added copyright notice and license at the top

GPy/__init__.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 import kern
 import models
 import inference

GPy/core/__init__.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 from model import *
 from parameterised import *
 import priors

GPy/core/model.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 import numpy as np
 from scipy import optimize
 import sys, pdb

GPy/core/parameterised.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 import numpy as np
 import re
 import copy

GPy/core/priors.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 import numpy as np
 import pylab as pb
 from scipy.special import gammaln, digamma

GPy/examples/GPLVM_demo.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 import numpy as np
 import pylab as pb
 import GPy

GPy/examples/GP_regression_demo.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 """
 Simple Gaussian Processes regression with an RBF kernel
 """

GPy/examples/GP_regression_kern_demo.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 """
 Simple one-dimensional Gaussian Processes with assorted kernel functions
 """

GPy/examples/classification.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 """
 Simple Gaussian Processes classification
 """

GPy/examples/oil_flow_demo.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 import cPickle as pickle
 import numpy as np
 import pylab as pb

GPy/examples/regression.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 """
 Gaussian Processes regression examples
 """

GPy/examples/sparse_GPLVM_demo.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 import numpy as np
 import pylab as pb
 import GPy

GPy/examples/sparse_GP_regression_demo.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 import numpy as np
 """
 Sparse Gaussian Processes regression with an RBF kernel

GPy/examples/warped_GP_demo.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 import numpy as np
 import scipy as sp
 import pdb, sys, pickle

GPy/inference/Expectation_Propagation.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 import numpy as np
 import random
 from scipy import stats, linalg

GPy/inference/likelihoods.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 import numpy as np
 from scipy import stats
 import scipy as sp

GPy/inference/optimization.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 from scipy import optimize
 # import rasmussens_minimize as rasm
 import pdb

GPy/inference/samplers.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 import numpy as np
 from scipy import linalg, optimize
 import pylab as pb

GPy/kern/Brownian.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 from kernpart import kernpart
 import numpy as np
 

GPy/kern/DelayedDecorator.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 from new import instancemethod
 #this is here so that we can have nice syntatic sugar when taking gradients
 # See the transform_gradients decorator in kern

GPy/kern/Matern32.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 from kernpart import kernpart
 import numpy as np
 import hashlib

GPy/kern/Matern52.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 from kernpart import kernpart
 import numpy as np
 import hashlib

GPy/kern/__init__.py

@@ -1,2 +1,6 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 from constructors import rbf, Matern32, Matern52, exponential, linear, white, bias, finite_dimensional, rbf_ARD, spline, Brownian, linear_ARD
 from kern import kern

GPy/kern/bias.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 from kernpart import kernpart
 import numpy as np
 import hashlib

GPy/kern/constructors.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 import numpy as np
 from kern import kern
 

GPy/kern/exponential.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 from kernpart import kernpart
 import numpy as np
 import hashlib

GPy/kern/finite_dimensional.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 from kernpart import kernpart
 import numpy as np
 from ..util.linalg import pdinv,mdot

GPy/kern/kern.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 import numpy as np
 from ..core.parameterised import parameterised
 from DelayedDecorator import DelayedDecorator

GPy/kern/kernpart.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 class kernpart(object):
     def __init__(self,D):
         """

GPy/kern/linear.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 from kernpart import kernpart
 import numpy as np
 class linear(kernpart):

GPy/kern/linear_ARD.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 from kernpart import kernpart
 import numpy as np
 

GPy/kern/rbf.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 from kernpart import kernpart
 import numpy as np
 import hashlib

GPy/kern/rbf_ARD.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 from kernpart import kernpart
 import numpy as np
 import hashlib

GPy/kern/spline.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 from kernpart import kernpart
 import numpy as np
 import hashlib

GPy/kern/white.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 from kernpart import kernpart
 import numpy as np
 class white(kernpart):

GPy/models/GPLVM.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 import numpy as np
 import pylab as pb
 import sys, pdb

GPy/models/GP_EP.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 import numpy as np
 import pylab as pb
 from scipy import stats, linalg

GPy/models/GP_regression.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 import numpy as np
 import pylab as pb
 from .. import kern

GPy/models/__init__.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 from GP_regression import GP_regression
 from sparse_GP_regression import sparse_GP_regression
 from GPLVM import GPLVM

GPy/models/generalized_FITC.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 import numpy as np
 import pylab as pb
 from scipy import stats, linalg

GPy/models/sparse_GPLVM.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 import numpy as np
 import pylab as pb
 import sys, pdb

GPy/models/sparse_GP_regression.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 import numpy as np
 import pylab as pb
 from ..util.linalg import mdot, jitchol, chol_inv, pdinv

GPy/models/warped_GP.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 import numpy as np
 from .. import kern
 from ..core import model

GPy/testing/unit_tests.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 import unittest
 import numpy as np
 import GPy

GPy/util/Tango.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 import matplotlib as mpl
 
 import pylab as pb

GPy/util/__init__.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 import linalg
 import misc
 import plot

GPy/util/linalg.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 import numpy as np
 from scipy import linalg, optimize
 import pylab as pb

GPy/util/misc.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 import numpy as np
 
 def linear_grid(D, n = 100, min_max = (-100, 100)):

GPy/util/plot.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 import Tango
 import pylab as pb
 import numpy as np

GPy/util/squashers.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 import numpy as np
 
 def sigmoid(x):

GPy/util/warping_functions.py

@@ -1,3 +1,7 @@
+# Copyright (c) 2012, GPy authors (see AUTHORS.txt).
+# Licensed under the BSD 3-clause license (see LICENSE.txt)
+
+
 import numpy as np
 import scipy as sp
 import pylab as plt