apunkt/GPy
1
0
Fork 0
mirror of https://github.com/SheffieldML/GPy.git synced 2026-05-24 14:15:14 +02:00
Code Issues Projects Releases Packages Wiki Activity Actions

model re compilation added

Browse source
This commit is contained in:
Max Zwiessele 2013-04-29 16:21:38 +01:00
parent 50a68e1a65
commit aaaa1b5251
1 changed files with 95 additions and 93 deletions
Download patch file Download diff file Expand all files Collapse all files

26
GPy/core/model.py
View file

@ -2,17 +2,19 @@
# Licensed under the BSD 3-clause license (see LICENSE.txt) # Licensed under the BSD 3-clause license (see LICENSE.txt)
import numpy as np
from scipy import optimize
import sys, pdb
import multiprocessing as mp
from GPy.util.misc import opt_wrapper
#import numdifftools as ndt
from parameterised import parameterised, truncate_pad
import priors
from ..util.linalg import jitchol
from ..inference import optimization
from .. import likelihoods from .. import likelihoods
from ..inference import optimization
from ..util.linalg import jitchol
from GPy.util.misc import opt_wrapper
from parameterised import parameterised, truncate_pad
from scipy import optimize
import multiprocessing as mp
import numpy as np
import priors
import re
import sys
import pdb
# import numdifftools as ndt
class model(parameterised): class model(parameterised):
def __init__(self): def __init__(self):
@ -214,9 +216,9 @@ class model(parameterised):
for s in positive_strings: for s in positive_strings:
for i in self.grep_param_names(s): for i in self.grep_param_names(s):
if not (i in currently_constrained): if not (i in currently_constrained):
to_make_positive.append(param_names[i]) to_make_positive.append(re.escape(param_names[i]))
if warn: if warn:
print "Warning! constraining %s postive"%name print "Warning! constraining %s positive" % s
if len(to_make_positive): if len(to_make_positive):
self.constrain_positive('(' + '|'.join(to_make_positive) + ')') self.constrain_positive('(' + '|'.join(to_make_positive) + ')')