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[verbose optimization] added automatic detection of ipython notebook support, this is experimental

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mzwiessele 2015-02-26 13:52:20 +00:00
parent fc4b38fe59
commit f1e7760403
2 changed files with 11 additions and 15 deletions
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13
GPy/core/model.py
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@ -213,7 +213,7 @@ class Model(Parameterized):
self.obj_grads = np.clip(self._transform_gradients(self.objective_function_gradients()), -1e10, 1e10) self.obj_grads = np.clip(self._transform_gradients(self.objective_function_gradients()), -1e10, 1e10)
return obj_f, self.obj_grads return obj_f, self.obj_grads
def optimize(self, optimizer=None, start=None, messages=False, max_iters=1000, ipython_notebook=False, **kwargs): def optimize(self, optimizer=None, start=None, messages=False, max_iters=1000, ipython_notebook=True, **kwargs):
""" """
Optimize the model using self.log_likelihood and self.log_likelihood_gradient, as well as self.priors. Optimize the model using self.log_likelihood and self.log_likelihood_gradient, as well as self.priors.
@ -255,16 +255,7 @@ class Model(Parameterized):
else: else:
optimizer = optimization.get_optimizer(optimizer) optimizer = optimization.get_optimizer(optimizer)
opt = optimizer(start, model=self, max_iters=max_iters, **kwargs) opt = optimizer(start, model=self, max_iters=max_iters, **kwargs)
try:
from IPython.display import display
from IPython.html import widgets
display(widgets.TextWidget())
ipython_notebook = True
except:
# Not in Ipython notebook
ipython_notebook = False
with VerboseOptimization(self, opt, maxiters=max_iters, verbose=messages, ipython_notebook=ipython_notebook) as vo: with VerboseOptimization(self, opt, maxiters=max_iters, verbose=messages, ipython_notebook=ipython_notebook) as vo:
opt.run(f_fp=self._objective_grads, f=self._objective, fp=self._grads) opt.run(f_fp=self._objective_grads, f=self._objective, fp=self._grads)
vo.finish(opt) vo.finish(opt)

13
GPy/core/verbose_optimization.py
View file

@ -11,9 +11,8 @@ def exponents(fnow, current_grad):
return np.sign(exps) * np.log10(exps).astype(int) return np.sign(exps) * np.log10(exps).astype(int)
class VerboseOptimization(object): class VerboseOptimization(object):
def __init__(self, model, opt, maxiters, verbose=True, current_iteration=0, ipython_notebook=False): def __init__(self, model, opt, maxiters, verbose=False, current_iteration=0, ipython_notebook=True):
self.verbose = verbose self.verbose = verbose
self.ipython_notebook = ipython_notebook
if self.verbose: if self.verbose:
self.model = model self.model = model
self.iteration = current_iteration self.iteration = current_iteration
@ -26,13 +25,18 @@ class VerboseOptimization(object):
self.update() self.update()
if self.ipython_notebook: try:
from IPython.display import display from IPython.display import display
from IPython.html.widgets import FloatProgressWidget, HTMLWidget, ContainerWidget from IPython.html.widgets import FloatProgressWidget, HTMLWidget, ContainerWidget
self.text = HTMLWidget() self.text = HTMLWidget()
self.progress = FloatProgressWidget() self.progress = FloatProgressWidget()
self.model_show = HTMLWidget() self.model_show = HTMLWidget()
self.ipython_notebook = ipython_notebook
except:
# Not in Ipython notebook
self.ipython_notebook = False
if self.ipython_notebook:
self.text.set_css('width', '100%') self.text.set_css('width', '100%')
#self.progress.set_css('width', '100%') #self.progress.set_css('width', '100%')
@ -140,6 +144,7 @@ class VerboseOptimization(object):
self.print_out() self.print_out()
if not self.ipython_notebook: if not self.ipython_notebook:
print print ''
print 'Optimization finished in {0:.5g} Seconds'.format(self.stop-self.start) print 'Optimization finished in {0:.5g} Seconds'.format(self.stop-self.start)
print 'Optimization status: {0:.5g}'.format(self.status)
print print