[] = {
|
|
{"Qk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_17Q_handling_Cython_3Qk, METH_O, __pyx_doc_3GPy_6models_18state_space_cython_17Q_handling_Cython_2Qk},
|
|
{"dQk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_17Q_handling_Cython_5dQk, METH_O, 0},
|
|
{"Q_srk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_17Q_handling_Cython_7Q_srk, METH_O, __pyx_doc_3GPy_6models_18state_space_cython_17Q_handling_Cython_6Q_srk},
|
|
{"__reduce_cython__", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_17Q_handling_Cython_9__reduce_cython__, METH_NOARGS, 0},
|
|
{"__setstate_cython__", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_17Q_handling_Cython_11__setstate_cython__, METH_O, 0},
|
|
{0, 0, 0, 0}
|
|
};
|
|
|
|
static PyTypeObject __pyx_type_3GPy_6models_18state_space_cython_Q_handling_Cython = {
|
|
PyVarObject_HEAD_INIT(0, 0)
|
|
"GPy.models.state_space_cython.Q_handling_Cython", /*tp_name*/
|
|
sizeof(struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython), /*tp_basicsize*/
|
|
0, /*tp_itemsize*/
|
|
__pyx_tp_dealloc_3GPy_6models_18state_space_cython_Q_handling_Cython, /*tp_dealloc*/
|
|
#if PY_VERSION_HEX < 0x030800b4
|
|
0, /*tp_print*/
|
|
#endif
|
|
#if PY_VERSION_HEX >= 0x030800b4
|
|
0, /*tp_vectorcall_offset*/
|
|
#endif
|
|
0, /*tp_getattr*/
|
|
0, /*tp_setattr*/
|
|
#if PY_MAJOR_VERSION < 3
|
|
0, /*tp_compare*/
|
|
#endif
|
|
#if PY_MAJOR_VERSION >= 3
|
|
0, /*tp_as_async*/
|
|
#endif
|
|
0, /*tp_repr*/
|
|
0, /*tp_as_number*/
|
|
0, /*tp_as_sequence*/
|
|
0, /*tp_as_mapping*/
|
|
0, /*tp_hash*/
|
|
0, /*tp_call*/
|
|
0, /*tp_str*/
|
|
0, /*tp_getattro*/
|
|
0, /*tp_setattro*/
|
|
0, /*tp_as_buffer*/
|
|
Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/
|
|
0, /*tp_doc*/
|
|
__pyx_tp_traverse_3GPy_6models_18state_space_cython_Q_handling_Cython, /*tp_traverse*/
|
|
__pyx_tp_clear_3GPy_6models_18state_space_cython_Q_handling_Cython, /*tp_clear*/
|
|
0, /*tp_richcompare*/
|
|
0, /*tp_weaklistoffset*/
|
|
0, /*tp_iter*/
|
|
0, /*tp_iternext*/
|
|
__pyx_methods_3GPy_6models_18state_space_cython_Q_handling_Cython, /*tp_methods*/
|
|
0, /*tp_members*/
|
|
0, /*tp_getset*/
|
|
0, /*tp_base*/
|
|
0, /*tp_dict*/
|
|
0, /*tp_descr_get*/
|
|
0, /*tp_descr_set*/
|
|
0, /*tp_dictoffset*/
|
|
__pyx_pw_3GPy_6models_18state_space_cython_17Q_handling_Cython_1__init__, /*tp_init*/
|
|
0, /*tp_alloc*/
|
|
__pyx_tp_new_3GPy_6models_18state_space_cython_Q_handling_Cython, /*tp_new*/
|
|
0, /*tp_free*/
|
|
0, /*tp_is_gc*/
|
|
0, /*tp_bases*/
|
|
0, /*tp_mro*/
|
|
0, /*tp_cache*/
|
|
0, /*tp_subclasses*/
|
|
0, /*tp_weaklist*/
|
|
0, /*tp_del*/
|
|
0, /*tp_version_tag*/
|
|
#if PY_VERSION_HEX >= 0x030400a1
|
|
0, /*tp_finalize*/
|
|
#endif
|
|
#if PY_VERSION_HEX >= 0x030800b1
|
|
0, /*tp_vectorcall*/
|
|
#endif
|
|
#if PY_VERSION_HEX >= 0x030800b4 && PY_VERSION_HEX < 0x03090000
|
|
0, /*tp_print*/
|
|
#endif
|
|
};
|
|
static struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython __pyx_vtable_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython;
|
|
|
|
static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython(PyTypeObject *t, PyObject *a, PyObject *k) {
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *p;
|
|
PyObject *o = __pyx_tp_new_3GPy_6models_18state_space_cython_Q_handling_Cython(t, a, k);
|
|
if (unlikely(!o)) return 0;
|
|
p = ((struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *)o);
|
|
p->__pyx_base.__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython*)__pyx_vtabptr_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython;
|
|
p->A = ((PyArrayObject *)Py_None); Py_INCREF(Py_None);
|
|
p->dA = ((PyArrayObject *)Py_None); Py_INCREF(Py_None);
|
|
return o;
|
|
}
|
|
|
|
static void __pyx_tp_dealloc_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython(PyObject *o) {
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *p = (struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *)o;
|
|
#if CYTHON_USE_TP_FINALIZE
|
|
if (unlikely(PyType_HasFeature(Py_TYPE(o), Py_TPFLAGS_HAVE_FINALIZE) && Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) {
|
|
if (PyObject_CallFinalizerFromDealloc(o)) return;
|
|
}
|
|
#endif
|
|
PyObject_GC_UnTrack(o);
|
|
Py_CLEAR(p->A);
|
|
Py_CLEAR(p->dA);
|
|
PyObject_GC_Track(o);
|
|
__pyx_tp_dealloc_3GPy_6models_18state_space_cython_Q_handling_Cython(o);
|
|
}
|
|
|
|
static int __pyx_tp_traverse_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython(PyObject *o, visitproc v, void *a) {
|
|
int e;
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *p = (struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *)o;
|
|
e = __pyx_tp_traverse_3GPy_6models_18state_space_cython_Q_handling_Cython(o, v, a); if (e) return e;
|
|
if (p->A) {
|
|
e = (*v)(((PyObject *)p->A), a); if (e) return e;
|
|
}
|
|
if (p->dA) {
|
|
e = (*v)(((PyObject *)p->dA), a); if (e) return e;
|
|
}
|
|
return 0;
|
|
}
|
|
|
|
static int __pyx_tp_clear_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython(PyObject *o) {
|
|
PyObject* tmp;
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *p = (struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *)o;
|
|
__pyx_tp_clear_3GPy_6models_18state_space_cython_Q_handling_Cython(o);
|
|
tmp = ((PyObject*)p->A);
|
|
p->A = ((PyArrayObject *)Py_None); Py_INCREF(Py_None);
|
|
Py_XDECREF(tmp);
|
|
tmp = ((PyObject*)p->dA);
|
|
p->dA = ((PyArrayObject *)Py_None); Py_INCREF(Py_None);
|
|
Py_XDECREF(tmp);
|
|
return 0;
|
|
}
|
|
|
|
static PyMethodDef __pyx_methods_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython[] = {
|
|
{"f_a", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_3f_a, METH_VARARGS|METH_KEYWORDS, __pyx_doc_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_2f_a},
|
|
{"Ak", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_5Ak, METH_VARARGS|METH_KEYWORDS, __pyx_doc_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_4Ak},
|
|
{"dAk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_7dAk, METH_O, 0},
|
|
{"reset", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_9reset, METH_VARARGS|METH_KEYWORDS, __pyx_doc_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_8reset},
|
|
{"__reduce_cython__", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_11__reduce_cython__, METH_NOARGS, 0},
|
|
{"__setstate_cython__", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_13__setstate_cython__, METH_O, 0},
|
|
{0, 0, 0, 0}
|
|
};
|
|
|
|
static PyTypeObject __pyx_type_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython = {
|
|
PyVarObject_HEAD_INIT(0, 0)
|
|
"GPy.models.state_space_cython.Std_Dynamic_Callables_Cython", /*tp_name*/
|
|
sizeof(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython), /*tp_basicsize*/
|
|
0, /*tp_itemsize*/
|
|
__pyx_tp_dealloc_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython, /*tp_dealloc*/
|
|
#if PY_VERSION_HEX < 0x030800b4
|
|
0, /*tp_print*/
|
|
#endif
|
|
#if PY_VERSION_HEX >= 0x030800b4
|
|
0, /*tp_vectorcall_offset*/
|
|
#endif
|
|
0, /*tp_getattr*/
|
|
0, /*tp_setattr*/
|
|
#if PY_MAJOR_VERSION < 3
|
|
0, /*tp_compare*/
|
|
#endif
|
|
#if PY_MAJOR_VERSION >= 3
|
|
0, /*tp_as_async*/
|
|
#endif
|
|
0, /*tp_repr*/
|
|
0, /*tp_as_number*/
|
|
0, /*tp_as_sequence*/
|
|
0, /*tp_as_mapping*/
|
|
0, /*tp_hash*/
|
|
0, /*tp_call*/
|
|
0, /*tp_str*/
|
|
0, /*tp_getattro*/
|
|
0, /*tp_setattro*/
|
|
0, /*tp_as_buffer*/
|
|
Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/
|
|
0, /*tp_doc*/
|
|
__pyx_tp_traverse_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython, /*tp_traverse*/
|
|
__pyx_tp_clear_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython, /*tp_clear*/
|
|
0, /*tp_richcompare*/
|
|
0, /*tp_weaklistoffset*/
|
|
0, /*tp_iter*/
|
|
0, /*tp_iternext*/
|
|
__pyx_methods_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython, /*tp_methods*/
|
|
0, /*tp_members*/
|
|
0, /*tp_getset*/
|
|
0, /*tp_base*/
|
|
0, /*tp_dict*/
|
|
0, /*tp_descr_get*/
|
|
0, /*tp_descr_set*/
|
|
0, /*tp_dictoffset*/
|
|
__pyx_pw_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_1__init__, /*tp_init*/
|
|
0, /*tp_alloc*/
|
|
__pyx_tp_new_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython, /*tp_new*/
|
|
0, /*tp_free*/
|
|
0, /*tp_is_gc*/
|
|
0, /*tp_bases*/
|
|
0, /*tp_mro*/
|
|
0, /*tp_cache*/
|
|
0, /*tp_subclasses*/
|
|
0, /*tp_weaklist*/
|
|
0, /*tp_del*/
|
|
0, /*tp_version_tag*/
|
|
#if PY_VERSION_HEX >= 0x030400a1
|
|
0, /*tp_finalize*/
|
|
#endif
|
|
#if PY_VERSION_HEX >= 0x030800b1
|
|
0, /*tp_vectorcall*/
|
|
#endif
|
|
#if PY_VERSION_HEX >= 0x030800b4 && PY_VERSION_HEX < 0x03090000
|
|
0, /*tp_print*/
|
|
#endif
|
|
};
|
|
static struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_AQcompute_batch_Cython __pyx_vtable_3GPy_6models_18state_space_cython_AQcompute_batch_Cython;
|
|
|
|
static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_AQcompute_batch_Cython(PyTypeObject *t, PyObject *a, PyObject *k) {
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *p;
|
|
PyObject *o = __pyx_tp_new_3GPy_6models_18state_space_cython_Q_handling_Cython(t, a, k);
|
|
if (unlikely(!o)) return 0;
|
|
p = ((struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *)o);
|
|
p->__pyx_base.__pyx_base.__pyx_vtab = (struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython*)__pyx_vtabptr_3GPy_6models_18state_space_cython_AQcompute_batch_Cython;
|
|
p->As = ((PyArrayObject *)Py_None); Py_INCREF(Py_None);
|
|
p->Qs = ((PyArrayObject *)Py_None); Py_INCREF(Py_None);
|
|
p->dAs = ((PyArrayObject *)Py_None); Py_INCREF(Py_None);
|
|
p->dQs = ((PyArrayObject *)Py_None); Py_INCREF(Py_None);
|
|
p->reconstruct_indices = ((PyArrayObject *)Py_None); Py_INCREF(Py_None);
|
|
p->Q_svd_dict = ((PyObject*)Py_None); Py_INCREF(Py_None);
|
|
return o;
|
|
}
|
|
|
|
static void __pyx_tp_dealloc_3GPy_6models_18state_space_cython_AQcompute_batch_Cython(PyObject *o) {
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *p = (struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *)o;
|
|
#if CYTHON_USE_TP_FINALIZE
|
|
if (unlikely(PyType_HasFeature(Py_TYPE(o), Py_TPFLAGS_HAVE_FINALIZE) && Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) {
|
|
if (PyObject_CallFinalizerFromDealloc(o)) return;
|
|
}
|
|
#endif
|
|
PyObject_GC_UnTrack(o);
|
|
Py_CLEAR(p->As);
|
|
Py_CLEAR(p->Qs);
|
|
Py_CLEAR(p->dAs);
|
|
Py_CLEAR(p->dQs);
|
|
Py_CLEAR(p->reconstruct_indices);
|
|
Py_CLEAR(p->Q_svd_dict);
|
|
PyObject_GC_Track(o);
|
|
__pyx_tp_dealloc_3GPy_6models_18state_space_cython_Q_handling_Cython(o);
|
|
}
|
|
|
|
static int __pyx_tp_traverse_3GPy_6models_18state_space_cython_AQcompute_batch_Cython(PyObject *o, visitproc v, void *a) {
|
|
int e;
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *p = (struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *)o;
|
|
e = __pyx_tp_traverse_3GPy_6models_18state_space_cython_Q_handling_Cython(o, v, a); if (e) return e;
|
|
if (p->As) {
|
|
e = (*v)(((PyObject *)p->As), a); if (e) return e;
|
|
}
|
|
if (p->Qs) {
|
|
e = (*v)(((PyObject *)p->Qs), a); if (e) return e;
|
|
}
|
|
if (p->dAs) {
|
|
e = (*v)(((PyObject *)p->dAs), a); if (e) return e;
|
|
}
|
|
if (p->dQs) {
|
|
e = (*v)(((PyObject *)p->dQs), a); if (e) return e;
|
|
}
|
|
if (p->reconstruct_indices) {
|
|
e = (*v)(((PyObject *)p->reconstruct_indices), a); if (e) return e;
|
|
}
|
|
if (p->Q_svd_dict) {
|
|
e = (*v)(p->Q_svd_dict, a); if (e) return e;
|
|
}
|
|
return 0;
|
|
}
|
|
|
|
static int __pyx_tp_clear_3GPy_6models_18state_space_cython_AQcompute_batch_Cython(PyObject *o) {
|
|
PyObject* tmp;
|
|
struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *p = (struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *)o;
|
|
__pyx_tp_clear_3GPy_6models_18state_space_cython_Q_handling_Cython(o);
|
|
tmp = ((PyObject*)p->As);
|
|
p->As = ((PyArrayObject *)Py_None); Py_INCREF(Py_None);
|
|
Py_XDECREF(tmp);
|
|
tmp = ((PyObject*)p->Qs);
|
|
p->Qs = ((PyArrayObject *)Py_None); Py_INCREF(Py_None);
|
|
Py_XDECREF(tmp);
|
|
tmp = ((PyObject*)p->dAs);
|
|
p->dAs = ((PyArrayObject *)Py_None); Py_INCREF(Py_None);
|
|
Py_XDECREF(tmp);
|
|
tmp = ((PyObject*)p->dQs);
|
|
p->dQs = ((PyArrayObject *)Py_None); Py_INCREF(Py_None);
|
|
Py_XDECREF(tmp);
|
|
tmp = ((PyObject*)p->reconstruct_indices);
|
|
p->reconstruct_indices = ((PyArrayObject *)Py_None); Py_INCREF(Py_None);
|
|
Py_XDECREF(tmp);
|
|
tmp = ((PyObject*)p->Q_svd_dict);
|
|
p->Q_svd_dict = ((PyObject*)Py_None); Py_INCREF(Py_None);
|
|
Py_XDECREF(tmp);
|
|
return 0;
|
|
}
|
|
|
|
static PyMethodDef __pyx_methods_3GPy_6models_18state_space_cython_AQcompute_batch_Cython[] = {
|
|
{"f_a", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_3f_a, METH_VARARGS|METH_KEYWORDS, __pyx_doc_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_2f_a},
|
|
{"reset", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_5reset, METH_VARARGS|METH_KEYWORDS, __pyx_doc_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_4reset},
|
|
{"Ak", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_7Ak, METH_VARARGS|METH_KEYWORDS, 0},
|
|
{"Qk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_9Qk, METH_O, 0},
|
|
{"dAk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_11dAk, METH_O, 0},
|
|
{"dQk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_13dQk, METH_O, 0},
|
|
{"Q_srk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_15Q_srk, METH_O, __pyx_doc_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_14Q_srk},
|
|
{"Q_inverse", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_17Q_inverse, METH_VARARGS|METH_KEYWORDS, __pyx_doc_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_16Q_inverse},
|
|
{"__reduce_cython__", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_19__reduce_cython__, METH_NOARGS, 0},
|
|
{"__setstate_cython__", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_21__setstate_cython__, METH_O, 0},
|
|
{0, 0, 0, 0}
|
|
};
|
|
|
|
static PyTypeObject __pyx_type_3GPy_6models_18state_space_cython_AQcompute_batch_Cython = {
|
|
PyVarObject_HEAD_INIT(0, 0)
|
|
"GPy.models.state_space_cython.AQcompute_batch_Cython", /*tp_name*/
|
|
sizeof(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython), /*tp_basicsize*/
|
|
0, /*tp_itemsize*/
|
|
__pyx_tp_dealloc_3GPy_6models_18state_space_cython_AQcompute_batch_Cython, /*tp_dealloc*/
|
|
#if PY_VERSION_HEX < 0x030800b4
|
|
0, /*tp_print*/
|
|
#endif
|
|
#if PY_VERSION_HEX >= 0x030800b4
|
|
0, /*tp_vectorcall_offset*/
|
|
#endif
|
|
0, /*tp_getattr*/
|
|
0, /*tp_setattr*/
|
|
#if PY_MAJOR_VERSION < 3
|
|
0, /*tp_compare*/
|
|
#endif
|
|
#if PY_MAJOR_VERSION >= 3
|
|
0, /*tp_as_async*/
|
|
#endif
|
|
0, /*tp_repr*/
|
|
0, /*tp_as_number*/
|
|
0, /*tp_as_sequence*/
|
|
0, /*tp_as_mapping*/
|
|
0, /*tp_hash*/
|
|
0, /*tp_call*/
|
|
0, /*tp_str*/
|
|
0, /*tp_getattro*/
|
|
0, /*tp_setattro*/
|
|
0, /*tp_as_buffer*/
|
|
Py_TPFLAGS_DEFAULT|Py_TPFLAGS_HAVE_VERSION_TAG|Py_TPFLAGS_CHECKTYPES|Py_TPFLAGS_HAVE_NEWBUFFER|Py_TPFLAGS_BASETYPE|Py_TPFLAGS_HAVE_GC, /*tp_flags*/
|
|
"\n Class for calculating matrices A, Q, dA, dQ of the discrete Kalman Filter\n from the matrices F, L, Qc, P_ing, dF, dQc, dP_inf of the continuos state\n equation. dt - time steps. \n \n It has the same interface as AQcompute_once.\n \n It computes matrices for all time steps. This object is used when\n there are not so many (controlled by internal variable) \n different time steps and storing all the matrices do not take too much memory.\n \n Since all the matrices are computed all together, this object can be used\n in smoother without repeating the computations. \n ", /*tp_doc*/
|
|
__pyx_tp_traverse_3GPy_6models_18state_space_cython_AQcompute_batch_Cython, /*tp_traverse*/
|
|
__pyx_tp_clear_3GPy_6models_18state_space_cython_AQcompute_batch_Cython, /*tp_clear*/
|
|
0, /*tp_richcompare*/
|
|
0, /*tp_weaklistoffset*/
|
|
0, /*tp_iter*/
|
|
0, /*tp_iternext*/
|
|
__pyx_methods_3GPy_6models_18state_space_cython_AQcompute_batch_Cython, /*tp_methods*/
|
|
0, /*tp_members*/
|
|
0, /*tp_getset*/
|
|
0, /*tp_base*/
|
|
0, /*tp_dict*/
|
|
0, /*tp_descr_get*/
|
|
0, /*tp_descr_set*/
|
|
0, /*tp_dictoffset*/
|
|
__pyx_pw_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_1__init__, /*tp_init*/
|
|
0, /*tp_alloc*/
|
|
__pyx_tp_new_3GPy_6models_18state_space_cython_AQcompute_batch_Cython, /*tp_new*/
|
|
0, /*tp_free*/
|
|
0, /*tp_is_gc*/
|
|
0, /*tp_bases*/
|
|
0, /*tp_mro*/
|
|
0, /*tp_cache*/
|
|
0, /*tp_subclasses*/
|
|
0, /*tp_weaklist*/
|
|
0, /*tp_del*/
|
|
0, /*tp_version_tag*/
|
|
#if PY_VERSION_HEX >= 0x030400a1
|
|
0, /*tp_finalize*/
|
|
#endif
|
|
#if PY_VERSION_HEX >= 0x030800b1
|
|
0, /*tp_vectorcall*/
|
|
#endif
|
|
#if PY_VERSION_HEX >= 0x030800b4 && PY_VERSION_HEX < 0x03090000
|
|
0, /*tp_print*/
|
|
#endif
|
|
};
|
|
|
|
static PyMethodDef __pyx_methods[] = {
|
|
{0, 0, 0, 0}
|
|
};
|
|
|
|
#if PY_MAJOR_VERSION >= 3
|
|
#if CYTHON_PEP489_MULTI_PHASE_INIT
|
|
static PyObject* __pyx_pymod_create(PyObject *spec, PyModuleDef *def); /*proto*/
|
|
static int __pyx_pymod_exec_state_space_cython(PyObject* module); /*proto*/
|
|
static PyModuleDef_Slot __pyx_moduledef_slots[] = {
|
|
{Py_mod_create, (void*)__pyx_pymod_create},
|
|
{Py_mod_exec, (void*)__pyx_pymod_exec_state_space_cython},
|
|
{0, NULL}
|
|
};
|
|
#endif
|
|
|
|
static struct PyModuleDef __pyx_moduledef = {
|
|
PyModuleDef_HEAD_INIT,
|
|
"state_space_cython",
|
|
__pyx_k_Contains_some_cython_code_for_s, /* m_doc */
|
|
#if CYTHON_PEP489_MULTI_PHASE_INIT
|
|
0, /* m_size */
|
|
#else
|
|
-1, /* m_size */
|
|
#endif
|
|
__pyx_methods /* m_methods */,
|
|
#if CYTHON_PEP489_MULTI_PHASE_INIT
|
|
__pyx_moduledef_slots, /* m_slots */
|
|
#else
|
|
NULL, /* m_reload */
|
|
#endif
|
|
NULL, /* m_traverse */
|
|
NULL, /* m_clear */
|
|
NULL /* m_free */
|
|
};
|
|
#endif
|
|
#ifndef CYTHON_SMALL_CODE
|
|
#if defined(__clang__)
|
|
#define CYTHON_SMALL_CODE
|
|
#elif defined(__GNUC__) && (__GNUC__ > 4 || (__GNUC__ == 4 && __GNUC_MINOR__ >= 3))
|
|
#define CYTHON_SMALL_CODE __attribute__((cold))
|
|
#else
|
|
#define CYTHON_SMALL_CODE
|
|
#endif
|
|
#endif
|
|
|
|
static __Pyx_StringTabEntry __pyx_string_tab[] = {
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{&__pyx_n_s_A, __pyx_k_A, sizeof(__pyx_k_A), 0, 0, 1, 1},
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{&__pyx_n_s_AQcompute_batch_Cython, __pyx_k_AQcompute_batch_Cython, sizeof(__pyx_k_AQcompute_batch_Cython), 0, 0, 1, 1},
|
|
{&__pyx_n_s_A_time_var_index, __pyx_k_A_time_var_index, sizeof(__pyx_k_A_time_var_index), 0, 0, 1, 1},
|
|
{&__pyx_n_s_Ak, __pyx_k_Ak, sizeof(__pyx_k_Ak), 0, 0, 1, 1},
|
|
{&__pyx_n_s_As, __pyx_k_As, sizeof(__pyx_k_As), 0, 0, 1, 1},
|
|
{&__pyx_n_s_DTYPE, __pyx_k_DTYPE, sizeof(__pyx_k_DTYPE), 0, 0, 1, 1},
|
|
{&__pyx_n_s_DTYPE_int, __pyx_k_DTYPE_int, sizeof(__pyx_k_DTYPE_int), 0, 0, 1, 1},
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|
{&__pyx_n_s_Dynamic_Callables_Cython, __pyx_k_Dynamic_Callables_Cython, sizeof(__pyx_k_Dynamic_Callables_Cython), 0, 0, 1, 1},
|
|
{&__pyx_n_s_GPy_models_state_space_cython, __pyx_k_GPy_models_state_space_cython, sizeof(__pyx_k_GPy_models_state_space_cython), 0, 0, 1, 1},
|
|
{&__pyx_kp_s_GPy_models_state_space_cython_py, __pyx_k_GPy_models_state_space_cython_py, sizeof(__pyx_k_GPy_models_state_space_cython_py), 0, 0, 1, 0},
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{&__pyx_n_s_H, __pyx_k_H, sizeof(__pyx_k_H), 0, 0, 1, 1},
