diff --git a/GPy/kern/src/coregionalize_cython.c b/GPy/kern/src/coregionalize_cython.c index d8765de8..4b46fadc 100644 --- a/GPy/kern/src/coregionalize_cython.c +++ b/GPy/kern/src/coregionalize_cython.c @@ -1,16 +1,18 @@ -/* Generated by Cython 0.23 */ +/* Generated by Cython 0.29.2 */ #define PY_SSIZE_T_CLEAN #include "Python.h" #ifndef Py_PYTHON_H #error Python headers needed to compile C extensions, please install development version of Python. -#elif PY_VERSION_HEX < 0x02060000 || (0x03000000 <= PY_VERSION_HEX && PY_VERSION_HEX < 0x03020000) - #error Cython requires Python 2.6+ or Python 3.2+. +#elif PY_VERSION_HEX < 0x02060000 || (0x03000000 <= PY_VERSION_HEX && PY_VERSION_HEX < 0x03030000) + #error Cython requires Python 2.6+ or Python 3.3+. #else -#define CYTHON_ABI "0_23" +#define CYTHON_ABI "0_29_2" +#define CYTHON_HEX_VERSION 0x001D02F0 +#define CYTHON_FUTURE_DIVISION 0 #include #ifndef offsetof -#define offsetof(type, member) ( (size_t) & ((type*)0) -> member ) + #define offsetof(type, member) ( (size_t) & ((type*)0) -> member ) #endif #if !defined(WIN32) && !defined(MS_WINDOWS) #ifndef __stdcall @@ -29,6 +31,12 @@ #ifndef DL_EXPORT #define DL_EXPORT(t) t #endif +#define __PYX_COMMA , +#ifndef HAVE_LONG_LONG + #if PY_VERSION_HEX >= 0x02070000 + #define HAVE_LONG_LONG + #endif +#endif #ifndef PY_LONG_LONG #define PY_LONG_LONG LONG_LONG #endif @@ -36,17 +44,262 @@ #define Py_HUGE_VAL HUGE_VAL #endif #ifdef PYPY_VERSION -#define CYTHON_COMPILING_IN_PYPY 1 -#define CYTHON_COMPILING_IN_CPYTHON 0 + #define CYTHON_COMPILING_IN_PYPY 1 + #define CYTHON_COMPILING_IN_PYSTON 0 + #define CYTHON_COMPILING_IN_CPYTHON 0 + #undef CYTHON_USE_TYPE_SLOTS + #define CYTHON_USE_TYPE_SLOTS 0 + #undef CYTHON_USE_PYTYPE_LOOKUP + #define CYTHON_USE_PYTYPE_LOOKUP 0 + #if PY_VERSION_HEX < 0x03050000 + #undef CYTHON_USE_ASYNC_SLOTS + #define CYTHON_USE_ASYNC_SLOTS 0 + #elif !defined(CYTHON_USE_ASYNC_SLOTS) + #define CYTHON_USE_ASYNC_SLOTS 1 + #endif + #undef CYTHON_USE_PYLIST_INTERNALS + #define CYTHON_USE_PYLIST_INTERNALS 0 + #undef CYTHON_USE_UNICODE_INTERNALS + #define CYTHON_USE_UNICODE_INTERNALS 0 + #undef CYTHON_USE_UNICODE_WRITER + #define CYTHON_USE_UNICODE_WRITER 0 + #undef CYTHON_USE_PYLONG_INTERNALS + #define CYTHON_USE_PYLONG_INTERNALS 0 + #undef CYTHON_AVOID_BORROWED_REFS + #define CYTHON_AVOID_BORROWED_REFS 1 + #undef CYTHON_ASSUME_SAFE_MACROS + #define CYTHON_ASSUME_SAFE_MACROS 0 + #undef CYTHON_UNPACK_METHODS + #define CYTHON_UNPACK_METHODS 0 + #undef CYTHON_FAST_THREAD_STATE + #define CYTHON_FAST_THREAD_STATE 0 + #undef CYTHON_FAST_PYCALL + #define CYTHON_FAST_PYCALL 0 + #undef CYTHON_PEP489_MULTI_PHASE_INIT + #define CYTHON_PEP489_MULTI_PHASE_INIT 0 + #undef CYTHON_USE_TP_FINALIZE + #define CYTHON_USE_TP_FINALIZE 0 + #undef CYTHON_USE_DICT_VERSIONS + #define CYTHON_USE_DICT_VERSIONS 0 + #undef CYTHON_USE_EXC_INFO_STACK + #define CYTHON_USE_EXC_INFO_STACK 0 +#elif defined(PYSTON_VERSION) + #define CYTHON_COMPILING_IN_PYPY 0 + #define CYTHON_COMPILING_IN_PYSTON 1 + #define CYTHON_COMPILING_IN_CPYTHON 0 + #ifndef CYTHON_USE_TYPE_SLOTS + #define CYTHON_USE_TYPE_SLOTS 1 + #endif + #undef CYTHON_USE_PYTYPE_LOOKUP + #define CYTHON_USE_PYTYPE_LOOKUP 0 + #undef CYTHON_USE_ASYNC_SLOTS + #define CYTHON_USE_ASYNC_SLOTS 0 + #undef CYTHON_USE_PYLIST_INTERNALS + #define CYTHON_USE_PYLIST_INTERNALS 0 + #ifndef CYTHON_USE_UNICODE_INTERNALS + #define CYTHON_USE_UNICODE_INTERNALS 1 + #endif + #undef CYTHON_USE_UNICODE_WRITER + #define CYTHON_USE_UNICODE_WRITER 0 + #undef CYTHON_USE_PYLONG_INTERNALS + #define CYTHON_USE_PYLONG_INTERNALS 0 + #ifndef CYTHON_AVOID_BORROWED_REFS + #define CYTHON_AVOID_BORROWED_REFS 0 + #endif + #ifndef CYTHON_ASSUME_SAFE_MACROS + #define CYTHON_ASSUME_SAFE_MACROS 1 + #endif + #ifndef CYTHON_UNPACK_METHODS + #define CYTHON_UNPACK_METHODS 1 + #endif + #undef CYTHON_FAST_THREAD_STATE + #define CYTHON_FAST_THREAD_STATE 0 + #undef CYTHON_FAST_PYCALL + #define CYTHON_FAST_PYCALL 0 + #undef CYTHON_PEP489_MULTI_PHASE_INIT + #define CYTHON_PEP489_MULTI_PHASE_INIT 0 + #undef CYTHON_USE_TP_FINALIZE + #define CYTHON_USE_TP_FINALIZE 0 + #undef CYTHON_USE_DICT_VERSIONS + #define CYTHON_USE_DICT_VERSIONS 0 + #undef CYTHON_USE_EXC_INFO_STACK + #define CYTHON_USE_EXC_INFO_STACK 0 #else -#define CYTHON_COMPILING_IN_PYPY 0 -#define CYTHON_COMPILING_IN_CPYTHON 1 + #define CYTHON_COMPILING_IN_PYPY 0 + #define CYTHON_COMPILING_IN_PYSTON 0 + #define CYTHON_COMPILING_IN_CPYTHON 1 + #ifndef CYTHON_USE_TYPE_SLOTS + #define CYTHON_USE_TYPE_SLOTS 1 + #endif + #if PY_VERSION_HEX < 0x02070000 + #undef CYTHON_USE_PYTYPE_LOOKUP + #define CYTHON_USE_PYTYPE_LOOKUP 0 + #elif !defined(CYTHON_USE_PYTYPE_LOOKUP) + #define CYTHON_USE_PYTYPE_LOOKUP 1 + #endif + #if PY_MAJOR_VERSION < 3 + #undef CYTHON_USE_ASYNC_SLOTS + #define CYTHON_USE_ASYNC_SLOTS 0 + #elif !defined(CYTHON_USE_ASYNC_SLOTS) + #define CYTHON_USE_ASYNC_SLOTS 1 + #endif + #if PY_VERSION_HEX < 0x02070000 + #undef CYTHON_USE_PYLONG_INTERNALS + #define CYTHON_USE_PYLONG_INTERNALS 0 + #elif !defined(CYTHON_USE_PYLONG_INTERNALS) + #define CYTHON_USE_PYLONG_INTERNALS 1 + #endif + #ifndef CYTHON_USE_PYLIST_INTERNALS + #define CYTHON_USE_PYLIST_INTERNALS 1 + #endif + #ifndef CYTHON_USE_UNICODE_INTERNALS + #define CYTHON_USE_UNICODE_INTERNALS 1 + #endif + #if PY_VERSION_HEX < 0x030300F0 + #undef CYTHON_USE_UNICODE_WRITER + #define CYTHON_USE_UNICODE_WRITER 0 + #elif !defined(CYTHON_USE_UNICODE_WRITER) + #define CYTHON_USE_UNICODE_WRITER 1 + #endif + #ifndef CYTHON_AVOID_BORROWED_REFS + #define CYTHON_AVOID_BORROWED_REFS 0 + #endif + #ifndef CYTHON_ASSUME_SAFE_MACROS + #define CYTHON_ASSUME_SAFE_MACROS 1 + #endif + #ifndef CYTHON_UNPACK_METHODS + #define CYTHON_UNPACK_METHODS 1 + #endif + #ifndef CYTHON_FAST_THREAD_STATE + #define CYTHON_FAST_THREAD_STATE 1 + #endif + #ifndef CYTHON_FAST_PYCALL + #define CYTHON_FAST_PYCALL 1 + #endif + #ifndef CYTHON_PEP489_MULTI_PHASE_INIT + #define CYTHON_PEP489_MULTI_PHASE_INIT (PY_VERSION_HEX >= 0x03050000) + #endif + #ifndef CYTHON_USE_TP_FINALIZE + #define CYTHON_USE_TP_FINALIZE (PY_VERSION_HEX >= 0x030400a1) + #endif + #ifndef CYTHON_USE_DICT_VERSIONS + #define CYTHON_USE_DICT_VERSIONS (PY_VERSION_HEX >= 0x030600B1) + #endif + #ifndef CYTHON_USE_EXC_INFO_STACK + #define CYTHON_USE_EXC_INFO_STACK (PY_VERSION_HEX >= 0x030700A3) + #endif #endif -#if !defined(CYTHON_USE_PYLONG_INTERNALS) && CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX >= 0x02070000 -#define CYTHON_USE_PYLONG_INTERNALS 1 +#if !defined(CYTHON_FAST_PYCCALL) +#define CYTHON_FAST_PYCCALL (CYTHON_FAST_PYCALL && PY_VERSION_HEX >= 0x030600B1) #endif +#if CYTHON_USE_PYLONG_INTERNALS + #include "longintrepr.h" + #undef SHIFT + #undef BASE + #undef MASK + #ifdef SIZEOF_VOID_P + enum { __pyx_check_sizeof_voidp = 1 / (int)(SIZEOF_VOID_P == sizeof(void*)) }; + #endif +#endif +#ifndef __has_attribute + #define __has_attribute(x) 0 +#endif +#ifndef __has_cpp_attribute + #define __has_cpp_attribute(x) 0 +#endif +#ifndef CYTHON_RESTRICT + #if defined(__GNUC__) + #define CYTHON_RESTRICT __restrict__ + #elif defined(_MSC_VER) && _MSC_VER >= 1400 + #define CYTHON_RESTRICT __restrict + #elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L + #define CYTHON_RESTRICT restrict + #else + #define CYTHON_RESTRICT + #endif +#endif +#ifndef CYTHON_UNUSED +# if defined(__GNUC__) +# if !(defined(__cplusplus)) || (__GNUC__ > 3 || (__GNUC__ == 3 && __GNUC_MINOR__ >= 4)) +# define CYTHON_UNUSED __attribute__ ((__unused__)) +# else +# define CYTHON_UNUSED +# endif +# elif defined(__ICC) || (defined(__INTEL_COMPILER) && !defined(_MSC_VER)) +# define CYTHON_UNUSED __attribute__ ((__unused__)) +# else +# define CYTHON_UNUSED +# endif +#endif +#ifndef CYTHON_MAYBE_UNUSED_VAR +# if defined(__cplusplus) + template void CYTHON_MAYBE_UNUSED_VAR( const T& ) { } +# else +# define CYTHON_MAYBE_UNUSED_VAR(x) (void)(x) +# endif +#endif +#ifndef CYTHON_NCP_UNUSED +# if CYTHON_COMPILING_IN_CPYTHON +# define CYTHON_NCP_UNUSED +# else +# define CYTHON_NCP_UNUSED CYTHON_UNUSED +# endif +#endif +#define __Pyx_void_to_None(void_result) ((void)(void_result), Py_INCREF(Py_None), Py_None) +#ifdef _MSC_VER + #ifndef _MSC_STDINT_H_ + #if _MSC_VER < 1300 + typedef unsigned char uint8_t; + typedef unsigned int uint32_t; + #else + typedef unsigned __int8 uint8_t; + typedef unsigned __int32 uint32_t; + #endif + #endif +#else + #include +#endif +#ifndef CYTHON_FALLTHROUGH + #if defined(__cplusplus) && __cplusplus >= 201103L + #if __has_cpp_attribute(fallthrough) + #define CYTHON_FALLTHROUGH [[fallthrough]] + #elif __has_cpp_attribute(clang::fallthrough) + #define CYTHON_FALLTHROUGH [[clang::fallthrough]] + #elif __has_cpp_attribute(gnu::fallthrough) + #define CYTHON_FALLTHROUGH [[gnu::fallthrough]] + #endif + #endif + #ifndef CYTHON_FALLTHROUGH + #if __has_attribute(fallthrough) + #define CYTHON_FALLTHROUGH __attribute__((fallthrough)) + #else + #define CYTHON_FALLTHROUGH + #endif + #endif + #if defined(__clang__ ) && defined(__apple_build_version__) + #if __apple_build_version__ < 7000000 + #undef CYTHON_FALLTHROUGH + #define CYTHON_FALLTHROUGH + #endif + #endif +#endif + +#ifndef CYTHON_INLINE + #if defined(__clang__) + #define CYTHON_INLINE __inline__ __attribute__ ((__unused__)) + #elif defined(__GNUC__) + #define CYTHON_INLINE __inline__ + #elif defined(_MSC_VER) + #define CYTHON_INLINE __inline + #elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L + #define CYTHON_INLINE inline + #else + #define CYTHON_INLINE + #endif +#endif + #if CYTHON_COMPILING_IN_PYPY && PY_VERSION_HEX < 0x02070600 && !defined(Py_OptimizeFlag) -#define Py_OptimizeFlag 0 + #define Py_OptimizeFlag 0 #endif #define __PYX_BUILD_PY_SSIZE_T "n" #define CYTHON_FORMAT_SSIZE_T "z" @@ -73,23 +326,145 @@ #ifndef Py_TPFLAGS_HAVE_FINALIZE #define Py_TPFLAGS_HAVE_FINALIZE 0 #endif +#ifndef METH_STACKLESS + #define METH_STACKLESS 0 +#endif +#if PY_VERSION_HEX <= 0x030700A3 || !defined(METH_FASTCALL) + #ifndef METH_FASTCALL + #define METH_FASTCALL 0x80 + #endif + typedef PyObject *(*__Pyx_PyCFunctionFast) (PyObject *self, PyObject *const *args, Py_ssize_t nargs); + typedef PyObject *(*__Pyx_PyCFunctionFastWithKeywords) (PyObject *self, PyObject *const *args, + Py_ssize_t nargs, PyObject *kwnames); +#else + #define __Pyx_PyCFunctionFast _PyCFunctionFast + #define __Pyx_PyCFunctionFastWithKeywords _PyCFunctionFastWithKeywords +#endif +#if CYTHON_FAST_PYCCALL +#define __Pyx_PyFastCFunction_Check(func)\ + ((PyCFunction_Check(func) && (METH_FASTCALL == (PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST | METH_KEYWORDS | METH_STACKLESS))))) +#else +#define __Pyx_PyFastCFunction_Check(func) 0 +#endif +#if CYTHON_USE_DICT_VERSIONS +#define __PYX_GET_DICT_VERSION(dict) (((PyDictObject*)(dict))->ma_version_tag) +#define __PYX_UPDATE_DICT_CACHE(dict, value, cache_var, version_var)\ + (version_var) = __PYX_GET_DICT_VERSION(dict);\ + (cache_var) = (value); +#define __PYX_PY_DICT_LOOKUP_IF_MODIFIED(VAR, DICT, LOOKUP) {\ + static PY_UINT64_T __pyx_dict_version = 0;\ + static PyObject *__pyx_dict_cached_value = NULL;\ + if (likely(__PYX_GET_DICT_VERSION(DICT) == __pyx_dict_version)) {\ + (VAR) = __pyx_dict_cached_value;\ + } else {\ + (VAR) = __pyx_dict_cached_value = (LOOKUP);\ + __pyx_dict_version = __PYX_GET_DICT_VERSION(DICT);\ + }\ + } +#else +#define __PYX_GET_DICT_VERSION(dict) (0) +#define __PYX_UPDATE_DICT_CACHE(dict, value, cache_var, version_var) +#define __PYX_PY_DICT_LOOKUP_IF_MODIFIED(VAR, DICT, LOOKUP) (VAR) = (LOOKUP); +#endif +#if CYTHON_COMPILING_IN_PYPY && !defined(PyObject_Malloc) + #define PyObject_Malloc(s) PyMem_Malloc(s) + #define PyObject_Free(p) PyMem_Free(p) + #define PyObject_Realloc(p) PyMem_Realloc(p) +#endif +#if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX < 0x030400A1 + #define PyMem_RawMalloc(n) PyMem_Malloc(n) + #define PyMem_RawRealloc(p, n) PyMem_Realloc(p, n) + #define PyMem_RawFree(p) PyMem_Free(p) +#endif +#if CYTHON_COMPILING_IN_PYSTON + #define __Pyx_PyCode_HasFreeVars(co) PyCode_HasFreeVars(co) + #define __Pyx_PyFrame_SetLineNumber(frame, lineno) PyFrame_SetLineNumber(frame, lineno) +#else + #define __Pyx_PyCode_HasFreeVars(co) (PyCode_GetNumFree(co) > 0) + #define __Pyx_PyFrame_SetLineNumber(frame, lineno) (frame)->f_lineno = (lineno) +#endif +#if !CYTHON_FAST_THREAD_STATE || PY_VERSION_HEX < 0x02070000 + #define __Pyx_PyThreadState_Current PyThreadState_GET() +#elif PY_VERSION_HEX >= 0x03060000 + #define __Pyx_PyThreadState_Current _PyThreadState_UncheckedGet() +#elif PY_VERSION_HEX >= 0x03000000 + #define __Pyx_PyThreadState_Current PyThreadState_GET() +#else + #define __Pyx_PyThreadState_Current _PyThreadState_Current +#endif +#if PY_VERSION_HEX < 0x030700A2 && !defined(PyThread_tss_create) && !defined(Py_tss_NEEDS_INIT) +#include "pythread.h" +#define Py_tss_NEEDS_INIT 0 +typedef int Py_tss_t; +static CYTHON_INLINE int PyThread_tss_create(Py_tss_t *key) { + *key = PyThread_create_key(); + return 0; // PyThread_create_key reports success always +} +static CYTHON_INLINE Py_tss_t * PyThread_tss_alloc(void) { + Py_tss_t *key = (Py_tss_t *)PyObject_Malloc(sizeof(Py_tss_t)); + *key = Py_tss_NEEDS_INIT; + return key; +} +static CYTHON_INLINE void PyThread_tss_free(Py_tss_t *key) { + PyObject_Free(key); +} +static CYTHON_INLINE int PyThread_tss_is_created(Py_tss_t *key) { + return *key != Py_tss_NEEDS_INIT; +} +static CYTHON_INLINE void PyThread_tss_delete(Py_tss_t *key) { + PyThread_delete_key(*key); + *key = Py_tss_NEEDS_INIT; +} +static CYTHON_INLINE int PyThread_tss_set(Py_tss_t *key, void *value) { + return PyThread_set_key_value(*key, value); +} +static CYTHON_INLINE void * PyThread_tss_get(Py_tss_t *key) { + return PyThread_get_key_value(*key); +} +#endif // TSS (Thread Specific Storage) API +#if CYTHON_COMPILING_IN_CPYTHON || defined(_PyDict_NewPresized) +#define __Pyx_PyDict_NewPresized(n) ((n <= 8) ? PyDict_New() : _PyDict_NewPresized(n)) +#else +#define __Pyx_PyDict_NewPresized(n) PyDict_New() +#endif +#if PY_MAJOR_VERSION >= 3 || CYTHON_FUTURE_DIVISION + #define __Pyx_PyNumber_Divide(x,y) PyNumber_TrueDivide(x,y) + #define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceTrueDivide(x,y) +#else + #define __Pyx_PyNumber_Divide(x,y) PyNumber_Divide(x,y) + #define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceDivide(x,y) +#endif +#if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX >= 0x030500A1 && CYTHON_USE_UNICODE_INTERNALS +#define __Pyx_PyDict_GetItemStr(dict, name) _PyDict_GetItem_KnownHash(dict, name, ((PyASCIIObject *) name)->hash) +#else +#define __Pyx_PyDict_GetItemStr(dict, name) PyDict_GetItem(dict, name) +#endif #if PY_VERSION_HEX > 0x03030000 && defined(PyUnicode_KIND) #define CYTHON_PEP393_ENABLED 1 #define __Pyx_PyUnicode_READY(op) (likely(PyUnicode_IS_READY(op)) ?