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New data sets

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Neil Lawrence 2014-05-24 15:31:42 +01:00
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GPy/util/data_resources.json
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@ -123,11 +123,39 @@
]
],
"license": null,
"size": 0,
"size": 20258,
"urls": [
"http://staffwww.dcs.shef.ac.uk/people/N.Lawrence/dataset_mirror/drosophila_protein/"
]
},
"spellman_yeast": {
"citation": "Paul T. Spellman, Gavin Sherlock, Michael Q. Zhang, Vishwanath R. Iyer, Kirk Anders, Michael B. Eisen, Patrick O. Brown, David Botstein, and Bruce Futcher 'Comprehensive Identification of Cell Cycle-regulated Genes of the Yeast Saccharomyces cerevisiae by Microarray Hybridization.' Molecular Biology of the Cell 9, 3273-3297",
"details": "Two colour spotted cDNA array data set of a series of experiments to identify which genes in Yeast are cell cycle regulated.",
"files": [
[
"combined.txt"
]
],
"license": null,
"size": 2510955,
"urls": [
"http://genome-www.stanford.edu/cellcycle/data/rawdata/"
]
},
"lee_yeast_ChIP": {
"citation": "Tong Ihn Lee, Nicola J. Rinaldi, Francois Robert, Duncan T. Odom, Ziv Bar-Joseph, Georg K. Gerber, Nancy M. Hannett, Christopher T. Harbison, Craig M. Thompson, Itamar Simon, Julia Zeitlinger, Ezra G. Jennings, Heather L. Murray, D. Benjamin Gordon, Bing Ren, John J. Wyrick, Jean-Bosco Tagne, Thomas L. Volkert, Ernest Fraenkel, David K. Gifford, Richard A. Young 'Transcriptional Regulatory Networks in Saccharomyces cerevisiae' Science 298 (5594) pg 799--804. DOI: 10.1126/science.1075090",
"details": "Binding location analysis for 106 regulators in yeast. The data consists of p-values for binding of regulators to genes derived from ChIP-chip experiments.",
"files": [
[
"binding_by_gene.tsv"
]
],
"license": null,
"size": 1674161,
"urls": [
"http://jura.wi.mit.edu/young_public/regulatory_network/"
]
},
"epomeo_gpx": {
"citation": "",
"details": "Five different GPS traces of the same run up Mount Epomeo in Ischia. The traces are from different sources. endomondo_1 and endomondo_2 are traces from the mobile phone app Endomondo, with a split in the middle. garmin_watch_via_endomondo is the trace from a Garmin watch, with a segment missing about 4 kilometers in. viewranger_phone and viewranger_tablet are traces from a phone and a tablet through the viewranger app. The viewranger_phone data comes from the same mobile phone as the Endomondo data (i.e. there are 3 GPS devices, but one device recorded two traces).",