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{&__pyx_n_s_H_time_var_index, __pyx_k_H_time_var_index, sizeof(__pyx_k_H_time_var_index), 0, 0, 1, 1},
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{&__pyx_n_s_Hk, __pyx_k_Hk, sizeof(__pyx_k_Hk), 0, 0, 1, 1},
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{&__pyx_n_s_ImportError, __pyx_k_ImportError, sizeof(__pyx_k_ImportError), 0, 0, 1, 1},
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{&__pyx_kp_s_Incompatible_checksums_s_vs_0x14, __pyx_k_Incompatible_checksums_s_vs_0x14, sizeof(__pyx_k_Incompatible_checksums_s_vs_0x14), 0, 0, 1, 0},
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{&__pyx_kp_s_Incompatible_checksums_s_vs_0x70, __pyx_k_Incompatible_checksums_s_vs_0x70, sizeof(__pyx_k_Incompatible_checksums_s_vs_0x70), 0, 0, 1, 0},
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{&__pyx_kp_s_Incompatible_checksums_s_vs_0x77, __pyx_k_Incompatible_checksums_s_vs_0x77, sizeof(__pyx_k_Incompatible_checksums_s_vs_0x77), 0, 0, 1, 0},
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{&__pyx_kp_s_Incompatible_checksums_s_vs_0x9e, __pyx_k_Incompatible_checksums_s_vs_0x9e, sizeof(__pyx_k_Incompatible_checksums_s_vs_0x9e), 0, 0, 1, 0},
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{&__pyx_kp_s_Incompatible_checksums_s_vs_0xd4, __pyx_k_Incompatible_checksums_s_vs_0xd4, sizeof(__pyx_k_Incompatible_checksums_s_vs_0xd4), 0, 0, 1, 0},
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{&__pyx_kp_s_Incompatible_checksums_s_vs_0xdf, __pyx_k_Incompatible_checksums_s_vs_0xdf, sizeof(__pyx_k_Incompatible_checksums_s_vs_0xdf), 0, 0, 1, 0},
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{&__pyx_n_s_K, __pyx_k_K, sizeof(__pyx_k_K), 0, 0, 1, 1},
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{&__pyx_kp_s_Kalman_Filter_Update_SVD_S_is_ne, __pyx_k_Kalman_Filter_Update_SVD_S_is_ne, sizeof(__pyx_k_Kalman_Filter_Update_SVD_S_is_ne), 0, 0, 1, 0},
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{&__pyx_n_s_M, __pyx_k_M, sizeof(__pyx_k_M), 0, 0, 1, 1},
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{&__pyx_n_s_Measurement_Callables_Cython, __pyx_k_Measurement_Callables_Cython, sizeof(__pyx_k_Measurement_Callables_Cython), 0, 0, 1, 1},
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{&__pyx_kp_s_Measurement_dimension_larger_the, __pyx_k_Measurement_dimension_larger_the, sizeof(__pyx_k_Measurement_dimension_larger_the), 0, 0, 1, 0},
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{&__pyx_kp_s_Nan_measurements_are_currently_n, __pyx_k_Nan_measurements_are_currently_n, sizeof(__pyx_k_Nan_measurements_are_currently_n), 0, 0, 1, 0},
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{&__pyx_kp_s_Nan_values_in_likelihood_update, __pyx_k_Nan_values_in_likelihood_update, sizeof(__pyx_k_Nan_values_in_likelihood_update), 0, 0, 1, 0},
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{&__pyx_n_s_NotImplemented, __pyx_k_NotImplemented, sizeof(__pyx_k_NotImplemented), 0, 0, 1, 1},
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{&__pyx_n_s_P, __pyx_k_P, sizeof(__pyx_k_P), 0, 0, 1, 1},
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{&__pyx_n_s_P_init, __pyx_k_P_init, sizeof(__pyx_k_P_init), 0, 0, 1, 1},
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{&__pyx_n_s_P_pred, __pyx_k_P_pred, sizeof(__pyx_k_P_pred), 0, 0, 1, 1},
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{&__pyx_n_s_P_upd, __pyx_k_P_upd, sizeof(__pyx_k_P_upd), 0, 0, 1, 1},
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{&__pyx_n_s_PickleError, __pyx_k_PickleError, sizeof(__pyx_k_PickleError), 0, 0, 1, 1},
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{&__pyx_n_s_Prev_cov, __pyx_k_Prev_cov, sizeof(__pyx_k_Prev_cov), 0, 0, 1, 1},
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{&__pyx_n_s_Q, __pyx_k_Q, sizeof(__pyx_k_Q), 0, 0, 1, 1},
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{&__pyx_n_s_Q_handling_Cython, __pyx_k_Q_handling_Cython, sizeof(__pyx_k_Q_handling_Cython), 0, 0, 1, 1},
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{&__pyx_n_s_Q_inverse, __pyx_k_Q_inverse, sizeof(__pyx_k_Q_inverse), 0, 0, 1, 1},
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{&__pyx_n_s_Q_inverse_dict, __pyx_k_Q_inverse_dict, sizeof(__pyx_k_Q_inverse_dict), 0, 0, 1, 1},
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{&__pyx_n_s_Q_square_root_dict, __pyx_k_Q_square_root_dict, sizeof(__pyx_k_Q_square_root_dict), 0, 0, 1, 1},
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{&__pyx_n_s_Q_sr, __pyx_k_Q_sr, sizeof(__pyx_k_Q_sr), 0, 0, 1, 1},
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{&__pyx_n_s_Q_srk, __pyx_k_Q_srk, sizeof(__pyx_k_Q_srk), 0, 0, 1, 1},
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{&__pyx_n_s_Q_time_var_index, __pyx_k_Q_time_var_index, sizeof(__pyx_k_Q_time_var_index), 0, 0, 1, 1},
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{&__pyx_n_s_Qk, __pyx_k_Qk, sizeof(__pyx_k_Qk), 0, 0, 1, 1},
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{&__pyx_n_s_Qs, __pyx_k_Qs, sizeof(__pyx_k_Qs), 0, 0, 1, 1},
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{&__pyx_n_s_R, __pyx_k_R, sizeof(__pyx_k_R), 0, 0, 1, 1},
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{&__pyx_n_s_R_handling_Cython, __pyx_k_R_handling_Cython, sizeof(__pyx_k_R_handling_Cython), 0, 0, 1, 1},
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{&__pyx_n_s_R_isr, __pyx_k_R_isr, sizeof(__pyx_k_R_isr), 0, 0, 1, 1},
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{&__pyx_n_s_R_isrk, __pyx_k_R_isrk, sizeof(__pyx_k_R_isrk), 0, 0, 1, 1},
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{&__pyx_n_s_R_time_var_index, __pyx_k_R_time_var_index, sizeof(__pyx_k_R_time_var_index), 0, 0, 1, 1},
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{&__pyx_n_s_Rk, __pyx_k_Rk, sizeof(__pyx_k_Rk), 0, 0, 1, 1},
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{&__pyx_n_s_S_new, __pyx_k_S_new, sizeof(__pyx_k_S_new), 0, 0, 1, 1},
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{&__pyx_n_s_S_old, __pyx_k_S_old, sizeof(__pyx_k_S_old), 0, 0, 1, 1},
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{&__pyx_n_s_S_pred, __pyx_k_S_pred, sizeof(__pyx_k_S_pred), 0, 0, 1, 1},
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{&__pyx_n_s_S_svd, __pyx_k_S_svd, sizeof(__pyx_k_S_svd), 0, 0, 1, 1},
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{&__pyx_n_s_S_upd, __pyx_k_S_upd, sizeof(__pyx_k_S_upd), 0, 0, 1, 1},
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{&__pyx_n_s_Std_Dynamic_Callables_Cython, __pyx_k_Std_Dynamic_Callables_Cython, sizeof(__pyx_k_Std_Dynamic_Callables_Cython), 0, 0, 1, 1},
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{&__pyx_n_s_Std_Measurement_Callables_Cython, __pyx_k_Std_Measurement_Callables_Cython, sizeof(__pyx_k_Std_Measurement_Callables_Cython), 0, 0, 1, 1},
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{&__pyx_n_s_T, __pyx_k_T, sizeof(__pyx_k_T), 0, 0, 1, 1},
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{&__pyx_n_s_V_new, __pyx_k_V_new, sizeof(__pyx_k_V_new), 0, 0, 1, 1},
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{&__pyx_n_s_V_old, __pyx_k_V_old, sizeof(__pyx_k_V_old), 0, 0, 1, 1},
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{&__pyx_n_s_V_pred, __pyx_k_V_pred, sizeof(__pyx_k_V_pred), 0, 0, 1, 1},
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{&__pyx_n_s_ValueError, __pyx_k_ValueError, sizeof(__pyx_k_ValueError), 0, 0, 1, 1},
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{&__pyx_n_s_Vh, __pyx_k_Vh, sizeof(__pyx_k_Vh), 0, 0, 1, 1},
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{&__pyx_n_s_X, __pyx_k_X, sizeof(__pyx_k_X), 0, 0, 1, 1},
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{&__pyx_n_s_Y, __pyx_k_Y, sizeof(__pyx_k_Y), 0, 0, 1, 1},
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{&__pyx_n_s_all, __pyx_k_all, sizeof(__pyx_k_all), 0, 0, 1, 1},
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{&__pyx_n_s_any, __pyx_k_any, sizeof(__pyx_k_any), 0, 0, 1, 1},
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{&__pyx_n_s_axis, __pyx_k_axis, sizeof(__pyx_k_axis), 0, 0, 1, 1},
|
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{&__pyx_n_s_calc_grad_log_likelihood, __pyx_k_calc_grad_log_likelihood, sizeof(__pyx_k_calc_grad_log_likelihood), 0, 0, 1, 1},
|
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{&__pyx_n_s_calc_log_likelihood, __pyx_k_calc_log_likelihood, sizeof(__pyx_k_calc_log_likelihood), 0, 0, 1, 1},
|
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{&__pyx_n_s_check_finite, __pyx_k_check_finite, sizeof(__pyx_k_check_finite), 0, 0, 1, 1},
|
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{&__pyx_n_s_cline_in_traceback, __pyx_k_cline_in_traceback, sizeof(__pyx_k_cline_in_traceback), 0, 0, 1, 1},
|
|
{&__pyx_n_s_compute_derivatives, __pyx_k_compute_derivatives, sizeof(__pyx_k_compute_derivatives), 0, 0, 1, 1},
|
|
{&__pyx_n_s_compute_uv, __pyx_k_compute_uv, sizeof(__pyx_k_compute_uv), 0, 0, 1, 1},
|
|
{&__pyx_n_s_cont_discr_kalman_filter_raw_Cy, __pyx_k_cont_discr_kalman_filter_raw_Cy, sizeof(__pyx_k_cont_discr_kalman_filter_raw_Cy), 0, 0, 1, 1},
|
|
{&__pyx_kp_s_cython_Ak_is_not_implemented, __pyx_k_cython_Ak_is_not_implemented, sizeof(__pyx_k_cython_Ak_is_not_implemented), 0, 0, 1, 0},
|
|
{&__pyx_kp_s_cython_Hk_is_not_implemented, __pyx_k_cython_Hk_is_not_implemented, sizeof(__pyx_k_cython_Hk_is_not_implemented), 0, 0, 1, 0},
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{&__pyx_kp_s_cython_Q_srk_is_not_implemented, __pyx_k_cython_Q_srk_is_not_implemented, sizeof(__pyx_k_cython_Q_srk_is_not_implemented), 0, 0, 1, 0},
|
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{&__pyx_kp_s_cython_Qk_is_not_implemented, __pyx_k_cython_Qk_is_not_implemented, sizeof(__pyx_k_cython_Qk_is_not_implemented), 0, 0, 1, 0},
|
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{&__pyx_kp_s_cython_Rk_is_not_implemented, __pyx_k_cython_Rk_is_not_implemented, sizeof(__pyx_k_cython_Rk_is_not_implemented), 0, 0, 1, 0},
|
|
{&__pyx_kp_s_cython_dAk_is_not_implemented, __pyx_k_cython_dAk_is_not_implemented, sizeof(__pyx_k_cython_dAk_is_not_implemented), 0, 0, 1, 0},
|
|
{&__pyx_kp_s_cython_dQk_is_not_implemented, __pyx_k_cython_dQk_is_not_implemented, sizeof(__pyx_k_cython_dQk_is_not_implemented), 0, 0, 1, 0},
|
|
{&__pyx_kp_s_cython_f_a_is_not_implemented, __pyx_k_cython_f_a_is_not_implemented, sizeof(__pyx_k_cython_f_a_is_not_implemented), 0, 0, 1, 0},
|
|
{&__pyx_kp_s_cython_reset_is_not_implemented, __pyx_k_cython_reset_is_not_implemented, sizeof(__pyx_k_cython_reset_is_not_implemented), 0, 0, 1, 0},
|
|
{&__pyx_n_s_dA, __pyx_k_dA, sizeof(__pyx_k_dA), 0, 0, 1, 1},
|
|
{&__pyx_n_s_dA_all_params, __pyx_k_dA_all_params, sizeof(__pyx_k_dA_all_params), 0, 0, 1, 1},
|
|
{&__pyx_kp_s_dA_derivative_is_None, __pyx_k_dA_derivative_is_None, sizeof(__pyx_k_dA_derivative_is_None), 0, 0, 1, 0},
|
|
{&__pyx_n_s_dAk, __pyx_k_dAk, sizeof(__pyx_k_dAk), 0, 0, 1, 1},
|
|
{&__pyx_n_s_dAs, __pyx_k_dAs, sizeof(__pyx_k_dAs), 0, 0, 1, 1},
|
|
{&__pyx_n_s_dH, __pyx_k_dH, sizeof(__pyx_k_dH), 0, 0, 1, 1},
|
|
{&__pyx_n_s_dH_all_params, __pyx_k_dH_all_params, sizeof(__pyx_k_dH_all_params), 0, 0, 1, 1},
|
|
{&__pyx_kp_s_dH_derivative_is_None, __pyx_k_dH_derivative_is_None, sizeof(__pyx_k_dH_derivative_is_None), 0, 0, 1, 0},
|
|
{&__pyx_n_s_dHk, __pyx_k_dHk, sizeof(__pyx_k_dHk), 0, 0, 1, 1},
|
|
{&__pyx_n_s_dK, __pyx_k_dK, sizeof(__pyx_k_dK), 0, 0, 1, 1},
|
|
{&__pyx_n_s_dP_init, __pyx_k_dP_init, sizeof(__pyx_k_dP_init), 0, 0, 1, 1},
|
|
{&__pyx_n_s_dP_pred, __pyx_k_dP_pred, sizeof(__pyx_k_dP_pred), 0, 0, 1, 1},
|
|
{&__pyx_n_s_dP_pred_all_params, __pyx_k_dP_pred_all_params, sizeof(__pyx_k_dP_pred_all_params), 0, 0, 1, 1},
|
|
{&__pyx_n_s_dP_upd, __pyx_k_dP_upd, sizeof(__pyx_k_dP_upd), 0, 0, 1, 1},
|
|
{&__pyx_n_s_dQ, __pyx_k_dQ, sizeof(__pyx_k_dQ), 0, 0, 1, 1},
|
|
{&__pyx_n_s_dQ_all_params, __pyx_k_dQ_all_params, sizeof(__pyx_k_dQ_all_params), 0, 0, 1, 1},
|
|
{&__pyx_kp_s_dQ_derivative_is_None, __pyx_k_dQ_derivative_is_None, sizeof(__pyx_k_dQ_derivative_is_None), 0, 0, 1, 0},
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/* "GPy/models/state_space_cython.pyx":23
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*
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/* "GPy/models/state_space_cython.pyx":26
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*
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* cpdef Ak(self, int k, np.ndarray[DTYPE_t, ndim=2] m, np.ndarray[DTYPE_t, ndim=2] P): # returns state iteration matrix
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*
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/* "GPy/models/state_space_cython.pyx":29
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*
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*
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/* "GPy/models/state_space_cython.pyx":32
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*
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*
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* cpdef dAk(self, int k):
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*/
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__pyx_tuple__4 = PyTuple_Pack(1, __pyx_kp_s_cython_Q_srk_is_not_implemented); if (unlikely(!__pyx_tuple__4)) __PYX_ERR(0, 32, __pyx_L1_error)
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/* "GPy/models/state_space_cython.pyx":35
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*
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* cpdef dAk(self, int k):
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* raise NotImplemented("(cython) dAk is not implemented!") # <<<<<<<<<<<<<<
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|
*
|
|
* cpdef dQk(self, int k):
|
|
*/
|
|
__pyx_tuple__5 = PyTuple_Pack(1, __pyx_kp_s_cython_dAk_is_not_implemented); if (unlikely(!__pyx_tuple__5)) __PYX_ERR(0, 35, __pyx_L1_error)
|
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__Pyx_GOTREF(__pyx_tuple__5);
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__Pyx_GIVEREF(__pyx_tuple__5);
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/* "GPy/models/state_space_cython.pyx":38
|
|
*
|
|
* cpdef dQk(self, int k):
|
|
* raise NotImplemented("(cython) dQk is not implemented!") # <<<<<<<<<<<<<<
|
|
*
|
|
* cpdef reset(self, bint compute_derivatives = False):
|
|
*/
|
|
__pyx_tuple__6 = PyTuple_Pack(1, __pyx_kp_s_cython_dQk_is_not_implemented); if (unlikely(!__pyx_tuple__6)) __PYX_ERR(0, 38, __pyx_L1_error)
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__Pyx_GOTREF(__pyx_tuple__6);
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__Pyx_GIVEREF(__pyx_tuple__6);
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|
|
/* "GPy/models/state_space_cython.pyx":41
|
|
*
|
|
* cpdef reset(self, bint compute_derivatives = False):
|
|
* raise NotImplemented("(cython) reset is not implemented!") # <<<<<<<<<<<<<<
|
|
*
|
|
* # Template class for measurement callables
|
|
*/
|
|
__pyx_tuple__7 = PyTuple_Pack(1, __pyx_kp_s_cython_reset_is_not_implemented); if (unlikely(!__pyx_tuple__7)) __PYX_ERR(0, 41, __pyx_L1_error)
|
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__Pyx_GOTREF(__pyx_tuple__7);
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__Pyx_GIVEREF(__pyx_tuple__7);
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|
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/* "GPy/models/state_space_cython.pyx":49
|
|
*
|
|
* cpdef Hk(self, int k, np.ndarray[DTYPE_t, ndim=2] m_pred, np.ndarray[DTYPE_t, ndim=2] P_pred): # returns state iteration matrix
|
|
* raise NotImplemented("(cython) Hk is not implemented!") # <<<<<<<<<<<<<<
|
|
*
|
|
* cpdef Rk(self, int k):
|
|
*/
|
|
__pyx_tuple__8 = PyTuple_Pack(1, __pyx_kp_s_cython_Hk_is_not_implemented); if (unlikely(!__pyx_tuple__8)) __PYX_ERR(0, 49, __pyx_L1_error)
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__Pyx_GOTREF(__pyx_tuple__8);
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__Pyx_GIVEREF(__pyx_tuple__8);
|
|
|
|
/* "GPy/models/state_space_cython.pyx":52
|
|
*
|
|
* cpdef Rk(self, int k):
|
|
* raise NotImplemented("(cython) Rk is not implemented!") # <<<<<<<<<<<<<<
|
|
*
|
|
* cpdef R_isrk(self, int k):
|
|
*/
|
|
__pyx_tuple__9 = PyTuple_Pack(1, __pyx_kp_s_cython_Rk_is_not_implemented); if (unlikely(!__pyx_tuple__9)) __PYX_ERR(0, 52, __pyx_L1_error)
|
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__Pyx_GOTREF(__pyx_tuple__9);
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__Pyx_GIVEREF(__pyx_tuple__9);
|
|
|
|
/* "GPy/models/state_space_cython.pyx":119
|
|
*
|
|
* cpdef Rk(self, int k):
|
|
* return self.R[:,:, <int>self.index[self.R_time_var_index, k]] # <<<<<<<<<<<<<<
|
|
*
|
|
*
|
|
*/
|
|
__pyx_slice__10 = PySlice_New(Py_None, Py_None, Py_None); if (unlikely(!__pyx_slice__10)) __PYX_ERR(0, 119, __pyx_L1_error)
|
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__Pyx_GOTREF(__pyx_slice__10);
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|
__Pyx_GIVEREF(__pyx_slice__10);
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|
|
|
/* "GPy/models/state_space_cython.pyx":124
|
|
* cpdef dRk(self,int k):
|
|
* if self.dR is None:
|
|
* raise ValueError("dR derivative is None") # <<<<<<<<<<<<<<
|
|
*
|
|
* return self.dR # the same dirivative on each iteration
|
|
*/
|
|
__pyx_tuple__11 = PyTuple_Pack(1, __pyx_kp_s_dR_derivative_is_None); if (unlikely(!__pyx_tuple__11)) __PYX_ERR(0, 124, __pyx_L1_error)
|
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__Pyx_GOTREF(__pyx_tuple__11);
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|
__Pyx_GIVEREF(__pyx_tuple__11);
|
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|
|
/* "GPy/models/state_space_cython.pyx":206
|
|
* cpdef dHk(self,int k):
|
|
* if self.dH is None:
|
|
* raise ValueError("dH derivative is None") # <<<<<<<<<<<<<<
|
|
*
|
|
* return self.dH # the same dirivative on each iteration
|
|
*/
|
|
__pyx_tuple__12 = PyTuple_Pack(1, __pyx_kp_s_dH_derivative_is_None); if (unlikely(!__pyx_tuple__12)) __PYX_ERR(0, 206, __pyx_L1_error)
|
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__Pyx_GOTREF(__pyx_tuple__12);
|
|
__Pyx_GIVEREF(__pyx_tuple__12);
|
|
|
|
/* "GPy/models/state_space_cython.pyx":273
|
|
* cpdef dQk(self, int k):
|
|
* if self.dQ is None:
|
|
* raise ValueError("dQ derivative is None") # <<<<<<<<<<<<<<
|
|
*
|
|
* return self.dQ # the same dirivative on each iteration
|
|
*/
|
|
__pyx_tuple__13 = PyTuple_Pack(1, __pyx_kp_s_dQ_derivative_is_None); if (unlikely(!__pyx_tuple__13)) __PYX_ERR(0, 273, __pyx_L1_error)
|
|
__Pyx_GOTREF(__pyx_tuple__13);
|
|
__Pyx_GIVEREF(__pyx_tuple__13);
|
|
|
|
/* "GPy/models/state_space_cython.pyx":360
|
|
* cpdef dAk(self, int k):
|
|
* if self.dA is None:
|
|
* raise ValueError("dA derivative is None") # <<<<<<<<<<<<<<
|
|
*
|
|
* return self.dA # the same dirivative on each iteration
|
|
*/
|
|
__pyx_tuple__14 = PyTuple_Pack(1, __pyx_kp_s_dA_derivative_is_None); if (unlikely(!__pyx_tuple__14)) __PYX_ERR(0, 360, __pyx_L1_error)
|
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__Pyx_GOTREF(__pyx_tuple__14);
|
|
__Pyx_GIVEREF(__pyx_tuple__14);
|
|
|
|
/* "GPy/models/state_space_cython.pyx":817
|
|
* #log_likelihood_update = log_likelihood_update[0,0] # to make int
|
|
* if np.any(np.isnan(log_likelihood_update)): # some member in P_pred is None.