\ 0 : _PyUnicode_Ready((PyObject *)(op))) #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_LENGTH(u) #define __Pyx_PyUnicode_READ_CHAR(u, i) PyUnicode_READ_CHAR(u, i) + #define __Pyx_PyUnicode_MAX_CHAR_VALUE(u) PyUnicode_MAX_CHAR_VALUE(u) #define __Pyx_PyUnicode_KIND(u) PyUnicode_KIND(u) #define __Pyx_PyUnicode_DATA(u) PyUnicode_DATA(u) #define __Pyx_PyUnicode_READ(k, d, i) PyUnicode_READ(k, d, i) + #define __Pyx_PyUnicode_WRITE(k, d, i, ch) PyUnicode_WRITE(k, d, i, ch) + #define __Pyx_PyUnicode_IS_TRUE(u) (0 != (likely(PyUnicode_IS_READY(u)) ? PyUnicode_GET_LENGTH(u) : PyUnicode_GET_SIZE(u))) #else #define CYTHON_PEP393_ENABLED 0 + #define PyUnicode_1BYTE_KIND 1 + #define PyUnicode_2BYTE_KIND 2 + #define PyUnicode_4BYTE_KIND 4 #define __Pyx_PyUnicode_READY(op) (0) #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_SIZE(u) #define __Pyx_PyUnicode_READ_CHAR(u, i) ((Py_UCS4)(PyUnicode_AS_UNICODE(u)[i])) + #define __Pyx_PyUnicode_MAX_CHAR_VALUE(u) ((sizeof(Py_UNICODE) == 2) ? 65535 : 1114111) #define __Pyx_PyUnicode_KIND(u) (sizeof(Py_UNICODE)) #define __Pyx_PyUnicode_DATA(u) ((void*)PyUnicode_AS_UNICODE(u)) #define __Pyx_PyUnicode_READ(k, d, i) ((void)(k), (Py_UCS4)(((Py_UNICODE*)d)[i])) + #define __Pyx_PyUnicode_WRITE(k, d, i, ch) (((void)(k)), ((Py_UNICODE*)d)[i] = ch) + #define __Pyx_PyUnicode_IS_TRUE(u) (0 != PyUnicode_GET_SIZE(u)) #endif #if CYTHON_COMPILING_IN_PYPY #define __Pyx_PyUnicode_Concat(a, b) PyNumber_Add(a, b) @@ -102,19 +477,29 @@ #if CYTHON_COMPILING_IN_PYPY && !defined(PyUnicode_Contains) #define PyUnicode_Contains(u, s) PySequence_Contains(u, s) #endif -#define __Pyx_PyString_FormatSafe(a, b) ((unlikely((a) == Py_None)) ? PyNumber_Remainder(a, b) : __Pyx_PyString_Format(a, b)) -#define __Pyx_PyUnicode_FormatSafe(a, b) ((unlikely((a) == Py_None)) ? PyNumber_Remainder(a, b) : PyUnicode_Format(a, b)) +#if CYTHON_COMPILING_IN_PYPY && !defined(PyByteArray_Check) + #define PyByteArray_Check(obj) PyObject_TypeCheck(obj, &PyByteArray_Type) +#endif +#if CYTHON_COMPILING_IN_PYPY && !defined(PyObject_Format) + #define PyObject_Format(obj, fmt) PyObject_CallMethod(obj, "__format__", "O", fmt) +#endif +#define __Pyx_PyString_FormatSafe(a, b) ((unlikely((a) == Py_None || (PyString_Check(b) && !PyString_CheckExact(b)))) ? PyNumber_Remainder(a, b) : __Pyx_PyString_Format(a, b)) +#define __Pyx_PyUnicode_FormatSafe(a, b) ((unlikely((a) == Py_None || (PyUnicode_Check(b) && !PyUnicode_CheckExact(b)))) ? PyNumber_Remainder(a, b) : PyUnicode_Format(a, b)) #if PY_MAJOR_VERSION >= 3 #define __Pyx_PyString_Format(a, b) PyUnicode_Format(a, b) #else #define __Pyx_PyString_Format(a, b) PyString_Format(a, b) #endif +#if PY_MAJOR_VERSION < 3 && !defined(PyObject_ASCII) + #define PyObject_ASCII(o) PyObject_Repr(o) +#endif #if PY_MAJOR_VERSION >= 3 #define PyBaseString_Type PyUnicode_Type #define PyStringObject PyUnicodeObject #define PyString_Type PyUnicode_Type #define PyString_Check PyUnicode_Check #define PyString_CheckExact PyUnicode_CheckExact + #define PyObject_Unicode PyObject_Str #endif #if PY_MAJOR_VERSION >= 3 #define __Pyx_PyBaseString_Check(obj) PyUnicode_Check(obj) @@ -126,7 +511,11 @@ #ifndef PySet_CheckExact #define PySet_CheckExact(obj) (Py_TYPE(obj) == &PySet_Type) #endif -#define __Pyx_TypeCheck(obj, type) PyObject_TypeCheck(obj, (PyTypeObject *)type) +#if CYTHON_ASSUME_SAFE_MACROS + #define __Pyx_PySequence_SIZE(seq) Py_SIZE(seq) +#else + #define __Pyx_PySequence_SIZE(seq) PySequence_Size(seq) +#endif #if PY_MAJOR_VERSION >= 3 #define PyIntObject PyLongObject #define PyInt_Type PyLong_Type @@ -161,46 +550,26 @@ #define __Pyx_PyInt_AsHash_t PyInt_AsSsize_t #endif #if PY_MAJOR_VERSION >= 3 - #define __Pyx_PyMethod_New(func, self, klass) ((self) ? PyMethod_New(func, self) : PyInstanceMethod_New(func)) + #define __Pyx_PyMethod_New(func, self, klass) ((self) ? PyMethod_New(func, self) : (Py_INCREF(func), func)) #else #define __Pyx_PyMethod_New(func, self, klass) PyMethod_New(func, self, klass) #endif -#if PY_VERSION_HEX >= 0x030500B1 -#define __Pyx_PyAsyncMethodsStruct PyAsyncMethods -#define __Pyx_PyType_AsAsync(obj) (Py_TYPE(obj)->tp_as_async) -#elif CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3 -typedef struct { - unaryfunc am_await; - unaryfunc am_aiter; - unaryfunc am_anext; -} __Pyx_PyAsyncMethodsStruct; -#define __Pyx_PyType_AsAsync(obj) ((__Pyx_PyAsyncMethodsStruct*) (Py_TYPE(obj)->tp_reserved)) +#if CYTHON_USE_ASYNC_SLOTS + #if PY_VERSION_HEX >= 0x030500B1 + #define __Pyx_PyAsyncMethodsStruct PyAsyncMethods + #define __Pyx_PyType_AsAsync(obj) (Py_TYPE(obj)->tp_as_async) + #else + #define __Pyx_PyType_AsAsync(obj) ((__Pyx_PyAsyncMethodsStruct*) (Py_TYPE(obj)->tp_reserved)) + #endif #else -#define __Pyx_PyType_AsAsync(obj) NULL + #define __Pyx_PyType_AsAsync(obj) NULL #endif -#ifndef CYTHON_RESTRICT - #if defined(__GNUC__) - #define CYTHON_RESTRICT __restrict__ - #elif defined(_MSC_VER) && _MSC_VER >= 1400 - #define CYTHON_RESTRICT __restrict - #elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L - #define CYTHON_RESTRICT restrict - #else - #define CYTHON_RESTRICT - #endif -#endif -#define __Pyx_void_to_None(void_result) (void_result, Py_INCREF(Py_None), Py_None) - -#ifndef CYTHON_INLINE - #if defined(__GNUC__) - #define CYTHON_INLINE __inline__ - #elif defined(_MSC_VER) - #define CYTHON_INLINE __inline - #elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L - #define CYTHON_INLINE inline - #else - #define CYTHON_INLINE - #endif +#ifndef __Pyx_PyAsyncMethodsStruct + typedef struct { + unaryfunc am_await; + unaryfunc am_aiter; + unaryfunc am_anext; + } __Pyx_PyAsyncMethodsStruct; #endif #if defined(WIN32) || defined(MS_WINDOWS) @@ -216,16 +585,18 @@ static CYTHON_INLINE float __PYX_NAN() { return value; } #endif - - -#if PY_MAJOR_VERSION >= 3 - #define __Pyx_PyNumber_Divide(x,y) PyNumber_TrueDivide(x,y) - #define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceTrueDivide(x,y) +#if defined(__CYGWIN__) && defined(_LDBL_EQ_DBL) +#define __Pyx_truncl trunc #else - #define __Pyx_PyNumber_Divide(x,y) PyNumber_Divide(x,y) - #define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceDivide(x,y) +#define __Pyx_truncl truncl #endif + +#define __PYX_ERR(f_index, lineno, Ln_error) \ +{ \ + __pyx_filename = __pyx_f[f_index]; __pyx_lineno = lineno; __pyx_clineno = __LINE__; goto Ln_error; \ +} + #ifndef __PYX_EXTERN_C #ifdef __cplusplus #define __PYX_EXTERN_C extern "C" @@ -234,42 +605,22 @@ static CYTHON_INLINE float __PYX_NAN() { #endif #endif -#define __PYX_HAVE__GPy__kern___src__coregionalize_cython -#define __PYX_HAVE_API__GPy__kern___src__coregionalize_cython -#include "string.h" -#include "stdio.h" -#include "stdlib.h" +#define __PYX_HAVE__GPy__kern__src__coregionalize_cython +#define __PYX_HAVE_API__GPy__kern__src__coregionalize_cython +/* Early includes */ +#include +#include #include "numpy/arrayobject.h" #include "numpy/ufuncobject.h" #ifdef _OPENMP #include #endif /* _OPENMP */ -#ifdef PYREX_WITHOUT_ASSERTIONS +#if defined(PYREX_WITHOUT_ASSERTIONS) && !defined(CYTHON_WITHOUT_ASSERTIONS) #define CYTHON_WITHOUT_ASSERTIONS #endif -#ifndef CYTHON_UNUSED -# if defined(__GNUC__) -# if !(defined(__cplusplus)) || (__GNUC__ > 3 || (__GNUC__ == 3 && __GNUC_MINOR__ >= 4)) -# define CYTHON_UNUSED __attribute__ ((__unused__)) -# else -# define CYTHON_UNUSED -# endif -# elif defined(__ICC) || (defined(__INTEL_COMPILER) && !defined(_MSC_VER)) -# define CYTHON_UNUSED __attribute__ ((__unused__)) -# else -# define CYTHON_UNUSED -# endif -#endif -#ifndef CYTHON_NCP_UNUSED -# if CYTHON_COMPILING_IN_CPYTHON -# define CYTHON_NCP_UNUSED -# else -# define CYTHON_NCP_UNUSED CYTHON_UNUSED -# endif -#endif -typedef struct {PyObject **p; char *s; const Py_ssize_t n; const char* encoding; +typedef struct {PyObject **p; const char *s; const Py_ssize_t n; const char* encoding; const char is_unicode; const char is_str; const char intern; } __Pyx_StringTabEntry; #define __PYX_DEFAULT_STRING_ENCODING_IS_ASCII 0 @@ -289,6 +640,9 @@ typedef struct {PyObject **p; char *s; const Py_ssize_t n; const char* encoding; (sizeof(type) == sizeof(Py_ssize_t) &&\ (is_signed || likely(v < (type)PY_SSIZE_T_MAX ||\ v == (type)PY_SSIZE_T_MAX))) ) +static CYTHON_INLINE int __Pyx_is_valid_index(Py_ssize_t i, Py_ssize_t limit) { + return (size_t) i < (size_t) limit; +} #if defined (__cplusplus) && __cplusplus >= 201103L #include #define __Pyx_sst_abs(value) std::abs(value) @@ -296,17 +650,17 @@ typedef struct {PyObject **p; char *s; const Py_ssize_t n; const char* encoding; #define __Pyx_sst_abs(value) abs(value) #elif SIZEOF_LONG >= SIZEOF_SIZE_T #define __Pyx_sst_abs(value) labs(value) +#elif defined (_MSC_VER) + #define __Pyx_sst_abs(value) ((Py_ssize_t)_abs64(value)) #elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L #define __Pyx_sst_abs(value) llabs(value) -#elif defined (_MSC_VER) && defined (_M_X64) - #define __Pyx_sst_abs(value) _abs64(value) #elif defined (__GNUC__) #define __Pyx_sst_abs(value) __builtin_llabs(value) #else #define __Pyx_sst_abs(value) ((value<0) ? -value : value) #endif -static CYTHON_INLINE char* __Pyx_PyObject_AsString(PyObject*); -static CYTHON_INLINE char* __Pyx_PyObject_AsStringAndSize(PyObject*, Py_ssize_t* length); +static CYTHON_INLINE const char* __Pyx_PyObject_AsString(PyObject*); +static CYTHON_INLINE const char* __Pyx_PyObject_AsStringAndSize(PyObject*, Py_ssize_t* length); #define __Pyx_PyByteArray_FromString(s) PyByteArray_FromStringAndSize((const char*)s, strlen((const char*)s)) #define __Pyx_PyByteArray_FromStringAndSize(s, l) PyByteArray_FromStringAndSize((const char*)s, l) #define __Pyx_PyBytes_FromString PyBytes_FromString @@ -319,39 +673,52 @@ static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(const char*); #define __Pyx_PyStr_FromString __Pyx_PyUnicode_FromString #define __Pyx_PyStr_FromStringAndSize __Pyx_PyUnicode_FromStringAndSize #endif -#define __Pyx_PyObject_AsSString(s) ((signed char*) __Pyx_PyObject_AsString(s)) -#define __Pyx_PyObject_AsUString(s) ((unsigned char*) __Pyx_PyObject_AsString(s)) +#define __Pyx_PyBytes_AsWritableString(s) ((char*) PyBytes_AS_STRING(s)) +#define __Pyx_PyBytes_AsWritableSString(s) ((signed char*) PyBytes_AS_STRING(s)) +#define __Pyx_PyBytes_AsWritableUString(s) ((unsigned char*) PyBytes_AS_STRING(s)) +#define __Pyx_PyBytes_AsString(s) ((const char*) PyBytes_AS_STRING(s)) +#define __Pyx_PyBytes_AsSString(s) ((const signed char*) PyBytes_AS_STRING(s)) +#define __Pyx_PyBytes_AsUString(s) ((const unsigned char*) PyBytes_AS_STRING(s)) +#define __Pyx_PyObject_AsWritableString(s) ((char*) __Pyx_PyObject_AsString(s)) +#define __Pyx_PyObject_AsWritableSString(s) ((signed char*) __Pyx_PyObject_AsString(s)) +#define __Pyx_PyObject_AsWritableUString(s) ((unsigned char*) __Pyx_PyObject_AsString(s)) +#define __Pyx_PyObject_AsSString(s) ((const signed char*) __Pyx_PyObject_AsString(s)) +#define __Pyx_PyObject_AsUString(s) ((const unsigned char*) __Pyx_PyObject_AsString(s)) #define __Pyx_PyObject_FromCString(s) __Pyx_PyObject_FromString((const char*)s) #define __Pyx_PyBytes_FromCString(s) __Pyx_PyBytes_FromString((const char*)s) #define __Pyx_PyByteArray_FromCString(s) __Pyx_PyByteArray_FromString((const char*)s) #define __Pyx_PyStr_FromCString(s) __Pyx_PyStr_FromString((const char*)s) #define __Pyx_PyUnicode_FromCString(s) __Pyx_PyUnicode_FromString((const char*)s) -#if PY_MAJOR_VERSION < 3 -static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u) -{ +static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u) { const Py_UNICODE *u_end = u; while (*u_end++) ; return (size_t)(u_end - u - 1); } -#else -#define __Pyx_Py_UNICODE_strlen Py_UNICODE_strlen -#endif #define __Pyx_PyUnicode_FromUnicode(u) PyUnicode_FromUnicode(u, __Pyx_Py_UNICODE_strlen(u)) #define __Pyx_PyUnicode_FromUnicodeAndLength PyUnicode_FromUnicode #define __Pyx_PyUnicode_AsUnicode PyUnicode_AsUnicode #define __Pyx_NewRef(obj) (Py_INCREF(obj), obj) #define __Pyx_Owned_Py_None(b) __Pyx_NewRef(Py_None) -#define __Pyx_PyBool_FromLong(b) ((b) ? __Pyx_NewRef(Py_True) : __Pyx_NewRef(Py_False)) +static CYTHON_INLINE PyObject * __Pyx_PyBool_FromLong(long b); static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject*); -static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x); +static CYTHON_INLINE int __Pyx_PyObject_IsTrueAndDecref(PyObject*); +static CYTHON_INLINE PyObject* __Pyx_PyNumber_IntOrLong(PyObject* x); +#define __Pyx_PySequence_Tuple(obj)\ + (likely(PyTuple_CheckExact(obj)) ? __Pyx_NewRef(obj) : PySequence_Tuple(obj)) static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject*); static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t); -#if CYTHON_COMPILING_IN_CPYTHON +#if CYTHON_ASSUME_SAFE_MACROS #define __pyx_PyFloat_AsDouble(x) (PyFloat_CheckExact(x) ? PyFloat_AS_DOUBLE(x) : PyFloat_AsDouble(x)) #else #define __pyx_PyFloat_AsDouble(x) PyFloat_AsDouble(x) #endif #define __pyx_PyFloat_AsFloat(x) ((float) __pyx_PyFloat_AsDouble(x)) +#if PY_MAJOR_VERSION >= 3 +#define __Pyx_PyNumber_Int(x) (PyLong_CheckExact(x) ? __Pyx_NewRef(x) : PyNumber_Long(x)) +#else +#define __Pyx_PyNumber_Int(x) (PyInt_CheckExact(x) ? __Pyx_NewRef(x) : PyNumber_Int(x)) +#endif +#define __Pyx_PyNumber_Float(x) (PyFloat_CheckExact(x) ? __Pyx_NewRef(x) : PyNumber_Float(x)) #if PY_MAJOR_VERSION < 3 && __PYX_DEFAULT_STRING_ENCODING_IS_ASCII static int __Pyx_sys_getdefaultencoding_not_ascii; static int __Pyx_init_sys_getdefaultencoding_params(void) { @@ -415,7 +782,7 @@ static int __Pyx_init_sys_getdefaultencoding_params(void) { if (!default_encoding) goto bad; default_encoding_c = PyBytes_AsString(default_encoding); if (!default_encoding_c) goto bad; - __PYX_DEFAULT_STRING_ENCODING = (char*) malloc(strlen(default_encoding_c)); + __PYX_DEFAULT_STRING_ENCODING = (char*) malloc(strlen(default_encoding_c) + 1); if (!