# Copyright (c) 2012, 2013 GPy authors (see AUTHORS.txt). # Licensed under the BSD 3-clause license (see LICENSE.txt) import unittest import numpy as np import GPy class MappingGradChecker(GPy.core.Model): """ This class has everything we need to check the gradient of a mapping. It implement a simple likelihood which is a weighted sum of the outputs of the mapping. the gradients are checked against the parameters of the mapping and the input. """ def __init__(self, mapping, X, name='map_grad_check'): super(MappingGradChecker, self).__init__(name) self.mapping = mapping self.link_parameter(self.mapping) self.X = GPy.core.Param('X',X) self.link_parameter(self.X) self.dL_dY = np.random.randn(self.X.shape[0], self.mapping.output_dim) def log_likelihood(self): return np.sum(self.mapping.f(self.X) * self.dL_dY) def parameters_changed(self): self.X.gradient = self.mapping.gradients_X(self.dL_dY, self.X) self.mapping.update_gradients(self.dL_dY, self.X) class MappingTests(unittest.TestCase): def test_kernelmapping(self): X = np.random.randn(100,3) Z = np.random.randn(10,3) mapping = GPy.mappings.Kernel(3, 2, Z, GPy.kern.RBF(3)) self.assertTrue(MappingGradChecker(mapping, X).checkgrad()) def test_linearmapping(self): mapping = GPy.mappings.Linear(3, 2) X = np.random.randn(100,3) self.assertTrue(MappingGradChecker(mapping, X).checkgrad()) def test_mlpmapping(self): mapping = GPy.mappings.MLP(input_dim=3, hidden_dim=5, output_dim=2) X = np.random.randn(100,3) self.assertTrue(MappingGradChecker(mapping, X).checkgrad()) def test_addmapping(self): m1 = GPy.mappings.MLP(input_dim=3, hidden_dim=5, output_dim=2) m2 = GPy.mappings.Linear(input_dim=3, output_dim=2) mapping = GPy.mappings.Additive(m1, m2) X = np.random.randn(100,3) self.assertTrue(MappingGradChecker(mapping, X).checkgrad()) def test_compoundmapping(self): m1 = GPy.mappings.MLP(input_dim=3, hidden_dim=5, output_dim=2) Z = np.random.randn(10,2) m2 = GPy.mappings.Kernel(2, 4, Z, GPy.kern.RBF(2)) mapping = GPy.mappings.Compound(m1, m2) X = np.random.randn(100,3) self.assertTrue(MappingGradChecker(mapping, X).checkgrad()) if __name__ == "__main__": print("Running unit tests, please be (very) patient...") unittest.main()