|
|
* raise ValueError("Nan values in likelihood update!") # <<<<<<<<<<<<<<
|
|
* else:
|
|
* log_likelihood_update = None
|
|
*/
|
|
__pyx_tuple__15 = PyTuple_Pack(1, __pyx_kp_s_Nan_values_in_likelihood_update); if (unlikely(!__pyx_tuple__15)) __PYX_ERR(0, 817, __pyx_L1_error)
|
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__Pyx_GOTREF(__pyx_tuple__15);
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__Pyx_GIVEREF(__pyx_tuple__15);
|
|
|
|
/* "GPy/models/state_space_cython.pyx":823
|
|
* else:
|
|
* measurement_dim_gt_one = True
|
|
* raise ValueError("""Measurement dimension larger then 1 is currently not supported""") # <<<<<<<<<<<<<<
|
|
*
|
|
* # Old method of computing updated covariance (for testing) ->
|
|
*/
|
|
__pyx_tuple__16 = PyTuple_Pack(1, __pyx_kp_s_Measurement_dimension_larger_the); if (unlikely(!__pyx_tuple__16)) __PYX_ERR(0, 823, __pyx_L1_error)
|
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__Pyx_GOTREF(__pyx_tuple__16);
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__Pyx_GIVEREF(__pyx_tuple__16);
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|
|
/* "GPy/models/state_space_cython.pyx":928
|
|
* # Mean estimations. Initial values will be included
|
|
* cdef np.ndarray[DTYPE_t, ndim=3] M = np.empty(((steps_no+1),state_dim,time_series_no), dtype=DTYPE)
|
|
* M[0,:,:] = m_init # Initialize mean values # <<<<<<<<<<<<<<
|
|
* # Variance estimations. Initial values will be included
|
|
* cdef np.ndarray[DTYPE_t, ndim=3] P = np.empty(((steps_no+1),state_dim,state_dim))
|
|
*/
|
|
__pyx_tuple__17 = PyTuple_Pack(3, __pyx_int_0, __pyx_slice__10, __pyx_slice__10); if (unlikely(!__pyx_tuple__17)) __PYX_ERR(0, 928, __pyx_L1_error)
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__Pyx_GOTREF(__pyx_tuple__17);
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__Pyx_GIVEREF(__pyx_tuple__17);
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/* "GPy/models/state_space_cython.pyx":982
|
|
* else:
|
|
* if not np.all(np.isnan(k_measurment)):
|
|
* raise ValueError("""Nan measurements are currently not supported if # <<<<<<<<<<<<<<
|
|
* they are intermixed with not NaN measurements""")
|
|
* else:
|
|
*/
|
|
__pyx_tuple__18 = PyTuple_Pack(1, __pyx_kp_s_Nan_measurements_are_currently_n); if (unlikely(!__pyx_tuple__18)) __PYX_ERR(0, 982, __pyx_L1_error)
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__Pyx_GOTREF(__pyx_tuple__18);
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__Pyx_GIVEREF(__pyx_tuple__18);
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/* "../../.pyenv/versions/gpy391/lib/python3.9/site-packages/numpy/__init__.pxd":947
|
|
* __pyx_import_array()
|
|
* except Exception:
|
|
* raise ImportError("numpy.core.multiarray failed to import") # <<<<<<<<<<<<<<
|
|
*
|
|
* cdef inline int import_umath() except -1:
|
|
*/
|
|
__pyx_tuple__19 = PyTuple_Pack(1, __pyx_kp_s_numpy_core_multiarray_failed_to); if (unlikely(!__pyx_tuple__19)) __PYX_ERR(2, 947, __pyx_L1_error)
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__Pyx_GOTREF(__pyx_tuple__19);
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__Pyx_GIVEREF(__pyx_tuple__19);
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/* "../../.pyenv/versions/gpy391/lib/python3.9/site-packages/numpy/__init__.pxd":953
|
|
* _import_umath()
|
|
* except Exception:
|
|
* raise ImportError("numpy.core.umath failed to import") # <<<<<<<<<<<<<<
|
|
*
|
|
* cdef inline int import_ufunc() except -1:
|
|
*/
|
|
__pyx_tuple__20 = PyTuple_Pack(1, __pyx_kp_s_numpy_core_umath_failed_to_impor); if (unlikely(!__pyx_tuple__20)) __PYX_ERR(2, 953, __pyx_L1_error)
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__Pyx_GOTREF(__pyx_tuple__20);
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__Pyx_GIVEREF(__pyx_tuple__20);
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|
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/* "GPy/models/state_space_cython.pyx":547
|
|
*
|
|
* @cython.boundscheck(False)
|
|
* def _kalman_prediction_step_SVD_Cython(long k, np.ndarray[DTYPE_t, ndim=2] p_m , tuple p_P, # <<<<<<<<<<<<<<
|
|
* Dynamic_Callables_Cython p_dynamic_callables,
|
|
* bint calc_grad_log_likelihood=False,
|
|
*/
|
|
__pyx_tuple__21 = PyTuple_Pack(31, __pyx_n_s_k, __pyx_n_s_p_m, __pyx_n_s_p_P, __pyx_n_s_p_dynamic_callables, __pyx_n_s_calc_grad_log_likelihood, __pyx_n_s_p_dm, __pyx_n_s_p_dP, __pyx_n_s_Prev_cov, __pyx_n_s_S_old, __pyx_n_s_V_old, __pyx_n_s_A, __pyx_n_s_Q, __pyx_n_s_Q_sr, __pyx_n_s_m_pred, __pyx_n_s_svd_1_matr, __pyx_n_s_res, __pyx_n_s_U, __pyx_n_s_S, __pyx_n_s_Vh, __pyx_n_s_V_new, __pyx_n_s_S_new, __pyx_n_s_P_pred, __pyx_n_s_dA_all_params, __pyx_n_s_dQ_all_params, __pyx_n_s_dm_pred, __pyx_n_s_dP_pred, __pyx_n_s_param_number, __pyx_n_s_j, __pyx_n_s_ret, __pyx_n_s_dA, __pyx_n_s_dQ); if (unlikely(!__pyx_tuple__21)) __PYX_ERR(0, 547, __pyx_L1_error)
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/* "GPy/models/state_space_cython.pyx":686
|
|
*
|
|
* @cython.boundscheck(False)
|
|
* def _kalman_update_step_SVD_Cython(long k, np.ndarray[DTYPE_t, ndim=2] p_m, tuple p_P, # <<<<<<<<<<<<<<
|
|
* Measurement_Callables_Cython p_measurement_callables,
|
|
* np.ndarray[DTYPE_t, ndim=2] measurement,
|
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*/
|
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__pyx_tuple__23 = PyTuple_Pack(52, __pyx_n_s_k, __pyx_n_s_p_m, __pyx_n_s_p_P, __pyx_n_s_p_measurement_callables, __pyx_n_s_measurement, __pyx_n_s_calc_log_likelihood, __pyx_n_s_calc_grad_log_likelihood, __pyx_n_s_p_dm, __pyx_n_s_p_dP, __pyx_n_s_m_pred, __pyx_n_s_P_pred, __pyx_n_s_S_pred, __pyx_n_s_V_pred, __pyx_n_s_H, __pyx_n_s_R, __pyx_n_s_R_isr, __pyx_n_s_time_series_no, __pyx_n_s_log_likelihood_update, __pyx_n_s_v, __pyx_n_s_svd_2_matr, __pyx_n_s_res, __pyx_n_s_U, __pyx_n_s_S_svd, __pyx_n_s_Vh, __pyx_n_s_U_upd, __pyx_n_s_S_upd, __pyx_n_s_P_upd, __pyx_n_s_S, __pyx_n_s_K, __pyx_n_s_measurement_dim_gt_one, __pyx_n_s_dm_upd, __pyx_n_s_dP_upd, __pyx_n_s_d_log_likelihood_update, __pyx_n_s_dm_pred_all_params, __pyx_n_s_dP_pred_all_params, __pyx_n_s_param_number, __pyx_n_s_dH_all_params, __pyx_n_s_dR_all_params, __pyx_n_s_param, __pyx_n_s_dH, __pyx_n_s_dR, __pyx_n_s_dm_pred, __pyx_n_s_dP_pred, __pyx_n_s_dv, __pyx_n_s_dS, __pyx_n_s_tmp1, __pyx_n_s_tmp2, __pyx_n_s_tmp3, __pyx_n_s_dK, __pyx_n_s_tmp5, __pyx_n_s_ret, __pyx_n_s_m_upd); if (unlikely(!__pyx_tuple__23)) __PYX_ERR(0, 686, __pyx_L1_error)
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__Pyx_GIVEREF(__pyx_tuple__23);
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__pyx_codeobj__24 = (PyObject*)__Pyx_PyCode_New(9, 0, 52, 0, CO_OPTIMIZED|CO_NEWLOCALS, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__23, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_GPy_models_state_space_cython_py, __pyx_n_s_kalman_update_step_SVD_Cython, 686, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__24)) __PYX_ERR(0, 686, __pyx_L1_error)
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/* "GPy/models/state_space_cython.pyx":912
|
|
*
|
|
* @cython.boundscheck(False)
|
|
* def _cont_discr_kalman_filter_raw_Cython(int state_dim, Dynamic_Callables_Cython p_dynamic_callables, # <<<<<<<<<<<<<<
|
|
* Measurement_Callables_Cython p_measurement_callables, X, Y,
|
|
* np.ndarray[DTYPE_t, ndim=2] m_init=None, np.ndarray[DTYPE_t, ndim=2] P_init=None,
|
|
*/
|
|
__pyx_tuple__25 = PyTuple_Pack(35, __pyx_n_s_state_dim, __pyx_n_s_p_dynamic_callables, __pyx_n_s_p_measurement_callables, __pyx_n_s_X, __pyx_n_s_Y, __pyx_n_s_m_init, __pyx_n_s_P_init, __pyx_n_s_p_kalman_filter_type, __pyx_n_s_calc_log_likelihood, __pyx_n_s_calc_grad_log_likelihood, __pyx_n_s_grad_params_no, __pyx_n_s_dm_init, __pyx_n_s_dP_init, __pyx_n_s_steps_no, __pyx_n_s_time_series_no, __pyx_n_s_M, __pyx_n_s_P, __pyx_n_s_U, __pyx_n_s_S, __pyx_n_s_Vh, __pyx_n_s_P_upd, __pyx_n_s_log_likelihood, __pyx_n_s_grad_log_likelihood, __pyx_n_s_dm_upd, __pyx_n_s_dP_upd, __pyx_n_s_prev_mean, __pyx_n_s_k_measurment, __pyx_n_s_m_pred, __pyx_n_s_m_upd, __pyx_n_s_P_pred, __pyx_n_s_dm_pred, __pyx_n_s_dP_pred, __pyx_n_s_log_likelihood_update, __pyx_n_s_d_log_likelihood_update, __pyx_n_s_k); if (unlikely(!__pyx_tuple__25)) __PYX_ERR(0, 912, __pyx_L1_error)
|
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__Pyx_GOTREF(__pyx_tuple__25);
|
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__Pyx_GIVEREF(__pyx_tuple__25);
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__pyx_codeobj__26 = (PyObject*)__Pyx_PyCode_New(13, 0, 35, 0, CO_OPTIMIZED|CO_NEWLOCALS, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__25, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_GPy_models_state_space_cython_py, __pyx_n_s_cont_discr_kalman_filter_raw_Cy, 912, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__26)) __PYX_ERR(0, 912, __pyx_L1_error)
|
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|
|
/* "(tree fragment)":1
|
|
* def __pyx_unpickle_Dynamic_Callables_Cython(__pyx_type, long __pyx_checksum, __pyx_state): # <<<<<<<<<<<<<<
|
|
* cdef object __pyx_PickleError
|
|
* cdef object __pyx_result
|
|
*/
|
|
__pyx_tuple__27 = PyTuple_Pack(5, __pyx_n_s_pyx_type, __pyx_n_s_pyx_checksum, __pyx_n_s_pyx_state, __pyx_n_s_pyx_PickleError, __pyx_n_s_pyx_result); if (unlikely(!__pyx_tuple__27)) __PYX_ERR(1, 1, __pyx_L1_error)
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__Pyx_GOTREF(__pyx_tuple__27);
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__Pyx_GIVEREF(__pyx_tuple__27);
|
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__pyx_codeobj__28 = (PyObject*)__Pyx_PyCode_New(3, 0, 5, 0, CO_OPTIMIZED|CO_NEWLOCALS, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__27, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_stringsource, __pyx_n_s_pyx_unpickle_Dynamic_Callables, 1, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__28)) __PYX_ERR(1, 1, __pyx_L1_error)
|
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__pyx_tuple__29 = PyTuple_Pack(5, __pyx_n_s_pyx_type, __pyx_n_s_pyx_checksum, __pyx_n_s_pyx_state, __pyx_n_s_pyx_PickleError, __pyx_n_s_pyx_result); if (unlikely(!__pyx_tuple__29)) __PYX_ERR(1, 1, __pyx_L1_error)
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__Pyx_GOTREF(__pyx_tuple__29);
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__Pyx_GIVEREF(__pyx_tuple__29);
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__pyx_codeobj__30 = (PyObject*)__Pyx_PyCode_New(3, 0, 5, 0, CO_OPTIMIZED|CO_NEWLOCALS, __pyx_empty_bytes, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_tuple__29, __pyx_empty_tuple, __pyx_empty_tuple, __pyx_kp_s_stringsource, __pyx_n_s_pyx_unpickle_Measurement_Calla, 1, __pyx_empty_bytes); if (unlikely(!__pyx_codeobj__30)) __PYX_ERR(1, 1, __pyx_L1_error)
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__pyx_tuple__31 = PyTuple_Pack(5, __pyx_n_s_pyx_type, __pyx_n_s_pyx_checksum, __pyx_n_s_pyx_state, __pyx_n_s_pyx_PickleError, __pyx_n_s_pyx_result); if (unlikely(!__pyx_tuple__31)) __PYX_ERR(1, 1, __pyx_L1_error)
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__Pyx_GOTREF(__pyx_tuple__31);
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__Pyx_GIVEREF(__pyx_tuple__31);
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|
|
case 'g': return sizeof(__Pyx_st_longdouble) - sizeof(long double);
|
|
case 'P': case 'O': return sizeof(__Pyx_st_void_p) - sizeof(void*);
|
|
default:
|
|
__Pyx_BufFmt_RaiseUnexpectedChar(ch);
|
|
return 0;
|
|
}
|
|
}
|
|
/* These are for computing the padding at the end of the struct to align
|
|
on the first member of the struct. This will probably the same as above,
|
|
but we don't have any guarantees.
|
|
*/
|
|
typedef struct { short x; char c; } __Pyx_pad_short;
|
|
typedef struct { int x; char c; } __Pyx_pad_int;
|
|
typedef struct { long x; char c; } __Pyx_pad_long;
|
|
typedef struct { float x; char c; } __Pyx_pad_float;
|
|
typedef struct { double x; char c; } __Pyx_pad_double;
|
|
typedef struct { long double x; char c; } __Pyx_pad_longdouble;
|
|
typedef struct { void *x; char c; } __Pyx_pad_void_p;
|
|
#ifdef HAVE_LONG_LONG
|
|
typedef struct { PY_LONG_LONG x; char c; } __Pyx_pad_longlong;
|
|
#endif
|
|
static size_t __Pyx_BufFmt_TypeCharToPadding(char ch, CYTHON_UNUSED int is_complex) {
|
|
switch (ch) {
|
|
case '?': case 'c': case 'b': case 'B': case 's': case 'p': return 1;
|
|
case 'h': case 'H': return sizeof(__Pyx_pad_short) - sizeof(short);
|
|
case 'i': case 'I': return sizeof(__Pyx_pad_int) - sizeof(int);
|
|
case 'l': case 'L': return sizeof(__Pyx_pad_long) - sizeof(long);
|
|
#ifdef HAVE_LONG_LONG
|
|
case 'q': case 'Q': return sizeof(__Pyx_pad_longlong) - sizeof(PY_LONG_LONG);
|
|
#endif
|
|
case 'f': return sizeof(__Pyx_pad_float) - sizeof(float);
|
|
case 'd': return sizeof(__Pyx_pad_double) - sizeof(double);
|
|
case 'g': return sizeof(__Pyx_pad_longdouble) - sizeof(long double);
|
|
case 'P': case 'O': return sizeof(__Pyx_pad_void_p) - sizeof(void*);
|
|
default:
|
|
__Pyx_BufFmt_RaiseUnexpectedChar(ch);
|
|
return 0;
|
|
}
|
|
}
|
|
static char __Pyx_BufFmt_TypeCharToGroup(char ch, int is_complex) {
|
|
switch (ch) {
|
|
case 'c':
|
|
return 'H';
|
|
case 'b': case 'h': case 'i':
|
|
case 'l': case 'q': case 's': case 'p':
|
|
return 'I';
|
|
case '?': case 'B': case 'H': case 'I': case 'L': case 'Q':
|
|
return 'U';
|
|
case 'f': case 'd': case 'g':
|
|
return (is_complex ? 'C' : 'R');
|
|
case 'O':
|
|
return 'O';
|
|
case 'P':
|
|
return 'P';
|
|
default: {
|
|
__Pyx_BufFmt_RaiseUnexpectedChar(ch);
|
|
return 0;
|
|
}
|
|
}
|
|
}
|
|
static void __Pyx_BufFmt_RaiseExpected(__Pyx_BufFmt_Context* ctx) {
|
|
if (ctx->head == NULL || ctx->head->field == &ctx->root) {
|
|
const char* expected;
|
|
const char* quote;
|
|
if (ctx->head == NULL) {
|
|
expected = "end";
|
|
quote = "";
|
|
} else {
|
|
expected = ctx->head->field->type->name;
|
|
quote = "'";
|
|
}
|
|
PyErr_Format(PyExc_ValueError,
|
|
"Buffer dtype mismatch, expected %s%s%s but got %s",
|
|
quote, expected, quote,
|
|
__Pyx_BufFmt_DescribeTypeChar(ctx->enc_type, ctx->is_complex));
|
|
} else {
|
|
__Pyx_StructField* field = ctx->head->field;
|
|
__Pyx_StructField* parent = (ctx->head - 1)->field;
|
|
PyErr_Format(PyExc_ValueError,
|
|
"Buffer dtype mismatch, expected '%s' but got %s in '%s.%s'",
|
|
field->type->name, __Pyx_BufFmt_DescribeTypeChar(ctx->enc_type, ctx->is_complex),
|
|
parent->type->name, field->name);
|
|
}
|
|
}
|
|
static int __Pyx_BufFmt_ProcessTypeChunk(__Pyx_BufFmt_Context* ctx) {
|
|
char group;
|
|
size_t size, offset, arraysize = 1;
|
|
if (ctx->enc_type == 0) return 0;
|
|
if (ctx->head->field->type->arraysize[0]) {
|
|
int i, ndim = 0;
|
|
if (ctx->enc_type == 's' || ctx->enc_type == 'p') {
|
|
ctx->is_valid_array = ctx->head->field->type->ndim == 1;
|
|
ndim = 1;
|
|
if (ctx->enc_count != ctx->head->field->type->arraysize[0]) {
|
|
PyErr_Format(PyExc_ValueError,
|
|
"Expected a dimension of size %zu, got %zu",
|
|
ctx->head->field->type->arraysize[0], ctx->enc_count);
|
|
return -1;
|
|
}
|
|
}
|
|
if (!ctx->is_valid_array) {
|
|
PyErr_Format(PyExc_ValueError, "Expected %d dimensions, got %d",
|
|
ctx->head->field->type->ndim, ndim);
|
|
return -1;
|
|
}
|
|
for (i = 0; i < ctx->head->field->type->ndim; i++) {
|
|
arraysize *= ctx->head->field->type->arraysize[i];
|
|
}
|
|
ctx->is_valid_array = 0;
|
|
ctx->enc_count = 1;
|
|
}
|
|
group = __Pyx_BufFmt_TypeCharToGroup(ctx->enc_type, ctx->is_complex);
|
|
do {
|
|
__Pyx_StructField* field = ctx->head->field;
|
|
__Pyx_TypeInfo* type = field->type;
|
|
if (ctx->enc_packmode == '@' || ctx->enc_packmode == '^') {
|
|
size = __Pyx_BufFmt_TypeCharToNativeSize(ctx->enc_type, ctx->is_complex);
|
|
} else {
|
|
size = __Pyx_BufFmt_TypeCharToStandardSize(ctx->enc_type, ctx->is_complex);
|
|
}
|
|
if (ctx->enc_packmode == '@') {
|
|
size_t align_at = __Pyx_BufFmt_TypeCharToAlignment(ctx->enc_type, ctx->is_complex);
|
|
size_t align_mod_offset;
|
|
if (align_at == 0) return -1;
|
|
align_mod_offset = ctx->fmt_offset % align_at;
|
|
if (align_mod_offset > 0) ctx->fmt_offset += align_at - align_mod_offset;
|
|
if (ctx->struct_alignment == 0)
|
|
ctx->struct_alignment = __Pyx_BufFmt_TypeCharToPadding(ctx->enc_type,
|
|
ctx->is_complex);
|
|
}
|
|
if (type->size != size || type->typegroup != group) {
|
|
if (type->typegroup == 'C' && type->fields != NULL) {
|
|
size_t parent_offset = ctx->head->parent_offset + field->offset;
|
|
++ctx->head;
|
|
ctx->head->field = type->fields;
|
|
ctx->head->parent_offset = parent_offset;
|
|
continue;
|
|
}
|
|
if ((type->typegroup == 'H' || group == 'H') && type->size == size) {
|
|
} else {
|
|
__Pyx_BufFmt_RaiseExpected(ctx);
|
|
return -1;
|
|
}
|
|
}
|
|
offset = ctx->head->parent_offset + field->offset;
|
|
if (ctx->fmt_offset != offset) {
|
|
PyErr_Format(PyExc_ValueError,
|
|
"Buffer dtype mismatch; next field is at offset %" CYTHON_FORMAT_SSIZE_T "d but %" CYTHON_FORMAT_SSIZE_T "d expected",
|
|
(Py_ssize_t)ctx->fmt_offset, (Py_ssize_t)offset);
|
|
return -1;
|
|
}
|
|
ctx->fmt_offset += size;
|
|
if (arraysize)
|
|
ctx->fmt_offset += (arraysize - 1) * size;
|
|
--ctx->enc_count;
|
|
while (1) {
|
|
if (field == &ctx->root) {
|
|
ctx->head = NULL;
|
|
if (ctx->enc_count != 0) {
|
|
__Pyx_BufFmt_RaiseExpected(ctx);
|
|
return -1;
|
|
}
|
|
break;
|
|
}
|
|
ctx->head->field = ++field;
|
|
if (field->type == NULL) {
|
|
--ctx->head;
|
|
field = ctx->head->field;
|
|
continue;
|
|
} else if (field->type->typegroup == 'S') {
|
|
size_t parent_offset = ctx->head->parent_offset + field->offset;
|
|
if (field->type->fields->type == NULL) continue;
|
|
field = field->type->fields;
|
|
++ctx->head;
|
|
ctx->head->field = field;
|
|
ctx->head->parent_offset = parent_offset;
|
|
break;
|
|
} else {
|
|
break;
|
|
}
|
|
}
|
|
} while (ctx->enc_count);
|
|
ctx->enc_type = 0;
|
|
ctx->is_complex = 0;
|
|
return 0;
|
|
}
|
|
static PyObject *
|
|
__pyx_buffmt_parse_array(__Pyx_BufFmt_Context* ctx, const char** tsp)
|
|
{
|
|
const char *ts = *tsp;
|
|
int i = 0, number, ndim;
|
|
++ts;
|
|
if (ctx->new_count != 1) {
|
|
PyErr_SetString(PyExc_ValueError,
|
|
"Cannot handle repeated arrays in format string");
|
|
return NULL;
|
|
}
|
|
if (__Pyx_BufFmt_ProcessTypeChunk(ctx) == -1) return NULL;
|
|
ndim = ctx->head->field->type->ndim;
|
|
while (*ts && *ts != ')') {
|
|
switch (*ts) {
|
|
case ' ': case '\f': case '\r': case '\n': case '\t': case '\v': continue;
|
|
default: break;
|
|
}
|
|
number = __Pyx_BufFmt_ExpectNumber(&ts);
|
|
if (number == -1) return NULL;
|
|
if (i < ndim && (size_t) number != ctx->head->field->type->arraysize[i])
|
|
return PyErr_Format(PyExc_ValueError,
|
|
"Expected a dimension of size %zu, got %d",
|
|
ctx->head->field->type->arraysize[i], number);
|
|
if (*ts != ',' && *ts != ')')
|
|
return PyErr_Format(PyExc_ValueError,
|
|
"Expected a comma in format string, got '%c'", *ts);
|
|
if (*ts == ',') ts++;
|
|
i++;
|
|
}
|
|
if (i != ndim)
|
|
return PyErr_Format(PyExc_ValueError, "Expected %d dimension(s), got %d",
|
|
ctx->head->field->type->ndim, i);
|
|
if (!*ts) {
|
|
PyErr_SetString(PyExc_ValueError,
|
|
"Unexpected end of format string, expected ')'");
|
|
return NULL;
|
|
}
|
|
ctx->is_valid_array = 1;
|
|
ctx->new_count = 1;
|
|
*tsp = ++ts;
|
|
return Py_None;
|
|
}
|
|
static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const char* ts) {
|
|
int got_Z = 0;
|
|
while (1) {
|
|
switch(*ts) {
|
|
case 0:
|
|
if (ctx->enc_type != 0 && ctx->head == NULL) {
|
|
__Pyx_BufFmt_RaiseExpected(ctx);
|
|
return NULL;
|
|
}
|
|
if (__Pyx_BufFmt_ProcessTypeChunk(ctx) == -1) return NULL;
|
|
if (ctx->head != NULL) {
|
|
__Pyx_BufFmt_RaiseExpected(ctx);
|
|
return NULL;
|
|
}
|
|
return ts;
|
|
case ' ':
|
|
case '\r':
|
|
case '\n':
|
|
++ts;
|
|
break;
|
|
case '<':
|
|
if (!__Pyx_Is_Little_Endian()) {
|
|
PyErr_SetString(PyExc_ValueError, "Little-endian buffer not supported on big-endian compiler");
|
|
return NULL;
|
|
}
|
|
ctx->new_packmode = '=';
|
|
++ts;
|
|
break;
|
|
case '>':
|
|
case '!':
|
|
if (__Pyx_Is_Little_Endian()) {
|
|
PyErr_SetString(PyExc_ValueError, "Big-endian buffer not supported on little-endian compiler");
|
|
return NULL;
|
|
}
|
|
ctx->new_packmode = '=';
|
|
++ts;
|
|
break;
|
|
case '=':
|
|
case '@':
|
|
case '^':
|
|
ctx->new_packmode = *ts++;
|
|
break;
|
|
case 'T':
|
|
{
|
|
const char* ts_after_sub;
|
|
size_t i, struct_count = ctx->new_count;
|
|
size_t struct_alignment = ctx->struct_alignment;
|
|
ctx->new_count = 1;
|
|
++ts;
|
|
if (*ts != '{') {
|
|
PyErr_SetString(PyExc_ValueError, "Buffer acquisition: Expected '{' after 'T'");
|
|
return NULL;
|
|
}
|
|
if (__Pyx_BufFmt_ProcessTypeChunk(ctx) == -1) return NULL;
|
|
ctx->enc_type = 0;
|
|
ctx->enc_count = 0;
|
|
ctx->struct_alignment = 0;
|
|
++ts;
|
|
ts_after_sub = ts;
|
|
for (i = 0; i != struct_count; ++i) {
|
|
ts_after_sub = __Pyx_BufFmt_CheckString(ctx, ts);
|
|
if (!ts_after_sub) return NULL;
|
|
}
|
|
ts = ts_after_sub;
|
|
if (struct_alignment) ctx->struct_alignment = struct_alignment;
|
|
}
|
|
break;
|
|
case '}':
|
|
{
|
|
size_t alignment = ctx->struct_alignment;
|
|
++ts;
|
|
if (__Pyx_BufFmt_ProcessTypeChunk(ctx) == -1) return NULL;
|
|
ctx->enc_type = 0;
|
|
if (alignment && ctx->fmt_offset % alignment) {
|
|
ctx->fmt_offset += alignment - (ctx->fmt_offset % alignment);
|
|
}
|
|
}
|
|
return ts;
|
|
case 'x':
|
|
if (__Pyx_BufFmt_ProcessTypeChunk(ctx) == -1) return NULL;
|
|
ctx->fmt_offset += ctx->new_count;
|
|
ctx->new_count = 1;
|
|
ctx->enc_count = 0;
|
|
ctx->enc_type = 0;
|
|
ctx->enc_packmode = ctx->new_packmode;
|
|
++ts;
|
|
break;
|
|
case 'Z':
|
|
got_Z = 1;
|
|
++ts;
|
|
if (*ts != 'f' && *ts != 'd' && *ts != 'g') {
|
|
__Pyx_BufFmt_RaiseUnexpectedChar('Z');
|
|
return NULL;
|
|
}
|
|
CYTHON_FALLTHROUGH;
|
|
case '?': case 'c': case 'b': case 'B': case 'h': case 'H': case 'i': case 'I':
|
|
case 'l': case 'L': case 'q': case 'Q':
|
|
case 'f': case 'd': case 'g':
|
|
case 'O': case 'p':
|
|
if ((ctx->enc_type == *ts) && (got_Z == ctx->is_complex) &&
|
|
(ctx->enc_packmode == ctx->new_packmode) && (!ctx->is_valid_array)) {
|
|
ctx->enc_count += ctx->new_count;
|
|
ctx->new_count = 1;
|
|
got_Z = 0;
|
|
++ts;
|
|
break;
|
|
}
|
|
CYTHON_FALLTHROUGH;
|
|
case 's':
|
|
if (__Pyx_BufFmt_ProcessTypeChunk(ctx) == -1) return NULL;
|
|
ctx->enc_count = ctx->new_count;
|
|
ctx->enc_packmode = ctx->new_packmode;
|
|
ctx->enc_type = *ts;
|
|
ctx->is_complex = got_Z;
|
|
++ts;
|
|
ctx->new_count = 1;
|
|
got_Z = 0;
|
|
break;
|
|
case ':':
|
|
++ts;
|
|
while(*ts != ':') ++ts;
|
|
++ts;
|
|
break;
|
|
case '(':
|
|
if (!__pyx_buffmt_parse_array(ctx, &ts)) return NULL;
|
|
break;
|
|
default:
|
|
{
|
|
int number = __Pyx_BufFmt_ExpectNumber(&ts);
|
|
if (number == -1) return NULL;
|
|
ctx->new_count = (size_t)number;
|
|
}
|
|
}
|
|
}
|
|
}
|
|
|
|
/* BufferGetAndValidate */
|
|
static CYTHON_INLINE void __Pyx_SafeReleaseBuffer(Py_buffer* info) {
|
|
if (unlikely(info->buf == NULL)) return;
|
|
if (info->suboffsets == __Pyx_minusones) info->suboffsets = NULL;
|
|
__Pyx_ReleaseBuffer(info);
|
|
}
|
|
static void __Pyx_ZeroBuffer(Py_buffer* buf) {
|
|
buf->buf = NULL;
|
|
buf->obj = NULL;
|
|
buf->strides = __Pyx_zeros;
|
|
buf->shape = __Pyx_zeros;
|
|
buf->suboffsets = __Pyx_minusones;
|
|
}
|
|
static int __Pyx__GetBufferAndValidate(
|
|
Py_buffer* buf, PyObject* obj, __Pyx_TypeInfo* dtype, int flags,
|
|
int nd, int cast, __Pyx_BufFmt_StackElem* stack)
|
|
{
|
|
buf->buf = NULL;
|
|
if (unlikely(__Pyx_GetBuffer(obj, buf, flags) == -1)) {
|
|
__Pyx_ZeroBuffer(buf);
|
|
return -1;
|
|
}
|
|
if (unlikely(buf->ndim != nd)) {
|
|
PyErr_Format(PyExc_ValueError,
|
|
"Buffer has wrong number of dimensions (expected %d, got %d)",
|
|
nd, buf->ndim);
|
|
goto fail;
|
|
}
|
|
if (!cast) {
|
|
__Pyx_BufFmt_Context ctx;
|
|
__Pyx_BufFmt_Init(&ctx, stack, dtype);
|
|
if (!__Pyx_BufFmt_CheckString(&ctx, buf->format)) goto fail;
|
|
}
|
|
if (unlikely((size_t)buf->itemsize != dtype->size)) {
|
|
PyErr_Format(PyExc_ValueError,
|
|
"Item size of buffer (%" CYTHON_FORMAT_SSIZE_T "d byte%s) does not match size of '%s' (%" CYTHON_FORMAT_SSIZE_T "d byte%s)",
|
|
buf->itemsize, (buf->itemsize > 1) ? "s" : "",
|
|
dtype->name, (Py_ssize_t)dtype->size, (dtype->size > 1) ? "s" : "");
|
|
goto fail;
|
|
}
|
|
if (buf->suboffsets == NULL) buf->suboffsets = __Pyx_minusones;
|
|
return 0;
|
|
fail:;
|
|
__Pyx_SafeReleaseBuffer(buf);
|
|
return -1;
|
|
}
|
|
|
|
/* PyDictVersioning */
|
|
#if CYTHON_USE_DICT_VERSIONS && CYTHON_USE_TYPE_SLOTS
|
|
static CYTHON_INLINE PY_UINT64_T __Pyx_get_tp_dict_version(PyObject *obj) {
|
|
PyObject *dict = Py_TYPE(obj)->tp_dict;
|
|
return likely(dict) ? __PYX_GET_DICT_VERSION(dict) : 0;
|
|
}
|
|
static CYTHON_INLINE PY_UINT64_T __Pyx_get_object_dict_version(PyObject *obj) {
|
|
PyObject **dictptr = NULL;
|
|
Py_ssize_t offset = Py_TYPE(obj)->tp_dictoffset;
|
|
if (offset) {
|
|
#if CYTHON_COMPILING_IN_CPYTHON
|
|
dictptr = (likely(offset > 0)) ? (PyObject **) ((char *)obj + offset) : _PyObject_GetDictPtr(obj);
|
|
#else
|
|
dictptr = _PyObject_GetDictPtr(obj);
|
|
#endif
|
|
}
|
|
return (dictptr && *dictptr) ? __PYX_GET_DICT_VERSION(*dictptr) : 0;
|
|
}
|
|
static CYTHON_INLINE int __Pyx_object_dict_version_matches(PyObject* obj, PY_UINT64_T tp_dict_version, PY_UINT64_T obj_dict_version) {
|
|
PyObject *dict = Py_TYPE(obj)->tp_dict;
|
|
if (unlikely(!dict) || unlikely(tp_dict_version != __PYX_GET_DICT_VERSION(dict)))
|
|
return 0;
|
|
return obj_dict_version == __Pyx_get_object_dict_version(obj);
|
|
}
|
|
#endif
|
|
|
|
/* PyFunctionFastCall */
|
|
#if CYTHON_FAST_PYCALL
|
|
static PyObject* __Pyx_PyFunction_FastCallNoKw(PyCodeObject *co, PyObject **args, Py_ssize_t na,
|
|
PyObject *globals) {
|
|
PyFrameObject *f;
|
|
PyThreadState *tstate = __Pyx_PyThreadState_Current;
|
|
PyObject **fastlocals;
|
|
Py_ssize_t i;
|
|
PyObject *result;
|
|
assert(globals != NULL);
|
|
/* XXX Perhaps we should create a specialized
|
|
PyFrame_New() that doesn't take locals, but does
|
|
take builtins without sanity checking them.
