diff --git a/GPy/testing/plotting_tests.py b/GPy/testing/plotting_tests.py index 2fb7cf70..238f3f7f 100644 --- a/GPy/testing/plotting_tests.py +++ b/GPy/testing/plotting_tests.py @@ -179,7 +179,7 @@ def test_gplvm(): # k = kern.RBF(Q, ARD=True, lengthscale=10.) m = GPLVM(Y, Q, init="PCA", kernel=k) m.likelihood.variance = .1 - m.optimize(messages=0) + #m.optimize(messages=0) labels = np.random.multinomial(1, np.random.dirichlet([.3333333, .3333333, .3333333]), size=(m.Y.shape[0])).nonzero()[1] m.plot_latent() m.plot_latent_scatter(projection='3d', labels=labels) @@ -200,7 +200,7 @@ def test_bayesian_gplvm(): # k = kern.RBF(Q, ARD=True, lengthscale=10.) m = BayesianGPLVM(Y, Q, init="PCA", kernel=k) m.likelihood.variance = .1 - m.optimize(messages=0) + #m.optimize(messages=0) labels = np.random.multinomial(1, np.random.dirichlet([.3333333, .3333333, .3333333]), size=(m.Y.shape[0])).nonzero()[1] m.plot_latent_inducing(projection='2d') m.plot_latent_inducing(projection='3d') diff --git a/GPy/testing/plotting_tests/baseline/bayesian_gplvm_gradient.png b/GPy/testing/plotting_tests/baseline/bayesian_gplvm_gradient.png index 8e2d0e38..cf4eca4b 100644 Binary files a/GPy/testing/plotting_tests/baseline/bayesian_gplvm_gradient.png and b/GPy/testing/plotting_tests/baseline/bayesian_gplvm_gradient.png differ diff --git a/GPy/testing/plotting_tests/baseline/bayesian_gplvm_inducing.png b/GPy/testing/plotting_tests/baseline/bayesian_gplvm_inducing.png index 28a2cb17..780415c9 100644 Binary files a/GPy/testing/plotting_tests/baseline/bayesian_gplvm_inducing.png and b/GPy/testing/plotting_tests/baseline/bayesian_gplvm_inducing.png differ diff --git a/GPy/testing/plotting_tests/baseline/bayesian_gplvm_inducing_3d.png b/GPy/testing/plotting_tests/baseline/bayesian_gplvm_inducing_3d.png index 503c0503..df2f5cd6 100644 Binary files a/GPy/testing/plotting_tests/baseline/bayesian_gplvm_inducing_3d.png and b/GPy/testing/plotting_tests/baseline/bayesian_gplvm_inducing_3d.png differ diff --git a/GPy/testing/plotting_tests/baseline/bayesian_gplvm_latent_3d.png b/GPy/testing/plotting_tests/baseline/bayesian_gplvm_latent_3d.png index 19261f60..235cf121 100644 Binary files a/GPy/testing/plotting_tests/baseline/bayesian_gplvm_latent_3d.png and b/GPy/testing/plotting_tests/baseline/bayesian_gplvm_latent_3d.png differ diff --git a/GPy/testing/plotting_tests/baseline/bayesian_gplvm_magnification.png b/GPy/testing/plotting_tests/baseline/bayesian_gplvm_magnification.png index ca7f121e..58d4a72d 100644 Binary files a/GPy/testing/plotting_tests/baseline/bayesian_gplvm_magnification.png and b/GPy/testing/plotting_tests/baseline/bayesian_gplvm_magnification.png differ diff --git a/GPy/testing/plotting_tests/baseline/gplvm_gradient.png b/GPy/testing/plotting_tests/baseline/gplvm_gradient.png index 39b84415..6c371126 100644 Binary files a/GPy/testing/plotting_tests/baseline/gplvm_gradient.png and b/GPy/testing/plotting_tests/baseline/gplvm_gradient.png differ diff --git a/GPy/testing/plotting_tests/baseline/gplvm_latent.png b/GPy/testing/plotting_tests/baseline/gplvm_latent.png index 634c2ba8..1c4d86e5 100644 Binary files a/GPy/testing/plotting_tests/baseline/gplvm_latent.png and b/GPy/testing/plotting_tests/baseline/gplvm_latent.png differ diff --git a/GPy/testing/plotting_tests/baseline/gplvm_latent_3d.png b/GPy/testing/plotting_tests/baseline/gplvm_latent_3d.png index f23923bf..502ec3c1 100644 Binary files a/GPy/testing/plotting_tests/baseline/gplvm_latent_3d.png and b/GPy/testing/plotting_tests/baseline/gplvm_latent_3d.png differ diff --git a/GPy/testing/plotting_tests/baseline/gplvm_magnification.png b/GPy/testing/plotting_tests/baseline/gplvm_magnification.png index 6e9144be..84fb1cb6 100644 Binary files a/GPy/testing/plotting_tests/baseline/gplvm_magnification.png and b/GPy/testing/plotting_tests/baseline/gplvm_magnification.png differ