__PYX_DEFAULT_STRING_ENCODING) goto bad; strcpy(__PYX_DEFAULT_STRING_ENCODING, default_encoding_c); Py_DECREF(default_encoding); @@ -436,17 +803,21 @@ bad: #define likely(x) (x) #define unlikely(x) (x) #endif /* __GNUC__ */ +static CYTHON_INLINE void __Pyx_pretend_to_initialize(void* ptr) { (void)ptr; } -static PyObject *__pyx_m; +static PyObject *__pyx_m = NULL; static PyObject *__pyx_d; static PyObject *__pyx_b; +static PyObject *__pyx_cython_runtime = NULL; static PyObject *__pyx_empty_tuple; static PyObject *__pyx_empty_bytes; +static PyObject *__pyx_empty_unicode; static int __pyx_lineno; static int __pyx_clineno = 0; static const char * __pyx_cfilenm= __FILE__; static const char *__pyx_filename; +/* Header.proto */ #if !defined(CYTHON_CCOMPLEX) #if defined(__cplusplus) #define CYTHON_CCOMPLEX 1 @@ -470,10 +841,11 @@ static const char *__pyx_filename; static const char *__pyx_f[] = { - "GPy/kern/_src/coregionalize_cython.pyx", + "GPy/kern/src/coregionalize_cython.pyx", "__init__.pxd", "type.pxd", }; +/* BufferFormatStructs.proto */ #define IS_UNSIGNED(type) (((type) -1) > 0) struct __Pyx_StructField_; #define __PYX_BUF_FLAGS_PACKED_STRUCT (1 << 0) @@ -509,8 +881,20 @@ typedef struct { char is_valid_array; } __Pyx_BufFmt_Context; +/* NoFastGil.proto */ +#define __Pyx_PyGILState_Ensure PyGILState_Ensure +#define __Pyx_PyGILState_Release PyGILState_Release +#define __Pyx_FastGIL_Remember() +#define __Pyx_FastGIL_Forget() +#define __Pyx_FastGilFuncInit() -/* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":725 +/* ForceInitThreads.proto */ +#ifndef __PYX_FORCE_INIT_THREADS + #define __PYX_FORCE_INIT_THREADS 0 +#endif + + +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":776 * # in Cython to enable them only on the right systems. * * ctypedef npy_int8 int8_t # <<<<<<<<<<<<<< @@ -519,7 +903,7 @@ typedef struct { */ typedef npy_int8 __pyx_t_5numpy_int8_t; -/* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":726 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":777 * * ctypedef npy_int8 int8_t * ctypedef npy_int16 int16_t # <<<<<<<<<<<<<< @@ -528,7 +912,7 @@ typedef npy_int8 __pyx_t_5numpy_int8_t; */ typedef npy_int16 __pyx_t_5numpy_int16_t; -/* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":727 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":778 * ctypedef npy_int8 int8_t * ctypedef npy_int16 int16_t * ctypedef npy_int32 int32_t # <<<<<<<<<<<<<< @@ -537,7 +921,7 @@ typedef npy_int16 __pyx_t_5numpy_int16_t; */ typedef npy_int32 __pyx_t_5numpy_int32_t; -/* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":728 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":779 * ctypedef npy_int16 int16_t * ctypedef npy_int32 int32_t * ctypedef npy_int64 int64_t # <<<<<<<<<<<<<< @@ -546,7 +930,7 @@ typedef npy_int32 __pyx_t_5numpy_int32_t; */ typedef npy_int64 __pyx_t_5numpy_int64_t; -/* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":732 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":783 * #ctypedef npy_int128 int128_t * * ctypedef npy_uint8 uint8_t # <<<<<<<<<<<<<< @@ -555,7 +939,7 @@ typedef npy_int64 __pyx_t_5numpy_int64_t; */ typedef npy_uint8 __pyx_t_5numpy_uint8_t; -/* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":733 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":784 * * ctypedef npy_uint8 uint8_t * ctypedef npy_uint16 uint16_t # <<<<<<<<<<<<<< @@ -564,7 +948,7 @@ typedef npy_uint8 __pyx_t_5numpy_uint8_t; */ typedef npy_uint16 __pyx_t_5numpy_uint16_t; -/* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":734 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":785 * ctypedef npy_uint8 uint8_t * ctypedef npy_uint16 uint16_t * ctypedef npy_uint32 uint32_t # <<<<<<<<<<<<<< @@ -573,7 +957,7 @@ typedef npy_uint16 __pyx_t_5numpy_uint16_t; */ typedef npy_uint32 __pyx_t_5numpy_uint32_t; -/* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":735 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":786 * ctypedef npy_uint16 uint16_t * ctypedef npy_uint32 uint32_t * ctypedef npy_uint64 uint64_t # <<<<<<<<<<<<<< @@ -582,7 +966,7 @@ typedef npy_uint32 __pyx_t_5numpy_uint32_t; */ typedef npy_uint64 __pyx_t_5numpy_uint64_t; -/* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":739 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":790 * #ctypedef npy_uint128 uint128_t * * ctypedef npy_float32 float32_t # <<<<<<<<<<<<<< @@ -591,7 +975,7 @@ typedef npy_uint64 __pyx_t_5numpy_uint64_t; */ typedef npy_float32 __pyx_t_5numpy_float32_t; -/* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":740 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":791 * * ctypedef npy_float32 float32_t * ctypedef npy_float64 float64_t # <<<<<<<<<<<<<< @@ -600,7 +984,7 @@ typedef npy_float32 __pyx_t_5numpy_float32_t; */ typedef npy_float64 __pyx_t_5numpy_float64_t; -/* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":749 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":800 * # The int types are mapped a bit surprising -- * # numpy.int corresponds to 'l' and numpy.long to 'q' * ctypedef npy_long int_t # <<<<<<<<<<<<<< @@ -609,7 +993,7 @@ typedef npy_float64 __pyx_t_5numpy_float64_t; */ typedef npy_long __pyx_t_5numpy_int_t; -/* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":750 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":801 * # numpy.int corresponds to 'l' and numpy.long to 'q' * ctypedef npy_long int_t * ctypedef npy_longlong long_t # <<<<<<<<<<<<<< @@ -618,7 +1002,7 @@ typedef npy_long __pyx_t_5numpy_int_t; */ typedef npy_longlong __pyx_t_5numpy_long_t; -/* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":751 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":802 * ctypedef npy_long int_t * ctypedef npy_longlong long_t * ctypedef npy_longlong longlong_t # <<<<<<<<<<<<<< @@ -627,7 +1011,7 @@ typedef npy_longlong __pyx_t_5numpy_long_t; */ typedef npy_longlong __pyx_t_5numpy_longlong_t; -/* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":753 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":804 * ctypedef npy_longlong longlong_t * * ctypedef npy_ulong uint_t # <<<<<<<<<<<<<< @@ -636,7 +1020,7 @@ typedef npy_longlong __pyx_t_5numpy_longlong_t; */ typedef npy_ulong __pyx_t_5numpy_uint_t; -/* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":754 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":805 * * ctypedef npy_ulong uint_t * ctypedef npy_ulonglong ulong_t # <<<<<<<<<<<<<< @@ -645,7 +1029,7 @@ typedef npy_ulong __pyx_t_5numpy_uint_t; */ typedef npy_ulonglong __pyx_t_5numpy_ulong_t; -/* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":755 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":806 * ctypedef npy_ulong uint_t * ctypedef npy_ulonglong ulong_t * ctypedef npy_ulonglong ulonglong_t # <<<<<<<<<<<<<< @@ -654,7 +1038,7 @@ typedef npy_ulonglong __pyx_t_5numpy_ulong_t; */ typedef npy_ulonglong __pyx_t_5numpy_ulonglong_t; -/* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":757 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":808 * ctypedef npy_ulonglong ulonglong_t * * ctypedef npy_intp intp_t # <<<<<<<<<<<<<< @@ -663,7 +1047,7 @@ typedef npy_ulonglong __pyx_t_5numpy_ulonglong_t; */ typedef npy_intp __pyx_t_5numpy_intp_t; -/* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":758 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":809 * * ctypedef npy_intp intp_t * ctypedef npy_uintp uintp_t # <<<<<<<<<<<<<< @@ -672,7 +1056,7 @@ typedef npy_intp __pyx_t_5numpy_intp_t; */ typedef npy_uintp __pyx_t_5numpy_uintp_t; -/* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":760 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":811 * ctypedef npy_uintp uintp_t * * ctypedef npy_double float_t # <<<<<<<<<<<<<< @@ -681,7 +1065,7 @@ typedef npy_uintp __pyx_t_5numpy_uintp_t; */ typedef npy_double __pyx_t_5numpy_float_t; -/* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":761 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":812 * * ctypedef npy_double float_t * ctypedef npy_double double_t # <<<<<<<<<<<<<< @@ -690,7 +1074,7 @@ typedef npy_double __pyx_t_5numpy_float_t; */ typedef npy_double __pyx_t_5numpy_double_t; -/* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":762 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":813 * ctypedef npy_double float_t * ctypedef npy_double double_t * ctypedef npy_longdouble longdouble_t # <<<<<<<<<<<<<< @@ -698,6 +1082,7 @@ typedef npy_double __pyx_t_5numpy_double_t; * ctypedef npy_cfloat cfloat_t */ typedef npy_longdouble __pyx_t_5numpy_longdouble_t; +/* Declarations.proto */ #if CYTHON_CCOMPLEX #ifdef __cplusplus typedef ::std::complex< float > __pyx_t_float_complex; @@ -707,7 +1092,9 @@ typedef npy_longdouble __pyx_t_5numpy_longdouble_t; #else typedef struct { float real, imag; } __pyx_t_float_complex; #endif +static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float, float); +/* Declarations.proto */ #if CYTHON_CCOMPLEX #ifdef __cplusplus typedef ::std::complex< double > __pyx_t_double_complex; @@ -717,11 +1104,12 @@ typedef npy_longdouble __pyx_t_5numpy_longdouble_t; #else typedef struct { double real, imag; } __pyx_t_double_complex; #endif +static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double, double); /*--- Type declarations ---*/ -/* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":764 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":815 * ctypedef npy_longdouble longdouble_t * * ctypedef npy_cfloat cfloat_t # <<<<<<<<<<<<<< @@ -730,7 +1118,7 @@ typedef npy_longdouble __pyx_t_5numpy_longdouble_t; */ typedef npy_cfloat __pyx_t_5numpy_cfloat_t; -/* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":765 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":816 * * ctypedef npy_cfloat cfloat_t * ctypedef npy_cdouble cdouble_t # <<<<<<<<<<<<<< @@ -739,7 +1127,7 @@ typedef npy_cfloat __pyx_t_5numpy_cfloat_t; */ typedef npy_cdouble __pyx_t_5numpy_cdouble_t; -/* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":766 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":817 * ctypedef npy_cfloat cfloat_t * ctypedef npy_cdouble cdouble_t * ctypedef npy_clongdouble clongdouble_t # <<<<<<<<<<<<<< @@ -748,7 +1136,7 @@ typedef npy_cdouble __pyx_t_5numpy_cdouble_t; */ typedef npy_clongdouble __pyx_t_5numpy_clongdouble_t; -/* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":768 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":819 * ctypedef npy_clongdouble clongdouble_t * * ctypedef npy_cdouble complex_t # <<<<<<<<<<<<<< @@ -758,6 +1146,7 @@ typedef npy_clongdouble __pyx_t_5numpy_clongdouble_t; typedef npy_cdouble __pyx_t_5numpy_complex_t; /* --- Runtime support code (head) --- */ +/* Refnanny.proto */ #ifndef CYTHON_REFNANNY #define CYTHON_REFNANNY 0 #endif @@ -820,94 +1209,246 @@ typedef npy_cdouble __pyx_t_5numpy_complex_t; #define __Pyx_CLEAR(r) do { PyObject* tmp = ((PyObject*)(r)); r = NULL; __Pyx_DECREF(tmp);} while(0) #define __Pyx_XCLEAR(r) do { if((r) != NULL) {PyObject* tmp = ((PyObject*)(r)); r = NULL; __Pyx_DECREF(tmp);}} while(0) -#if CYTHON_COMPILING_IN_CPYTHON -static CYTHON_INLINE PyObject* __Pyx_PyObject_GetAttrStr(PyObject* obj, PyObject* attr_name) { - PyTypeObject* tp = Py_TYPE(obj); - if (likely(tp->tp_getattro)) - return tp->tp_getattro(obj, attr_name); -#if PY_MAJOR_VERSION < 3 - if (likely(tp->tp_getattr)) - return tp->tp_getattr(obj, PyString_AS_STRING(attr_name)); -#endif - return PyObject_GetAttr(obj, attr_name); -} +/* PyObjectGetAttrStr.proto */ +#if CYTHON_USE_TYPE_SLOTS +static CYTHON_INLINE PyObject* __Pyx_PyObject_GetAttrStr(PyObject* obj, PyObject* attr_name); #else #define __Pyx_PyObject_GetAttrStr(o,n) PyObject_GetAttr(o,n) #endif +/* GetBuiltinName.proto */ static PyObject *__Pyx_GetBuiltinName(PyObject *name); +/* RaiseArgTupleInvalid.proto */ static void __Pyx_RaiseArgtupleInvalid(const char* func_name, int exact, Py_ssize_t num_min, Py_ssize_t num_max, Py_ssize_t num_found); +/* RaiseDoubleKeywords.proto */ static void __Pyx_RaiseDoubleKeywordsError(const char* func_name, PyObject* kw_name); +/* ParseKeywords.proto */ static int __Pyx_ParseOptionalKeywords(PyObject *kwds, PyObject **argnames[],\ PyObject *kwds2, PyObject *values[], Py_ssize_t num_pos_args,\ const char* function_name); -static CYTHON_INLINE int __Pyx_ArgTypeTest(PyObject *obj, PyTypeObject *type, int none_allowed, - const char *name, int exact); +/* ArgTypeTest.proto */ +#define __Pyx_ArgTypeTest(obj, type, none_allowed, name, exact)\ + ((likely((Py_TYPE(obj) == type) | (none_allowed && (obj == Py_None)))) ? 1 :\ + __Pyx__ArgTypeTest(obj, type, name, exact)) +static int __Pyx__ArgTypeTest(PyObject *obj, PyTypeObject *type, const char *name, int exact); -static CYTHON_INLINE int __Pyx_GetBufferAndValidate(Py_buffer* buf, PyObject* obj, +/* IsLittleEndian.proto */ +static CYTHON_INLINE int __Pyx_Is_Little_Endian(void); + +/* BufferFormatCheck.proto */ +static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const char* ts); +static void __Pyx_BufFmt_Init(__Pyx_BufFmt_Context* ctx, + __Pyx_BufFmt_StackElem* stack, + __Pyx_TypeInfo* type); + +/* BufferGetAndValidate.proto */ +#define __Pyx_GetBufferAndValidate(buf, obj, dtype, flags, nd, cast, stack)\ + ((obj == Py_None || obj == NULL) ?