|
|
*/
|
|
assert(tstate != NULL);
|
|
f = PyFrame_New(tstate, co, globals, NULL);
|
|
if (f == NULL) {
|
|
return NULL;
|
|
}
|
|
fastlocals = __Pyx_PyFrame_GetLocalsplus(f);
|
|
for (i = 0; i < na; i++) {
|
|
Py_INCREF(*args);
|
|
fastlocals[i] = *args++;
|
|
}
|
|
result = PyEval_EvalFrameEx(f,0);
|
|
++tstate->recursion_depth;
|
|
Py_DECREF(f);
|
|
--tstate->recursion_depth;
|
|
return result;
|
|
}
|
|
#if 1 || PY_VERSION_HEX < 0x030600B1
|
|
static PyObject *__Pyx_PyFunction_FastCallDict(PyObject *func, PyObject **args, Py_ssize_t nargs, PyObject *kwargs) {
|
|
PyCodeObject *co = (PyCodeObject *)PyFunction_GET_CODE(func);
|
|
PyObject *globals = PyFunction_GET_GLOBALS(func);
|
|
PyObject *argdefs = PyFunction_GET_DEFAULTS(func);
|
|
PyObject *closure;
|
|
#if PY_MAJOR_VERSION >= 3
|
|
PyObject *kwdefs;
|
|
#endif
|
|
PyObject *kwtuple, **k;
|
|
PyObject **d;
|
|
Py_ssize_t nd;
|
|
Py_ssize_t nk;
|
|
PyObject *result;
|
|
assert(kwargs == NULL || PyDict_Check(kwargs));
|
|
nk = kwargs ? PyDict_Size(kwargs) : 0;
|
|
if (Py_EnterRecursiveCall((char*)" while calling a Python object")) {
|
|
return NULL;
|
|
}
|
|
if (
|
|
#if PY_MAJOR_VERSION >= 3
|
|
co->co_kwonlyargcount == 0 &&
|
|
#endif
|
|
likely(kwargs == NULL || nk == 0) &&
|
|
co->co_flags == (CO_OPTIMIZED | CO_NEWLOCALS | CO_NOFREE)) {
|
|
if (argdefs == NULL && co->co_argcount == nargs) {
|
|
result = __Pyx_PyFunction_FastCallNoKw(co, args, nargs, globals);
|
|
goto done;
|
|
}
|
|
else if (nargs == 0 && argdefs != NULL
|
|
&& co->co_argcount == Py_SIZE(argdefs)) {
|
|
/* function called with no arguments, but all parameters have
|
|
a default value: use default values as arguments .*/
|
|
args = &PyTuple_GET_ITEM(argdefs, 0);
|
|
result =__Pyx_PyFunction_FastCallNoKw(co, args, Py_SIZE(argdefs), globals);
|
|
goto done;
|
|
}
|
|
}
|
|
if (kwargs != NULL) {
|
|
Py_ssize_t pos, i;
|
|
kwtuple = PyTuple_New(2 * nk);
|
|
if (kwtuple == NULL) {
|
|
result = NULL;
|
|
goto done;
|
|
}
|
|
k = &PyTuple_GET_ITEM(kwtuple, 0);
|
|
pos = i = 0;
|
|
while (PyDict_Next(kwargs, &pos, &k[i], &k[i+1])) {
|
|
Py_INCREF(k[i]);
|
|
Py_INCREF(k[i+1]);
|
|
i += 2;
|
|
}
|
|
nk = i / 2;
|
|
}
|
|
else {
|
|
kwtuple = NULL;
|
|
k = NULL;
|
|
}
|
|
closure = PyFunction_GET_CLOSURE(func);
|
|
#if PY_MAJOR_VERSION >= 3
|
|
kwdefs = PyFunction_GET_KW_DEFAULTS(func);
|
|
#endif
|
|
if (argdefs != NULL) {
|
|
d = &PyTuple_GET_ITEM(argdefs, 0);
|
|
nd = Py_SIZE(argdefs);
|
|
}
|
|
else {
|
|
d = NULL;
|
|
nd = 0;
|
|
}
|
|
#if PY_MAJOR_VERSION >= 3
|
|
result = PyEval_EvalCodeEx((PyObject*)co, globals, (PyObject *)NULL,
|
|
args, (int)nargs,
|
|
k, (int)nk,
|
|
d, (int)nd, kwdefs, closure);
|
|
#else
|
|
result = PyEval_EvalCodeEx(co, globals, (PyObject *)NULL,
|
|
args, (int)nargs,
|
|
k, (int)nk,
|
|
d, (int)nd, closure);
|
|
#endif
|
|
Py_XDECREF(kwtuple);
|
|
done:
|
|
Py_LeaveRecursiveCall();
|
|
return result;
|
|
}
|
|
#endif
|
|
#endif
|
|
|
|
/* PyCFunctionFastCall */
|
|
#if CYTHON_FAST_PYCCALL
|
|
static CYTHON_INLINE PyObject * __Pyx_PyCFunction_FastCall(PyObject *func_obj, PyObject **args, Py_ssize_t nargs) {
|
|
PyCFunctionObject *func = (PyCFunctionObject*)func_obj;
|
|
PyCFunction meth = PyCFunction_GET_FUNCTION(func);
|
|
PyObject *self = PyCFunction_GET_SELF(func);
|
|
int flags = PyCFunction_GET_FLAGS(func);
|
|
assert(PyCFunction_Check(func));
|
|
assert(METH_FASTCALL == (flags & ~(METH_CLASS | METH_STATIC | METH_COEXIST | METH_KEYWORDS | METH_STACKLESS)));
|
|
assert(nargs >= 0);
|
|
assert(nargs == 0 || args != NULL);
|
|
/* _PyCFunction_FastCallDict() must not be called with an exception set,
|
|
because it may clear it (directly or indirectly) and so the
|
|
caller loses its exception */
|
|
assert(!PyErr_Occurred());
|
|
if ((PY_VERSION_HEX < 0x030700A0) || unlikely(flags & METH_KEYWORDS)) {
|
|
return (*((__Pyx_PyCFunctionFastWithKeywords)(void*)meth)) (self, args, nargs, NULL);
|
|
} else {
|
|
return (*((__Pyx_PyCFunctionFast)(void*)meth)) (self, args, nargs);
|
|
}
|
|
}
|
|
#endif
|
|
|
|
/* PyObjectCall */
|
|
#if CYTHON_COMPILING_IN_CPYTHON
|
|
static CYTHON_INLINE PyObject* __Pyx_PyObject_Call(PyObject *func, PyObject *arg, PyObject *kw) {
|
|
PyObject *result;
|
|
ternaryfunc call = func->ob_type->tp_call;
|
|
if (unlikely(!call))
|
|
return PyObject_Call(func, arg, kw);
|
|
if (unlikely(Py_EnterRecursiveCall((char*)" while calling a Python object")))
|
|
return NULL;
|
|
result = (*call)(func, arg, kw);
|
|
Py_LeaveRecursiveCall();
|
|
if (unlikely(!result) && unlikely(!PyErr_Occurred())) {
|
|
PyErr_SetString(
|
|
PyExc_SystemError,
|
|
"NULL result without error in PyObject_Call");
|
|
}
|
|
return result;
|
|
}
|
|
#endif
|
|
|
|
/* PyErrFetchRestore */
|
|
#if CYTHON_FAST_THREAD_STATE
|
|
static CYTHON_INLINE void __Pyx_ErrRestoreInState(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb) {
|
|
PyObject *tmp_type, *tmp_value, *tmp_tb;
|
|
tmp_type = tstate->curexc_type;
|
|
tmp_value = tstate->curexc_value;
|
|
tmp_tb = tstate->curexc_traceback;
|
|
tstate->curexc_type = type;
|
|
tstate->curexc_value = value;
|
|
tstate->curexc_traceback = tb;
|
|
Py_XDECREF(tmp_type);
|
|
Py_XDECREF(tmp_value);
|
|
Py_XDECREF(tmp_tb);
|
|
}
|
|
static CYTHON_INLINE void __Pyx_ErrFetchInState(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb) {
|
|
*type = tstate->curexc_type;
|
|
*value = tstate->curexc_value;
|
|
*tb = tstate->curexc_traceback;
|
|
tstate->curexc_type = 0;
|
|
tstate->curexc_value = 0;
|
|
tstate->curexc_traceback = 0;
|
|
}
|
|
#endif
|
|
|
|
/* RaiseException */
|
|
#if PY_MAJOR_VERSION < 3
|
|
static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb,
|
|
CYTHON_UNUSED PyObject *cause) {
|
|
__Pyx_PyThreadState_declare
|
|
Py_XINCREF(type);
|
|
if (!value || value == Py_None)
|
|
value = NULL;
|
|
else
|
|
Py_INCREF(value);
|
|
if (!tb || tb == Py_None)
|
|
tb = NULL;
|
|
else {
|
|
Py_INCREF(tb);
|
|
if (!PyTraceBack_Check(tb)) {
|
|
PyErr_SetString(PyExc_TypeError,
|
|
"raise: arg 3 must be a traceback or None");
|
|
goto raise_error;
|
|
}
|
|
}
|
|
if (PyType_Check(type)) {
|
|
#if CYTHON_COMPILING_IN_PYPY
|
|
if (!value) {
|
|
Py_INCREF(Py_None);
|
|
value = Py_None;
|
|
}
|
|
#endif
|
|
PyErr_NormalizeException(&type, &value, &tb);
|
|
} else {
|
|
if (value) {
|
|
PyErr_SetString(PyExc_TypeError,
|
|
"instance exception may not have a separate value");
|
|
goto raise_error;
|
|
}
|
|
value = type;
|
|
type = (PyObject*) Py_TYPE(type);
|
|
Py_INCREF(type);
|
|
if (!PyType_IsSubtype((PyTypeObject *)type, (PyTypeObject *)PyExc_BaseException)) {
|
|
PyErr_SetString(PyExc_TypeError,
|
|
"raise: exception class must be a subclass of BaseException");
|
|
goto raise_error;
|
|
}
|
|
}
|
|
__Pyx_PyThreadState_assign
|
|
__Pyx_ErrRestore(type, value, tb);
|
|
return;
|
|
raise_error:
|
|
Py_XDECREF(value);
|
|
Py_XDECREF(type);
|
|
Py_XDECREF(tb);
|
|
return;
|
|
}
|
|
#else
|
|
static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause) {
|
|
PyObject* owned_instance = NULL;
|
|
if (tb == Py_None) {
|
|
tb = 0;
|
|
} else if (tb && !PyTraceBack_Check(tb)) {
|
|
PyErr_SetString(PyExc_TypeError,
|
|
"raise: arg 3 must be a traceback or None");
|
|
goto bad;
|
|
}
|
|
if (value == Py_None)
|
|
value = 0;
|
|
if (PyExceptionInstance_Check(type)) {
|
|
if (value) {
|
|
PyErr_SetString(PyExc_TypeError,
|
|
"instance exception may not have a separate value");
|
|
goto bad;
|
|
}
|
|
value = type;
|
|
type = (PyObject*) Py_TYPE(value);
|
|
} else if (PyExceptionClass_Check(type)) {
|
|
PyObject *instance_class = NULL;
|
|
if (value && PyExceptionInstance_Check(value)) {
|
|
instance_class = (PyObject*) Py_TYPE(value);
|
|
if (instance_class != type) {
|
|
int is_subclass = PyObject_IsSubclass(instance_class, type);
|
|
if (!is_subclass) {
|
|
instance_class = NULL;
|
|
} else if (unlikely(is_subclass == -1)) {
|
|
goto bad;
|
|
} else {
|
|
type = instance_class;
|
|
}
|
|
}
|
|
}
|
|
if (!instance_class) {
|
|
PyObject *args;
|
|
if (!value)
|
|
args = PyTuple_New(0);
|
|
else if (PyTuple_Check(value)) {
|
|
Py_INCREF(value);
|
|
args = value;
|
|
} else
|
|
args = PyTuple_Pack(1, value);
|
|
if (!args)
|
|
goto bad;
|
|
owned_instance = PyObject_Call(type, args, NULL);
|
|
Py_DECREF(args);
|
|
if (!owned_instance)
|
|
goto bad;
|
|
value = owned_instance;
|
|
if (!PyExceptionInstance_Check(value)) {
|
|
PyErr_Format(PyExc_TypeError,
|
|
"calling %R should have returned an instance of "
|
|
"BaseException, not %R",
|
|
type, Py_TYPE(value));
|
|
goto bad;
|
|
}
|
|
}
|
|
} else {
|
|
PyErr_SetString(PyExc_TypeError,
|
|
"raise: exception class must be a subclass of BaseException");
|
|
goto bad;
|
|
}
|
|
if (cause) {
|
|
PyObject *fixed_cause;
|
|
if (cause == Py_None) {
|
|
fixed_cause = NULL;
|
|
} else if (PyExceptionClass_Check(cause)) {
|
|
fixed_cause = PyObject_CallObject(cause, NULL);
|
|
if (fixed_cause == NULL)
|
|
goto bad;
|
|
} else if (PyExceptionInstance_Check(cause)) {
|
|
fixed_cause = cause;
|
|
Py_INCREF(fixed_cause);
|
|
} else {
|
|
PyErr_SetString(PyExc_TypeError,
|
|
"exception causes must derive from "
|
|
"BaseException");
|
|
goto bad;
|
|
}
|
|
PyException_SetCause(value, fixed_cause);
|
|
}
|
|
PyErr_SetObject(type, value);
|
|
if (tb) {
|
|
#if CYTHON_COMPILING_IN_PYPY
|
|
PyObject *tmp_type, *tmp_value, *tmp_tb;
|
|
PyErr_Fetch(&tmp_type, &tmp_value, &tmp_tb);
|
|
Py_INCREF(tb);
|
|
PyErr_Restore(tmp_type, tmp_value, tb);
|
|
Py_XDECREF(tmp_tb);
|
|
#else
|
|
PyThreadState *tstate = __Pyx_PyThreadState_Current;
|
|
PyObject* tmp_tb = tstate->curexc_traceback;
|
|
if (tb != tmp_tb) {
|
|
Py_INCREF(tb);
|
|
tstate->curexc_traceback = tb;
|
|
Py_XDECREF(tmp_tb);
|
|
}
|
|
#endif
|
|
}
|
|
bad:
|
|
Py_XDECREF(owned_instance);
|
|
return;
|
|
}
|
|
#endif
|
|
|
|
/* RaiseArgTupleInvalid */
|
|
static void __Pyx_RaiseArgtupleInvalid(
|
|
const char* func_name,
|
|
int exact,
|
|
Py_ssize_t num_min,
|
|
Py_ssize_t num_max,
|
|
Py_ssize_t num_found)
|
|
{
|
|
Py_ssize_t num_expected;
|
|
const char *more_or_less;
|
|
if (num_found < num_min) {
|
|
num_expected = num_min;
|
|
more_or_less = "at least";
|
|
} else {
|
|
num_expected = num_max;
|
|
more_or_less = "at most";
|
|
}
|
|
if (exact) {
|
|
more_or_less = "exactly";
|
|
}
|
|
PyErr_Format(PyExc_TypeError,
|
|
"%.200s() takes %.8s %" CYTHON_FORMAT_SSIZE_T "d positional argument%.1s (%" CYTHON_FORMAT_SSIZE_T "d given)",
|
|
func_name, more_or_less, num_expected,
|
|
(num_expected == 1) ? "" : "s", num_found);
|
|
}
|
|
|
|
/* RaiseDoubleKeywords */
|
|
static void __Pyx_RaiseDoubleKeywordsError(
|
|
const char* func_name,
|
|
PyObject* kw_name)
|
|
{
|
|
PyErr_Format(PyExc_TypeError,
|
|
#if PY_MAJOR_VERSION >= 3
|
|
"%s() got multiple values for keyword argument '%U'", func_name, kw_name);
|
|
#else
|
|
"%s() got multiple values for keyword argument '%s'", func_name,
|
|
PyString_AsString(kw_name));
|
|
#endif
|
|
}
|
|
|
|
/* ParseKeywords */
|
|
static int __Pyx_ParseOptionalKeywords(
|
|
PyObject *kwds,
|
|
PyObject **argnames[],
|
|
PyObject *kwds2,
|
|
PyObject *values[],
|
|
Py_ssize_t num_pos_args,
|
|
const char* function_name)
|
|
{
|
|
PyObject *key = 0, *value = 0;
|
|
Py_ssize_t pos = 0;
|
|
PyObject*** name;
|
|
PyObject*** first_kw_arg = argnames + num_pos_args;
|
|
while (PyDict_Next(kwds, &pos, &key, &value)) {
|
|
name = first_kw_arg;
|
|
while (*name && (**name != key)) name++;
|
|
if (*name) {
|
|
values[name-argnames] = value;
|
|
continue;
|
|
}
|
|
name = first_kw_arg;
|
|
#if PY_MAJOR_VERSION < 3
|
|
if (likely(PyString_Check(key))) {
|
|
while (*name) {
|
|
if ((CYTHON_COMPILING_IN_PYPY || PyString_GET_SIZE(**name) == PyString_GET_SIZE(key))
|
|
&& _PyString_Eq(**name, key)) {
|
|
values[name-argnames] = value;
|
|
break;
|
|
}
|
|
name++;
|
|
}
|
|
if (*name) continue;
|
|
else {
|
|
PyObject*** argname = argnames;
|
|
while (argname != first_kw_arg) {
|
|
if ((**argname == key) || (
|
|
(CYTHON_COMPILING_IN_PYPY || PyString_GET_SIZE(**argname) == PyString_GET_SIZE(key))
|
|
&& _PyString_Eq(**argname, key))) {
|
|
goto arg_passed_twice;
|
|
}
|
|
argname++;
|
|
}
|
|
}
|
|
} else
|
|
#endif
|
|
if (likely(PyUnicode_Check(key))) {
|
|
while (*name) {
|
|
int cmp = (**name == key) ? 0 :
|
|
#if !CYTHON_COMPILING_IN_PYPY && PY_MAJOR_VERSION >= 3
|
|
(__Pyx_PyUnicode_GET_LENGTH(**name) != __Pyx_PyUnicode_GET_LENGTH(key)) ? 1 :
|
|
#endif
|
|
PyUnicode_Compare(**name, key);
|
|
if (cmp < 0 && unlikely(PyErr_Occurred())) goto bad;
|
|
if (cmp == 0) {
|
|
values[name-argnames] = value;
|
|
break;
|
|
}
|
|
name++;
|
|
}
|
|
if (*name) continue;
|
|
else {
|
|
PyObject*** argname = argnames;
|
|
while (argname != first_kw_arg) {
|
|
int cmp = (**argname == key) ? 0 :
|
|
#if !CYTHON_COMPILING_IN_PYPY && PY_MAJOR_VERSION >= 3
|
|
(__Pyx_PyUnicode_GET_LENGTH(**argname) != __Pyx_PyUnicode_GET_LENGTH(key)) ? 1 :
|
|
#endif
|
|
PyUnicode_Compare(**argname, key);
|
|
if (cmp < 0 && unlikely(PyErr_Occurred())) goto bad;
|
|
if (cmp == 0) goto arg_passed_twice;
|
|
argname++;
|
|
}
|
|
}
|
|
} else
|
|
goto invalid_keyword_type;
|
|
if (kwds2) {
|
|
if (unlikely(PyDict_SetItem(kwds2, key, value))) goto bad;
|
|
} else {
|
|
goto invalid_keyword;
|
|
}
|
|
}
|
|
return 0;
|
|
arg_passed_twice:
|
|
__Pyx_RaiseDoubleKeywordsError(function_name, key);
|
|
goto bad;
|
|
invalid_keyword_type:
|
|
PyErr_Format(PyExc_TypeError,
|
|
"%.200s() keywords must be strings", function_name);
|
|
goto bad;
|
|
invalid_keyword:
|
|
PyErr_Format(PyExc_TypeError,
|
|
#if PY_MAJOR_VERSION < 3
|
|
"%.200s() got an unexpected keyword argument '%.200s'",
|
|
function_name, PyString_AsString(key));
|
|
#else
|
|
"%s() got an unexpected keyword argument '%U'",
|
|
function_name, key);
|
|
#endif
|
|
bad:
|
|
return -1;
|
|
}
|
|
|
|
/* ArgTypeTest */
|
|
static int __Pyx__ArgTypeTest(PyObject *obj, PyTypeObject *type, const char *name, int exact)
|
|
{
|
|
if (unlikely(!type)) {
|
|
PyErr_SetString(PyExc_SystemError, "Missing type object");
|
|
return 0;
|
|
}
|
|
else if (exact) {
|
|
#if PY_MAJOR_VERSION == 2
|
|
if ((type == &PyBaseString_Type) && likely(__Pyx_PyBaseString_CheckExact(obj))) return 1;
|
|
#endif
|
|
}
|
|
else {
|
|
if (likely(__Pyx_TypeCheck(obj, type))) return 1;
|
|
}
|
|
PyErr_Format(PyExc_TypeError,
|
|
"Argument '%.200s' has incorrect type (expected %.200s, got %.200s)",
|
|
name, type->tp_name, Py_TYPE(obj)->tp_name);
|
|
return 0;
|
|
}
|
|
|
|
/* PyObjectCall2Args */
|
|
static CYTHON_UNUSED PyObject* __Pyx_PyObject_Call2Args(PyObject* function, PyObject* arg1, PyObject* arg2) {
|
|
PyObject *args, *result = NULL;
|
|
#if CYTHON_FAST_PYCALL
|
|
if (PyFunction_Check(function)) {
|
|
PyObject *args[2] = {arg1, arg2};
|
|
return __Pyx_PyFunction_FastCall(function, args, 2);
|
|
}
|
|
#endif
|
|
#if CYTHON_FAST_PYCCALL
|
|
if (__Pyx_PyFastCFunction_Check(function)) {
|
|
PyObject *args[2] = {arg1, arg2};
|
|
return __Pyx_PyCFunction_FastCall(function, args, 2);
|
|
}
|
|
#endif
|
|
args = PyTuple_New(2);
|
|
if (unlikely(!args)) goto done;
|
|
Py_INCREF(arg1);
|
|
PyTuple_SET_ITEM(args, 0, arg1);
|
|
Py_INCREF(arg2);
|
|
PyTuple_SET_ITEM(args, 1, arg2);
|
|
Py_INCREF(function);
|
|
result = __Pyx_PyObject_Call(function, args, NULL);
|
|
Py_DECREF(args);
|
|
Py_DECREF(function);
|
|
done:
|
|
return result;
|
|
}
|
|
|
|
/* PyObjectCallMethO */
|
|
#if CYTHON_COMPILING_IN_CPYTHON
|
|
static CYTHON_INLINE PyObject* __Pyx_PyObject_CallMethO(PyObject *func, PyObject *arg) {
|
|
PyObject *self, *result;
|
|
PyCFunction cfunc;
|
|
cfunc = PyCFunction_GET_FUNCTION(func);
|
|
self = PyCFunction_GET_SELF(func);
|
|
if (unlikely(Py_EnterRecursiveCall((char*)" while calling a Python object")))
|
|
return NULL;
|
|
result = cfunc(self, arg);
|
|
Py_LeaveRecursiveCall();
|
|
if (unlikely(!result) && unlikely(!PyErr_Occurred())) {
|
|
PyErr_SetString(
|
|
PyExc_SystemError,
|
|
"NULL result without error in PyObject_Call");
|
|
}
|
|
return result;
|
|
}
|
|
#endif
|
|
|
|
/* PyObjectCallOneArg */
|
|
#if CYTHON_COMPILING_IN_CPYTHON
|
|
static PyObject* __Pyx__PyObject_CallOneArg(PyObject *func, PyObject *arg) {
|
|
PyObject *result;
|
|
PyObject *args = PyTuple_New(1);
|
|
if (unlikely(!args)) return NULL;
|
|
Py_INCREF(arg);
|
|
PyTuple_SET_ITEM(args, 0, arg);
|
|
result = __Pyx_PyObject_Call(func, args, NULL);
|
|
Py_DECREF(args);
|
|
return result;
|
|
}
|
|
static CYTHON_INLINE PyObject* __Pyx_PyObject_CallOneArg(PyObject *func, PyObject *arg) {
|
|
#if CYTHON_FAST_PYCALL
|
|
if (PyFunction_Check(func)) {
|
|
return __Pyx_PyFunction_FastCall(func, &arg, 1);
|
|
}
|
|
#endif
|
|
if (likely(PyCFunction_Check(func))) {
|
|
if (likely(PyCFunction_GET_FLAGS(func) & METH_O)) {
|
|
return __Pyx_PyObject_CallMethO(func, arg);
|
|
#if CYTHON_FAST_PYCCALL
|
|
} else if (PyCFunction_GET_FLAGS(func) & METH_FASTCALL) {
|
|
return __Pyx_PyCFunction_FastCall(func, &arg, 1);
|
|
#endif
|
|
}
|
|
}
|
|
return __Pyx__PyObject_CallOneArg(func, arg);
|
|
}
|
|
#else
|
|
static CYTHON_INLINE PyObject* __Pyx_PyObject_CallOneArg(PyObject *func, PyObject *arg) {
|
|
PyObject *result;
|
|
PyObject *args = PyTuple_Pack(1, arg);
|
|
if (unlikely(!args)) return NULL;
|
|
result = __Pyx_PyObject_Call(func, args, NULL);
|
|
Py_DECREF(args);
|
|
return result;
|
|
}
|
|
#endif
|
|
|
|
/* PyErrExceptionMatches */
|
|
#if CYTHON_FAST_THREAD_STATE
|
|
static int __Pyx_PyErr_ExceptionMatchesTuple(PyObject *exc_type, PyObject *tuple) {
|
|
Py_ssize_t i, n;
|
|
n = PyTuple_GET_SIZE(tuple);
|
|
#if PY_MAJOR_VERSION >= 3
|
|
for (i=0; i<n; i++) {
|
|
if (exc_type == PyTuple_GET_ITEM(tuple, i)) return 1;
|
|
}
|
|
#endif
|
|
for (i=0; i<n; i++) {
|
|
if (__Pyx_PyErr_GivenExceptionMatches(exc_type, PyTuple_GET_ITEM(tuple, i))) return 1;
|
|
}
|
|
return 0;
|
|
}
|
|
static CYTHON_INLINE int __Pyx_PyErr_ExceptionMatchesInState(PyThreadState* tstate, PyObject* err) {
|
|
PyObject *exc_type = tstate->curexc_type;
|
|
if (exc_type == err) return 1;
|
|
if (unlikely(!exc_type)) return 0;
|
|
if (unlikely(PyTuple_Check(err)))
|
|
return __Pyx_PyErr_ExceptionMatchesTuple(exc_type, err);
|
|
return __Pyx_PyErr_GivenExceptionMatches(exc_type, err);
|
|
}
|
|
#endif
|
|
|
|
/* GetAttr */
|
|
static CYTHON_INLINE PyObject *__Pyx_GetAttr(PyObject *o, PyObject *n) {
|
|
#if CYTHON_USE_TYPE_SLOTS
|
|
#if PY_MAJOR_VERSION >= 3
|
|
if (likely(PyUnicode_Check(n)))
|
|
#else
|
|
if (likely(PyString_Check(n)))
|
|
#endif
|
|
return __Pyx_PyObject_GetAttrStr(o, n);
|
|
#endif
|
|
return PyObject_GetAttr(o, n);
|
|
}
|
|
|
|
/* GetAttr3 */
|
|
static PyObject *__Pyx_GetAttr3Default(PyObject *d) {
|
|
__Pyx_PyThreadState_declare
|
|
__Pyx_PyThreadState_assign
|
|
if (unlikely(!__Pyx_PyErr_ExceptionMatches(PyExc_AttributeError)))
|
|
return NULL;
|
|
__Pyx_PyErr_Clear();
|
|
Py_INCREF(d);
|
|
return d;
|
|
}
|
|
static CYTHON_INLINE PyObject *__Pyx_GetAttr3(PyObject *o, PyObject *n, PyObject *d) {
