diff --git a/doc/source/GPy.plotting.gpy_plot.rst b/doc/source/GPy.plotting.gpy_plot.rst new file mode 100644 index 00000000..8391cd3a --- /dev/null +++ b/doc/source/GPy.plotting.gpy_plot.rst @@ -0,0 +1,62 @@ +GPy.plotting.gpy_plot package +============================= + +Submodules +---------- + +GPy.plotting.gpy_plot.data_plots module +--------------------------------------- + +.. automodule:: GPy.plotting.gpy_plot.data_plots + :members: + :undoc-members: + :show-inheritance: + +GPy.plotting.gpy_plot.gp_plots module +------------------------------------- + +.. automodule:: GPy.plotting.gpy_plot.gp_plots + :members: + :undoc-members: + :show-inheritance: + +GPy.plotting.gpy_plot.inference_plots module +-------------------------------------------- + +.. automodule:: GPy.plotting.gpy_plot.inference_plots + :members: + :undoc-members: + :show-inheritance: + +GPy.plotting.gpy_plot.kernel_plots module +----------------------------------------- + +.. automodule:: GPy.plotting.gpy_plot.kernel_plots + :members: + :undoc-members: + :show-inheritance: + +GPy.plotting.gpy_plot.latent_plots module +----------------------------------------- + +.. automodule:: GPy.plotting.gpy_plot.latent_plots + :members: + :undoc-members: + :show-inheritance: + +GPy.plotting.gpy_plot.plot_util module +-------------------------------------- + +.. automodule:: GPy.plotting.gpy_plot.plot_util + :members: + :undoc-members: + :show-inheritance: + + +Module contents +--------------- + +.. automodule:: GPy.plotting.gpy_plot + :members: + :undoc-members: + :show-inheritance: diff --git a/doc/source/GPy.plotting.matplot_dep.controllers.rst b/doc/source/GPy.plotting.matplot_dep.controllers.rst new file mode 100644 index 00000000..239f8e79 --- /dev/null +++ b/doc/source/GPy.plotting.matplot_dep.controllers.rst @@ -0,0 +1,30 @@ +GPy.plotting.matplot_dep.controllers package +============================================ + +Submodules +---------- + +GPy.plotting.matplot_dep.controllers.axis_event_controller module +----------------------------------------------------------------- + +.. automodule:: GPy.plotting.matplot_dep.controllers.axis_event_controller + :members: + :undoc-members: + :show-inheritance: + +GPy.plotting.matplot_dep.controllers.imshow_controller module +------------------------------------------------------------- + +.. automodule:: GPy.plotting.matplot_dep.controllers.imshow_controller + :members: + :undoc-members: + :show-inheritance: + + +Module contents +--------------- + +.. automodule:: GPy.plotting.matplot_dep.controllers + :members: + :undoc-members: + :show-inheritance: diff --git a/doc/source/GPy.plotting.matplot_dep.latent_space_visualizations.controllers.rst b/doc/source/GPy.plotting.matplot_dep.latent_space_visualizations.controllers.rst deleted file mode 100644 index 71826ed6..00000000 --- a/doc/source/GPy.plotting.matplot_dep.latent_space_visualizations.controllers.rst +++ /dev/null @@ -1,30 +0,0 @@ -GPy.plotting.matplot_dep.latent_space_visualizations.controllers package -======================================================================== - -Submodules ----------- - -GPy.plotting.matplot_dep.latent_space_visualizations.controllers.axis_event_controller module ---------------------------------------------------------------------------------------------- - -.. automodule:: GPy.plotting.matplot_dep.latent_space_visualizations.controllers.axis_event_controller - :members: - :undoc-members: - :show-inheritance: - -GPy.plotting.matplot_dep.latent_space_visualizations.controllers.imshow_controller module ------------------------------------------------------------------------------------------ - -.. automodule:: GPy.plotting.matplot_dep.latent_space_visualizations.controllers.imshow_controller - :members: - :undoc-members: - :show-inheritance: - - -Module contents ---------------- - -.. automodule:: GPy.plotting.matplot_dep.latent_space_visualizations.controllers - :members: - :undoc-members: - :show-inheritance: diff --git a/doc/source/GPy.plotting.matplot_dep.latent_space_visualizations.rst b/doc/source/GPy.plotting.matplot_dep.latent_space_visualizations.rst deleted file mode 100644 index 6e5cf4bd..00000000 --- a/doc/source/GPy.plotting.matplot_dep.latent_space_visualizations.rst +++ /dev/null @@ -1,17 +0,0 @@ -GPy.plotting.matplot_dep.latent_space_visualizations package -============================================================ - -Subpackages ------------ - -.. toctree:: - - GPy.plotting.matplot_dep.latent_space_visualizations.controllers - -Module contents ---------------- - -.. automodule:: GPy.plotting.matplot_dep.latent_space_visualizations - :members: - :undoc-members: - :show-inheritance: diff --git a/doc/source/GPy.plotting.matplot_dep.rst b/doc/source/GPy.plotting.matplot_dep.rst index 77780708..9521d9e6 100644 --- a/doc/source/GPy.plotting.matplot_dep.rst +++ b/doc/source/GPy.plotting.matplot_dep.rst @@ -6,31 +6,15 @@ Subpackages .. toctree:: - GPy.plotting.matplot_dep.latent_space_visualizations + GPy.plotting.matplot_dep.controllers Submodules ---------- -GPy.plotting.matplot_dep.Tango module -------------------------------------- +GPy.plotting.matplot_dep.defaults module +---------------------------------------- -.. automodule:: GPy.plotting.matplot_dep.Tango - :members: - :undoc-members: - :show-inheritance: - -GPy.plotting.matplot_dep.base_plots module ------------------------------------------- - -.. automodule:: GPy.plotting.matplot_dep.base_plots - :members: - :undoc-members: - :show-inheritance: - -GPy.plotting.matplot_dep.dim_reduction_plots module ---------------------------------------------------- - -.. automodule:: GPy.plotting.matplot_dep.dim_reduction_plots +.. automodule:: GPy.plotting.matplot_dep.defaults :members: :undoc-members: :show-inheritance: @@ -43,14 +27,6 @@ GPy.plotting.matplot_dep.img_plots module :undoc-members: :show-inheritance: -GPy.plotting.matplot_dep.inference_plots module ------------------------------------------------ - -.. automodule:: GPy.plotting.matplot_dep.inference_plots - :members: - :undoc-members: - :show-inheritance: - GPy.plotting.matplot_dep.kernel_plots module -------------------------------------------- @@ -75,18 +51,10 @@ GPy.plotting.matplot_dep.maps module :undoc-members: :show-inheritance: -GPy.plotting.matplot_dep.models_plots module --------------------------------------------- +GPy.plotting.matplot_dep.plot_definitions module +------------------------------------------------ -.. automodule:: GPy.plotting.matplot_dep.models_plots - :members: - :undoc-members: - :show-inheritance: - -GPy.plotting.matplot_dep.netpbmfile module ------------------------------------------- - -.. automodule:: GPy.plotting.matplot_dep.netpbmfile +.. automodule:: GPy.plotting.matplot_dep.plot_definitions :members: :undoc-members: :show-inheritance: @@ -115,6 +83,14 @@ GPy.plotting.matplot_dep.svig_plots module :undoc-members: :show-inheritance: +GPy.plotting.matplot_dep.util module +------------------------------------ + +.. automodule:: GPy.plotting.matplot_dep.util + :members: + :undoc-members: + :show-inheritance: + GPy.plotting.matplot_dep.variational_plots module ------------------------------------------------- diff --git a/doc/source/GPy.plotting.plotly_dep.rst b/doc/source/GPy.plotting.plotly_dep.rst new file mode 100644 index 00000000..52642e49 --- /dev/null +++ b/doc/source/GPy.plotting.plotly_dep.rst @@ -0,0 +1,30 @@ +GPy.plotting.plotly_dep package +=============================== + +Submodules +---------- + +GPy.plotting.plotly_dep.defaults module +--------------------------------------- + +.. automodule:: GPy.plotting.plotly_dep.defaults + :members: + :undoc-members: + :show-inheritance: + +GPy.plotting.plotly_dep.plot_definitions module +----------------------------------------------- + +.. automodule:: GPy.plotting.plotly_dep.plot_definitions + :members: + :undoc-members: + :show-inheritance: + + +Module contents +--------------- + +.. automodule:: GPy.plotting.plotly_dep + :members: + :undoc-members: + :show-inheritance: diff --git a/doc/source/GPy.plotting.rst b/doc/source/GPy.plotting.rst index af035515..33c39c93 100644 --- a/doc/source/GPy.plotting.rst +++ b/doc/source/GPy.plotting.rst @@ -6,7 +6,29 @@ Subpackages .. toctree:: + GPy.plotting.gpy_plot GPy.plotting.matplot_dep + GPy.plotting.plotly_dep + +Submodules +---------- + +GPy.plotting.Tango module +------------------------- + +.. automodule:: GPy.plotting.Tango + :members: + :undoc-members: + :show-inheritance: + +GPy.plotting.abstract_plotting_library module +--------------------------------------------- + +.. automodule:: GPy.plotting.abstract_plotting_library + :members: + :undoc-members: + :show-inheritance: + Module contents --------------- diff --git a/doc/source/GPy.testing.rst b/doc/source/GPy.testing.rst index 9ee1e34b..a10c3d18 100644 --- a/doc/source/GPy.testing.rst +++ b/doc/source/GPy.testing.rst @@ -164,6 +164,14 @@ GPy.testing.pickle_tests module :undoc-members: :show-inheritance: +GPy.testing.plotting_tests module +--------------------------------- + +.. automodule:: GPy.testing.plotting_tests + :members: + :undoc-members: + :show-inheritance: + GPy.testing.prior_tests module ------------------------------ diff --git a/doc/source/conf.py b/doc/source/conf.py index 0925bf5c..91187571 100644 --- a/doc/source/conf.py +++ b/doc/source/conf.py @@ -54,6 +54,8 @@ extensions = [ #sys.modules.update((mod_name, Mock()) for mod_name in MOCK_MODULES) +import sphinx_rtd_theme + autodoc_default_flags = ['members', #'undoc-members', #'private-members', @@ -68,7 +70,7 @@ show_authors = True # ------ Sphinx # Add any paths that contain templates here, relative to this directory. -templates_path = ['_templates'] +html_theme_path = [sphinx_rtd_theme.get_html_theme_path()]#templates_path = ['_templates'] # The suffix(es) of source filenames. # You can specify multiple suffix as a list of string: