From de801c9d291df158a5dc77ec4336563a534c1a7d Mon Sep 17 00:00:00 2001 From: Max Zwiessele Date: Thu, 9 Oct 2014 10:32:32 +0100 Subject: [PATCH] [datasets] updated deng loading pandas bugs... --- GPy/util/datasets.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/GPy/util/datasets.py b/GPy/util/datasets.py index 0f63a353..c14ce66f 100644 --- a/GPy/util/datasets.py +++ b/GPy/util/datasets.py @@ -978,7 +978,7 @@ def singlecell_rna_seq_deng(dataset='singlecell_deng'): sample_info.columns = sample_info.columns.to_series().apply(lambda row: row[len("!Sample_"):]) sample_info.columns.name = sample_info.columns.name[len("!Sample_"):] sample_info = sample_info[['geo_accession', 'characteristics_ch1', 'description']] - sample_info = sample_info.ix[:, np.r_[0:3, 5:sample_info.shape[1]]] + sample_info = sample_info.iloc[:, np.r_[0:4, 5:sample_info.shape[1]]] c = sample_info.columns.to_series() c[1:4] = ['strain', 'cross', 'developmental_stage'] sample_info.columns = c