\ + (__Pyx_ZeroBuffer(buf), 0) :\ + __Pyx__GetBufferAndValidate(buf, obj, dtype, flags, nd, cast, stack)) +static int __Pyx__GetBufferAndValidate(Py_buffer* buf, PyObject* obj, __Pyx_TypeInfo* dtype, int flags, int nd, int cast, __Pyx_BufFmt_StackElem* stack); +static void __Pyx_ZeroBuffer(Py_buffer* buf); static CYTHON_INLINE void __Pyx_SafeReleaseBuffer(Py_buffer* info); +static Py_ssize_t __Pyx_minusones[] = { -1, -1, -1, -1, -1, -1, -1, -1 }; +static Py_ssize_t __Pyx_zeros[] = { 0, 0, 0, 0, 0, 0, 0, 0 }; -static CYTHON_INLINE PyObject *__Pyx_GetModuleGlobalName(PyObject *name); +/* GetModuleGlobalName.proto */ +#if CYTHON_USE_DICT_VERSIONS +#define __Pyx_GetModuleGlobalName(var, name) {\ + static PY_UINT64_T __pyx_dict_version = 0;\ + static PyObject *__pyx_dict_cached_value = NULL;\ + (var) = (likely(__pyx_dict_version == __PYX_GET_DICT_VERSION(__pyx_d))) ?\ + (likely(__pyx_dict_cached_value) ? __Pyx_NewRef(__pyx_dict_cached_value) : __Pyx_GetBuiltinName(name)) :\ + __Pyx__GetModuleGlobalName(name, &__pyx_dict_version, &__pyx_dict_cached_value);\ +} +#define __Pyx_GetModuleGlobalNameUncached(var, name) {\ + PY_UINT64_T __pyx_dict_version;\ + PyObject *__pyx_dict_cached_value;\ + (var) = __Pyx__GetModuleGlobalName(name, &__pyx_dict_version, &__pyx_dict_cached_value);\ +} +static PyObject *__Pyx__GetModuleGlobalName(PyObject *name, PY_UINT64_T *dict_version, PyObject **dict_cached_value); +#else +#define __Pyx_GetModuleGlobalName(var, name) (var) = __Pyx__GetModuleGlobalName(name) +#define __Pyx_GetModuleGlobalNameUncached(var, name) (var) = __Pyx__GetModuleGlobalName(name) +static CYTHON_INLINE PyObject *__Pyx__GetModuleGlobalName(PyObject *name); +#endif +/* PyCFunctionFastCall.proto */ +#if CYTHON_FAST_PYCCALL +static CYTHON_INLINE PyObject *__Pyx_PyCFunction_FastCall(PyObject *func, PyObject **args, Py_ssize_t nargs); +#else +#define __Pyx_PyCFunction_FastCall(func, args, nargs) (assert(0), NULL) +#endif + +/* PyFunctionFastCall.proto */ +#if CYTHON_FAST_PYCALL +#define __Pyx_PyFunction_FastCall(func, args, nargs)\ + __Pyx_PyFunction_FastCallDict((func), (args), (nargs), NULL) +#if 1 || PY_VERSION_HEX < 0x030600B1 +static PyObject *__Pyx_PyFunction_FastCallDict(PyObject *func, PyObject **args, int nargs, PyObject *kwargs); +#else +#define __Pyx_PyFunction_FastCallDict(func, args, nargs, kwargs) _PyFunction_FastCallDict(func, args, nargs, kwargs) +#endif +#define __Pyx_BUILD_ASSERT_EXPR(cond)\ + (sizeof(char [1 - 2*!(cond)]) - 1) +#ifndef Py_MEMBER_SIZE +#define Py_MEMBER_SIZE(type, member) sizeof(((type *)0)->member) +#endif + static size_t __pyx_pyframe_localsplus_offset = 0; + #include "frameobject.h" + #define __Pxy_PyFrame_Initialize_Offsets()\ + ((void)__Pyx_BUILD_ASSERT_EXPR(sizeof(PyFrameObject) == offsetof(PyFrameObject, f_localsplus) + Py_MEMBER_SIZE(PyFrameObject, f_localsplus)),\ + (void)(__pyx_pyframe_localsplus_offset = ((size_t)PyFrame_Type.tp_basicsize) - Py_MEMBER_SIZE(PyFrameObject, f_localsplus))) + #define __Pyx_PyFrame_GetLocalsplus(frame)\ + (assert(__pyx_pyframe_localsplus_offset), (PyObject **)(((char *)(frame)) + __pyx_pyframe_localsplus_offset)) +#endif + +/* PyObjectCall.proto */ #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyObject_Call(PyObject *func, PyObject *arg, PyObject *kw); #else #define __Pyx_PyObject_Call(func, arg, kw) PyObject_Call(func, arg, kw) #endif +/* PyObjectCall2Args.proto */ +static CYTHON_UNUSED PyObject* __Pyx_PyObject_Call2Args(PyObject* function, PyObject* arg1, PyObject* arg2); + +/* PyObjectCallMethO.proto */ #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyObject_CallMethO(PyObject *func, PyObject *arg); #endif +/* PyObjectCallOneArg.proto */ static CYTHON_INLINE PyObject* __Pyx_PyObject_CallOneArg(PyObject *func, PyObject *arg); +/* ExtTypeTest.proto */ static CYTHON_INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type); #define __Pyx_BufPtrStrided1d(type, buf, i0, s0) (type)((char*)buf + i0 * s0) #define __Pyx_BufPtrStrided2d(type, buf, i0, s0, i1, s1) (type)((char*)buf + i0 * s0 + i1 * s1) #define __Pyx_BufPtrCContig2d(type, buf, i0, s0, i1, s1) ((type)((char*)buf + i0 * s0) + i1) -static CYTHON_INLINE void __Pyx_ErrRestore(PyObject *type, PyObject *value, PyObject *tb); -static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb); - -static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause); - -#if PY_MAJOR_VERSION >= 3 && !CYTHON_COMPILING_IN_PYPY -static PyObject *__Pyx_PyDict_GetItem(PyObject *d, PyObject* key) { - PyObject *value; - value = PyDict_GetItemWithError(d, key); - if (unlikely(!value)) { - if (!PyErr_Occurred()) { - PyObject* args = PyTuple_Pack(1, key); - if (likely(args)) - PyErr_SetObject(PyExc_KeyError, args); - Py_XDECREF(args); - } - return NULL; - } - Py_INCREF(value); - return value; -} +/* PyThreadStateGet.proto */ +#if CYTHON_FAST_THREAD_STATE +#define __Pyx_PyThreadState_declare PyThreadState *__pyx_tstate; +#define __Pyx_PyThreadState_assign __pyx_tstate = __Pyx_PyThreadState_Current; +#define __Pyx_PyErr_Occurred() __pyx_tstate->curexc_type #else - #define __Pyx_PyDict_GetItem(d, key) PyObject_GetItem(d, key) +#define __Pyx_PyThreadState_declare +#define __Pyx_PyThreadState_assign +#define __Pyx_PyErr_Occurred() PyErr_Occurred() #endif +/* PyErrFetchRestore.proto */ +#if CYTHON_FAST_THREAD_STATE +#define __Pyx_PyErr_Clear() __Pyx_ErrRestore(NULL, NULL, NULL) +#define __Pyx_ErrRestoreWithState(type, value, tb) __Pyx_ErrRestoreInState(PyThreadState_GET(), type, value, tb) +#define __Pyx_ErrFetchWithState(type, value, tb) __Pyx_ErrFetchInState(PyThreadState_GET(), type, value, tb) +#define __Pyx_ErrRestore(type, value, tb) __Pyx_ErrRestoreInState(__pyx_tstate, type, value, tb) +#define __Pyx_ErrFetch(type, value, tb) __Pyx_ErrFetchInState(__pyx_tstate, type, value, tb) +static CYTHON_INLINE void __Pyx_ErrRestoreInState(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb); +static CYTHON_INLINE void __Pyx_ErrFetchInState(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb); +#if CYTHON_COMPILING_IN_CPYTHON +#define __Pyx_PyErr_SetNone(exc) (Py_INCREF(exc), __Pyx_ErrRestore((exc), NULL, NULL)) +#else +#define __Pyx_PyErr_SetNone(exc) PyErr_SetNone(exc) +#endif +#else +#define __Pyx_PyErr_Clear() PyErr_Clear() +#define __Pyx_PyErr_SetNone(exc) PyErr_SetNone(exc) +#define __Pyx_ErrRestoreWithState(type, value, tb) PyErr_Restore(type, value, tb) +#define __Pyx_ErrFetchWithState(type, value, tb) PyErr_Fetch(type, value, tb) +#define __Pyx_ErrRestoreInState(tstate, type, value, tb) PyErr_Restore(type, value, tb) +#define __Pyx_ErrFetchInState(tstate, type, value, tb) PyErr_Fetch(type, value, tb) +#define __Pyx_ErrRestore(type, value, tb) PyErr_Restore(type, value, tb) +#define __Pyx_ErrFetch(type, value, tb) PyErr_Fetch(type, value, tb) +#endif + +/* RaiseException.proto */ +static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause); + +/* DictGetItem.proto */ +#if PY_MAJOR_VERSION >= 3 && !CYTHON_COMPILING_IN_PYPY +static PyObject *__Pyx_PyDict_GetItem(PyObject *d, PyObject* key); +#define __Pyx_PyObject_Dict_GetItem(obj, name)\ + (likely(PyDict_CheckExact(obj)) ?\ + __Pyx_PyDict_GetItem(obj, name) : PyObject_GetItem(obj, name)) +#else +#define __Pyx_PyDict_GetItem(d, key) PyObject_GetItem(d, key) +#define __Pyx_PyObject_Dict_GetItem(obj, name) PyObject_GetItem(obj, name) +#endif + +/* RaiseTooManyValuesToUnpack.proto */ static CYTHON_INLINE void __Pyx_RaiseTooManyValuesError(Py_ssize_t expected); +/* RaiseNeedMoreValuesToUnpack.proto */ static CYTHON_INLINE void __Pyx_RaiseNeedMoreValuesError(Py_ssize_t index); +/* RaiseNoneIterError.proto */ static CYTHON_INLINE void __Pyx_RaiseNoneNotIterableError(void); +/* GetTopmostException.proto */ +#if CYTHON_USE_EXC_INFO_STACK +static _PyErr_StackItem * __Pyx_PyErr_GetTopmostException(PyThreadState *tstate); +#endif + +/* SaveResetException.proto */ +#if CYTHON_FAST_THREAD_STATE +#define __Pyx_ExceptionSave(type, value, tb) __Pyx__ExceptionSave(__pyx_tstate, type, value, tb) +static CYTHON_INLINE void __Pyx__ExceptionSave(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb); +#define __Pyx_ExceptionReset(type, value, tb) __Pyx__ExceptionReset(__pyx_tstate, type, value, tb) +static CYTHON_INLINE void __Pyx__ExceptionReset(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb); +#else +#define __Pyx_ExceptionSave(type, value, tb) PyErr_GetExcInfo(type, value, tb) +#define __Pyx_ExceptionReset(type, value, tb) PyErr_SetExcInfo(type, value, tb) +#endif + +/* PyErrExceptionMatches.proto */ +#if CYTHON_FAST_THREAD_STATE +#define __Pyx_PyErr_ExceptionMatches(err) __Pyx_PyErr_ExceptionMatchesInState(__pyx_tstate, err) +static CYTHON_INLINE int __Pyx_PyErr_ExceptionMatchesInState(PyThreadState* tstate, PyObject* err); +#else +#define __Pyx_PyErr_ExceptionMatches(err) PyErr_ExceptionMatches(err) +#endif + +/* GetException.proto */ +#if CYTHON_FAST_THREAD_STATE +#define __Pyx_GetException(type, value, tb) __Pyx__GetException(__pyx_tstate, type, value, tb) +static int __Pyx__GetException(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb); +#else +static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb); +#endif + +/* TypeImport.proto */ +#ifndef __PYX_HAVE_RT_ImportType_proto +#define __PYX_HAVE_RT_ImportType_proto +enum __Pyx_ImportType_CheckSize { + __Pyx_ImportType_CheckSize_Error = 0, + __Pyx_ImportType_CheckSize_Warn = 1, + __Pyx_ImportType_CheckSize_Ignore = 2 +}; +static PyTypeObject *__Pyx_ImportType(PyObject* module, const char *module_name, const char *class_name, size_t size, enum __Pyx_ImportType_CheckSize check_size); +#endif + +/* Import.proto */ static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level); +/* CLineInTraceback.proto */ +#ifdef CYTHON_CLINE_IN_TRACEBACK +#define __Pyx_CLineForTraceback(tstate, c_line) (((CYTHON_CLINE_IN_TRACEBACK)) ? c_line : 0) +#else +static int __Pyx_CLineForTraceback(PyThreadState *tstate, int c_line); +#endif + +/* CodeObjectCache.proto */ typedef struct { - int code_line; PyCodeObject* code_object; + int code_line; } __Pyx_CodeObjectCacheEntry; struct __Pyx_CodeObjectCache { int count; @@ -919,9 +1460,11 @@ static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int co static PyCodeObject *__pyx_find_code_object(int code_line); static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object); +/* AddTraceback.proto */ static void __Pyx_AddTraceback(const char *funcname, int c_line, int py_line, const char *filename); +/* BufferStructDeclare.proto */ typedef struct { Py_ssize_t shape, strides, suboffsets; } __Pyx_Buf_DimInfo; @@ -944,17 +1487,10 @@ typedef struct { #endif -static Py_ssize_t __Pyx_zeros[] = {0, 0, 0, 0, 0, 0, 0, 0}; -static Py_ssize_t __Pyx_minusones[] = {-1, -1, -1, -1, -1, -1, -1, -1}; - -static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *); - +/* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value); -#ifndef __PYX_FORCE_INIT_THREADS - #define __PYX_FORCE_INIT_THREADS 0 -#endif - +/* RealImag.proto */ #if CYTHON_CCOMPLEX #ifdef __cplusplus #define __Pyx_CREAL(z) ((z).real()) @@ -967,7 +1503,8 @@ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value); #define __Pyx_CREAL(z) ((z).real) #define __Pyx_CIMAG(z) ((z).imag) #endif -#if (defined(_WIN32) || defined(__clang__)) && defined(__cplusplus) && CYTHON_CCOMPLEX +#if defined(__cplusplus) && CYTHON_CCOMPLEX\ + && (defined(_WIN32) || defined(__clang__) || (defined(__GNUC__) && (__GNUC__ >= 5 || __GNUC__ == 4 && __GNUC_MINOR__ >= 4 )) || __cplusplus >= 201103) #define __Pyx_SET_CREAL(z,x) ((z).real(x)) #define __Pyx_SET_CIMAG(z,y) ((z).imag(y)) #else @@ -975,104 +1512,111 @@ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value); #define __Pyx_SET_CIMAG(z,y) __Pyx_CIMAG(z) = (y) #endif -static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float, float); - +/* Arithmetic.proto */ #if CYTHON_CCOMPLEX - #define __Pyx_c_eqf(a, b) ((a)==(b)) - #define __Pyx_c_sumf(a, b) ((a)+(b)) - #define __Pyx_c_difff(a, b) ((a)-(b)) - #define __Pyx_c_prodf(a, b) ((a)*(b)) - #define __Pyx_c_quotf(a, b) ((a)/(b)) - #define __Pyx_c_negf(a) (-(a)) + #define __Pyx_c_eq_float(a, b) ((a)==(b)) + #define __Pyx_c_sum_float(a, b) ((a)+(b)) + #define __Pyx_c_diff_float(a, b) ((a)-(b)) + #define __Pyx_c_prod_float(a, b) ((a)*(b)) + #define __Pyx_c_quot_float(a, b) ((a)/(b)) + #define __Pyx_c_neg_float(a) (-(a)) #ifdef __cplusplus - #define __Pyx_c_is_zerof(z) ((z)==(float)0) - #define __Pyx_c_conjf(z) (::std::conj(z)) + #define __Pyx_c_is_zero_float(z) ((z)==(float)0) + #define __Pyx_c_conj_float(z) (::std::conj(z)) #if 1 - #define __Pyx_c_absf(z) (::std::abs(z)) - #define __Pyx_c_powf(a, b) (::std::pow(a, b)) + #define __Pyx_c_abs_float(z) (::std::abs(z)) + #define __Pyx_c_pow_float(a, b) (::std::pow(a, b)) #endif #else - #define __Pyx_c_is_zerof(z) ((z)==0) - #define __Pyx_c_conjf(z) (conjf(z)) + #define __Pyx_c_is_zero_float(z) ((z)==0) + #define __Pyx_c_conj_float(z) (conjf(z)) #if 1 - #define __Pyx_c_absf(z) (cabsf(z)) - #define __Pyx_c_powf(a, b) (cpowf(a, b)) + #define __Pyx_c_abs_float(z) (cabsf(z)) + #define __Pyx_c_pow_float(a, b) (cpowf(a, b)) #endif #endif #else - static CYTHON_INLINE int __Pyx_c_eqf(__pyx_t_float_complex, __pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sumf(__pyx_t_float_complex, __pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_difff(__pyx_t_float_complex, __pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_prodf(__pyx_t_float_complex, __pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quotf(__pyx_t_float_complex, __pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_negf(__pyx_t_float_complex); - static CYTHON_INLINE int __Pyx_c_is_zerof(__pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conjf(__pyx_t_float_complex); + static CYTHON_INLINE int __Pyx_c_eq_float(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sum_float(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_diff_float(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_prod_float(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quot_float(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_neg_float(__pyx_t_float_complex); + static CYTHON_INLINE int __Pyx_c_is_zero_float(__pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conj_float(__pyx_t_float_complex); #if 