|
|
PyObject *r = __Pyx_GetAttr(o, n);
|
|
return (likely(r)) ? r : __Pyx_GetAttr3Default(d);
|
|
}
|
|
|
|
/* GetModuleGlobalName */
|
|
#if CYTHON_USE_DICT_VERSIONS
|
|
static PyObject *__Pyx__GetModuleGlobalName(PyObject *name, PY_UINT64_T *dict_version, PyObject **dict_cached_value)
|
|
#else
|
|
static CYTHON_INLINE PyObject *__Pyx__GetModuleGlobalName(PyObject *name)
|
|
#endif
|
|
{
|
|
PyObject *result;
|
|
#if !CYTHON_AVOID_BORROWED_REFS
|
|
#if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX >= 0x030500A1
|
|
result = _PyDict_GetItem_KnownHash(__pyx_d, name, ((PyASCIIObject *) name)->hash);
|
|
__PYX_UPDATE_DICT_CACHE(__pyx_d, result, *dict_cached_value, *dict_version)
|
|
if (likely(result)) {
|
|
return __Pyx_NewRef(result);
|
|
} else if (unlikely(PyErr_Occurred())) {
|
|
return NULL;
|
|
}
|
|
#else
|
|
result = PyDict_GetItem(__pyx_d, name);
|
|
__PYX_UPDATE_DICT_CACHE(__pyx_d, result, *dict_cached_value, *dict_version)
|
|
if (likely(result)) {
|
|
return __Pyx_NewRef(result);
|
|
}
|
|
#endif
|
|
#else
|
|
result = PyObject_GetItem(__pyx_d, name);
|
|
__PYX_UPDATE_DICT_CACHE(__pyx_d, result, *dict_cached_value, *dict_version)
|
|
if (likely(result)) {
|
|
return __Pyx_NewRef(result);
|
|
}
|
|
PyErr_Clear();
|
|
#endif
|
|
return __Pyx_GetBuiltinName(name);
|
|
}
|
|
|
|
/* GetItemInt */
|
|
static PyObject *__Pyx_GetItemInt_Generic(PyObject *o, PyObject* j) {
|
|
PyObject *r;
|
|
if (!j) return NULL;
|
|
r = PyObject_GetItem(o, j);
|
|
Py_DECREF(j);
|
|
return r;
|
|
}
|
|
static CYTHON_INLINE PyObject *__Pyx_GetItemInt_List_Fast(PyObject *o, Py_ssize_t i,
|
|
CYTHON_NCP_UNUSED int wraparound,
|
|
CYTHON_NCP_UNUSED int boundscheck) {
|
|
#if CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS
|
|
Py_ssize_t wrapped_i = i;
|
|
if (wraparound & unlikely(i < 0)) {
|
|
wrapped_i += PyList_GET_SIZE(o);
|
|
}
|
|
if ((!boundscheck) || likely(__Pyx_is_valid_index(wrapped_i, PyList_GET_SIZE(o)))) {
|
|
PyObject *r = PyList_GET_ITEM(o, wrapped_i);
|
|
Py_INCREF(r);
|
|
return r;
|
|
}
|
|
return __Pyx_GetItemInt_Generic(o, PyInt_FromSsize_t(i));
|
|
#else
|
|
return PySequence_GetItem(o, i);
|
|
#endif
|
|
}
|
|
static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Tuple_Fast(PyObject *o, Py_ssize_t i,
|
|
CYTHON_NCP_UNUSED int wraparound,
|
|
CYTHON_NCP_UNUSED int boundscheck) {
|
|
#if CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS
|
|
Py_ssize_t wrapped_i = i;
|
|
if (wraparound & unlikely(i < 0)) {
|
|
wrapped_i += PyTuple_GET_SIZE(o);
|
|
}
|
|
if ((!boundscheck) || likely(__Pyx_is_valid_index(wrapped_i, PyTuple_GET_SIZE(o)))) {
|
|
PyObject *r = PyTuple_GET_ITEM(o, wrapped_i);
|
|
Py_INCREF(r);
|
|
return r;
|
|
}
|
|
return __Pyx_GetItemInt_Generic(o, PyInt_FromSsize_t(i));
|
|
#else
|
|
return PySequence_GetItem(o, i);
|
|
#endif
|
|
}
|
|
static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Fast(PyObject *o, Py_ssize_t i, int is_list,
|
|
CYTHON_NCP_UNUSED int wraparound,
|
|
CYTHON_NCP_UNUSED int boundscheck) {
|
|
#if CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS && CYTHON_USE_TYPE_SLOTS
|
|
if (is_list || PyList_CheckExact(o)) {
|
|
Py_ssize_t n = ((!wraparound) | likely(i >= 0)) ? i : i + PyList_GET_SIZE(o);
|
|
if ((!boundscheck) || (likely(__Pyx_is_valid_index(n, PyList_GET_SIZE(o))))) {
|
|
PyObject *r = PyList_GET_ITEM(o, n);
|
|
Py_INCREF(r);
|
|
return r;
|
|
}
|
|
}
|
|
else if (PyTuple_CheckExact(o)) {
|
|
Py_ssize_t n = ((!wraparound) | likely(i >= 0)) ? i : i + PyTuple_GET_SIZE(o);
|
|
if ((!boundscheck) || likely(__Pyx_is_valid_index(n, PyTuple_GET_SIZE(o)))) {
|
|
PyObject *r = PyTuple_GET_ITEM(o, n);
|
|
Py_INCREF(r);
|
|
return r;
|
|
}
|
|
} else {
|
|
PySequenceMethods *m = Py_TYPE(o)->tp_as_sequence;
|
|
if (likely(m && m->sq_item)) {
|
|
if (wraparound && unlikely(i < 0) && likely(m->sq_length)) {
|
|
Py_ssize_t l = m->sq_length(o);
|
|
if (likely(l >= 0)) {
|
|
i += l;
|
|
} else {
|
|
if (!PyErr_ExceptionMatches(PyExc_OverflowError))
|
|
return NULL;
|
|
PyErr_Clear();
|
|
}
|
|
}
|
|
return m->sq_item(o, i);
|
|
}
|
|
}
|
|
#else
|
|
if (is_list || PySequence_Check(o)) {
|
|
return PySequence_GetItem(o, i);
|
|
}
|
|
#endif
|
|
return __Pyx_GetItemInt_Generic(o, PyInt_FromSsize_t(i));
|
|
}
|
|
|
|
/* ObjectGetItem */
|
|
#if CYTHON_USE_TYPE_SLOTS
|
|
static PyObject *__Pyx_PyObject_GetIndex(PyObject *obj, PyObject* index) {
|
|
PyObject *runerr;
|
|
Py_ssize_t key_value;
|
|
PySequenceMethods *m = Py_TYPE(obj)->tp_as_sequence;
|
|
if (unlikely(!(m && m->sq_item))) {
|
|
PyErr_Format(PyExc_TypeError, "'%.200s' object is not subscriptable", Py_TYPE(obj)->tp_name);
|
|
return NULL;
|
|
}
|
|
key_value = __Pyx_PyIndex_AsSsize_t(index);
|
|
if (likely(key_value != -1 || !(runerr = PyErr_Occurred()))) {
|
|
return __Pyx_GetItemInt_Fast(obj, key_value, 0, 1, 1);
|
|
}
|
|
if (PyErr_GivenExceptionMatches(runerr, PyExc_OverflowError)) {
|
|
PyErr_Clear();
|
|
PyErr_Format(PyExc_IndexError, "cannot fit '%.200s' into an index-sized integer", Py_TYPE(index)->tp_name);
|
|
}
|
|
return NULL;
|
|
}
|
|
static PyObject *__Pyx_PyObject_GetItem(PyObject *obj, PyObject* key) {
|
|
PyMappingMethods *m = Py_TYPE(obj)->tp_as_mapping;
|
|
if (likely(m && m->mp_subscript)) {
|
|
return m->mp_subscript(obj, key);
|
|
}
|
|
return __Pyx_PyObject_GetIndex(obj, key);
|
|
}
|
|
#endif
|
|
|
|
/* ExtTypeTest */
|
|
static CYTHON_INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type) {
|
|
if (unlikely(!type)) {
|
|
PyErr_SetString(PyExc_SystemError, "Missing type object");
|
|
return 0;
|
|
}
|
|
if (likely(__Pyx_TypeCheck(obj, type)))
|
|
return 1;
|
|
PyErr_Format(PyExc_TypeError, "Cannot convert %.200s to %.200s",
|
|
Py_TYPE(obj)->tp_name, type->tp_name);
|
|
return 0;
|
|
}
|
|
|
|
/* BufferFallbackError */
|
|
static void __Pyx_RaiseBufferFallbackError(void) {
|
|
PyErr_SetString(PyExc_ValueError,
|
|
"Buffer acquisition failed on assignment; and then reacquiring the old buffer failed too!");
|
|
}
|
|
|
|
/* RaiseTooManyValuesToUnpack */
|
|
static CYTHON_INLINE void __Pyx_RaiseTooManyValuesError(Py_ssize_t expected) {
|
|
PyErr_Format(PyExc_ValueError,
|
|
"too many values to unpack (expected %" CYTHON_FORMAT_SSIZE_T "d)", expected);
|
|
}
|
|
|
|
/* RaiseNeedMoreValuesToUnpack */
|
|
static CYTHON_INLINE void __Pyx_RaiseNeedMoreValuesError(Py_ssize_t index) {
|
|
PyErr_Format(PyExc_ValueError,
|
|
"need more than %" CYTHON_FORMAT_SSIZE_T "d value%.1s to unpack",
|
|
index, (index == 1) ? "" : "s");
|
|
}
|
|
|
|
/* IterFinish */
|
|
static CYTHON_INLINE int __Pyx_IterFinish(void) {
|
|
#if CYTHON_FAST_THREAD_STATE
|
|
PyThreadState *tstate = __Pyx_PyThreadState_Current;
|
|
PyObject* exc_type = tstate->curexc_type;
|
|
if (unlikely(exc_type)) {
|
|
if (likely(__Pyx_PyErr_GivenExceptionMatches(exc_type, PyExc_StopIteration))) {
|
|
PyObject *exc_value, *exc_tb;
|
|
exc_value = tstate->curexc_value;
|
|
exc_tb = tstate->curexc_traceback;
|
|
tstate->curexc_type = 0;
|
|
tstate->curexc_value = 0;
|
|
tstate->curexc_traceback = 0;
|
|
Py_DECREF(exc_type);
|
|
Py_XDECREF(exc_value);
|
|
Py_XDECREF(exc_tb);
|
|
return 0;
|
|
} else {
|
|
return -1;
|
|
}
|
|
}
|
|
return 0;
|
|
#else
|
|
if (unlikely(PyErr_Occurred())) {
|
|
if (likely(PyErr_ExceptionMatches(PyExc_StopIteration))) {
|
|
PyErr_Clear();
|
|
return 0;
|
|
} else {
|
|
return -1;
|
|
}
|
|
}
|
|
return 0;
|
|
#endif
|
|
}
|
|
|
|
/* UnpackItemEndCheck */
|
|
static int __Pyx_IternextUnpackEndCheck(PyObject *retval, Py_ssize_t expected) {
|
|
if (unlikely(retval)) {
|
|
Py_DECREF(retval);
|
|
__Pyx_RaiseTooManyValuesError(expected);
|
|
return -1;
|
|
} else {
|
|
return __Pyx_IterFinish();
|
|
}
|
|
return 0;
|
|
}
|
|
|
|
/* DictGetItem */
|
|
#if PY_MAJOR_VERSION >= 3 && !CYTHON_COMPILING_IN_PYPY
|
|
static PyObject *__Pyx_PyDict_GetItem(PyObject *d, PyObject* key) {
|
|
PyObject *value;
|
|
value = PyDict_GetItemWithError(d, key);
|
|
if (unlikely(!value)) {
|
|
if (!PyErr_Occurred()) {
|
|
if (unlikely(PyTuple_Check(key))) {
|
|
PyObject* args = PyTuple_Pack(1, key);
|
|
if (likely(args)) {
|
|
PyErr_SetObject(PyExc_KeyError, args);
|
|
Py_DECREF(args);
|
|
}
|
|
} else {
|
|
PyErr_SetObject(PyExc_KeyError, key);
|
|
}
|
|
}
|
|
return NULL;
|
|
}
|
|
Py_INCREF(value);
|
|
return value;
|
|
}
|
|
#endif
|
|
|
|
/* PyObjectSetAttrStr */
|
|
#if CYTHON_USE_TYPE_SLOTS
|
|
static CYTHON_INLINE int __Pyx_PyObject_SetAttrStr(PyObject* obj, PyObject* attr_name, PyObject* value) {
|
|
PyTypeObject* tp = Py_TYPE(obj);
|
|
if (likely(tp->tp_setattro))
|
|
return tp->tp_setattro(obj, attr_name, value);
|
|
#if PY_MAJOR_VERSION < 3
|
|
if (likely(tp->tp_setattr))
|
|
return tp->tp_setattr(obj, PyString_AS_STRING(attr_name), value);
|
|
#endif
|
|
return PyObject_SetAttr(obj, attr_name, value);
|
|
}
|
|
#endif
|
|
|
|
/* SetItemInt */
|
|
static int __Pyx_SetItemInt_Generic(PyObject *o, PyObject *j, PyObject *v) {
|
|
int r;
|
|
if (!j) return -1;
|
|
r = PyObject_SetItem(o, j, v);
|
|
Py_DECREF(j);
|
|
return r;
|
|
}
|
|
static CYTHON_INLINE int __Pyx_SetItemInt_Fast(PyObject *o, Py_ssize_t i, PyObject *v, int is_list,
|
|
CYTHON_NCP_UNUSED int wraparound, CYTHON_NCP_UNUSED int boundscheck) {
|
|
#if CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS && CYTHON_USE_TYPE_SLOTS
|
|
if (is_list || PyList_CheckExact(o)) {
|
|
Py_ssize_t n = (!wraparound) ? i : ((likely(i >= 0)) ? i : i + PyList_GET_SIZE(o));
|
|
if ((!boundscheck) || likely(__Pyx_is_valid_index(n, PyList_GET_SIZE(o)))) {
|
|
PyObject* old = PyList_GET_ITEM(o, n);
|
|
Py_INCREF(v);
|
|
PyList_SET_ITEM(o, n, v);
|
|
Py_DECREF(old);
|
|
return 1;
|
|
}
|
|
} else {
|
|
PySequenceMethods *m = Py_TYPE(o)->tp_as_sequence;
|
|
if (likely(m && m->sq_ass_item)) {
|
|
if (wraparound && unlikely(i < 0) && likely(m->sq_length)) {
|
|
Py_ssize_t l = m->sq_length(o);
|
|
if (likely(l >= 0)) {
|
|
i += l;
|
|
} else {
|
|
if (!PyErr_ExceptionMatches(PyExc_OverflowError))
|
|
return -1;
|
|
PyErr_Clear();
|
|
}
|
|
}
|
|
return m->sq_ass_item(o, i, v);
|
|
}
|
|
}
|
|
#else
|
|
#if CYTHON_COMPILING_IN_PYPY
|
|
if (is_list || (PySequence_Check(o) && !PyDict_Check(o)))
|
|
#else
|
|
if (is_list || PySequence_Check(o))
|
|
#endif
|
|
{
|
|
return PySequence_SetItem(o, i, v);
|
|
}
|
|
#endif
|
|
return __Pyx_SetItemInt_Generic(o, PyInt_FromSsize_t(i), v);
|
|
}
|
|
|
|
/* PyFloatBinop */
|
|
#if !CYTHON_COMPILING_IN_PYPY
|
|
#define __Pyx_PyFloat_DivideCObj_ZeroDivisionError(operand) if (unlikely(zerodivision_check && ((operand) == 0))) {\
|
|
PyErr_SetString(PyExc_ZeroDivisionError, "float division by zero");\
|
|
return NULL;\
|
|
}
|
|
static PyObject* __Pyx_PyFloat_DivideCObj(PyObject *op1, PyObject *op2, double floatval, int inplace, int zerodivision_check) {
|
|
const double a = floatval;
|
|
double b, result;
|
|
(void)inplace;
|
|
(void)zerodivision_check;
|
|
if (likely(PyFloat_CheckExact(op2))) {
|
|
b = PyFloat_AS_DOUBLE(op2);
|
|
__Pyx_PyFloat_DivideCObj_ZeroDivisionError(b)
|
|
} else
|
|
#if PY_MAJOR_VERSION < 3
|
|
if (likely(PyInt_CheckExact(op2))) {
|
|
b = (double) PyInt_AS_LONG(op2);
|
|
__Pyx_PyFloat_DivideCObj_ZeroDivisionError(b)
|
|
} else
|
|
#endif
|
|
if (likely(PyLong_CheckExact(op2))) {
|
|
#if CYTHON_USE_PYLONG_INTERNALS
|
|
const digit* digits = ((PyLongObject*)op2)->ob_digit;
|
|
const Py_ssize_t size = Py_SIZE(op2);
|
|
switch (size) {
|
|
case 0: __Pyx_PyFloat_DivideCObj_ZeroDivisionError(0) break;
|
|
case -1: b = -(double) digits[0]; break;
|
|
case 1: b = (double) digits[0]; break;
|
|
case -2:
|
|
case 2:
|
|
if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT && ((8 * sizeof(unsigned long) < 53) || (1 * PyLong_SHIFT < 53))) {
|
|
b = (double) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]));
|
|
if ((8 * sizeof(unsigned long) < 53) || (2 * PyLong_SHIFT < 53) || (b < (double) ((PY_LONG_LONG)1 << 53))) {
|
|
if (size == -2)
|
|
b = -b;
|
|
break;
|
|
}
|
|
}
|
|
CYTHON_FALLTHROUGH;
|
|
case -3:
|
|
case 3:
|
|
if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT && ((8 * sizeof(unsigned long) < 53) || (2 * PyLong_SHIFT < 53))) {
|
|
b = (double) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]));
|
|
if ((8 * sizeof(unsigned long) < 53) || (3 * PyLong_SHIFT < 53) || (b < (double) ((PY_LONG_LONG)1 << 53))) {
|
|
if (size == -3)
|
|
b = -b;
|
|
break;
|
|
}
|
|
}
|
|
CYTHON_FALLTHROUGH;
|
|
case -4:
|
|
case 4:
|
|
if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT && ((8 * sizeof(unsigned long) < 53) || (3 * PyLong_SHIFT < 53))) {
|
|
b = (double) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]));
|
|
if ((8 * sizeof(unsigned long) < 53) || (4 * PyLong_SHIFT < 53) || (b < (double) ((PY_LONG_LONG)1 << 53))) {
|
|
if (size == -4)
|
|
b = -b;
|
|
break;
|
|
}
|
|
}
|
|
CYTHON_FALLTHROUGH;
|
|
default:
|
|
#else
|
|
{
|
|
#endif
|
|
b = PyLong_AsDouble(op2);
|
|
if (unlikely(b == -1.0 && PyErr_Occurred())) return NULL;
|
|
__Pyx_PyFloat_DivideCObj_ZeroDivisionError(b)
|
|
}
|
|
} else {
|
|
return (inplace ? __Pyx_PyNumber_InPlaceDivide(op1, op2) : __Pyx_PyNumber_Divide(op1, op2));
|
|
}
|
|
__Pyx_PyFloat_DivideCObj_ZeroDivisionError(b)
|
|
PyFPE_START_PROTECT("divide", return NULL)
|
|
result = a / b;
|
|
PyFPE_END_PROTECT(result)
|
|
return PyFloat_FromDouble(result);
|
|
}
|
|
#endif
|
|
|
|
/* Import */
|
|
static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level) {
|
|
PyObject *empty_list = 0;
|
|
PyObject *module = 0;
|
|
PyObject *global_dict = 0;
|
|
PyObject *empty_dict = 0;
|
|
PyObject *list;
|
|
#if PY_MAJOR_VERSION < 3
|
|
PyObject *py_import;
|
|
py_import = __Pyx_PyObject_GetAttrStr(__pyx_b, __pyx_n_s_import);
|
|
if (!py_import)
|
|
goto bad;
|
|
#endif
|
|
if (from_list)
|
|
list = from_list;
|
|
else {
|
|
empty_list = PyList_New(0);
|
|
if (!empty_list)
|
|
goto bad;
|
|
list = empty_list;
|
|
}
|
|
global_dict = PyModule_GetDict(__pyx_m);
|
|
if (!global_dict)
|
|
goto bad;
|
|
empty_dict = PyDict_New();
|
|
if (!empty_dict)
|
|
goto bad;
|
|
{
|
|
#if PY_MAJOR_VERSION >= 3
|
|
if (level == -1) {
|
|
if ((1) && (strchr(__Pyx_MODULE_NAME, '.'))) {
|
|
module = PyImport_ImportModuleLevelObject(
|
|
name, global_dict, empty_dict, list, 1);
|
|
if (!module) {
|
|
if (!PyErr_ExceptionMatches(PyExc_ImportError))
|
|
goto bad;
|
|
PyErr_Clear();
|
|
}
|
|
}
|
|
level = 0;
|
|
}
|
|
#endif
|
|
if (!module) {
|
|
#if PY_MAJOR_VERSION < 3
|
|
PyObject *py_level = PyInt_FromLong(level);
|
|
if (!py_level)
|
|
goto bad;
|
|
module = PyObject_CallFunctionObjArgs(py_import,
|
|
name, global_dict, empty_dict, list, py_level, (PyObject *)NULL);
|
|
Py_DECREF(py_level);
|
|
#else
|
|
module = PyImport_ImportModuleLevelObject(
|
|
name, global_dict, empty_dict, list, level);
|
|
#endif
|
|
}
|
|
}
|
|
bad:
|
|
#if PY_MAJOR_VERSION < 3
|
|
Py_XDECREF(py_import);
|
|
#endif
|
|
Py_XDECREF(empty_list);
|
|
Py_XDECREF(empty_dict);
|
|
return module;
|
|
}
|
|
|
|
/* ImportFrom */
|
|
static PyObject* __Pyx_ImportFrom(PyObject* module, PyObject* name) {
|
|
PyObject* value = __Pyx_PyObject_GetAttrStr(module, name);
|
|
if (unlikely(!value) && PyErr_ExceptionMatches(PyExc_AttributeError)) {
|
|
PyErr_Format(PyExc_ImportError,
|
|
#if PY_MAJOR_VERSION < 3
|
|
"cannot import name %.230s", PyString_AS_STRING(name));
|
|
#else
|
|
"cannot import name %S", name);
|
|
#endif
|
|
}
|
|
return value;
|
|
}
|
|
|
|
/* HasAttr */
|
|
static CYTHON_INLINE int __Pyx_HasAttr(PyObject *o, PyObject *n) {
|
|
PyObject *r;
|
|
if (unlikely(!__Pyx_PyBaseString_Check(n))) {
|
|
PyErr_SetString(PyExc_TypeError,
|
|
"hasattr(): attribute name must be string");
|
|
return -1;
|
|
}
|
|
r = __Pyx_GetAttr(o, n);
|
|
if (unlikely(!r)) {
|
|
PyErr_Clear();
|
|
return 0;
|
|
} else {
|
|
Py_DECREF(r);
|
|
return 1;
|
|
}
|
|
}
|
|
|
|
/* GetTopmostException */
|
|
#if CYTHON_USE_EXC_INFO_STACK
|
|
static _PyErr_StackItem *
|
|
__Pyx_PyErr_GetTopmostException(PyThreadState *tstate)
|
|
{
|
|
_PyErr_StackItem *exc_info = tstate->exc_info;
|
|
while ((exc_info->exc_type == NULL || exc_info->exc_type == Py_None) &&
|
|
exc_info->previous_item != NULL)
|
|
{
|
|
exc_info = exc_info->previous_item;
|
|
}
|
|
return exc_info;
|
|
}
|
|
#endif
|
|
|
|
/* SaveResetException */
|
|
#if CYTHON_FAST_THREAD_STATE
|
|
static CYTHON_INLINE void __Pyx__ExceptionSave(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb) {
|
|
#if CYTHON_USE_EXC_INFO_STACK
|
|
_PyErr_StackItem *exc_info = __Pyx_PyErr_GetTopmostException(tstate);
|
|
*type = exc_info->exc_type;
|
|
*value = exc_info->exc_value;
|
|
*tb = exc_info->exc_traceback;
|
|
#else
|
|
*type = tstate->exc_type;
|
|
*value = tstate->exc_value;
|
|
*tb = tstate->exc_traceback;
|
|
#endif
|
|
Py_XINCREF(*type);
|
|
Py_XINCREF(*value);
|
|
Py_XINCREF(*tb);
|
|
}
|
|
static CYTHON_INLINE void __Pyx__ExceptionReset(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb) {
|
|
PyObject *tmp_type, *tmp_value, *tmp_tb;
|
|
#if CYTHON_USE_EXC_INFO_STACK
|
|
_PyErr_StackItem *exc_info = tstate->exc_info;
|
|
tmp_type = exc_info->exc_type;
|
|
tmp_value = exc_info->exc_value;
|
|
tmp_tb = exc_info->exc_traceback;
|
|
exc_info->exc_type = type;
|
|
exc_info->exc_value = value;
|
|
exc_info->exc_traceback = tb;
|
|
#else
|
|
tmp_type = tstate->exc_type;
|
|
tmp_value = tstate->exc_value;
|
|
tmp_tb = tstate->exc_traceback;
|
|
tstate->exc_type = type;
|
|
tstate->exc_value = value;
|
|
tstate->exc_traceback = tb;
|
|
#endif
|
|
Py_XDECREF(tmp_type);
|
|
Py_XDECREF(tmp_value);
|
|
Py_XDECREF(tmp_tb);
|
|
}
|
|
#endif
|
|
|
|
/* GetException */
|
|
#if CYTHON_FAST_THREAD_STATE
|
|
static int __Pyx__GetException(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb)
|
|
#else
|
|
static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb)
|
|
#endif
|
|
{
|
|
PyObject *local_type, *local_value, *local_tb;
|
|
#if CYTHON_FAST_THREAD_STATE
|
|
PyObject *tmp_type, *tmp_value, *tmp_tb;
|
|
local_type = tstate->curexc_type;
|
|
local_value = tstate->curexc_value;
|
|
local_tb = tstate->curexc_traceback;
|
|
tstate->curexc_type = 0;
|
|
tstate->curexc_value = 0;
|
|
tstate->curexc_traceback = 0;
|
|
#else
|
|
PyErr_Fetch(&local_type, &local_value, &local_tb);
|
|
#endif
|
|
PyErr_NormalizeException(&local_type, &local_value, &local_tb);
|
|
#if CYTHON_FAST_THREAD_STATE
|
|
if (unlikely(tstate->curexc_type))
|
|
#else
|
|
if (unlikely(PyErr_Occurred()))
|
|
#endif
|
|
goto bad;
|
|
#if PY_MAJOR_VERSION >= 3
|
|
if (local_tb) {
|
|
if (unlikely(PyException_SetTraceback(local_value, local_tb) < 0))
|
|
goto bad;
|
|
}
|
|
#endif
|
|
Py_XINCREF(local_tb);
|
|
Py_XINCREF(local_type);
|
|
Py_XINCREF(local_value);
|
|
*type = local_type;
|
|
*value = local_value;
|
|
*tb = local_tb;
|
|
#if CYTHON_FAST_THREAD_STATE
|
|
#if CYTHON_USE_EXC_INFO_STACK
|
|
{
|
|
_PyErr_StackItem *exc_info = tstate->exc_info;
|
|
tmp_type = exc_info->exc_type;
