diff --git a/GPy/examples/dimensionality_reduction.py b/GPy/examples/dimensionality_reduction.py index cdd69ab5..0155ff94 100644 --- a/GPy/examples/dimensionality_reduction.py +++ b/GPy/examples/dimensionality_reduction.py @@ -165,19 +165,14 @@ def BGPLVM_oil(optimize=True, N=200, Q=7, num_inducing=40, max_iters=1000, plot= # optimize if optimize: - m.constrain_fixed('noise') - m.optimize('scg', messages=1, max_iters=200, gtol=.05) - m.constrain_positive('noise') - m.constrain_bounded('white', 1e-7, 1) m.optimize('scg', messages=1, max_iters=max_iters, gtol=.05) if plot: y = m.likelihood.Y[0, :] fig, (latent_axes, sense_axes) = plt.subplots(1, 2) - plt.sca(latent_axes) - m.plot_latent() + m.plot_latent(ax=latent_axes) data_show = GPy.util.visualize.vector_show(y) - lvm_visualizer = GPy.util.visualize.lvm_dimselect(m.X[0, :], m, data_show, latent_axes=latent_axes) # , sense_axes=sense_axes) + lvm_visualizer = GPy.util.visualize.lvm_dimselect(m.X[0, :], m, data_show, latent_axes=latent_axes, sense_axes=sense_axes) raw_input('Press enter to finish') plt.close(fig) return m