1 - static CYTHON_INLINE float __Pyx_c_absf(__pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_powf(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE float __Pyx_c_abs_float(__pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_pow_float(__pyx_t_float_complex, __pyx_t_float_complex); #endif #endif -static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double, double); - +/* Arithmetic.proto */ #if CYTHON_CCOMPLEX - #define __Pyx_c_eq(a, b) ((a)==(b)) - #define __Pyx_c_sum(a, b) ((a)+(b)) - #define __Pyx_c_diff(a, b) ((a)-(b)) - #define __Pyx_c_prod(a, b) ((a)*(b)) - #define __Pyx_c_quot(a, b) ((a)/(b)) - #define __Pyx_c_neg(a) (-(a)) + #define __Pyx_c_eq_double(a, b) ((a)==(b)) + #define __Pyx_c_sum_double(a, b) ((a)+(b)) + #define __Pyx_c_diff_double(a, b) ((a)-(b)) + #define __Pyx_c_prod_double(a, b) ((a)*(b)) + #define __Pyx_c_quot_double(a, b) ((a)/(b)) + #define __Pyx_c_neg_double(a) (-(a)) #ifdef __cplusplus - #define __Pyx_c_is_zero(z) ((z)==(double)0) - #define __Pyx_c_conj(z) (::std::conj(z)) + #define __Pyx_c_is_zero_double(z) ((z)==(double)0) + #define __Pyx_c_conj_double(z) (::std::conj(z)) #if 1 - #define __Pyx_c_abs(z) (::std::abs(z)) - #define __Pyx_c_pow(a, b) (::std::pow(a, b)) + #define __Pyx_c_abs_double(z) (::std::abs(z)) + #define __Pyx_c_pow_double(a, b) (::std::pow(a, b)) #endif #else - #define __Pyx_c_is_zero(z) ((z)==0) - #define __Pyx_c_conj(z) (conj(z)) + #define __Pyx_c_is_zero_double(z) ((z)==0) + #define __Pyx_c_conj_double(z) (conj(z)) #if 1 - #define __Pyx_c_abs(z) (cabs(z)) - #define __Pyx_c_pow(a, b) (cpow(a, b)) + #define __Pyx_c_abs_double(z) (cabs(z)) + #define __Pyx_c_pow_double(a, b) (cpow(a, b)) #endif #endif #else - static CYTHON_INLINE int __Pyx_c_eq(__pyx_t_double_complex, __pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum(__pyx_t_double_complex, __pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff(__pyx_t_double_complex, __pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_prod(__pyx_t_double_complex, __pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot(__pyx_t_double_complex, __pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg(__pyx_t_double_complex); - static CYTHON_INLINE int __Pyx_c_is_zero(__pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj(__pyx_t_double_complex); + static CYTHON_INLINE int __Pyx_c_eq_double(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum_double(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff_double(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_prod_double(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot_double(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg_double(__pyx_t_double_complex); + static CYTHON_INLINE int __Pyx_c_is_zero_double(__pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj_double(__pyx_t_double_complex); #if 1 - static CYTHON_INLINE double __Pyx_c_abs(__pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE double __Pyx_c_abs_double(__pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow_double(__pyx_t_double_complex, __pyx_t_double_complex); #endif #endif +/* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_enum__NPY_TYPES(enum NPY_TYPES value); +/* CIntFromPy.proto */ +static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *); + +/* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value); +/* CIntFromPy.proto */ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *); +/* FastTypeChecks.proto */ +#if CYTHON_COMPILING_IN_CPYTHON +#define __Pyx_TypeCheck(obj, type) __Pyx_IsSubtype(Py_TYPE(obj), (PyTypeObject *)type) +static CYTHON_INLINE int __Pyx_IsSubtype(PyTypeObject *a, PyTypeObject *b); +static CYTHON_INLINE int __Pyx_PyErr_GivenExceptionMatches(PyObject *err, PyObject *type); +static CYTHON_INLINE int __Pyx_PyErr_GivenExceptionMatches2(PyObject *err, PyObject *type1, PyObject *type2); +#else +#define __Pyx_TypeCheck(obj, type) PyObject_TypeCheck(obj, (PyTypeObject *)type) +#define __Pyx_PyErr_GivenExceptionMatches(err, type) PyErr_GivenExceptionMatches(err, type) +#define __Pyx_PyErr_GivenExceptionMatches2(err, type1, type2) (PyErr_GivenExceptionMatches(err, type1) || PyErr_GivenExceptionMatches(err, type2)) +#endif +#define __Pyx_PyException_Check(obj) __Pyx_TypeCheck(obj, PyExc_Exception) + +/* CheckBinaryVersion.proto */ static int __Pyx_check_binary_version(void); -#if !defined(__Pyx_PyIdentifier_FromString) -#if PY_MAJOR_VERSION < 3 - #define __Pyx_PyIdentifier_FromString(s) PyString_FromString(s) -#else - #define __Pyx_PyIdentifier_FromString(s) PyUnicode_FromString(s) -#endif -#endif - -static PyObject *__Pyx_ImportModule(const char *name); - -static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name, size_t size, int strict); - +/* InitStrings.proto */ static int __Pyx_InitStrings(__Pyx_StringTabEntry *t); @@ -1095,7 +1639,7 @@ static PyTypeObject *__pyx_ptype_7cpython_4type_type = 0; /* Module declarations from 'cpython.ref' */ -/* Module declarations from 'libc.stdlib' */ +/* Module declarations from 'cpython.mem' */ /* Module declarations from 'numpy' */ @@ -1107,74 +1651,68 @@ static PyTypeObject *__pyx_ptype_5numpy_ndarray = 0; static PyTypeObject *__pyx_ptype_5numpy_ufunc = 0; static CYTHON_INLINE char *__pyx_f_5numpy__util_dtypestring(PyArray_Descr *, char *, char *, int *); /*proto*/ -/* Module declarations from 'GPy.kern._src.coregionalize_cython' */ +/* Module declarations from 'GPy.kern.src.coregionalize_cython' */ static __Pyx_TypeInfo __Pyx_TypeInfo_double = { "double", NULL, sizeof(double), { 0 }, 0, 'R', 0, 0 }; static __Pyx_TypeInfo __Pyx_TypeInfo_nn___pyx_t_5numpy_int64_t = { "int64_t", NULL, sizeof(__pyx_t_5numpy_int64_t), { 0 }, 0, IS_UNSIGNED(__pyx_t_5numpy_int64_t) ? 'U' : 'I', IS_UNSIGNED(__pyx_t_5numpy_int64_t), 0 }; static __Pyx_TypeInfo __Pyx_TypeInfo_nn___pyx_t_5numpy_double_t = { "double_t", NULL, sizeof(__pyx_t_5numpy_double_t), { 0 }, 0, 'R', 0, 0 }; -#define __Pyx_MODULE_NAME "GPy.kern._src.coregionalize_cython" -int __pyx_module_is_main_GPy__kern___src__coregionalize_cython = 0; +#define __Pyx_MODULE_NAME "GPy.kern.src.coregionalize_cython" +extern int __pyx_module_is_main_GPy__kern__src__coregionalize_cython; +int __pyx_module_is_main_GPy__kern__src__coregionalize_cython = 0; -/* Implementation of 'GPy.kern._src.coregionalize_cython' */ +/* Implementation of 'GPy.kern.src.coregionalize_cython' */ static PyObject *__pyx_builtin_range; static PyObject *__pyx_builtin_ValueError; static PyObject *__pyx_builtin_RuntimeError; -static char __pyx_k_B[] = "B"; -static char __pyx_k_D[] = "D"; -static char __pyx_k_H[] = "H"; -static char __pyx_k_I[] = "I"; -static char __pyx_k_K[] = "K"; -static char __pyx_k_L[] = "L"; -static char __pyx_k_M[] = "M"; -static char __pyx_k_N[] = "N"; -static char __pyx_k_O[] = "O"; -static char __pyx_k_Q[] = "Q"; -static char __pyx_k_X[] = "X"; -static char __pyx_k_b[] = "b"; -static char __pyx_k_d[] = "d"; -static char __pyx_k_f[] = "f"; -static char __pyx_k_g[] = "g"; -static char __pyx_k_h[] = "h"; -static char __pyx_k_i[] = "i"; -static char __pyx_k_j[] = "j"; -static char __pyx_k_l[] = "l"; -static char __pyx_k_m[] = "m"; -static char __pyx_k_n[] = "n"; -static char __pyx_k_q[] = "q"; -static char __pyx_k_X2[] = "X2"; -static char __pyx_k_Zd[] = "Zd"; -static char __pyx_k_Zf[] = "Zf"; -static char __pyx_k_Zg[] = "Zg"; -static char __pyx_k_np[] = "np"; -static char __pyx_k_main[] = "__main__"; -static char __pyx_k_size[] = "size"; -static char __pyx_k_test[] = "__test__"; -static char __pyx_k_dL_dK[] = "dL_dK"; -static char __pyx_k_empty[] = "empty"; -static char __pyx_k_index[] = "index"; -static char __pyx_k_numpy[] = "numpy"; -static char __pyx_k_range[] = "range"; -static char __pyx_k_zeros[] = "zeros"; -static char __pyx_k_import[] = "__import__"; -static char __pyx_k_index2[] = "index2"; -static char __pyx_k_ValueError[] = "ValueError"; -static char __pyx_k_K_symmetric[] = "K_symmetric"; -static char __pyx_k_dL_dK_small[] = "dL_dK_small"; -static char __pyx_k_K_asymmetric[] = "K_asymmetric"; -static char __pyx_k_RuntimeError[] = "RuntimeError"; -static char __pyx_k_gradient_reduce[] = "gradient_reduce"; -static char __pyx_k_ndarray_is_not_C_contiguous[] = "ndarray is not C contiguous"; -static char __pyx_k_home_david_gits_GPy_GPy_kern__s[] = "/home/david/gits/GPy/GPy/kern/_src/coregionalize_cython.pyx"; -static char __pyx_k_unknown_dtype_code_in_numpy_pxd[] = "unknown dtype code in numpy.pxd (%d)"; -static char __pyx_k_Format_string_allocated_too_shor[] = "Format string allocated too short, see comment in numpy.pxd"; -static char __pyx_k_GPy_kern__src_coregionalize_cyth[] = "GPy.kern._src.coregionalize_cython"; -static char __pyx_k_Non_native_byte_order_not_suppor[] = "Non-native byte order not supported"; -static char __pyx_k_ndarray_is_not_Fortran_contiguou[] = "ndarray is not Fortran contiguous"; -static char __pyx_k_Format_string_allocated_too_shor_2[] = "Format string allocated too short."; +static PyObject *__pyx_builtin_ImportError; +static const char __pyx_k_B[] = "B"; +static const char __pyx_k_D[] = "D"; +static const char __pyx_k_K[] = "K"; +static const char __pyx_k_M[] = "M"; +static const char __pyx_k_N[] = "N"; +static const char __pyx_k_X[] = "X"; +static const char __pyx_k_i[] = "i"; +static const char __pyx_k_j[] = "j"; +static const char __pyx_k_m[] = "m"; +static const char __pyx_k_n[] = "n"; +static const char __pyx_k_X2[] = "X2"; +static const char __pyx_k_np[] = "np"; +static const char __pyx_k_main[] = "__main__"; +static const char __pyx_k_name[] = "__name__"; +static const char __pyx_k_size[] = "size"; +static const char __pyx_k_test[] = "__test__"; +static const char __pyx_k_dL_dK[] = "dL_dK"; +static const char __pyx_k_empty[] = "empty"; +static const char __pyx_k_index[] = "index"; +static const char __pyx_k_numpy[] = "numpy"; +static const char __pyx_k_range[] = "range"; +static const char __pyx_k_zeros[] = "zeros"; +static const char __pyx_k_import[] = "__import__"; +static const char __pyx_k_index2[] = "index2"; +static const char __pyx_k_ValueError[] = "ValueError"; +static const char __pyx_k_ImportError[] = "ImportError"; +static const char __pyx_k_K_symmetric[] = "K_symmetric"; +static const char __pyx_k_dL_dK_small[] = "dL_dK_small"; +static const char __pyx_k_K_asymmetric[] = "K_asymmetric"; +static const char __pyx_k_RuntimeError[] = "RuntimeError"; +static const char __pyx_k_gradient_reduce[] = "gradient_reduce"; +static const char __pyx_k_cline_in_traceback[] = "cline_in_traceback"; +static const char __pyx_k_ndarray_is_not_C_contiguous[] = "ndarray is not C contiguous"; +static const char __pyx_k_numpy_core_multiarray_failed_to[] = "numpy.core.multiarray failed to import"; +static const char __pyx_k_unknown_dtype_code_in_numpy_pxd[] = "unknown dtype code in numpy.pxd (%d)"; +static const char __pyx_k_Format_string_allocated_too_shor[] = "Format string allocated too short, see comment in numpy.pxd"; +static const char __pyx_k_GPy_kern_src_coregionalize_cytho[] = "GPy/kern/src/coregionalize_cython.pyx"; +static const char __pyx_k_Non_native_byte_order_not_suppor[] = "Non-native byte order not supported"; +static const char __pyx_k_ndarray_is_not_Fortran_contiguou[] = "ndarray is not Fortran contiguous"; +static const char __pyx_k_numpy_core_umath_failed_to_impor[] = "numpy.core.umath failed to import"; +static const char __pyx_k_Format_string_allocated_too_shor_2[] = "Format string allocated too short."; +static const char __pyx_k_GPy_kern_src_coregionalize_cytho_2[] = "GPy.kern.src.coregionalize_cython"; static PyObject *__pyx_n_s_B; static PyObject *__pyx_n_s_D; static PyObject *__pyx_kp_u_Format_string_allocated_too_shor; static PyObject *__pyx_kp_u_Format_string_allocated_too_shor_2; -static PyObject *__pyx_n_s_GPy_kern__src_coregionalize_cyth; +static PyObject *__pyx_kp_s_GPy_kern_src_coregionalize_cytho; +static PyObject *__pyx_n_s_GPy_kern_src_coregionalize_cytho_2; +static PyObject *__pyx_n_s_ImportError; static PyObject *__pyx_n_s_K; static PyObject *__pyx_n_s_K_asymmetric; static PyObject *__pyx_n_s_K_symmetric; @@ -1185,11 +1723,11 @@ static PyObject *__pyx_n_s_RuntimeError; static PyObject *__pyx_n_s_ValueError; static PyObject *__pyx_n_s_X; static PyObject *__pyx_n_s_X2; +static PyObject *__pyx_n_s_cline_in_traceback; static PyObject *__pyx_n_s_dL_dK; static PyObject *__pyx_n_s_dL_dK_small; static PyObject *__pyx_n_s_empty; static PyObject *__pyx_n_s_gradient_reduce; -static PyObject *__pyx_kp_s_home_david_gits_GPy_GPy_kern__s; static PyObject *__pyx_n_s_i; static PyObject *__pyx_n_s_import; static PyObject *__pyx_n_s_index; @@ -1198,18 +1736,21 @@ static PyObject *__pyx_n_s_j; static PyObject *__pyx_n_s_m; static PyObject *__pyx_n_s_main; static PyObject *__pyx_n_s_n; +static PyObject *__pyx_n_s_name; static PyObject *__pyx_kp_u_ndarray_is_not_C_contiguous; static PyObject *__pyx_kp_u_ndarray_is_not_Fortran_contiguou; static PyObject *__pyx_n_s_np; static PyObject *__pyx_n_s_numpy; +static PyObject *__pyx_kp_s_numpy_core_multiarray_failed_to; +static PyObject *__pyx_kp_s_numpy_core_umath_failed_to_impor; static PyObject *__pyx_n_s_range; static PyObject *__pyx_n_s_size; static PyObject *__pyx_n_s_test; static PyObject *__pyx_kp_u_unknown_dtype_code_in_numpy_pxd; static PyObject *__pyx_n_s_zeros; -static PyObject *__pyx_pf_3GPy_4kern_4_src_20coregionalize_cython_K_symmetric(CYTHON_UNUSED PyObject *__pyx_self, PyArrayObject *__pyx_v_B, PyArrayObject *__pyx_v_X); /* proto */ -static PyObject *__pyx_pf_3GPy_4kern_4_src_20coregionalize_cython_2K_asymmetric(CYTHON_UNUSED PyObject *__pyx_self, PyArrayObject *__pyx_v_B, PyArrayObject *__pyx_v_X, PyArrayObject *__pyx_v_X2); /* proto */ -static PyObject *__pyx_pf_3GPy_4kern_4_src_20coregionalize_cython_4gradient_reduce(CYTHON_UNUSED PyObject *__pyx_self, int __pyx_v_D, PyArrayObject *__pyx_v_dL_dK, PyArrayObject *__pyx_v_index, PyArrayObject *__pyx_v_index2); /* proto */ +static PyObject *__pyx_pf_3GPy_4kern_3src_20coregionalize_cython_K_symmetric(CYTHON_UNUSED