|
|
tmp_value = exc_info->exc_value;
|
|
tmp_tb = exc_info->exc_traceback;
|
|
exc_info->exc_type = local_type;
|
|
exc_info->exc_value = local_value;
|
|
exc_info->exc_traceback = local_tb;
|
|
}
|
|
#else
|
|
tmp_type = tstate->exc_type;
|
|
tmp_value = tstate->exc_value;
|
|
tmp_tb = tstate->exc_traceback;
|
|
tstate->exc_type = local_type;
|
|
tstate->exc_value = local_value;
|
|
tstate->exc_traceback = local_tb;
|
|
#endif
|
|
Py_XDECREF(tmp_type);
|
|
Py_XDECREF(tmp_value);
|
|
Py_XDECREF(tmp_tb);
|
|
#else
|
|
PyErr_SetExcInfo(local_type, local_value, local_tb);
|
|
#endif
|
|
return 0;
|
|
bad:
|
|
*type = 0;
|
|
*value = 0;
|
|
*tb = 0;
|
|
Py_XDECREF(local_type);
|
|
Py_XDECREF(local_value);
|
|
Py_XDECREF(local_tb);
|
|
return -1;
|
|
}
|
|
|
|
/* CallNextTpTraverse */
|
|
static int __Pyx_call_next_tp_traverse(PyObject* obj, visitproc v, void *a, traverseproc current_tp_traverse) {
|
|
PyTypeObject* type = Py_TYPE(obj);
|
|
while (type && type->tp_traverse != current_tp_traverse)
|
|
type = type->tp_base;
|
|
while (type && type->tp_traverse == current_tp_traverse)
|
|
type = type->tp_base;
|
|
if (type && type->tp_traverse)
|
|
return type->tp_traverse(obj, v, a);
|
|
return 0;
|
|
}
|
|
|
|
/* CallNextTpClear */
|
|
static void __Pyx_call_next_tp_clear(PyObject* obj, inquiry current_tp_clear) {
|
|
PyTypeObject* type = Py_TYPE(obj);
|
|
while (type && type->tp_clear != current_tp_clear)
|
|
type = type->tp_base;
|
|
while (type && type->tp_clear == current_tp_clear)
|
|
type = type->tp_base;
|
|
if (type && type->tp_clear)
|
|
type->tp_clear(obj);
|
|
}
|
|
|
|
/* PyObject_GenericGetAttrNoDict */
|
|
#if CYTHON_USE_TYPE_SLOTS && CYTHON_USE_PYTYPE_LOOKUP && PY_VERSION_HEX < 0x03070000
|
|
static PyObject *__Pyx_RaiseGenericGetAttributeError(PyTypeObject *tp, PyObject *attr_name) {
|
|
PyErr_Format(PyExc_AttributeError,
|
|
#if PY_MAJOR_VERSION >= 3
|
|
"'%.50s' object has no attribute '%U'",
|
|
tp->tp_name, attr_name);
|
|
#else
|
|
"'%.50s' object has no attribute '%.400s'",
|
|
tp->tp_name, PyString_AS_STRING(attr_name));
|
|
#endif
|
|
return NULL;
|
|
}
|
|
static CYTHON_INLINE PyObject* __Pyx_PyObject_GenericGetAttrNoDict(PyObject* obj, PyObject* attr_name) {
|
|
PyObject *descr;
|
|
PyTypeObject *tp = Py_TYPE(obj);
|
|
if (unlikely(!PyString_Check(attr_name))) {
|
|
return PyObject_GenericGetAttr(obj, attr_name);
|
|
}
|
|
assert(!tp->tp_dictoffset);
|
|
descr = _PyType_Lookup(tp, attr_name);
|
|
if (unlikely(!descr)) {
|
|
return __Pyx_RaiseGenericGetAttributeError(tp, attr_name);
|
|
}
|
|
Py_INCREF(descr);
|
|
#if PY_MAJOR_VERSION < 3
|
|
if (likely(PyType_HasFeature(Py_TYPE(descr), Py_TPFLAGS_HAVE_CLASS)))
|
|
#endif
|
|
{
|
|
descrgetfunc f = Py_TYPE(descr)->tp_descr_get;
|
|
if (unlikely(f)) {
|
|
PyObject *res = f(descr, obj, (PyObject *)tp);
|
|
Py_DECREF(descr);
|
|
return res;
|
|
}
|
|
}
|
|
return descr;
|
|
}
|
|
#endif
|
|
|
|
/* PyObject_GenericGetAttr */
|
|
#if CYTHON_USE_TYPE_SLOTS && CYTHON_USE_PYTYPE_LOOKUP && PY_VERSION_HEX < 0x03070000
|
|
static PyObject* __Pyx_PyObject_GenericGetAttr(PyObject* obj, PyObject* attr_name) {
|
|
if (unlikely(Py_TYPE(obj)->tp_dictoffset)) {
|
|
return PyObject_GenericGetAttr(obj, attr_name);
|
|
}
|
|
return __Pyx_PyObject_GenericGetAttrNoDict(obj, attr_name);
|
|
}
|
|
#endif
|
|
|
|
/* SetVTable */
|
|
static int __Pyx_SetVtable(PyObject *dict, void *vtable) {
|
|
#if PY_VERSION_HEX >= 0x02070000
|
|
PyObject *ob = PyCapsule_New(vtable, 0, 0);
|
|
#else
|
|
PyObject *ob = PyCObject_FromVoidPtr(vtable, 0);
|
|
#endif
|
|
if (!ob)
|
|
goto bad;
|
|
if (PyDict_SetItem(dict, __pyx_n_s_pyx_vtable, ob) < 0)
|
|
goto bad;
|
|
Py_DECREF(ob);
|
|
return 0;
|
|
bad:
|
|
Py_XDECREF(ob);
|
|
return -1;
|
|
}
|
|
|
|
/* PyObjectGetAttrStrNoError */
|
|
static void __Pyx_PyObject_GetAttrStr_ClearAttributeError(void) {
|
|
__Pyx_PyThreadState_declare
|
|
__Pyx_PyThreadState_assign
|
|
if (likely(__Pyx_PyErr_ExceptionMatches(PyExc_AttributeError)))
|
|
__Pyx_PyErr_Clear();
|
|
}
|
|
static CYTHON_INLINE PyObject* __Pyx_PyObject_GetAttrStrNoError(PyObject* obj, PyObject* attr_name) {
|
|
PyObject *result;
|
|
#if CYTHON_COMPILING_IN_CPYTHON && CYTHON_USE_TYPE_SLOTS && PY_VERSION_HEX >= 0x030700B1
|
|
PyTypeObject* tp = Py_TYPE(obj);
|
|
if (likely(tp->tp_getattro == PyObject_GenericGetAttr)) {
|
|
return _PyObject_GenericGetAttrWithDict(obj, attr_name, NULL, 1);
|
|
}
|
|
#endif
|
|
result = __Pyx_PyObject_GetAttrStr(obj, attr_name);
|
|
if (unlikely(!result)) {
|
|
__Pyx_PyObject_GetAttrStr_ClearAttributeError();
|
|
}
|
|
return result;
|
|
}
|
|
|
|
/* SetupReduce */
|
|
static int __Pyx_setup_reduce_is_named(PyObject* meth, PyObject* name) {
|
|
int ret;
|
|
PyObject *name_attr;
|
|
name_attr = __Pyx_PyObject_GetAttrStr(meth, __pyx_n_s_name);
|
|
if (likely(name_attr)) {
|
|
ret = PyObject_RichCompareBool(name_attr, name, Py_EQ);
|
|
} else {
|
|
ret = -1;
|
|
}
|
|
if (unlikely(ret < 0)) {
|
|
PyErr_Clear();
|
|
ret = 0;
|
|
}
|
|
Py_XDECREF(name_attr);
|
|
return ret;
|
|
}
|
|
static int __Pyx_setup_reduce(PyObject* type_obj) {
|
|
int ret = 0;
|
|
PyObject *object_reduce = NULL;
|
|
PyObject *object_reduce_ex = NULL;
|
|
PyObject *reduce = NULL;
|
|
PyObject *reduce_ex = NULL;
|
|
PyObject *reduce_cython = NULL;
|
|
PyObject *setstate = NULL;
|
|
PyObject *setstate_cython = NULL;
|
|
#if CYTHON_USE_PYTYPE_LOOKUP
|
|
if (_PyType_Lookup((PyTypeObject*)type_obj, __pyx_n_s_getstate)) goto __PYX_GOOD;
|
|
#else
|
|
if (PyObject_HasAttr(type_obj, __pyx_n_s_getstate)) goto __PYX_GOOD;
|
|
#endif
|
|
#if CYTHON_USE_PYTYPE_LOOKUP
|
|
object_reduce_ex = _PyType_Lookup(&PyBaseObject_Type, __pyx_n_s_reduce_ex); if (!object_reduce_ex) goto __PYX_BAD;
|
|
#else
|
|
object_reduce_ex = __Pyx_PyObject_GetAttrStr((PyObject*)&PyBaseObject_Type, __pyx_n_s_reduce_ex); if (!object_reduce_ex) goto __PYX_BAD;
|
|
#endif
|
|
reduce_ex = __Pyx_PyObject_GetAttrStr(type_obj, __pyx_n_s_reduce_ex); if (unlikely(!reduce_ex)) goto __PYX_BAD;
|
|
if (reduce_ex == object_reduce_ex) {
|
|
#if CYTHON_USE_PYTYPE_LOOKUP
|
|
object_reduce = _PyType_Lookup(&PyBaseObject_Type, __pyx_n_s_reduce); if (!object_reduce) goto __PYX_BAD;
|
|
#else
|
|
object_reduce = __Pyx_PyObject_GetAttrStr((PyObject*)&PyBaseObject_Type, __pyx_n_s_reduce); if (!object_reduce) goto __PYX_BAD;
|
|
#endif
|
|
reduce = __Pyx_PyObject_GetAttrStr(type_obj, __pyx_n_s_reduce); if (unlikely(!reduce)) goto __PYX_BAD;
|
|
if (reduce == object_reduce || __Pyx_setup_reduce_is_named(reduce, __pyx_n_s_reduce_cython)) {
|
|
reduce_cython = __Pyx_PyObject_GetAttrStrNoError(type_obj, __pyx_n_s_reduce_cython);
|
|
if (likely(reduce_cython)) {
|
|
ret = PyDict_SetItem(((PyTypeObject*)type_obj)->tp_dict, __pyx_n_s_reduce, reduce_cython); if (unlikely(ret < 0)) goto __PYX_BAD;
|
|
ret = PyDict_DelItem(((PyTypeObject*)type_obj)->tp_dict, __pyx_n_s_reduce_cython); if (unlikely(ret < 0)) goto __PYX_BAD;
|
|
} else if (reduce == object_reduce || PyErr_Occurred()) {
|
|
goto __PYX_BAD;
|
|
}
|
|
setstate = __Pyx_PyObject_GetAttrStr(type_obj, __pyx_n_s_setstate);
|
|
if (!setstate) PyErr_Clear();
|
|
if (!setstate || __Pyx_setup_reduce_is_named(setstate, __pyx_n_s_setstate_cython)) {
|
|
setstate_cython = __Pyx_PyObject_GetAttrStrNoError(type_obj, __pyx_n_s_setstate_cython);
|
|
if (likely(setstate_cython)) {
|
|
ret = PyDict_SetItem(((PyTypeObject*)type_obj)->tp_dict, __pyx_n_s_setstate, setstate_cython); if (unlikely(ret < 0)) goto __PYX_BAD;
|
|
ret = PyDict_DelItem(((PyTypeObject*)type_obj)->tp_dict, __pyx_n_s_setstate_cython); if (unlikely(ret < 0)) goto __PYX_BAD;
|
|
} else if (!setstate || PyErr_Occurred()) {
|
|
goto __PYX_BAD;
|
|
}
|
|
}
|
|
PyType_Modified((PyTypeObject*)type_obj);
|
|
}
|
|
}
|
|
goto __PYX_GOOD;
|
|
__PYX_BAD:
|
|
if (!PyErr_Occurred())
|
|
PyErr_Format(PyExc_RuntimeError, "Unable to initialize pickling for %s", ((PyTypeObject*)type_obj)->tp_name);
|
|
ret = -1;
|
|
__PYX_GOOD:
|
|
#if !CYTHON_USE_PYTYPE_LOOKUP
|
|
Py_XDECREF(object_reduce);
|
|
Py_XDECREF(object_reduce_ex);
|
|
#endif
|
|
Py_XDECREF(reduce);
|
|
Py_XDECREF(reduce_ex);
|
|
Py_XDECREF(reduce_cython);
|
|
Py_XDECREF(setstate);
|
|
Py_XDECREF(setstate_cython);
|
|
return ret;
|
|
}
|
|
|
|
/* TypeImport */
|
|
#ifndef __PYX_HAVE_RT_ImportType
|
|
#define __PYX_HAVE_RT_ImportType
|
|
static PyTypeObject *__Pyx_ImportType(PyObject *module, const char *module_name, const char *class_name,
|
|
size_t size, enum __Pyx_ImportType_CheckSize check_size)
|
|
{
|
|
PyObject *result = 0;
|
|
char warning[200];
|
|
Py_ssize_t basicsize;
|
|
#ifdef Py_LIMITED_API
|
|
PyObject *py_basicsize;
|
|
#endif
|
|
result = PyObject_GetAttrString(module, class_name);
|
|
if (!result)
|
|
goto bad;
|
|
if (!PyType_Check(result)) {
|
|
PyErr_Format(PyExc_TypeError,
|
|
"%.200s.%.200s is not a type object",
|
|
module_name, class_name);
|
|
goto bad;
|
|
}
|
|
#ifndef Py_LIMITED_API
|
|
basicsize = ((PyTypeObject *)result)->tp_basicsize;
|
|
#else
|
|
py_basicsize = PyObject_GetAttrString(result, "__basicsize__");
|
|
if (!py_basicsize)
|
|
goto bad;
|
|
basicsize = PyLong_AsSsize_t(py_basicsize);
|
|
Py_DECREF(py_basicsize);
|
|
py_basicsize = 0;
|
|
if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred())
|
|
goto bad;
|
|
#endif
|
|
if ((size_t)basicsize < size) {
|
|
PyErr_Format(PyExc_ValueError,
|
|
"%.200s.%.200s size changed, may indicate binary incompatibility. "
|
|
"Expected %zd from C header, got %zd from PyObject",
|
|
module_name, class_name, size, basicsize);
|
|
goto bad;
|
|
}
|
|
if (check_size == __Pyx_ImportType_CheckSize_Error && (size_t)basicsize != size) {
|
|
PyErr_Format(PyExc_ValueError,
|
|
"%.200s.%.200s size changed, may indicate binary incompatibility. "
|
|
"Expected %zd from C header, got %zd from PyObject",
|
|
module_name, class_name, size, basicsize);
|
|
goto bad;
|
|
}
|
|
else if (check_size == __Pyx_ImportType_CheckSize_Warn && (size_t)basicsize > size) {
|
|
PyOS_snprintf(warning, sizeof(warning),
|
|
"%s.%s size changed, may indicate binary incompatibility. "
|
|
"Expected %zd from C header, got %zd from PyObject",
|
|
module_name, class_name, size, basicsize);
|
|
if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad;
|
|
}
|
|
return (PyTypeObject *)result;
|
|
bad:
|
|
Py_XDECREF(result);
|
|
return NULL;
|
|
}
|
|
#endif
|
|
|
|
/* CLineInTraceback */
|
|
#ifndef CYTHON_CLINE_IN_TRACEBACK
|
|
static int __Pyx_CLineForTraceback(CYTHON_NCP_UNUSED PyThreadState *tstate, int c_line) {
|
|
PyObject *use_cline;
|
|
PyObject *ptype, *pvalue, *ptraceback;
|
|
#if CYTHON_COMPILING_IN_CPYTHON
|
|
PyObject **cython_runtime_dict;
|
|
#endif
|
|
if (unlikely(!__pyx_cython_runtime)) {
|
|
return c_line;
|
|
}
|
|
__Pyx_ErrFetchInState(tstate, &ptype, &pvalue, &ptraceback);
|
|
#if CYTHON_COMPILING_IN_CPYTHON
|
|
cython_runtime_dict = _PyObject_GetDictPtr(__pyx_cython_runtime);
|
|
if (likely(cython_runtime_dict)) {
|
|
__PYX_PY_DICT_LOOKUP_IF_MODIFIED(
|
|
use_cline, *cython_runtime_dict,
|
|
__Pyx_PyDict_GetItemStr(*cython_runtime_dict, __pyx_n_s_cline_in_traceback))
|
|
} else
|
|
#endif
|
|
{
|
|
PyObject *use_cline_obj = __Pyx_PyObject_GetAttrStr(__pyx_cython_runtime, __pyx_n_s_cline_in_traceback);
|
|
if (use_cline_obj) {
|
|
use_cline = PyObject_Not(use_cline_obj) ? Py_False : Py_True;
|
|
Py_DECREF(use_cline_obj);
|
|
} else {
|
|
PyErr_Clear();
|
|
use_cline = NULL;
|
|
}
|
|
}
|
|
if (!use_cline) {
|
|
c_line = 0;
|
|
PyObject_SetAttr(__pyx_cython_runtime, __pyx_n_s_cline_in_traceback, Py_False);
|
|
}
|
|
else if (use_cline == Py_False || (use_cline != Py_True && PyObject_Not(use_cline) != 0)) {
|
|
c_line = 0;
|
|
}
|
|
__Pyx_ErrRestoreInState(tstate, ptype, pvalue, ptraceback);
|
|
return c_line;
|
|
}
|
|
#endif
|
|
|
|
/* CodeObjectCache */
|
|
static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) {
|
|
int start = 0, mid = 0, end = count - 1;
|
|
if (end >= 0 && code_line > entries[end].code_line) {
|
|
return count;
|
|
}
|
|
while (start < end) {
|
|
mid = start + (end - start) / 2;
|
|
if (code_line < entries[mid].code_line) {
|
|
end = mid;
|
|
} else if (code_line > entries[mid].code_line) {
|
|
start = mid + 1;
|
|
} else {
|
|
return mid;
|
|
}
|
|
}
|
|
if (code_line <= entries[mid].code_line) {
|
|
return mid;
|
|
} else {
|
|
return mid + 1;
|
|
}
|
|
}
|
|
static PyCodeObject *__pyx_find_code_object(int code_line) {
|
|
PyCodeObject* code_object;
|
|
int pos;
|
|
if (unlikely(!code_line) || unlikely(!__pyx_code_cache.entries)) {
|
|
return NULL;
|
|
}
|
|
pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
|
|
if (unlikely(pos >= __pyx_code_cache.count) || unlikely(__pyx_code_cache.entries[pos].code_line != code_line)) {
|
|
return NULL;
|
|
}
|
|
code_object = __pyx_code_cache.entries[pos].code_object;
|
|
Py_INCREF(code_object);
|
|
return code_object;
|
|
}
|
|
static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) {
|
|
int pos, i;
|
|
__Pyx_CodeObjectCacheEntry* entries = __pyx_code_cache.entries;
|
|
if (unlikely(!code_line)) {
|
|
return;
|
|
}
|
|
if (unlikely(!entries)) {
|
|
entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Malloc(64*sizeof(__Pyx_CodeObjectCacheEntry));
|
|
if (likely(entries)) {
|
|
__pyx_code_cache.entries = entries;
|
|
__pyx_code_cache.max_count = 64;
|
|
__pyx_code_cache.count = 1;
|
|
entries[0].code_line = code_line;
|
|
entries[0].code_object = code_object;
|
|
Py_INCREF(code_object);
|
|
}
|
|
return;
|
|
}
|
|
pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line);
|
|
if ((pos < __pyx_code_cache.count) && unlikely(__pyx_code_cache.entries[pos].code_line == code_line)) {
|
|
PyCodeObject* tmp = entries[pos].code_object;
|
|
entries[pos].code_object = code_object;
|
|
Py_DECREF(tmp);
|
|
return;
|
|
}
|
|
if (__pyx_code_cache.count == __pyx_code_cache.max_count) {
|
|
int new_max = __pyx_code_cache.max_count + 64;
|
|
entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Realloc(
|
|
__pyx_code_cache.entries, ((size_t)new_max) * sizeof(__Pyx_CodeObjectCacheEntry));
|
|
if (unlikely(!entries)) {
|
|
return;
|
|
}
|
|
__pyx_code_cache.entries = entries;
|
|
__pyx_code_cache.max_count = new_max;
|
|
}
|
|
for (i=__pyx_code_cache.count; i>pos; i--) {
|
|
entries[i] = entries[i-1];
|
|
}
|
|
entries[pos].code_line = code_line;
|
|
entries[pos].code_object = code_object;
|
|
__pyx_code_cache.count++;
|
|
Py_INCREF(code_object);
|
|
}
|
|
|
|
/* AddTraceback */
|
|
#include "compile.h"
|
|
#include "frameobject.h"
|
|
#include "traceback.h"
|
|
static PyCodeObject* __Pyx_CreateCodeObjectForTraceback(
|
|
const char *funcname, int c_line,
|
|
int py_line, const char *filename) {
|
|
PyCodeObject *py_code = 0;
|
|
PyObject *py_srcfile = 0;
|
|
PyObject *py_funcname = 0;
|
|
#if PY_MAJOR_VERSION < 3
|
|
py_srcfile = PyString_FromString(filename);
|
|
#else
|
|
py_srcfile = PyUnicode_FromString(filename);
|
|
#endif
|
|
if (!py_srcfile) goto bad;
|
|
if (c_line) {
|
|
#if PY_MAJOR_VERSION < 3
|
|
py_funcname = PyString_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
|
|
#else
|
|
py_funcname = PyUnicode_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line);
|
|
#endif
|
|
}
|
|
else {
|
|
#if PY_MAJOR_VERSION < 3
|
|
py_funcname = PyString_FromString(funcname);
|
|
#else
|
|
py_funcname = PyUnicode_FromString(funcname);
|
|
#endif
|
|
}
|
|
if (!py_funcname) goto bad;
|
|
py_code = __Pyx_PyCode_New(
|
|
0,
|
|
0,
|
|
0,
|
|
0,
|
|
0,
|
|
__pyx_empty_bytes, /*PyObject *code,*/
|
|
__pyx_empty_tuple, /*PyObject *consts,*/
|
|
__pyx_empty_tuple, /*PyObject *names,*/
|
|
__pyx_empty_tuple, /*PyObject *varnames,*/
|
|
__pyx_empty_tuple, /*PyObject *freevars,*/
|
|
__pyx_empty_tuple, /*PyObject *cellvars,*/
|
|
py_srcfile, /*PyObject *filename,*/
|
|
py_funcname, /*PyObject *name,*/
|
|
py_line,
|
|
__pyx_empty_bytes /*PyObject *lnotab*/
|
|
);
|
|
Py_DECREF(py_srcfile);
|
|
Py_DECREF(py_funcname);
|
|
return py_code;
|
|
bad:
|
|
Py_XDECREF(py_srcfile);
|
|
Py_XDECREF(py_funcname);
|
|
return NULL;
|
|
}
|
|
static void __Pyx_AddTraceback(const char *funcname, int c_line,
|
|
int py_line, const char *filename) {
|
|
PyCodeObject *py_code = 0;
|
|
PyFrameObject *py_frame = 0;
|
|
PyThreadState *tstate = __Pyx_PyThreadState_Current;
|
|
if (c_line) {
|
|
c_line = __Pyx_CLineForTraceback(tstate, c_line);
|
|
}
|
|
py_code = __pyx_find_code_object(c_line ? -c_line : py_line);
|
|
if (!py_code) {
|
|
py_code = __Pyx_CreateCodeObjectForTraceback(
|
|
funcname, c_line, py_line, filename);
|
|
if (!py_code) goto bad;
|
|
__pyx_insert_code_object(c_line ? -c_line : py_line, py_code);
|
|
}
|
|
py_frame = PyFrame_New(
|
|
tstate, /*PyThreadState *tstate,*/
|
|
py_code, /*PyCodeObject *code,*/
|
|
__pyx_d, /*PyObject *globals,*/
|
|
0 /*PyObject *locals*/
|
|
);
|
|
if (!py_frame) goto bad;
|
|
__Pyx_PyFrame_SetLineNumber(py_frame, py_line);
|
|
PyTraceBack_Here(py_frame);
|
|
bad:
|
|
Py_XDECREF(py_code);
|
|
Py_XDECREF(py_frame);
|
|
}
|
|
|
|
/* CIntToPy */
|
|
static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value) {
|
|
const int neg_one = (int) ((int) 0 - (int) 1), const_zero = (int) 0;
|
|
const int is_unsigned = neg_one > const_zero;
|
|
if (is_unsigned) {
|
|
if (sizeof(int) < sizeof(long)) {
|
|
return PyInt_FromLong((long) value);
|
|
} else if (sizeof(int) <= sizeof(unsigned long)) {
|
|
return PyLong_FromUnsignedLong((unsigned long) value);
|
|
#ifdef HAVE_LONG_LONG
|
|
} else if (sizeof(int) <= sizeof(unsigned PY_LONG_LONG)) {
|
|
return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value);
|
|
#endif
|
|
}
|
|
} else {
|
|
if (sizeof(int) <= sizeof(long)) {
|
|
return PyInt_FromLong((long) value);
|
|
#ifdef HAVE_LONG_LONG
|
|
} else if (sizeof(int) <= sizeof(PY_LONG_LONG)) {
|
|
return PyLong_FromLongLong((PY_LONG_LONG) value);
|
|
#endif
|
|
}
|
|
}
|
|
{
|
|
int one = 1; int little = (int)*(unsigned char *)&one;
|
|
unsigned char *bytes = (unsigned char *)&value;
|
|
return _PyLong_FromByteArray(bytes, sizeof(int),
|
|
little, !is_unsigned);
|
|
}
|
|
}
|
|
|
|
/* CIntFromPyVerify */
|
|
#define __PYX_VERIFY_RETURN_INT(target_type, func_type, func_value)\
|
|
__PYX__VERIFY_RETURN_INT(target_type, func_type, func_value, 0)
|
|
#define __PYX_VERIFY_RETURN_INT_EXC(target_type, func_type, func_value)\
|
|
__PYX__VERIFY_RETURN_INT(target_type, func_type, func_value, 1)
|
|
#define __PYX__VERIFY_RETURN_INT(target_type, func_type, func_value, exc)\
|
|
{\
|
|
func_type value = func_value;\
|
|
if (sizeof(target_type) < sizeof(func_type)) {\
|
|
if (unlikely(value != (func_type) (target_type) value)) {\
|
|
func_type zero = 0;\
|
|
if (exc && unlikely(value == (func_type)-1 && PyErr_Occurred()))\
|
|
return (target_type) -1;\
|
|
if (is_unsigned && unlikely(value < zero))\
|
|
goto raise_neg_overflow;\
|
|
else\
|
|
goto raise_overflow;\
|
|
}\
|
|
}\
|
|
return (target_type) value;\
|
|
}
|
|
|
|
#if PY_MAJOR_VERSION < 3
|
|
static int __Pyx_GetBuffer(PyObject *obj, Py_buffer *view, int flags) {
|
|
if (PyObject_CheckBuffer(obj)) return PyObject_GetBuffer(obj, view, flags);
|
|
PyErr_Format(PyExc_TypeError, "'%.200s' does not have the buffer interface", Py_TYPE(obj)->tp_name);
|
|
return -1;
|
|
}
|
|
static void __Pyx_ReleaseBuffer(Py_buffer *view) {
|
|
PyObject *obj = view->obj;
|
|
if (!obj) return;
|
|
if (PyObject_CheckBuffer(obj)) {
|
|
PyBuffer_Release(view);
|
|
return;
|
|
}
|
|
if ((0)) {}
|
|
view->obj = NULL;
|
|
Py_DECREF(obj);
|
|
}
|
|
#endif
|
|
|
|
|
|
/* CIntToPy */
|
|
static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) {
|
|
const long neg_one = (long) ((long) 0 - (long) 1), const_zero = (long) 0;
|
|
const int is_unsigned = neg_one > const_zero;
|
|
if (is_unsigned) {
|
|
if (sizeof(long) < sizeof(long)) {
|
|
return PyInt_FromLong((long) value);
|
|
} else if (sizeof(long) <= sizeof(unsigned long)) {
|
|
return PyLong_FromUnsignedLong((unsigned long) value);
|
|
#ifdef HAVE_LONG_LONG
|
|
} else if (sizeof(long) <= sizeof(unsigned PY_LONG_LONG)) {
|
|
return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value);
|
|
#endif
|
|
}
|
|
} else {
|
|
if (sizeof(long) <= sizeof(long)) {
|
|
return PyInt_FromLong((long) value);
|
|
#ifdef HAVE_LONG_LONG
|
|
} else if (sizeof(long) <= sizeof(PY_LONG_LONG)) {
|
|
return PyLong_FromLongLong((PY_LONG_LONG) value);
|
|
#endif
|
|
}
|
|
}
|
|
{
|
|
int one = 1; int little = (int)*(unsigned char *)&one;
|
|
unsigned char *bytes = (unsigned char *)&value;
|
|
return _PyLong_FromByteArray(bytes, sizeof(long),
|
|
little, !is_unsigned);
|
|
}
|
|
}
|
|
|
|
/* CIntToPy */
|
|
static CYTHON_INLINE PyObject* __Pyx_PyInt_From_Py_intptr_t(Py_intptr_t value) {
|
|
const Py_intptr_t neg_one = (Py_intptr_t) ((Py_intptr_t) 0 - (Py_intptr_t) 1), const_zero = (Py_intptr_t) 0;
|
|
const int is_unsigned = neg_one > const_zero;
|
|
if (is_unsigned) {
|
|
if (sizeof(Py_intptr_t) < sizeof(long)) {
|
|
return PyInt_FromLong((long) value);
|
|
} else if (sizeof(Py_intptr_t) <= sizeof(unsigned long)) {
|
|
return PyLong_FromUnsignedLong((unsigned long) value);
|
|
#ifdef HAVE_LONG_LONG
|
|
} else if (sizeof(Py_intptr_t) <= sizeof(unsigned PY_LONG_LONG)) {
|
|
return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value);
|
|
#endif
|
|
}
|
|
} else {
|
|
if (sizeof(Py_intptr_t) <= sizeof(long)) {
|
|
return PyInt_FromLong((long) value);
|
|
#ifdef HAVE_LONG_LONG
|
|
} else if (sizeof(Py_intptr_t) <= sizeof(PY_LONG_LONG)) {
|
|
return PyLong_FromLongLong((PY_LONG_LONG) value);
|
|
#endif
|
|
}
|
|
}
|
|
{
|
|
int one = 1; int little = (int)*(unsigned char *)&one;
|
|
unsigned char *bytes = (unsigned char *)&value;
|
|
return _PyLong_FromByteArray(bytes, sizeof(Py_intptr_t),
|
|
little, !is_unsigned);
|
|
}
|
|
}
|
|
|
|
/* Declarations */
|
|
#if CYTHON_CCOMPLEX
|
|
#ifdef __cplusplus
|
|
static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) {
|
|
return ::std::complex< float >(x, y);
|
|
}
|
|
#else
|
|
static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) {
|
|
return x + y*(__pyx_t_float_complex)_Complex_I;
|
|
}
|
|
#endif
|
|
#else
|
|
static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) {
|
|
__pyx_t_float_complex z;
|
|
z.real = x;
|
|
z.imag = y;
|
|
return z;
|
|
}
|
|
#endif
|
|
|
|
/* Arithmetic */
|
|
#if CYTHON_CCOMPLEX
|
|
#else
|
|
static CYTHON_INLINE int __Pyx_c_eq_float(__pyx_t_float_complex a, __pyx_t_float_complex b) {
|
|
return (a.real == b.real) && (a.imag == b.imag);
|
|
}
|
|
static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sum_float(__pyx_t_float_complex a, __pyx_t_float_complex b) {
|
|
__pyx_t_float_complex z;
|
|
z.real = a.real + b.real;
|
|
z.imag = a.imag + b.imag;
|
|
return z;
|
|
}
|
|
static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_diff_float(__pyx_t_float_complex a, __pyx_t_float_complex b) {
|
|
__pyx_t_float_complex z;
|
|
z.real = a.real - b.real;
|
|
z.imag = a.imag - b.imag;
|
|
return z;
|
|
}
|
|
static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_prod_float(__pyx_t_float_complex a, __pyx_t_float_complex b) {
|
|
__pyx_t_float_complex z;
|
|
z.real = a.real * b.real - a.imag * b.imag;
|
|
z.imag = a.real * b.imag + a.imag * b.real;
|
|
return z;
|
|
}
|
|
#if 1
|
|
static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quot_float(__pyx_t_float_complex a, __pyx_t_float_complex b) {
|
|
if (b.imag == 0) {
|
|
return __pyx_t_float_complex_from_parts(a.real / b.real, a.imag / b.real);
|
|
} else if (fabsf(b.real) >= fabsf(b.imag)) {
|
|
if (b.real == 0 && b.imag == 0) {
|
|
return __pyx_t_float_complex_from_parts(a.real / b.real, a.imag / b.imag);
|
|
} else {
|
|
float r = b.imag / b.real;
|
|
float s = (float)(1.0) / (b.real + b.imag * r);
|
|
return __pyx_t_float_complex_from_parts(
|
|
(a.real + a.imag * r) * s, (a.imag - a.real * r) * s);
|
|
}
|
|
} else {
|
|
float r = b.real / b.imag;
|
|
float s = (float)(1.0) / (b.imag + b.real * r);
|
|
return __pyx_t_float_complex_from_parts(
|
|
(a.real * r + a.imag) * s, (a.imag * r - a.real) * s);
|
|
}
|
|
}
|
|
#else
|
|
static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quot_float(__pyx_t_float_complex a, __pyx_t_float_complex b) {
|
|
if (b.imag == 0) {
|
|
return __pyx_t_float_complex_from_parts(a.real / b.real, a.imag / b.real);
|
|
} else {
|
|
float denom = b.real * b.real + b.imag * b.imag;
|
|
return __pyx_t_float_complex_from_parts(
|
|
(a.real * b.real + a.imag * b.imag) / denom,
|
|
(a.imag * b.real - a.real * b.imag) / denom);
|
|
}
|
|
}
|
|
#endif
|
|
static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_neg_float(__pyx_t_float_complex a) {
|
|
__pyx_t_float_complex z;
|
|
z.real = -a.real;
|
|
z.imag = -a.imag;
|
|
return z;
|
|
}
|
|
static CYTHON_INLINE int __Pyx_c_is_zero_float(__pyx_t_float_complex a) {
|
|
return (a.real == 0) && (a.imag == 0);
|
|
}
|
|
static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conj_float(__pyx_t_float_complex a) {
|
|
__pyx_t_float_complex z;
|
|
z.real = a.real;
|
|
z.imag = -a.imag;
|
|
return z;
|
|
}
|
|
#if 1
|
|
static CYTHON_INLINE float __Pyx_c_abs_float(__pyx_t_float_complex z) {
|
|
#if !defined(HAVE_HYPOT) || defined(_MSC_VER)
|
|
return sqrtf(z.real*z.real + z.imag*z.imag);
|
|
#else
|
|
return hypotf(z.real, z.imag);
|
|
#endif
|
|
}
|
|
static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_pow_float(__pyx_t_float_complex a, __pyx_t_float_complex b) {
|
|
__pyx_t_float_complex z;
|
|
float r, lnr, theta, z_r, z_theta;
|
|
if (b.imag == 0 && b.real == (int)b.real) {
|
|
if (b.real < 0) {
|
|
float denom = a.real * a.real + a.imag * a.imag;
|
|
a.real = a.real / denom;
|
|
a.imag = -a.imag / denom;
|
|
b.real = -b.real;
|
|
}
|
|
switch ((int)b.real) {
|
|
case 0:
|
|
z.real = 1;
|
|
z.imag = 0;
|
|
return z;
|
|
case 1:
|
|
return a;
|
|
case 2:
|
|
return __Pyx_c_prod_float(a, a);
|
|
case 3:
|
|
z = __Pyx_c_prod_float(a, a);
|
|
return __Pyx_c_prod_float(z, a);
|
|
case 4:
|
|
z = __Pyx_c_prod_float(a, a);
|
|
return __Pyx_c_prod_float(z, z);
|
|
}
|
|
}
|
|
if (a.imag == 0) {
|
|
if (a.real == 0) {
|
|
return a;
|
|
} else if (b.imag == 0) {
|
|
z.real = powf(a.real, b.real);
|
|
z.imag = 0;
|
|
return z;
|
|
} else if (a.real > 0) {
|
|
r = a.real;
|
|
theta = 0;
|
|
} else {
|
|
r = -a.real;
|
|
theta = atan2f(0.0, -1.0);
|
|
}
|
|
} else {
|
|
r = __Pyx_c_abs_float(a);
|
|
theta = atan2f(a.imag, a.real);
|
|
}
|
|
lnr = logf(r);
|
|
z_r = expf(lnr * b.real - theta * b.imag);
|
|
z_theta = theta * b.real + lnr * b.imag;
|
|
z.real = z_r * cosf(z_theta);
|
|
z.imag = z_r * sinf(z_theta);
|
|
return z;
|
|
}
|
|
#endif
|
|
#endif
|
|
|
|
/* Declarations */
|
|
#if CYTHON_CCOMPLEX
|
|
#ifdef __cplusplus
|
|
static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) {
|
|
return ::std::complex< double >(x, y);
|
|
}
|
|
#else
|
|
static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) {
|
|
return x + y*(__pyx_t_double_complex)_Complex_I;
|
|
}
|
|
#endif
|
|
#else
|
|
static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) {
|
|
__pyx_t_double_complex z;
|
|
z.real = x;
|
|
z.imag = y;
|
|
return z;
|
|
}
|
|
#endif
|
|
|
|
/* Arithmetic */
|
|
#if CYTHON_CCOMPLEX
|
|
#else
|
|
static CYTHON_INLINE int __Pyx_c_eq_double(__pyx_t_double_complex a, __pyx_t_double_complex b) {
|
|
return (a.real == b.real) && (a.imag == b.imag);
|
|
}
|
|
static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum_double(__pyx_t_double_complex a, __pyx_t_double_complex b) {
|
|
__pyx_t_double_complex z;
|
|
z.real = a.real + b.real;
|
|
z.imag = a.imag + b.imag;
|
|
return z;
|
|
}
|
|
static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff_double(__pyx_t_double_complex a, __pyx_t_double_complex b) {
|
|
__pyx_t_double_complex z;
|
|
z.real = a.real - b.real;
|
|
z.imag = a.imag - b.imag;
|
|
return z;
|
|
}
|
|
static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_prod_double(__pyx_t_double_complex a, __pyx_t_double_complex b) {
|
|
__pyx_t_double_complex z;
|
|
z.real = a.real * b.real - a.imag * b.imag;
|
|
z.imag = a.real * b.imag + a.imag * b.real;
|
|
return z;
|
|
}
|
|
#if 1
|
|
static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot_double(__pyx_t_double_complex a, __pyx_t_double_complex b) {
|
|
if (b.imag == 0) {
|
|
return __pyx_t_double_complex_from_parts(a.real / b.real, a.imag / b.real);
|
|
} else if (fabs(b.real) >= fabs(b.imag)) {
|
|
if (b.real == 0 && b.imag == 0) {
|
|
return __pyx_t_double_complex_from_parts(a.real / b.real, a.imag / b.imag);
|
|
} else {
|
|
double r = b.imag / b.real;
|
|
double s = (double)(1.0) / (b.real + b.imag * r);
|
|
return __pyx_t_double_complex_from_parts(
|
|
(a.real + a.imag * r) * s, (a.imag - a.real * r) * s);
|
|
}
|
|
} else {
|
|
double r = b.real / b.imag;
|
|
double s = (double)(1.0) / (b.imag + b.real * r);
|
|
return __pyx_t_double_complex_from_parts(
|
|
(a.real * r + a.imag) * s, (a.imag * r - a.real) * s);
|
|
}
|
|
}
|
|
#else
|
|
static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot_double(__pyx_t_double_complex a, __pyx_t_double_complex b) {
|
|
if (b.imag == 0) {
|
|
return __pyx_t_double_complex_from_parts(a.real / b.real, a.imag / b.real);
|
|
} else {
|
|
double denom = b.real * b.real + b.imag * b.imag;
|
|
return __pyx_t_double_complex_from_parts(
|
|
(a.real * b.real + a.imag * b.imag) / denom,
|
|
(a.imag * b.real - a.real * b.imag) / denom);
|
|
}
|
|
}
|
|
#endif
|
|
static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg_double(__pyx_t_double_complex a) {
|
|
__pyx_t_double_complex z;
|
|
z.real = -a.real;
|
|
z.imag = -a.imag;
|
|
return z;
|
|
}
|
|
static CYTHON_INLINE int __Pyx_c_is_zero_double(__pyx_t_double_complex a) {
|
|
return (a.real == 0) && (a.imag == 0);
|
|
}
|
|
static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj_double(__pyx_t_double_complex a) {
|
|
__pyx_t_double_complex z;
|
|
z.real = a.real;
|
|
z.imag = -a.imag;
|
|
return z;
|
|
}
|
|
#if 1
|
|
static CYTHON_INLINE double __Pyx_c_abs_double(__pyx_t_double_complex z) {
|
|
#if !defined(HAVE_HYPOT) || defined(_MSC_VER)
|
|
return sqrt(z.real*z.real + z.imag*z.imag);
|
|
#else
|
|
return hypot(z.real, z.imag);
|
|
#endif
|
|
}
|
|
static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow_double(__pyx_t_double_complex a, __pyx_t_double_complex b) {
|
|
__pyx_t_double_complex z;
|
|
double r, lnr, theta, z_r, z_theta;
|
|
if (b.imag == 0 && b.real == (int)b.real) {
|
|
if (b.real < 0) {
|
|
double denom = a.real * a.real + a.imag * a.imag;
|
|
a.real = a.real / denom;
|
|
a.imag = -a.imag / denom;
|
|
b.real = -b.real;
|
|
}
|
|
switch ((int)b.real) {
|
|
case 0:
|
|
z.real = 1;
|
|
z.imag = 0;
|
|
return z;
|
|
case 1:
|
|
return a;
|
|
case 2:
|
|
return __Pyx_c_prod_double(a, a);
|
|
case 3:
|
|
z = __Pyx_c_prod_double(a, a);
|
|
return __Pyx_c_prod_double(z, a);
|
|
case 4:
|
|
z = __Pyx_c_prod_double(a, a);
|
|
return __Pyx_c_prod_double(z, z);
|
|
}
|
|
}
|
|
if (a.imag == 0) {
|
|
if (a.real == 0) {
|
|
return a;
|
|
} else if (b.imag == 0) {
|
|
z.real = pow(a.real, b.real);
|
|
z.imag = 0;
|
|
return z;
|
|
} else if (a.real > 0) {
|
|
r = a.real;
|
|
theta = 0;
|
|
} else {
|
|
r = -a.real;
|
|
theta = atan2(0.0, -1.0);
|
|
}
|
|
} else {
|
|
r = __Pyx_c_abs_double(a);
|
|
theta = atan2(a.imag, a.real);
|
|
}
|
|
lnr = log(r);
|
|
z_r = exp(lnr * b.real - theta * b.imag);
|
|
z_theta = theta * b.real + lnr * b.imag;
|
|
z.real = z_r * cos(z_theta);
|
|
z.imag = z_r * sin(z_theta);
|
|
return z;
|
|
}
|
|
#endif
|
|
#endif
|
|
|
|
/* CIntFromPy */
|
|
static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) {
|
|
const int neg_one = (int) ((int) 0 - (int) 1), const_zero = (int) 0;
|
|
const int is_unsigned = neg_one > const_zero;
|
|
#if PY_MAJOR_VERSION < 3
|
|
if (likely(PyInt_Check(x))) {
|
|
if (sizeof(int) < sizeof(long)) {
|
|
__PYX_VERIFY_RETURN_INT(int, long, PyInt_AS_LONG(x))
|
|
} else {
|
|
long val = PyInt_AS_LONG(x);
|
|
if (is_unsigned && unlikely(val < 0)) {
|
|
goto raise_neg_overflow;
|
|
}
|
|
return (int) val;
|
|
}
|
|
} else
|
|
#endif
|
|
if (likely(PyLong_Check(x))) {
|
|
if (is_unsigned) {
|
|
#if CYTHON_USE_PYLONG_INTERNALS
|
|
const digit* digits = ((PyLongObject*)x)->ob_digit;
|
|
switch (Py_SIZE(x)) {
|
|
case 0: return (int) 0;
|
|
case 1: __PYX_VERIFY_RETURN_INT(int, digit, digits[0])
|
|
case 2:
|
|
if (8 * sizeof(int) > 1 * PyLong_SHIFT) {
|
|
if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) {
|
|
__PYX_VERIFY_RETURN_INT(int, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
|
|
} else if (8 * sizeof(int) >= 2 * PyLong_SHIFT) {
|
|
return (int) (((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0]));
|
|
}
|
|
}
|
|
break;
|
|
case 3:
|
|
if (8 * sizeof(int) > 2 * PyLong_SHIFT) {
|
|
if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) {
|
|
__PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
|
|
} else if (8 * sizeof(int) >= 3 * PyLong_SHIFT) {
|
|
return (int) (((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]));
|
|
}
|
|
}
|
|
break;
|
|
case 4:
|
|
if (8 * sizeof(int) > 3 * PyLong_SHIFT) {
|
|
if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) {
|
|
__PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
|
|
} else if (8 * sizeof(int) >= 4 * PyLong_SHIFT) {
|
|
return (int) (((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]));
|
|
}
|
|
}
|
|
break;
|
|
}
|
|
#endif
|
|
#if CYTHON_COMPILING_IN_CPYTHON
|
|
if (unlikely(Py_SIZE(x) < 0)) {
|
|
goto raise_neg_overflow;
|
|
}
|
|
#else
|
|
{
|
|
int result = PyObject_RichCompareBool(x, Py_False, Py_LT);
|
|
if (unlikely(result < 0))
|
|
return (int) -1;
|
|
if (unlikely(result == 1))
|
|
goto raise_neg_overflow;
|
|
}
|
|
#endif
|
|
if (sizeof(int) <= sizeof(unsigned long)) {
|
|
__PYX_VERIFY_RETURN_INT_EXC(int, unsigned long, PyLong_AsUnsignedLong(x))
|
|
#ifdef HAVE_LONG_LONG
|
|
} else if (sizeof(int) <= sizeof(unsigned PY_LONG_LONG)) {
|
|
__PYX_VERIFY_RETURN_INT_EXC(int, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x))
|
|
#endif
|
|
}
|
|
} else {
|
|
#if CYTHON_USE_PYLONG_INTERNALS
|
|
const digit* digits = ((PyLongObject*)x)->ob_digit;
|
|
switch (Py_SIZE(x)) {
|
|
case 0: return (int) 0;
|
|
case -1: __PYX_VERIFY_RETURN_INT(int, sdigit, (sdigit) (-(sdigit)digits[0]))
|
|
case 1: __PYX_VERIFY_RETURN_INT(int, digit, +digits[0])
|
|
case -2:
|
|
if (8 * sizeof(int) - 1 > 1 * PyLong_SHIFT) {
|
|
if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) {
|
|
__PYX_VERIFY_RETURN_INT(int, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
|
|
} else if (8 * sizeof(int) - 1 > 2 * PyLong_SHIFT) {
|
|
return (int) (((int)-1)*(((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0])));
|
|
}
|
|
}
|
|
break;
|
|
case 2:
|
|
if (8 * sizeof(int) > 1 * PyLong_SHIFT) {
|
|
if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) {
|
|
__PYX_VERIFY_RETURN_INT(int, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
|
|
} else if (8 * sizeof(int) - 1 > 2 * PyLong_SHIFT) {
|
|
return (int) ((((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0])));
|
|
}
|
|
}
|
|
break;
|
|
case -3:
|
|
if (8 * sizeof(int) - 1 > 2 * PyLong_SHIFT) {
|
|
if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) {
|
|
__PYX_VERIFY_RETURN_INT(int, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
|
|
} else if (8 * sizeof(int) - 1 > 3 * PyLong_SHIFT) {
|
|
return (int) (((int)-1)*(((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0])));
|
|
}
|
|
}
|
|
break;
|
|
case 3:
|
|
if (8 * sizeof(int) > 2 * PyLong_SHIFT) {
|
|
if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) {
|
|
__PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
|
|
} else if (8 * sizeof(int) - 1 > 3 * PyLong_SHIFT) {
|
|
return (int) ((((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0])));
|
|
}
|
|
}
|
|
break;
|
|
case -4:
|
|
if (8 * sizeof(int) - 1 > 3 * PyLong_SHIFT) {
|
|
if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) {
|
|
__PYX_VERIFY_RETURN_INT(int, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
|
|
} else if (8 * sizeof(int) - 1 > 4 * PyLong_SHIFT) {
|
|
return (int) (((int)-1)*(((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0])));
|
|
}
|
|
}
|
|
break;
|
|
case 4:
|
|
if (8 * sizeof(int) > 3 * PyLong_SHIFT) {
|
|
if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) {
|
|
__PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
|
|
} else if (8 * sizeof(int) - 1 > 4 * PyLong_SHIFT) {
|
|
return (int) ((((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0])));
|
|
}
|
|
}
|
|
break;
|
|
}
|
|
#endif
|
|
if (sizeof(int) <= sizeof(long)) {
|
|
__PYX_VERIFY_RETURN_INT_EXC(int, long, PyLong_AsLong(x))
|
|
#ifdef HAVE_LONG_LONG
|
|
} else if (sizeof(int) <= sizeof(PY_LONG_LONG)) {
|
|
__PYX_VERIFY_RETURN_INT_EXC(int, PY_LONG_LONG, PyLong_AsLongLong(x))
|
|
#endif
|
|
}
|
|
}
|
|
{
|
|
#if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray)
|
|
PyErr_SetString(PyExc_RuntimeError,
|
|
"_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers");
|
|
#else
|
|
int val;
|
|
PyObject *v = __Pyx_PyNumber_IntOrLong(x);
|
|
#if PY_MAJOR_VERSION < 3
|
|
if (likely(v) && !PyLong_Check(v)) {
|
|
PyObject *tmp = v;
|
|
v = PyNumber_Long(tmp);
|
|
Py_DECREF(tmp);
|
|
}
|
|
#endif
|
|
if (likely(v)) {
|
|
int one = 1; int is_little = (int)*(unsigned char *)&one;
|
|
unsigned char *bytes = (unsigned char *)&val;
|
|
int ret = _PyLong_AsByteArray((PyLongObject *)v,
|
|
bytes, sizeof(val),
|
|
is_little, !is_unsigned);
|
|
Py_DECREF(v);
|
|
if (likely(!ret))
|
|
return val;
|
|
}
|
|
#endif
|
|
return (int) -1;
|
|
}
|
|
} else {
|
|
int val;
|
|
PyObject *tmp = __Pyx_PyNumber_IntOrLong(x);
|
|
if (!tmp) return (int) -1;
|
|
val = __Pyx_PyInt_As_int(tmp);
|
|
Py_DECREF(tmp);
|
|
return val;
|
|
}
|
|
raise_overflow:
|
|
PyErr_SetString(PyExc_OverflowError,
