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Merge pull request #433 from SheffieldML/update_initialize_paramz

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[init] updated readme
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Max Zwiessele 2016-08-26 13:27:38 +01:00 • committed by GitHub
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11
README.md
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@ -130,12 +130,15 @@ m.optimize()
np.save('model_save.npy', m.param_array) np.save('model_save.npy', m.param_array)
# 2: loading a model # 2: loading a model
# Model creation, without initialization: # Model creation, without initialization:
m = GPy.models(GPRegression(X,Y,initialize=False) m_load = GPy.models.GPRegression(X, Y, initialize=False)
m[:] = np.load('model_save.npy') m_load.update_model(False) # do not call the underlying expensive algebra on load
m.initialize_parameter() m_load.initialize_parameter() # Initialize the parameters (connect the parameters up)
print m m_load[:] = np.load('model_save.npy') # Load the parameters
m_load.update_model(True) # Call the algebra only once
print(m_load)
``` ```
## Running unit tests: ## Running unit tests:
Ensure nose is installed via pip: Ensure nose is installed via pip:

2
setup.py
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@ -148,7 +148,7 @@ setup(name = 'GPy',
include_package_data = True, include_package_data = True,
py_modules = ['GPy.__init__'], py_modules = ['GPy.__init__'],
test_suite = 'GPy.testing', test_suite = 'GPy.testing',
install_requires = ['numpy>=1.7', 'scipy>=0.16', 'six', 'paramz>=0.6.6'], install_requires = ['numpy>=1.7', 'scipy>=0.16', 'six', 'paramz>=0.6.8'],
extras_require = {'docs':['sphinx'], extras_require = {'docs':['sphinx'],
'optional':['mpi4py', 'optional':['mpi4py',
'ipython>=4.0.0', 'ipython>=4.0.0',