diff --git a/doc/GPy.likelihoods.rst b/doc/GPy.likelihoods.rst index 34672d11..03c15a82 100644 --- a/doc/GPy.likelihoods.rst +++ b/doc/GPy.likelihoods.rst @@ -12,7 +12,7 @@ likelihoods Package :mod:`EP` Module ---------------- -.. automodule:: GPy.likelihoods.EP +.. automodule:: GPy.likelihoods.ep :members: :undoc-members: :show-inheritance: @@ -20,7 +20,7 @@ likelihoods Package :mod:`Gaussian` Module ---------------------- -.. automodule:: GPy.likelihoods.Gaussian +.. automodule:: GPy.likelihoods.gaussian :members: :undoc-members: :show-inheritance: diff --git a/doc/GPy.models.rst b/doc/GPy.models.rst index 85bd727a..f4ae6a59 100644 --- a/doc/GPy.models.rst +++ b/doc/GPy.models.rst @@ -12,71 +12,71 @@ models Package :mod:`Bayesian_GPLVM` Module ---------------------------- -.. automodule:: GPy.models.Bayesian_GPLVM +.. automodule:: GPy.models.bayesian_gplvm :members: :undoc-members: :show-inheritance: -:mod:`GP` Module +:mod:`gp` Module ---------------- -.. automodule:: GPy.models.GP +.. automodule:: GPy.models.gp :members: :undoc-members: :show-inheritance: -:mod:`GPLVM` Module +:mod:`gplvm` Module ------------------- -.. automodule:: GPy.models.GPLVM +.. automodule:: GPy.models.gplvm :members: :undoc-members: :show-inheritance: -:mod:`GP_regression` Module +:mod:`gp_regression` Module --------------------------- -.. automodule:: GPy.models.GP_regression +.. automodule:: GPy.models.gp_regression :members: :undoc-members: :show-inheritance: -:mod:`sparse_GP` Module +:mod:`sparse_gp` Module ----------------------- -.. automodule:: GPy.models.sparse_GP +.. automodule:: GPy.models.sparse_gp :members: :undoc-members: :show-inheritance: -:mod:`sparse_GPLVM` Module +:mod:`SparseGPLVM` Module -------------------------- -.. automodule:: GPy.models.sparse_GPLVM +.. automodule:: GPy.models.sparse_gplvm :members: :undoc-members: :show-inheritance: -:mod:`sparse_GP_regression` Module +:mod:`sparse_gp_regression` Module ---------------------------------- -.. automodule:: GPy.models.sparse_GP_regression +.. automodule:: GPy.models.sparse_gp_regression :members: :undoc-members: :show-inheritance: -:mod:`uncollapsed_sparse_GP` Module ------------------------------------ +.. :mod:`uncollapsed_sparse_GP` Module +.. ----------------------------------- -.. automodule:: GPy.models.uncollapsed_sparse_GP - :members: - :undoc-members: - :show-inheritance: +.. .. automodule:: GPy.models.uncollapsed_sparse_GP +.. :members: +.. :undoc-members: +.. :show-inheritance: -:mod:`warped_GP` Module +:mod:`warped_gp` Module ----------------------- -.. automodule:: GPy.models.warped_GP +.. automodule:: GPy.models.warped_gp :members: :undoc-members: :show-inheritance: diff --git a/doc/tuto_GP_regression.rst b/doc/tuto_GP_regression.rst index 9f01de93..3d3ab10a 100644 --- a/doc/tuto_GP_regression.rst +++ b/doc/tuto_GP_regression.rst @@ -36,7 +36,7 @@ The parameter ``input_dim`` stands for the dimension of the input space. The par The inputs required for building the model are the observations and the kernel:: - m = GPy.models.GP_regression(X,Y,kernel) + m = GPy.models.GPRegression(X,Y,kernel) By default, some observation noise is added to the modle. The functions ``print`` and ``plot`` give an insight of the model we have just build. The code:: @@ -116,7 +116,7 @@ Here is a 2 dimensional example:: ker = GPy.kern.Matern52(2,ARD=True) + GPy.kern.white(2) # create simple GP model - m = GPy.models.GP_regression(X,Y,ker) + m = GPy.models.GPRegression(X,Y,ker) # contrain all parameters to be positive m.constrain_positive('') diff --git a/doc/tuto_kernel_overview.rst b/doc/tuto_kernel_overview.rst index 450e53e2..e9e8f290 100644 --- a/doc/tuto_kernel_overview.rst +++ b/doc/tuto_kernel_overview.rst @@ -211,7 +211,7 @@ Note the ties between the parameters of ``Kanova`` that reflect the links betwee Y = 0.5*X[:,:1] + 0.5*X[:,1:] + 2*np.sin(X[:,:1]) * np.sin(X[:,1:]) # Create GP regression model - m = GPy.models.GP_regression(X,Y,Kanova) + m = GPy.models.GPRegression(X,Y,Kanova) m.plot() .. figure:: Figures/tuto_kern_overview_mANOVA.png