|
|
"value too large to convert to int");
|
|
return (int) -1;
|
|
raise_neg_overflow:
|
|
PyErr_SetString(PyExc_OverflowError,
|
|
"can't convert negative value to int");
|
|
return (int) -1;
|
|
}
|
|
|
|
/* CIntFromPy */
|
|
static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) {
|
|
const long neg_one = (long) ((long) 0 - (long) 1), const_zero = (long) 0;
|
|
const int is_unsigned = neg_one > const_zero;
|
|
#if PY_MAJOR_VERSION < 3
|
|
if (likely(PyInt_Check(x))) {
|
|
if (sizeof(long) < sizeof(long)) {
|
|
__PYX_VERIFY_RETURN_INT(long, long, PyInt_AS_LONG(x))
|
|
} else {
|
|
long val = PyInt_AS_LONG(x);
|
|
if (is_unsigned && unlikely(val < 0)) {
|
|
goto raise_neg_overflow;
|
|
}
|
|
return (long) val;
|
|
}
|
|
} else
|
|
#endif
|
|
if (likely(PyLong_Check(x))) {
|
|
if (is_unsigned) {
|
|
#if CYTHON_USE_PYLONG_INTERNALS
|
|
const digit* digits = ((PyLongObject*)x)->ob_digit;
|
|
switch (Py_SIZE(x)) {
|
|
case 0: return (long) 0;
|
|
case 1: __PYX_VERIFY_RETURN_INT(long, digit, digits[0])
|
|
case 2:
|
|
if (8 * sizeof(long) > 1 * PyLong_SHIFT) {
|
|
if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) {
|
|
__PYX_VERIFY_RETURN_INT(long, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
|
|
} else if (8 * sizeof(long) >= 2 * PyLong_SHIFT) {
|
|
return (long) (((((long)digits[1]) << PyLong_SHIFT) | (long)digits[0]));
|
|
}
|
|
}
|
|
break;
|
|
case 3:
|
|
if (8 * sizeof(long) > 2 * PyLong_SHIFT) {
|
|
if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) {
|
|
__PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
|
|
} else if (8 * sizeof(long) >= 3 * PyLong_SHIFT) {
|
|
return (long) (((((((long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]));
|
|
}
|
|
}
|
|
break;
|
|
case 4:
|
|
if (8 * sizeof(long) > 3 * PyLong_SHIFT) {
|
|
if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) {
|
|
__PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
|
|
} else if (8 * sizeof(long) >= 4 * PyLong_SHIFT) {
|
|
return (long) (((((((((long)digits[3]) << PyLong_SHIFT) | (long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]));
|
|
}
|
|
}
|
|
break;
|
|
}
|
|
#endif
|
|
#if CYTHON_COMPILING_IN_CPYTHON
|
|
if (unlikely(Py_SIZE(x) < 0)) {
|
|
goto raise_neg_overflow;
|
|
}
|
|
#else
|
|
{
|
|
int result = PyObject_RichCompareBool(x, Py_False, Py_LT);
|
|
if (unlikely(result < 0))
|
|
return (long) -1;
|
|
if (unlikely(result == 1))
|
|
goto raise_neg_overflow;
|
|
}
|
|
#endif
|
|
if (sizeof(long) <= sizeof(unsigned long)) {
|
|
__PYX_VERIFY_RETURN_INT_EXC(long, unsigned long, PyLong_AsUnsignedLong(x))
|
|
#ifdef HAVE_LONG_LONG
|
|
} else if (sizeof(long) <= sizeof(unsigned PY_LONG_LONG)) {
|
|
__PYX_VERIFY_RETURN_INT_EXC(long, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x))
|
|
#endif
|
|
}
|
|
} else {
|
|
#if CYTHON_USE_PYLONG_INTERNALS
|
|
const digit* digits = ((PyLongObject*)x)->ob_digit;
|
|
switch (Py_SIZE(x)) {
|
|
case 0: return (long) 0;
|
|
case -1: __PYX_VERIFY_RETURN_INT(long, sdigit, (sdigit) (-(sdigit)digits[0]))
|
|
case 1: __PYX_VERIFY_RETURN_INT(long, digit, +digits[0])
|
|
case -2:
|
|
if (8 * sizeof(long) - 1 > 1 * PyLong_SHIFT) {
|
|
if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) {
|
|
__PYX_VERIFY_RETURN_INT(long, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
|
|
} else if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) {
|
|
return (long) (((long)-1)*(((((long)digits[1]) << PyLong_SHIFT) | (long)digits[0])));
|
|
}
|
|
}
|
|
break;
|
|
case 2:
|
|
if (8 * sizeof(long) > 1 * PyLong_SHIFT) {
|
|
if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) {
|
|
__PYX_VERIFY_RETURN_INT(long, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
|
|
} else if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) {
|
|
return (long) ((((((long)digits[1]) << PyLong_SHIFT) | (long)digits[0])));
|
|
}
|
|
}
|
|
break;
|
|
case -3:
|
|
if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) {
|
|
if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) {
|
|
__PYX_VERIFY_RETURN_INT(long, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
|
|
} else if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) {
|
|
return (long) (((long)-1)*(((((((long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0])));
|
|
}
|
|
}
|
|
break;
|
|
case 3:
|
|
if (8 * sizeof(long) > 2 * PyLong_SHIFT) {
|
|
if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) {
|
|
__PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
|
|
} else if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) {
|
|
return (long) ((((((((long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0])));
|
|
}
|
|
}
|
|
break;
|
|
case -4:
|
|
if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) {
|
|
if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) {
|
|
__PYX_VERIFY_RETURN_INT(long, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
|
|
} else if (8 * sizeof(long) - 1 > 4 * PyLong_SHIFT) {
|
|
return (long) (((long)-1)*(((((((((long)digits[3]) << PyLong_SHIFT) | (long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0])));
|
|
}
|
|
}
|
|
break;
|
|
case 4:
|
|
if (8 * sizeof(long) > 3 * PyLong_SHIFT) {
|
|
if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) {
|
|
__PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])))
|
|
} else if (8 * sizeof(long) - 1 > 4 * PyLong_SHIFT) {
|
|
return (long) ((((((((((long)digits[3]) << PyLong_SHIFT) | (long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0])));
|
|
}
|
|
}
|
|
break;
|
|
}
|
|
#endif
|
|
if (sizeof(long) <= sizeof(long)) {
|
|
__PYX_VERIFY_RETURN_INT_EXC(long, long, PyLong_AsLong(x))
|
|
#ifdef HAVE_LONG_LONG
|
|
} else if (sizeof(long) <= sizeof(PY_LONG_LONG)) {
|
|
__PYX_VERIFY_RETURN_INT_EXC(long, PY_LONG_LONG, PyLong_AsLongLong(x))
|
|
#endif
|
|
}
|
|
}
|
|
{
|
|
#if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray)
|
|
PyErr_SetString(PyExc_RuntimeError,
|
|
"_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers");
|
|
#else
|
|
long val;
|
|
PyObject *v = __Pyx_PyNumber_IntOrLong(x);
|
|
#if PY_MAJOR_VERSION < 3
|
|
if (likely(v) && !PyLong_Check(v)) {
|
|
PyObject *tmp = v;
|
|
v = PyNumber_Long(tmp);
|
|
Py_DECREF(tmp);
|
|
}
|
|
#endif
|
|
if (likely(v)) {
|
|
int one = 1; int is_little = (int)*(unsigned char *)&one;
|
|
unsigned char *bytes = (unsigned char *)&val;
|
|
int ret = _PyLong_AsByteArray((PyLongObject *)v,
|
|
bytes, sizeof(val),
|
|
is_little, !is_unsigned);
|
|
Py_DECREF(v);
|
|
if (likely(!ret))
|
|
return val;
|
|
}
|
|
#endif
|
|
return (long) -1;
|
|
}
|
|
} else {
|
|
long val;
|
|
PyObject *tmp = __Pyx_PyNumber_IntOrLong(x);
|
|
if (!tmp) return (long) -1;
|
|
val = __Pyx_PyInt_As_long(tmp);
|
|
Py_DECREF(tmp);
|
|
return val;
|
|
}
|
|
raise_overflow:
|
|
PyErr_SetString(PyExc_OverflowError,
|
|
"value too large to convert to long");
|
|
return (long) -1;
|
|
raise_neg_overflow:
|
|
PyErr_SetString(PyExc_OverflowError,
|
|
"can't convert negative value to long");
|
|
return (long) -1;
|
|
}
|
|
|
|
/* FastTypeChecks */
|
|
#if CYTHON_COMPILING_IN_CPYTHON
|
|
static int __Pyx_InBases(PyTypeObject *a, PyTypeObject *b) {
|
|
while (a) {
|
|
a = a->tp_base;
|
|
if (a == b)
|
|
return 1;
|
|
}
|
|
return b == &PyBaseObject_Type;
|
|
}
|
|
static CYTHON_INLINE int __Pyx_IsSubtype(PyTypeObject *a, PyTypeObject *b) {
|
|
PyObject *mro;
|
|
if (a == b) return 1;
|
|
mro = a->tp_mro;
|
|
if (likely(mro)) {
|
|
Py_ssize_t i, n;
|
|
n = PyTuple_GET_SIZE(mro);
|
|
for (i = 0; i < n; i++) {
|
|
if (PyTuple_GET_ITEM(mro, i) == (PyObject *)b)
|
|
return 1;
|
|
}
|
|
return 0;
|
|
}
|
|
return __Pyx_InBases(a, b);
|
|
}
|
|
#if PY_MAJOR_VERSION == 2
|
|
static int __Pyx_inner_PyErr_GivenExceptionMatches2(PyObject *err, PyObject* exc_type1, PyObject* exc_type2) {
|
|
PyObject *exception, *value, *tb;
|
|
int res;
|
|
__Pyx_PyThreadState_declare
|
|
__Pyx_PyThreadState_assign
|
|
__Pyx_ErrFetch(&exception, &value, &tb);
|
|
res = exc_type1 ? PyObject_IsSubclass(err, exc_type1) : 0;
|
|
if (unlikely(res == -1)) {
|
|
PyErr_WriteUnraisable(err);
|
|
res = 0;
|
|
}
|
|
if (!res) {
|
|
res = PyObject_IsSubclass(err, exc_type2);
|
|
if (unlikely(res == -1)) {
|
|
PyErr_WriteUnraisable(err);
|
|
res = 0;
|
|
}
|
|
}
|
|
__Pyx_ErrRestore(exception, value, tb);
|
|
return res;
|
|
}
|
|
#else
|
|
static CYTHON_INLINE int __Pyx_inner_PyErr_GivenExceptionMatches2(PyObject *err, PyObject* exc_type1, PyObject *exc_type2) {
|
|
int res = exc_type1 ? __Pyx_IsSubtype((PyTypeObject*)err, (PyTypeObject*)exc_type1) : 0;
|
|
if (!res) {
|
|
res = __Pyx_IsSubtype((PyTypeObject*)err, (PyTypeObject*)exc_type2);
|
|
}
|
|
return res;
|
|
}
|
|
#endif
|
|
static int __Pyx_PyErr_GivenExceptionMatchesTuple(PyObject *exc_type, PyObject *tuple) {
|
|
Py_ssize_t i, n;
|
|
assert(PyExceptionClass_Check(exc_type));
|
|
n = PyTuple_GET_SIZE(tuple);
|
|
#if PY_MAJOR_VERSION >= 3
|
|
for (i=0; i<n; i++) {
|
|
if (exc_type == PyTuple_GET_ITEM(tuple, i)) return 1;
|
|
}
|
|
#endif
|
|
for (i=0; i<n; i++) {
|
|
PyObject *t = PyTuple_GET_ITEM(tuple, i);
|
|
#if PY_MAJOR_VERSION < 3
|
|
if (likely(exc_type == t)) return 1;
|
|
#endif
|
|
if (likely(PyExceptionClass_Check(t))) {
|
|
if (__Pyx_inner_PyErr_GivenExceptionMatches2(exc_type, NULL, t)) return 1;
|
|
} else {
|
|
}
|
|
}
|
|
return 0;
|
|
}
|
|
static CYTHON_INLINE int __Pyx_PyErr_GivenExceptionMatches(PyObject *err, PyObject* exc_type) {
|
|
if (likely(err == exc_type)) return 1;
|
|
if (likely(PyExceptionClass_Check(err))) {
|
|
if (likely(PyExceptionClass_Check(exc_type))) {
|
|
return __Pyx_inner_PyErr_GivenExceptionMatches2(err, NULL, exc_type);
|
|
} else if (likely(PyTuple_Check(exc_type))) {
|
|
return __Pyx_PyErr_GivenExceptionMatchesTuple(err, exc_type);
|
|
} else {
|
|
}
|
|
}
|
|
return PyErr_GivenExceptionMatches(err, exc_type);
|
|
}
|
|
static CYTHON_INLINE int __Pyx_PyErr_GivenExceptionMatches2(PyObject *err, PyObject *exc_type1, PyObject *exc_type2) {
|
|
assert(PyExceptionClass_Check(exc_type1));
|
|
assert(PyExceptionClass_Check(exc_type2));
|
|
if (likely(err == exc_type1 || err == exc_type2)) return 1;
|
|
if (likely(PyExceptionClass_Check(err))) {
|
|
return __Pyx_inner_PyErr_GivenExceptionMatches2(err, exc_type1, exc_type2);
|
|
}
|
|
return (PyErr_GivenExceptionMatches(err, exc_type1) || PyErr_GivenExceptionMatches(err, exc_type2));
|
|
}
|
|
#endif
|
|
|
|
/* CheckBinaryVersion */
|
|
static int __Pyx_check_binary_version(void) {
|
|
char ctversion[4], rtversion[4];
|
|
PyOS_snprintf(ctversion, 4, "%d.%d", PY_MAJOR_VERSION, PY_MINOR_VERSION);
|
|
PyOS_snprintf(rtversion, 4, "%s", Py_GetVersion());
|
|
if (ctversion[0] != rtversion[0] || ctversion[2] != rtversion[2]) {
|
|
char message[200];
|
|
PyOS_snprintf(message, sizeof(message),
|
|
"compiletime version %s of module '%.100s' "
|
|
"does not match runtime version %s",
|
|
ctversion, __Pyx_MODULE_NAME, rtversion);
|
|
return PyErr_WarnEx(NULL, message, 1);
|
|
}
|
|
return 0;
|
|
}
|
|
|
|
/* InitStrings */
|
|
static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) {
|
|
while (t->p) {
|
|
#if PY_MAJOR_VERSION < 3
|
|
if (t->is_unicode) {
|
|
*t->p = PyUnicode_DecodeUTF8(t->s, t->n - 1, NULL);
|
|
} else if (t->intern) {
|
|
*t->p = PyString_InternFromString(t->s);
|
|
} else {
|
|
*t->p = PyString_FromStringAndSize(t->s, t->n - 1);
|
|
}
|
|
#else
|
|
if (t->is_unicode | t->is_str) {
|
|
if (t->intern) {
|
|
*t->p = PyUnicode_InternFromString(t->s);
|
|
} else if (t->encoding) {
|
|
*t->p = PyUnicode_Decode(t->s, t->n - 1, t->encoding, NULL);
|
|
} else {
|
|
*t->p = PyUnicode_FromStringAndSize(t->s, t->n - 1);
|
|
}
|
|
} else {
|
|
*t->p = PyBytes_FromStringAndSize(t->s, t->n - 1);
|
|
}
|
|
#endif
|
|
if (!*t->p)
|
|
return -1;
|
|
if (PyObject_Hash(*t->p) == -1)
|
|
return -1;
|
|
++t;
|
|
}
|
|
return 0;
|
|
}
|
|
|
|
static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(const char* c_str) {
|
|
return __Pyx_PyUnicode_FromStringAndSize(c_str, (Py_ssize_t)strlen(c_str));
|
|
}
|
|
static CYTHON_INLINE const char* __Pyx_PyObject_AsString(PyObject* o) {
|
|
Py_ssize_t ignore;
|
|
return __Pyx_PyObject_AsStringAndSize(o, &ignore);
|
|
}
|
|
#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII || __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT
|
|
#if !CYTHON_PEP393_ENABLED
|
|
static const char* __Pyx_PyUnicode_AsStringAndSize(PyObject* o, Py_ssize_t *length) {
|
|
char* defenc_c;
|
|
PyObject* defenc = _PyUnicode_AsDefaultEncodedString(o, NULL);
|
|
if (!defenc) return NULL;
|
|
defenc_c = PyBytes_AS_STRING(defenc);
|
|
#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII
|
|
{
|
|
char* end = defenc_c + PyBytes_GET_SIZE(defenc);
|
|
char* c;
|
|
for (c = defenc_c; c < end; c++) {
|
|
if ((unsigned char) (*c) >= 128) {
|
|
PyUnicode_AsASCIIString(o);
|
|
return NULL;
|
|
}
|
|
}
|
|
}
|
|
#endif
|
|
*length = PyBytes_GET_SIZE(defenc);
|
|
return defenc_c;
|
|
}
|
|
#else
|
|
static CYTHON_INLINE const char* __Pyx_PyUnicode_AsStringAndSize(PyObject* o, Py_ssize_t *length) {
|
|
if (unlikely(__Pyx_PyUnicode_READY(o) == -1)) return NULL;
|
|
#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII
|
|
if (likely(PyUnicode_IS_ASCII(o))) {
|
|
*length = PyUnicode_GET_LENGTH(o);
|
|
return PyUnicode_AsUTF8(o);
|
|
} else {
|
|
PyUnicode_AsASCIIString(o);
|
|
return NULL;
|
|
}
|
|
#else
|
|
return PyUnicode_AsUTF8AndSize(o, length);
|
|
#endif
|
|
}
|
|
#endif
|
|
#endif
|
|
static CYTHON_INLINE const char* __Pyx_PyObject_AsStringAndSize(PyObject* o, Py_ssize_t *length) {
|
|
#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII || __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT
|
|
if (
|
|
#if PY_MAJOR_VERSION < 3 && __PYX_DEFAULT_STRING_ENCODING_IS_ASCII
|
|
__Pyx_sys_getdefaultencoding_not_ascii &&
|
|
#endif
|
|
PyUnicode_Check(o)) {
|
|
return __Pyx_PyUnicode_AsStringAndSize(o, length);
|
|
} else
|
|
#endif
|
|
#if (!CYTHON_COMPILING_IN_PYPY) || (defined(PyByteArray_AS_STRING) && defined(PyByteArray_GET_SIZE))
|
|
if (PyByteArray_Check(o)) {
|
|
*length = PyByteArray_GET_SIZE(o);
|
|
return PyByteArray_AS_STRING(o);
|
|
} else
|
|
#endif
|
|
{
|
|
char* result;
|
|
int r = PyBytes_AsStringAndSize(o, &result, length);
|
|
if (unlikely(r < 0)) {
|
|
return NULL;
|
|
} else {
|
|
return result;
|
|
}
|
|
}
|
|
}
|
|
static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) {
|
|
int is_true = x == Py_True;
|
|
if (is_true | (x == Py_False) | (x == Py_None)) return is_true;
|
|
else return PyObject_IsTrue(x);
|
|
}
|
|
static CYTHON_INLINE int __Pyx_PyObject_IsTrueAndDecref(PyObject* x) {
|
|
int retval;
|
|
if (unlikely(!x)) return -1;
|
|
retval = __Pyx_PyObject_IsTrue(x);
|
|
Py_DECREF(x);
|
|
return retval;
|
|
}
|
|
static PyObject* __Pyx_PyNumber_IntOrLongWrongResultType(PyObject* result, const char* type_name) {
|
|
#if PY_MAJOR_VERSION >= 3
|
|
if (PyLong_Check(result)) {
|
|
if (PyErr_WarnFormat(PyExc_DeprecationWarning, 1,
|
|
"__int__ returned non-int (type %.200s). "
|
|
"The ability to return an instance of a strict subclass of int "
|
|
"is deprecated, and may be removed in a future version of Python.",
|
|
Py_TYPE(result)->tp_name)) {
|
|
Py_DECREF(result);
|
|
return NULL;
|
|
}
|
|
return result;
|
|
}
|
|
#endif
|
|
PyErr_Format(PyExc_TypeError,
|
|
"__%.4s__ returned non-%.4s (type %.200s)",
|
|
type_name, type_name, Py_TYPE(result)->tp_name);
|
|
Py_DECREF(result);
|
|
return NULL;
|
|
}
|
|
static CYTHON_INLINE PyObject* __Pyx_PyNumber_IntOrLong(PyObject* x) {
|
|
#if CYTHON_USE_TYPE_SLOTS
|
|
PyNumberMethods *m;
|
|
#endif
|
|
const char *name = NULL;
|
|
PyObject *res = NULL;
|
|
#if PY_MAJOR_VERSION < 3
|
|
if (likely(PyInt_Check(x) || PyLong_Check(x)))
|
|
#else
|
|
if (likely(PyLong_Check(x)))
|
|
#endif
|
|
return __Pyx_NewRef(x);
|
|
#if CYTHON_USE_TYPE_SLOTS
|
|
m = Py_TYPE(x)->tp_as_number;
|
|
#if PY_MAJOR_VERSION < 3
|
|
if (m && m->nb_int) {
|
|
name = "int";
|
|
res = m->nb_int(x);
|
|
}
|
|
else if (m && m->nb_long) {
|
|
name = "long";
|
|
res = m->nb_long(x);
|
|
}
|
|
#else
|
|
if (likely(m && m->nb_int)) {
|
|
name = "int";
|
|
res = m->nb_int(x);
|
|
}
|
|
#endif
|
|
#else
|
|
if (!PyBytes_CheckExact(x) && !PyUnicode_CheckExact(x)) {
|
|
res = PyNumber_Int(x);
|
|
}
|
|
#endif
|
|
if (likely(res)) {
|
|
#if PY_MAJOR_VERSION < 3
|
|
if (unlikely(!PyInt_Check(res) && !PyLong_Check(res))) {
|
|
#else
|
|
if (unlikely(!PyLong_CheckExact(res))) {
|
|
#endif
|
|
return __Pyx_PyNumber_IntOrLongWrongResultType(res, name);
|
|
}
|
|
}
|
|
else if (!PyErr_Occurred()) {
|
|
PyErr_SetString(PyExc_TypeError,
|
|
"an integer is required");
|
|
}
|
|
return res;
|
|
}
|
|
static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) {
|
|
Py_ssize_t ival;
|
|
PyObject *x;
|
|
#if PY_MAJOR_VERSION < 3
|
|
if (likely(PyInt_CheckExact(b))) {
|
|
if (sizeof(Py_ssize_t) >= sizeof(long))
|
|
return PyInt_AS_LONG(b);
|
|
else
|
|
return PyInt_AsSsize_t(b);
|
|
}
|
|
#endif
|
|
if (likely(PyLong_CheckExact(b))) {
|
|
#if CYTHON_USE_PYLONG_INTERNALS
|
|
const digit* digits = ((PyLongObject*)b)->ob_digit;
|
|
const Py_ssize_t size = Py_SIZE(b);
|
|
if (likely(__Pyx_sst_abs(size) <= 1)) {
|
|
ival = likely(size) ? digits[0] : 0;
|
|
if (size == -1) ival = -ival;
|
|
return ival;
|
|
} else {
|
|
switch (size) {
|
|
case 2:
|
|
if (8 * sizeof(Py_ssize_t) > 2 * PyLong_SHIFT) {
|
|
return (Py_ssize_t) (((((size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0]));
|
|
}
|
|
break;
|
|
case -2:
|
|
if (8 * sizeof(Py_ssize_t) > 2 * PyLong_SHIFT) {
|
|
return -(Py_ssize_t) (((((size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0]));
|
|
}
|
|
break;
|
|
case 3:
|
|
if (8 * sizeof(Py_ssize_t) > 3 * PyLong_SHIFT) {
|
|
return (Py_ssize_t) (((((((size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0]));
|
|
}
|
|
break;
|
|
case -3:
|
|
if (8 * sizeof(Py_ssize_t) > 3 * PyLong_SHIFT) {
|
|
return -(Py_ssize_t) (((((((size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0]));
|
|
}
|
|
break;
|
|
case 4:
|
|
if (8 * sizeof(Py_ssize_t) > 4 * PyLong_SHIFT) {
|
|
return (Py_ssize_t) (((((((((size_t)digits[3]) << PyLong_SHIFT) | (size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0]));
|
|
}
|
|
break;
|
|
case -4:
|
|
if (8 * sizeof(Py_ssize_t) > 4 * PyLong_SHIFT) {
|
|
return -(Py_ssize_t) (((((((((size_t)digits[3]) << PyLong_SHIFT) | (size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0]));
|
|
}
|
|
break;
|
|
}
|
|
}
|
|
#endif
|
|
return PyLong_AsSsize_t(b);
|
|
}
|
|
x = PyNumber_Index(b);
|
|
if (!x) return -1;
|
|
ival = PyInt_AsSsize_t(x);
|
|
Py_DECREF(x);
|
|
return ival;
|
|
}
|
|
static CYTHON_INLINE PyObject * __Pyx_PyBool_FromLong(long b) {
|
|
return b ? __Pyx_NewRef(Py_True) : __Pyx_NewRef(Py_False);
|
|
}
|
|
static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) {
|
|
return PyInt_FromSize_t(ival);
|
|
}
|
|
|
|
|
|
#endif /* Py_PYTHON_H */
|