--- id: "implement-lfm-kernel-core" title: "Implement core LFM kernel functionality" status: "In Progress" priority: "High" created: "2025-08-15" last_updated: "2025-08-15" owner: "Neil Lawrence" github_issue: "" dependencies: "design-modern-lfm-kernel" tags: - lfm - kernel - implementation - core --- # Implement core LFM kernel functionality ## Description Implement the core LFM kernel class with basic functionality including kernel computation, parameter handling, and gradient computation. ## Background - Design phase completed with modern LFM kernel architecture - Need to implement the core kernel computation methods - Should follow the mathematical foundations from the papers and MATLAB implementation ## Implementation Tasks - [x] Create test specification for `GPy.kern.LFM1` and `GPy.kern.LFM2` classes (test-driven design) - [ ] Create `GPy.kern.LFM1` class inheriting from appropriate base class - [ ] Create `GPy.kern.LFM2` class inheriting from appropriate base class - [ ] Implement parameter handling for mass, damper, spring, sensitivity, delay - [ ] Implement `K()` method for kernel matrix computation - [ ] Implement `Kdiag()` method for diagonal computation - [ ] Add parameter constraints and transformations - [ ] Implement basic gradient computation - [ ] Add support for different base kernels for latent functions ## Core Methods to Implement - [ ] `__init__()` - Parameter initialization and validation (LFM1 and LFM2) - [ ] `K(X, X2=None)` - Kernel matrix computation (LFM1 and LFM2) - [ ] `Kdiag(X)` - Diagonal computation (LFM1 and LFM2) - [ ] `update_gradients_full()` - Gradient computation (LFM1 and LFM2) - [ ] `update_gradients_diag()` - Diagonal gradient computation (LFM1 and LFM2) - [ ] `parameters_changed()` - Parameter update handling (LFM1 and LFM2) ## Acceptance Criteria - [ ] Core LFM kernel class implemented and functional - [ ] Basic kernel computation working correctly - [ ] Parameter handling and constraints implemented - [ ] Gradient computation implemented - [ ] Unit tests passing for core functionality - [ ] Integration with GPy's parameterization system ## Implementation Notes - Follow the mathematical structure from the MATLAB implementation - Use GPy's parameterization system for constraints - Implement efficient computation methods - Ensure proper handling of edge cases and numerical stability - Add comprehensive docstrings and documentation ## Related - CIP: 0001 (LFM kernel implementation) - Backlog: design-modern-lfm-kernel - Papers: Álvarez et al. (2009, 2012) ## Progress Updates ### 2025-08-15 Implementation task started after completion of test-driven design: - Design phase completed with comprehensive test suite - Test specification defines expected API and behavior - Ready to implement LFM1 and LFM2 kernel classes - Test framework validated and working correctly