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Merge branch 'devel' of github.com:SheffieldML/GPy into devel

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Max Zwiessele 2015-09-09 08:07:31 +01:00
commit 5e8a3aef26
3 changed files with 1 additions and 3 deletions
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1
GPy/inference/latent_function_inference/laplace.py
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@ -171,7 +171,6 @@ class Laplace(LatentFunctionInference):
#define the objective function (to be maximised) #define the objective function (to be maximised)
def obj(Ki_f, f): def obj(Ki_f, f):
ll = -0.5*np.sum(np.dot(Ki_f.T, f)) + np.sum(likelihood.logpdf(f, Y, Y_metadata=Y_metadata)) ll = -0.5*np.sum(np.dot(Ki_f.T, f)) + np.sum(likelihood.logpdf(f, Y, Y_metadata=Y_metadata))
print(ll)
if np.isnan(ll): if np.isnan(ll):
import ipdb; ipdb.set_trace() # XXX BREAKPOINT import ipdb; ipdb.set_trace() # XXX BREAKPOINT
return -np.inf return -np.inf

1
GPy/models/gp_var_gauss.py
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@ -34,4 +34,3 @@ class GPVariationalGaussianApproximation(GP):
self.link_parameter(self.alpha) self.link_parameter(self.alpha)
self.link_parameter(self.beta) self.link_parameter(self.beta)

2
setup.py
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@ -23,7 +23,7 @@ def ismac():
if ismac(): if ismac():
compile_flags = [ '-O3', ] compile_flags = [ '-O3', ]
link_args = [''] link_args = []
else: else:
compile_flags = [ '-fopenmp', '-O3', ] compile_flags = [ '-fopenmp', '-O3', ]
link_args = ['-lgomp'] link_args = ['-lgomp']