PyObject *__pyx_self, PyArrayObject *__pyx_v_B, PyArrayObject *__pyx_v_X); /* proto */ +static PyObject *__pyx_pf_3GPy_4kern_3src_20coregionalize_cython_2K_asymmetric(CYTHON_UNUSED PyObject *__pyx_self, PyArrayObject *__pyx_v_B, PyArrayObject *__pyx_v_X, PyArrayObject *__pyx_v_X2); /* proto */ +static PyObject *__pyx_pf_3GPy_4kern_3src_20coregionalize_cython_4gradient_reduce(CYTHON_UNUSED PyObject *__pyx_self, int __pyx_v_D, PyArrayObject *__pyx_v_dL_dK, PyArrayObject *__pyx_v_index, PyArrayObject *__pyx_v_index2); /* proto */ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, Py_buffer *__pyx_v_info, int __pyx_v_flags); /* proto */ static void __pyx_pf_5numpy_7ndarray_2__releasebuffer__(PyArrayObject *__pyx_v_self, Py_buffer *__pyx_v_info); /* proto */ static PyObject *__pyx_tuple_; @@ -1219,13 +1760,15 @@ static PyObject *__pyx_tuple__4; static PyObject *__pyx_tuple__5; static PyObject *__pyx_tuple__6; static PyObject *__pyx_tuple__7; -static PyObject *__pyx_tuple__9; -static PyObject *__pyx_tuple__11; -static PyObject *__pyx_codeobj__8; -static PyObject *__pyx_codeobj__10; -static PyObject *__pyx_codeobj__12; +static PyObject *__pyx_tuple__8; +static PyObject *__pyx_tuple__10; +static PyObject *__pyx_tuple__12; +static PyObject *__pyx_codeobj__9; +static PyObject *__pyx_codeobj__11; +static PyObject *__pyx_codeobj__13; +/* Late includes */ -/* "GPy/kern/_src/coregionalize_cython.pyx":8 +/* "GPy/kern/src/coregionalize_cython.pyx":8 * cimport numpy as np * * def K_symmetric(np.ndarray[double, ndim=2] B, np.ndarray[np.int64_t, ndim=1] X): # <<<<<<<<<<<<<< @@ -1234,14 +1777,11 @@ static PyObject *__pyx_codeobj__12; */ /* Python wrapper */ -static PyObject *__pyx_pw_3GPy_4kern_4_src_20coregionalize_cython_1K_symmetric(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds); /*proto*/ -static PyMethodDef __pyx_mdef_3GPy_4kern_4_src_20coregionalize_cython_1K_symmetric = {"K_symmetric", (PyCFunction)__pyx_pw_3GPy_4kern_4_src_20coregionalize_cython_1K_symmetric, METH_VARARGS|METH_KEYWORDS, 0}; -static PyObject *__pyx_pw_3GPy_4kern_4_src_20coregionalize_cython_1K_symmetric(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds) { +static PyObject *__pyx_pw_3GPy_4kern_3src_20coregionalize_cython_1K_symmetric(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds); /*proto*/ +static PyMethodDef __pyx_mdef_3GPy_4kern_3src_20coregionalize_cython_1K_symmetric = {"K_symmetric", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_4kern_3src_20coregionalize_cython_1K_symmetric, METH_VARARGS|METH_KEYWORDS, 0}; +static PyObject *__pyx_pw_3GPy_4kern_3src_20coregionalize_cython_1K_symmetric(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds) { PyArrayObject *__pyx_v_B = 0; PyArrayObject *__pyx_v_X = 0; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; PyObject *__pyx_r = 0; __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("K_symmetric (wrapper)", 0); @@ -1253,23 +1793,26 @@ static PyObject *__pyx_pw_3GPy_4kern_4_src_20coregionalize_cython_1K_symmetric(P const Py_ssize_t pos_args = PyTuple_GET_SIZE(__pyx_args); switch (pos_args) { case 2: values[1] = PyTuple_GET_ITEM(__pyx_args, 1); + CYTHON_FALLTHROUGH; case 1: values[0] = PyTuple_GET_ITEM(__pyx_args, 0); + CYTHON_FALLTHROUGH; case 0: break; default: goto __pyx_L5_argtuple_error; } kw_args = PyDict_Size(__pyx_kwds); switch (pos_args) { case 0: - if (likely((values[0] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_B)) != 0)) kw_args--; + if (likely((values[0] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_B)) != 0)) kw_args--; else goto __pyx_L5_argtuple_error; + CYTHON_FALLTHROUGH; case 1: - if (likely((values[1] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_X)) != 0)) kw_args--; + if (likely((values[1] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_X)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("K_symmetric", 1, 2, 2, 1); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 8; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("K_symmetric", 1, 2, 2, 1); __PYX_ERR(0, 8, __pyx_L3_error) } } if (unlikely(kw_args > 0)) { - if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "K_symmetric") < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 8; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "K_symmetric") < 0)) __PYX_ERR(0, 8, __pyx_L3_error) } } else if (PyTuple_GET_SIZE(__pyx_args) != 2) { goto __pyx_L5_argtuple_error; @@ -1282,15 +1825,15 @@ static PyObject *__pyx_pw_3GPy_4kern_4_src_20coregionalize_cython_1K_symmetric(P } goto __pyx_L4_argument_unpacking_done; __pyx_L5_argtuple_error:; - __Pyx_RaiseArgtupleInvalid("K_symmetric", 1, 2, 2, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 8; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("K_symmetric", 1, 2, 2, PyTuple_GET_SIZE(__pyx_args)); __PYX_ERR(0, 8, __pyx_L3_error) __pyx_L3_error:; - __Pyx_AddTraceback("GPy.kern._src.coregionalize_cython.K_symmetric", __pyx_clineno, __pyx_lineno, __pyx_filename); + __Pyx_AddTraceback("GPy.kern.src.coregionalize_cython.K_symmetric", __pyx_clineno, __pyx_lineno, __pyx_filename); 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__pyx_t_12+=1) { + __pyx_v_m = __pyx_t_12; - /* "GPy/kern/_src/coregionalize_cython.pyx":14 + /* "GPy/kern/src/coregionalize_cython.pyx":14 * for n in range(N): * for m in range(N): * K[n, m] = B[X[n], X[m]] # <<<<<<<<<<<<<< * return K * */ - __pyx_t_11 = __pyx_v_n; - __pyx_t_12 = __pyx_v_m; - __pyx_t_13 = (*__Pyx_BufPtrStrided1d(__pyx_t_5numpy_int64_t *, __pyx_pybuffernd_X.rcbuffer->pybuffer.buf, __pyx_t_11, __pyx_pybuffernd_X.diminfo[0].strides)); - __pyx_t_14 = (*__Pyx_BufPtrStrided1d(__pyx_t_5numpy_int64_t *, __pyx_pybuffernd_X.rcbuffer->pybuffer.buf, __pyx_t_12, __pyx_pybuffernd_X.diminfo[0].strides)); - __pyx_t_15 = __pyx_v_n; - __pyx_t_16 = __pyx_v_m; - *__Pyx_BufPtrCContig2d(__pyx_t_5numpy_double_t *, __pyx_pybuffernd_K.rcbuffer->pybuffer.buf, __pyx_t_15, __pyx_pybuffernd_K.diminfo[0].strides, __pyx_t_16, __pyx_pybuffernd_K.diminfo[1].strides) = (*__Pyx_BufPtrStrided2d(double *, __pyx_pybuffernd_B.rcbuffer->pybuffer.buf, __pyx_t_13, __pyx_pybuffernd_B.diminfo[0].strides, __pyx_t_14, __pyx_pybuffernd_B.diminfo[1].strides)); 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Py_BLOCK_THREADS #endif goto __pyx_L5; @@ -1506,7 +2042,7 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_20coregionalize_cython_K_symmetric(CY } } - /* "GPy/kern/_src/coregionalize_cython.pyx":15 + /* "GPy/kern/src/coregionalize_cython.pyx":15 * for m in range(N): * K[n, m] = B[X[n], X[m]] * return K # <<<<<<<<<<<<<< @@ -1518,7 +2054,7 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_20coregionalize_cython_K_symmetric(CY __pyx_r = ((PyObject *)__pyx_v_K); goto __pyx_L0; - /* "GPy/kern/_src/coregionalize_cython.pyx":8 + /* "GPy/kern/src/coregionalize_cython.pyx":8 * cimport numpy as np * * def K_symmetric(np.ndarray[double, ndim=2] B, np.ndarray[np.int64_t, ndim=1] X): # <<<<<<<<<<<<<< @@ -1534,12 +2070,14 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_20coregionalize_cython_K_symmetric(CY __Pyx_XDECREF(__pyx_t_5); __Pyx_XDECREF(__pyx_t_6); { PyObject *__pyx_type, *__pyx_value, *__pyx_tb; + __Pyx_PyThreadState_declare + __Pyx_PyThreadState_assign __Pyx_ErrFetch(&__pyx_type, &__pyx_value, &__pyx_tb); __Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_B.rcbuffer->pybuffer); __Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_K.rcbuffer->pybuffer); __Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_X.rcbuffer->pybuffer); __Pyx_ErrRestore(__pyx_type, __pyx_value, __pyx_tb);} - __Pyx_AddTraceback("GPy.kern._src.coregionalize_cython.K_symmetric", __pyx_clineno, __pyx_lineno, __pyx_filename); + __Pyx_AddTraceback("GPy.kern.src.coregionalize_cython.K_symmetric", __pyx_clineno, __pyx_lineno, __pyx_filename); __pyx_r = NULL; goto __pyx_L2; __pyx_L0:; @@ -1553,7 +2091,7 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_20coregionalize_cython_K_symmetric(CY return __pyx_r; } -/* "GPy/kern/_src/coregionalize_cython.pyx":17 +/* "GPy/kern/src/coregionalize_cython.pyx":17 * return K * * def K_asymmetric(np.ndarray[double, ndim=2] B, np.ndarray[np.int64_t, ndim=1] X, np.ndarray[np.int64_t, ndim=1] X2): # <<<<<<<<<<<<<< @@ -1562,15 +2100,12 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_20coregionalize_cython_K_symmetric(CY */ /* Python wrapper */ -static PyObject *__pyx_pw_3GPy_4kern_4_src_20coregionalize_cython_3K_asymmetric(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds); /*proto*/ -static PyMethodDef __pyx_mdef_3GPy_4kern_4_src_20coregionalize_cython_3K_asymmetric = {"K_asymmetric", (PyCFunction)__pyx_pw_3GPy_4kern_4_src_20coregionalize_cython_3K_asymmetric, METH_VARARGS|METH_KEYWORDS, 0}; -static PyObject *__pyx_pw_3GPy_4kern_4_src_20coregionalize_cython_3K_asymmetric(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds) { +static PyObject *__pyx_pw_3GPy_4kern_3src_20coregionalize_cython_3K_asymmetric(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds); /*proto*/ +static PyMethodDef __pyx_mdef_3GPy_4kern_3src_20coregionalize_cython_3K_asymmetric = {"K_asymmetric", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_4kern_3src_20coregionalize_cython_3K_asymmetric, METH_VARARGS|METH_KEYWORDS, 0}; +static PyObject *__pyx_pw_3GPy_4kern_3src_20coregionalize_cython_3K_asymmetric(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds) { PyArrayObject *__pyx_v_B = 0; PyArrayObject *__pyx_v_X = 0; PyArrayObject *__pyx_v_X2 = 0; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; PyObject *__pyx_r = 0; __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("K_asymmetric (wrapper)", 0); @@ -1582,29 +2117,34 @@ static PyObject *__pyx_pw_3GPy_4kern_4_src_20coregionalize_cython_3K_asymmetric( const Py_ssize_t pos_args = PyTuple_GET_SIZE(__pyx_args); switch (pos_args) { case 3: values[2] = PyTuple_GET_ITEM(__pyx_args, 2); + CYTHON_FALLTHROUGH; case 2: values[1] = PyTuple_GET_ITEM(__pyx_args, 1); + CYTHON_FALLTHROUGH; case 1: values[0] = PyTuple_GET_ITEM(__pyx_args, 0); + CYTHON_FALLTHROUGH; case 0: break; default: goto __pyx_L5_argtuple_error; } kw_args = PyDict_Size(__pyx_kwds); switch (pos_args) { case 0: - if (likely((values[0] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_B)) != 0)) kw_args--; + if (likely((values[0] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_B)) != 0)) kw_args--; else goto __pyx_L5_argtuple_error; + CYTHON_FALLTHROUGH; case 1: - if (likely((values[1] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_X)) != 0)) kw_args--; + if (likely((values[1] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_X)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("K_asymmetric", 1, 3, 3, 1); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 17; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("K_asymmetric", 1, 3, 3, 1); __PYX_ERR(0, 17, __pyx_L3_error) } + CYTHON_FALLTHROUGH; case 2: - if (likely((values[2] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_X2)) != 0)) kw_args--; + if (likely((values[2] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_X2)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("K_asymmetric", 1, 3, 3, 2); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 17; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("K_asymmetric", 1, 3, 3, 2); __PYX_ERR(0, 17, __pyx_L3_error) } } if (unlikely(kw_args > 0)) { - if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "K_asymmetric") < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 17; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "K_asymmetric") < 0)) __PYX_ERR(0, 17, __pyx_L3_error) } } else if (PyTuple_GET_SIZE(__pyx_args) != 3) { goto __pyx_L5_argtuple_error; @@ -1619,16 +2159,16 @@ static PyObject *__pyx_pw_3GPy_4kern_4_src_20coregionalize_cython_3K_asymmetric( } goto __pyx_L4_argument_unpacking_done; __pyx_L5_argtuple_error:; - __Pyx_RaiseArgtupleInvalid("K_asymmetric", 1, 3, 3, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 17; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("K_asymmetric", 1, 3, 3, PyTuple_GET_SIZE(__pyx_args)); __PYX_ERR(0, 17, __pyx_L3_error) __pyx_L3_error:; - __Pyx_AddTraceback("GPy.kern._src.coregionalize_cython.K_asymmetric", __pyx_clineno, __pyx_lineno, __pyx_filename); + __Pyx_AddTraceback("GPy.kern.src.coregionalize_cython.K_asymmetric", __pyx_clineno, __pyx_lineno, __pyx_filename); 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/* function exit code */ goto __pyx_L0; @@ -1639,7 +2179,7 @@ static PyObject *__pyx_pw_3GPy_4kern_4_src_20coregionalize_cython_3K_asymmetric( return __pyx_r; } -static PyObject *__pyx_pf_3GPy_4kern_4_src_20coregionalize_cython_2K_asymmetric(CYTHON_UNUSED PyObject *__pyx_self, PyArrayObject *__pyx_v_B, PyArrayObject *__pyx_v_X, PyArrayObject *__pyx_v_X2) { +static PyObject *__pyx_pf_3GPy_4kern_3src_20coregionalize_cython_2K_asymmetric(CYTHON_UNUSED PyObject *__pyx_self, PyArrayObject *__pyx_v_B, PyArrayObject *__pyx_v_X, PyArrayObject *__pyx_v_X2) { int __pyx_v_N; int __pyx_v_M; PyArrayObject *__pyx_v_K = 0; @@ -1665,15 +2205,14 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_20coregionalize_cython_2K_asymmetric( int __pyx_t_8; int __pyx_t_9; int __pyx_t_10; - Py_ssize_t __pyx_t_11; - Py_ssize_t __pyx_t_12; - __pyx_t_5numpy_int64_t __pyx_t_13; - __pyx_t_5numpy_int64_t __pyx_t_14; - Py_ssize_t __pyx_t_15; - Py_ssize_t __pyx_t_16; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; + int __pyx_t_11; + int __pyx_t_12; + Py_ssize_t __pyx_t_13; + Py_ssize_t __pyx_t_14; + __pyx_t_5numpy_int64_t __pyx_t_15; + __pyx_t_5numpy_int64_t __pyx_t_16; + Py_ssize_t __pyx_t_17; + Py_ssize_t __pyx_t_18; __Pyx_RefNannySetupContext("K_asymmetric", 0); __pyx_pybuffer_K.pybuffer.buf = NULL; __pyx_pybuffer_K.refcount = 0; @@ -1693,63 +2232,63 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_20coregionalize_cython_2K_asymmetric( __pyx_pybuffernd_X2.rcbuffer = &__pyx_pybuffer_X2; { __Pyx_BufFmt_StackElem __pyx_stack[1]; - if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_B.rcbuffer->pybuffer, (PyObject*)__pyx_v_B, &__Pyx_TypeInfo_double, PyBUF_FORMAT| PyBUF_STRIDES, 2, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 17; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_B.rcbuffer->pybuffer, (PyObject*)__pyx_v_B, &__Pyx_TypeInfo_double, PyBUF_FORMAT| PyBUF_STRIDES, 2, 0, __pyx_stack) == -1)) __PYX_ERR(0, 17, __pyx_L1_error) } __pyx_pybuffernd_B.diminfo[0].strides = __pyx_pybuffernd_B.rcbuffer->pybuffer.strides[0]; 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Py_BLOCK_THREADS #endif goto __pyx_L5; @@ -1869,7 +2402,7 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_20coregionalize_cython_2K_asymmetric( } } - /* "GPy/kern/_src/coregionalize_cython.pyx":25 + /* "GPy/kern/src/coregionalize_cython.pyx":25 * for m in range(M): * K[n, m] = B[X[n], X2[m]] * return K # <<<<<<<<<<<<<< @@ -1881,7 +2414,7 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_20coregionalize_cython_2K_asymmetric( __pyx_r = ((PyObject *)__pyx_v_K); goto __pyx_L0; - /* "GPy/kern/_src/coregionalize_cython.pyx":17 + /* "GPy/kern/src/coregionalize_cython.pyx":17 * return K * * def K_asymmetric(np.ndarray[double, ndim=2] B, np.ndarray[np.int64_t, ndim=1] X, np.ndarray[np.int64_t, ndim=1] X2): # <<<<<<<<<<<<<< @@ -1897,13 +2430,15 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_20coregionalize_cython_2K_asymmetric( __Pyx_XDECREF(__pyx_t_5); __Pyx_XDECREF(__pyx_t_6); { PyObject *__pyx_type, *__pyx_value, *__pyx_tb; + __Pyx_PyThreadState_declare + __Pyx_PyThreadState_assign __Pyx_ErrFetch(&__pyx_type, &__pyx_value, &__pyx_tb); 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PyArrayObject *__pyx_v_index2 = 0; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; PyObject *__pyx_r = 0; __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("gradient_reduce (wrapper)", 0); @@ -1948,35 +2480,42 @@ static PyObject *__pyx_pw_3GPy_4kern_4_src_20coregionalize_cython_5gradient_redu const Py_ssize_t pos_args = PyTuple_GET_SIZE(__pyx_args); switch (pos_args) { case 4: values[3] = PyTuple_GET_ITEM(__pyx_args, 3); + CYTHON_FALLTHROUGH; case 3: values[2] = PyTuple_GET_ITEM(__pyx_args, 2); + CYTHON_FALLTHROUGH; case 2: values[1] = PyTuple_GET_ITEM(__pyx_args, 1); + CYTHON_FALLTHROUGH; case 1: values[0] = PyTuple_GET_ITEM(__pyx_args, 0); + CYTHON_FALLTHROUGH; case 0: break; default: goto __pyx_L5_argtuple_error; } kw_args = PyDict_Size(__pyx_kwds); switch (pos_args) { case 0: - if (likely((values[0] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_D)) != 0)) kw_args--; + if (likely((values[0] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_D)) != 0)) kw_args--; else goto __pyx_L5_argtuple_error; + CYTHON_FALLTHROUGH; case 1: - if (likely((values[1] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_dL_dK)) != 0)) kw_args--; + if (likely((values[1] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_dL_dK)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("gradient_reduce", 1, 4, 4, 1); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 27; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("gradient_reduce", 1, 4, 4, 1); __PYX_ERR(0, 27, __pyx_L3_error) } + CYTHON_FALLTHROUGH; case 2: - if (likely((values[2] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_index)) != 0)) kw_args--; + if (likely((values[2] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_index)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("gradient_reduce", 1, 4, 4, 2); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 27; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("gradient_reduce", 1, 4, 4, 2); __PYX_ERR(0, 27, __pyx_L3_error) } + CYTHON_FALLTHROUGH; case 3: - if (likely((values[3] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_index2)) != 0)) kw_args--; + if (likely((values[3] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_index2)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("gradient_reduce", 1, 4, 4, 3); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 27; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("gradient_reduce", 1, 4, 4, 3); __PYX_ERR(0, 27, __pyx_L3_error) } } if (unlikely(kw_args > 0)) { - if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "gradient_reduce") < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 27; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "gradient_reduce") < 0)) __PYX_ERR(0, 27, __pyx_L3_error) } } else if (PyTuple_GET_SIZE(__pyx_args) != 4) { goto __pyx_L5_argtuple_error; @@ -1986,23 +2525,23 @@ static PyObject *__pyx_pw_3GPy_4kern_4_src_20coregionalize_cython_5gradient_redu values[2] = PyTuple_GET_ITEM(__pyx_args, 2); values[3] = PyTuple_GET_ITEM(__pyx_args, 3); } - __pyx_v_D = __Pyx_PyInt_As_int(values[0]); if (unlikely((__pyx_v_D == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 27; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_D = __Pyx_PyInt_As_int(values[0]); if (unlikely((__pyx_v_D == (int)-1) && PyErr_Occurred())) __PYX_ERR(0, 27, __pyx_L3_error) __pyx_v_dL_dK = ((PyArrayObject *)values[1]); __pyx_v_index = ((PyArrayObject *)values[2]); __pyx_v_index2 = ((PyArrayObject *)values[3]); } goto __pyx_L4_argument_unpacking_done; __pyx_L5_argtuple_error:; - __Pyx_RaiseArgtupleInvalid("gradient_reduce", 1, 4, 4, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 27; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("gradient_reduce", 1, 4, 4, PyTuple_GET_SIZE(__pyx_args)); __PYX_ERR(0, 27, __pyx_L3_error) __pyx_L3_error:; - __Pyx_AddTraceback("GPy.kern._src.coregionalize_cython.gradient_reduce", __pyx_clineno, __pyx_lineno, __pyx_filename); 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/* function exit code */ goto __pyx_L0; @@ -2013,7 +2552,7 @@ static PyObject *__pyx_pw_3GPy_4kern_4_src_20coregionalize_cython_5gradient_redu return __pyx_r; } -static PyObject *__pyx_pf_3GPy_4kern_4_src_20coregionalize_cython_4gradient_reduce(CYTHON_UNUSED PyObject *__pyx_self, int __pyx_v_D, PyArrayObject *__pyx_v_dL_dK, PyArrayObject *__pyx_v_index, PyArrayObject *__pyx_v_index2) { +static PyObject *__pyx_pf_3GPy_4kern_3src_20coregionalize_cython_4gradient_reduce(CYTHON_UNUSED PyObject *__pyx_self, int __pyx_v_D, PyArrayObject *__pyx_v_dL_dK, PyArrayObject *__pyx_v_index, PyArrayObject *__pyx_v_index2) { PyArrayObject *__pyx_v_dL_dK_small = 0; int __pyx_v_N; int __pyx_v_M; @@ -2039,15 +2578,14 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_20coregionalize_cython_4gradient_redu int __pyx_t_8; int __pyx_t_9; int __pyx_t_10; - Py_ssize_t __pyx_t_11; - Py_ssize_t __pyx_t_12; + int __pyx_t_11; + int __pyx_t_12; Py_ssize_t __pyx_t_13; Py_ssize_t __pyx_t_14; - __pyx_t_5numpy_int64_t __pyx_t_15; 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- /* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":233 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":287 * for i in range(ndim): * info.strides[i] = PyArray_STRIDES(self)[i] * info.shape[i] = PyArray_DIMS(self)[i] # <<<<<<<<<<<<<< @@ -2611,17 +3091,17 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P (__pyx_v_info->shape[__pyx_v_i]) = (PyArray_DIMS(__pyx_v_self)[__pyx_v_i]); } - /* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":226 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":280 * info.buf = PyArray_DATA(self) * info.ndim = ndim - * if copy_shape: # <<<<<<<<<<<<<< + * if sizeof(npy_intp) != sizeof(Py_ssize_t): # <<<<<<<<<<<<<< * # Allocate new buffer for strides and shape info. * # This is allocated as one block, strides first. */ - goto __pyx_L11; + goto __pyx_L9; } - /* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":235 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":289 * info.shape[i] = PyArray_DIMS(self)[i] * else: * info.strides = PyArray_STRIDES(self) # <<<<<<<<<<<<<< @@ -2631,7 +3111,7 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P /*else*/ { __pyx_v_info->strides = ((Py_ssize_t *)PyArray_STRIDES(__pyx_v_self)); - /* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":236 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":290 * else: * info.strides = PyArray_STRIDES(self) * info.shape = PyArray_DIMS(self) # <<<<<<<<<<<<<< @@ -2640,9 +3120,9 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ __pyx_v_info->shape = ((Py_ssize_t *)PyArray_DIMS(__pyx_v_self)); } - __pyx_L11:; + __pyx_L9:; - /* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":237 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":291 * info.strides = PyArray_STRIDES(self) * info.shape = PyArray_DIMS(self) * info.suboffsets = NULL # <<<<<<<<<<<<<< @@ -2651,7 +3131,7 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ __pyx_v_info->suboffsets = NULL; - /* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":238 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":292 * info.shape = PyArray_DIMS(self) * info.suboffsets = NULL * info.itemsize = PyArray_ITEMSIZE(self) # <<<<<<<<<<<<<< @@ -2660,7 +3140,7 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ __pyx_v_info->itemsize = PyArray_ITEMSIZE(__pyx_v_self); - /* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":239 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":293 * info.suboffsets = NULL * info.itemsize = PyArray_ITEMSIZE(self) * info.readonly = not PyArray_ISWRITEABLE(self) # <<<<<<<<<<<<<< @@ -2669,106 +3149,54 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ __pyx_v_info->readonly = (!(PyArray_ISWRITEABLE(__pyx_v_self) != 0)); - /* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":242 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":296 * * cdef int t * cdef char* f = NULL # <<<<<<<<<<<<<< - * cdef dtype descr = self.descr + * cdef dtype descr = PyArray_DESCR(self) * cdef int offset */ __pyx_v_f = NULL; - /* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":243 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":297 * cdef int t * cdef char* f = NULL - * cdef dtype descr = self.descr # <<<<<<<<<<<<<< + * cdef dtype descr = PyArray_DESCR(self) # <<<<<<<<<<<<<< * cdef int offset * */ - __pyx_t_3 = ((PyObject *)__pyx_v_self->descr); + __pyx_t_7 = PyArray_DESCR(__pyx_v_self); + __pyx_t_3 = ((PyObject *)__pyx_t_7); __Pyx_INCREF(__pyx_t_3); __pyx_v_descr = ((PyArray_Descr *)__pyx_t_3); __pyx_t_3 = 0; - /* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":246 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":300 * cdef int offset * - * cdef bint hasfields = PyDataType_HASFIELDS(descr) # <<<<<<<<<<<<<< + * info.obj = self # <<<<<<<<<<<<<< * - * if not hasfields and not copy_shape: + * if not PyDataType_HASFIELDS(descr): */ - __pyx_v_hasfields = PyDataType_HASFIELDS(__pyx_v_descr); + __Pyx_INCREF(((PyObject *)__pyx_v_self)); + __Pyx_GIVEREF(((PyObject *)__pyx_v_self)); + __Pyx_GOTREF(__pyx_v_info->obj); + __Pyx_DECREF(__pyx_v_info->obj); + __pyx_v_info->obj = ((PyObject *)__pyx_v_self); - /* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":248 - * cdef bint hasfields = PyDataType_HASFIELDS(descr) + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":302 + * info.obj = self * - * if not hasfields and not copy_shape: # <<<<<<<<<<<<<< - * # do not call releasebuffer - * info.obj = None - */ - __pyx_t_2 = ((!(__pyx_v_hasfields != 0)) != 0); - if (__pyx_t_2) { - } else { - __pyx_t_1 = __pyx_t_2; - goto __pyx_L15_bool_binop_done; - } - __pyx_t_2 = ((!(__pyx_v_copy_shape != 0)) != 0); - __pyx_t_1 = __pyx_t_2; - __pyx_L15_bool_binop_done:; - if (__pyx_t_1) { - - /* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":250 - * if not hasfields and not copy_shape: - * # do not call releasebuffer - * info.obj = None # <<<<<<<<<<<<<< - * else: - * # need to call releasebuffer - */ - __Pyx_INCREF(Py_None); - __Pyx_GIVEREF(Py_None); - __Pyx_GOTREF(__pyx_v_info->obj); - __Pyx_DECREF(__pyx_v_info->obj); - __pyx_v_info->obj = Py_None; - - /* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":248 - * cdef bint hasfields = PyDataType_HASFIELDS(descr) - * - * if not hasfields and not copy_shape: # <<<<<<<<<<<<<< - * # do not call releasebuffer - * info.obj = None - */ - goto __pyx_L14; - } - - /* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":253 - * else: - * # need to call releasebuffer - * info.obj = self # <<<<<<<<<<<<<< - * - * if not hasfields: - */ - /*else*/ { - __Pyx_INCREF(((PyObject *)__pyx_v_self)); - __Pyx_GIVEREF(((PyObject *)__pyx_v_self)); - __Pyx_GOTREF(__pyx_v_info->obj); - __Pyx_DECREF(__pyx_v_info->obj); - __pyx_v_info->obj = ((PyObject *)__pyx_v_self); - } - __pyx_L14:; - - /* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":255 - * info.obj = self - * - * if not hasfields: # <<<<<<<<<<<<<< + * if not PyDataType_HASFIELDS(descr): # <<<<<<<<<<<<<< * t = descr.type_num * if ((descr.byteorder == c'>' and little_endian) or */ - __pyx_t_1 = ((!(__pyx_v_hasfields != 0)) != 0); + __pyx_t_1 = ((!(PyDataType_HASFIELDS(__pyx_v_descr) != 0)) != 0); if (__pyx_t_1) { - /* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":256 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":303 * - * if not hasfields: + * if not PyDataType_HASFIELDS(descr): * t = descr.type_num # <<<<<<<<<<<<<< * if ((descr.byteorder == c'>' and little_endian) or * (descr.byteorder == c'<' and not little_endian)): @@ -2776,8 +3204,8 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P __pyx_t_4 = __pyx_v_descr->type_num; __pyx_v_t = __pyx_t_4; - /* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":257 - * if not hasfields: + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":304 + * if not PyDataType_HASFIELDS(descr): * t = descr.type_num * if ((descr.byteorder == c'>' and little_endian) or # <<<<<<<<<<<<<< * (descr.byteorder == c'<' and not little_endian)): @@ -2785,18 +3213,18 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ __pyx_t_2 = ((__pyx_v_descr->byteorder == '>') != 0); if (!__pyx_t_2) { - goto __pyx_L20_next_or; + goto __pyx_L15_next_or; } else { } __pyx_t_2 = (__pyx_v_little_endian != 0); if (!__pyx_t_2) { } else { __pyx_t_1 = __pyx_t_2; - goto __pyx_L19_bool_binop_done; + goto __pyx_L14_bool_binop_done; } - __pyx_L20_next_or:; + __pyx_L15_next_or:; - /* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":258 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":305 * t = descr.type_num * if ((descr.byteorder == c'>' and little_endian) or * (descr.byteorder == c'<' and not little_endian)): # <<<<<<<<<<<<<< @@ -2807,36 +3235,36 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P if (__pyx_t_2) { } else { __pyx_t_1 = __pyx_t_2; - goto __pyx_L19_bool_binop_done; + goto __pyx_L14_bool_binop_done; } __pyx_t_2 = ((!(__pyx_v_little_endian != 0)) != 0); __pyx_t_1 = __pyx_t_2; - __pyx_L19_bool_binop_done:; + __pyx_L14_bool_binop_done:; - /* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":257 - * if not hasfields: + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":304 + * if not PyDataType_HASFIELDS(descr): * t = descr.type_num * if ((descr.byteorder == c'>' and little_endian) or # <<<<<<<<<<<<<< * (descr.byteorder == c'<' and not little_endian)): * raise ValueError(u"Non-native byte order not supported") */ - if (__pyx_t_1) { + if (unlikely(__pyx_t_1)) { - /* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":259 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":306 * if ((descr.byteorder == c'>' and little_endian) or * (descr.byteorder == c'<' and not little_endian)): * raise ValueError(u"Non-native byte order not supported") # <<<<<<<<<<<<<< * if t == NPY_BYTE: f = "b" * elif t == NPY_UBYTE: f = "B" */ - __pyx_t_3 = __Pyx_PyObject_Call(__pyx_builtin_ValueError, __pyx_tuple__3, NULL); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 259; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = __Pyx_PyObject_Call(__pyx_builtin_ValueError, __pyx_tuple__3, NULL); if (unlikely(!__pyx_t_3)) __PYX_ERR(1, 306, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_3); __Pyx_Raise(__pyx_t_3, 0, 0, 0); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - {__pyx_filename = __pyx_f[1]; __pyx_lineno = 259; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __PYX_ERR(1, 306, __pyx_L1_error) - /* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":257 - * if not hasfields: + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":304 + * if not PyDataType_HASFIELDS(descr): * t = descr.type_num * if ((descr.byteorder == c'>' and little_endian) or # <<<<<<<<<<<<<< * (descr.byteorder == c'<' and not little_endian)): @@ -2844,7 +3272,7 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ } - /* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":260 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":307 * (descr.byteorder == c'<' and not little_endian)): * raise ValueError(u"Non-native byte order not supported") * if t == NPY_BYTE: f = "b" # <<<<<<<<<<<<<< @@ -2853,213 +3281,208 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ switch (__pyx_v_t) { case NPY_BYTE: - __pyx_v_f = __pyx_k_b; + __pyx_v_f = ((char *)"b"); break; + case NPY_UBYTE: - /* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":261 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":308 * raise ValueError(u"Non-native byte order not supported") * if t == NPY_BYTE: f = "b" * elif t == NPY_UBYTE: f = "B" # <<<<<<<<<<<<<< * elif t == NPY_SHORT: f = "h" * elif t == NPY_USHORT: f = "H" */ - case NPY_UBYTE: - __pyx_v_f = __pyx_k_B; + __pyx_v_f = ((char *)"B"); break; + case NPY_SHORT: - /* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":262 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":309 * if t == NPY_BYTE: f = "b" * elif t == NPY_UBYTE: f = "B" * elif t == NPY_SHORT: f = "h" # <<<<<<<<<<<<<< * elif t == NPY_USHORT: f = "H" * elif t == NPY_INT: f = "i" */ - case NPY_SHORT: - __pyx_v_f = __pyx_k_h; + __pyx_v_f = ((char *)"h"); break; + case NPY_USHORT: - /* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":263 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":310 * elif t == NPY_UBYTE: f = "B" * elif t == NPY_SHORT: f = "h" * elif t == NPY_USHORT: f = "H" # <<<<<<<<<<<<<< * elif t == NPY_INT: f = "i" * elif t == NPY_UINT: f = "I" */ - case NPY_USHORT: - __pyx_v_f = __pyx_k_H; + __pyx_v_f = ((char *)"H"); break; + case NPY_INT: - /* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":264 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":311 * elif t == NPY_SHORT: f = "h" * elif t == NPY_USHORT: f = "H" * elif t == NPY_INT: f = "i" # <<<<<<<<<<<<<< * elif t == NPY_UINT: f = "I" * elif t == NPY_LONG: f = "l" */ - case NPY_INT: - __pyx_v_f = __pyx_k_i; + __pyx_v_f = ((char *)"i"); break; + case NPY_UINT: - /* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":265 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":312 * elif t == NPY_USHORT: f = "H" * elif t == NPY_INT: f = "i" * elif t == NPY_UINT: f = "I" # <<<<<<<<<<<<<< * elif t == NPY_LONG: f = "l" * elif t == NPY_ULONG: f = "L" */ - case NPY_UINT: - __pyx_v_f = __pyx_k_I; + __pyx_v_f = ((char *)"I"); break; + case NPY_LONG: - /* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":266 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":313 * elif t == NPY_INT: f = "i" * elif t == NPY_UINT: f = "I" * elif t == NPY_LONG: f = "l" # <<<<<<<<<<<<<< * elif t == NPY_ULONG: f = "L" * elif t == NPY_LONGLONG: f = "q" */ - case NPY_LONG: - __pyx_v_f = __pyx_k_l; + __pyx_v_f = ((char *)"l"); break; + case NPY_ULONG: - /* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":267 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":314 * elif t == NPY_UINT: f = "I" * elif t == NPY_LONG: f = "l" * elif t == NPY_ULONG: f = "L" # <<<<<<<<<<<<<< * elif t == NPY_LONGLONG: f = "q" * elif t == NPY_ULONGLONG: f = "Q" */ - case NPY_ULONG: - __pyx_v_f = __pyx_k_L; + __pyx_v_f = ((char *)"L"); break; + case NPY_LONGLONG: - /* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":268 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":315 * elif t == NPY_LONG: f = "l" * elif t == NPY_ULONG: f = "L" * elif t == NPY_LONGLONG: f = "q" # <<<<<<<<<<<<<< * elif t == NPY_ULONGLONG: f = "Q" * elif t == NPY_FLOAT: f = "f" */ - case NPY_LONGLONG: - __pyx_v_f = __pyx_k_q; + __pyx_v_f = ((char *)"q"); break; + case NPY_ULONGLONG: - /* "../../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":269 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":316 * elif t == NPY_ULONG: f = "L" * elif t == NPY_LONGLONG: f = "q" * elif t == NPY_ULONGLONG: f = "Q" # <<<<<<<<<<<<<< * elif t == NPY_FLOAT: f = "f" * elif t == NPY_DOUBLE: f = "d" */ - case NPY_ULONGLONG: - __pyx_v_f = __pyx_k_Q; + __pyx_v_f = ((char *)"Q"); 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+ (void)__Pyx_modinit_variable_export_code(); + (void)__Pyx_modinit_function_export_code(); + (void)__Pyx_modinit_type_init_code(); + if (unlikely(__Pyx_modinit_type_import_code() != 0)) goto __pyx_L1_error; + (void)__Pyx_modinit_variable_import_code(); + (void)__Pyx_modinit_function_import_code(); /*--- Execution code ---*/ #if defined(__Pyx_Generator_USED) || defined(__Pyx_Coroutine_USED) - if (__Pyx_patch_abc() < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (__Pyx_patch_abc() < 0) __PYX_ERR(0, 1, __pyx_L1_error) #endif - /* "GPy/kern/_src/coregionalize_cython.pyx":5 + /* "GPy/kern/src/coregionalize_cython.pyx":5 * #cython: nonecheck=False * import cython * import numpy as np # <<<<<<<<<<<<<< * cimport numpy as np * */ - __pyx_t_1 = __Pyx_Import(__pyx_n_s_numpy, 0, -1); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 5; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_Import(__pyx_n_s_numpy, 0, -1); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 5, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_1); - if (PyDict_SetItem(__pyx_d, __pyx_n_s_np, __pyx_t_1) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 5; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyDict_SetItem(__pyx_d, __pyx_n_s_np, __pyx_t_1) < 0) __PYX_ERR(0, 5, __pyx_L1_error) __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "GPy/kern/_src/coregionalize_cython.pyx":8 + /* "GPy/kern/src/coregionalize_cython.pyx":8 * cimport numpy as np * * def K_symmetric(np.ndarray[double, ndim=2] B, np.ndarray[np.int64_t, ndim=1] X): # <<<<<<<<<<<<<< * cdef int N = X.size * cdef np.ndarray[np.double_t, ndim=2, mode='c'] K = np.empty((N, N)) */ - __pyx_t_1 = PyCFunction_NewEx(&__pyx_mdef_3GPy_4kern_4_src_20coregionalize_cython_1K_symmetric, NULL, __pyx_n_s_GPy_kern__src_coregionalize_cyth); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 8; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyCFunction_NewEx(&__pyx_mdef_3GPy_4kern_3src_20coregionalize_cython_1K_symmetric, NULL, __pyx_n_s_GPy_kern_src_coregionalize_cytho_2); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 8, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_1); - if (PyDict_SetItem(__pyx_d, __pyx_n_s_K_symmetric, __pyx_t_1) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 8; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyDict_SetItem(__pyx_d, __pyx_n_s_K_symmetric, __pyx_t_1) < 0) __PYX_ERR(0, 8, __pyx_L1_error) __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "GPy/kern/_src/coregionalize_cython.pyx":17 + /* "GPy/kern/src/coregionalize_cython.pyx":17 * return K * * def K_asymmetric(np.ndarray[double, ndim=2] B, np.ndarray[np.int64_t, ndim=1] X, np.ndarray[np.int64_t, ndim=1] X2): # <<<<<<<<<<<<<< * cdef int N = X.size * cdef int M = X2.size */ - __pyx_t_1 = PyCFunction_NewEx(&__pyx_mdef_3GPy_4kern_4_src_20coregionalize_cython_3K_asymmetric, NULL, __pyx_n_s_GPy_kern__src_coregionalize_cyth); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 17; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyCFunction_NewEx(&__pyx_mdef_3GPy_4kern_3src_20coregionalize_cython_3K_asymmetric, NULL, __pyx_n_s_GPy_kern_src_coregionalize_cytho_2); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 17, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_1); - if (PyDict_SetItem(__pyx_d, __pyx_n_s_K_asymmetric, __pyx_t_1) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 17; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyDict_SetItem(__pyx_d, __pyx_n_s_K_asymmetric, __pyx_t_1) < 0) __PYX_ERR(0, 17, __pyx_L1_error) __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "GPy/kern/_src/coregionalize_cython.pyx":27 + /* "GPy/kern/src/coregionalize_cython.pyx":27 * return K * * def gradient_reduce(int D, np.ndarray[double, ndim=2] dL_dK, np.ndarray[np.int64_t, ndim=1] index, np.ndarray[np.int64_t, ndim=1] index2): # <<<<<<<<<<<<<< * cdef np.ndarray[np.double_t, ndim=2, mode='c'] dL_dK_small = np.zeros((D, D)) * cdef int N = index.size */ - __pyx_t_1 = PyCFunction_NewEx(&__pyx_mdef_3GPy_4kern_4_src_20coregionalize_cython_5gradient_reduce, NULL, __pyx_n_s_GPy_kern__src_coregionalize_cyth); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 27; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyCFunction_NewEx(&__pyx_mdef_3GPy_4kern_3src_20coregionalize_cython_5gradient_reduce, NULL, __pyx_n_s_GPy_kern_src_coregionalize_cytho_2); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 27, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_1); - if (PyDict_SetItem(__pyx_d, __pyx_n_s_gradient_reduce, __pyx_t_1) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 27; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyDict_SetItem(__pyx_d, __pyx_n_s_gradient_reduce, __pyx_t_1) < 0) __PYX_ERR(0, 27, __pyx_L1_error) __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "GPy/kern/_src/coregionalize_cython.pyx":1 + /* "GPy/kern/src/coregionalize_cython.pyx":1 * #cython: boundscheck=False # <<<<<<<<<<<<<< * #cython: wraparound=False * #cython: nonecheck=False */ - __pyx_t_1 = PyDict_New(); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_PyDict_NewPresized(0); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 1, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_1); 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r = PyLong_AsVoidPtr(p); end: @@ -4836,6 +5873,21 @@ end: } #endif +/* PyObjectGetAttrStr */ +#if CYTHON_USE_TYPE_SLOTS +static CYTHON_INLINE PyObject* __Pyx_PyObject_GetAttrStr(PyObject* obj, PyObject* attr_name) { + PyTypeObject* tp = Py_TYPE(obj); + if (likely(tp->tp_getattro)) + return tp->tp_getattro(obj, attr_name); +#if PY_MAJOR_VERSION < 3 + if (likely(tp->tp_getattr)) + return tp->tp_getattr(obj, PyString_AS_STRING(attr_name)); +#endif + return PyObject_GetAttr(obj, attr_name); +} +#endif + +/* GetBuiltinName */ static PyObject *__Pyx_GetBuiltinName(PyObject *name) { PyObject* result = __Pyx_PyObject_GetAttrStr(__pyx_b, name); if (unlikely(!result)) { @@ -4849,6 +5901,7 @@ static PyObject *__Pyx_GetBuiltinName(PyObject *name) { return result; } +/* RaiseArgTupleInvalid */ static void __Pyx_RaiseArgtupleInvalid( const char* func_name, int exact, @@ -4874,6 +5927,7 @@ static void __Pyx_RaiseArgtupleInvalid( (num_expected == 1) ? "" : "s", num_found); } +/* RaiseDoubleKeywords */ static void __Pyx_RaiseDoubleKeywordsError( const char* func_name, PyObject* kw_name) @@ -4887,6 +5941,7 @@ static void __Pyx_RaiseDoubleKeywordsError( #endif } +/* ParseKeywords */ static int __Pyx_ParseOptionalKeywords( PyObject *kwds, PyObject **argnames[], @@ -4988,36 +6043,39 @@ bad: return -1; } -static void __Pyx_RaiseArgumentTypeInvalid(const char* name, PyObject *obj, PyTypeObject *type) { - PyErr_Format(PyExc_TypeError, - "Argument '%.200s' has incorrect type (expected %.200s, got %.200s)", - name, type->tp_name, Py_TYPE(obj)->tp_name); -} -static CYTHON_INLINE int __Pyx_ArgTypeTest(PyObject *obj, PyTypeObject *type, int none_allowed, - const char *name, int exact) +/* ArgTypeTest */ +static int __Pyx__ArgTypeTest(PyObject *obj, PyTypeObject *type, const char *name, int exact) { if (unlikely(!type)) { PyErr_SetString(PyExc_SystemError, "Missing type object"); return 0; } - if (none_allowed && obj == Py_None) return 1; else if (exact) { - if (likely(Py_TYPE(obj) == type)) return 1; #if PY_MAJOR_VERSION == 2 - else if ((type == &PyBaseString_Type) && likely(__Pyx_PyBaseString_CheckExact(obj))) return 1; + if ((type == &PyBaseString_Type) && likely(__Pyx_PyBaseString_CheckExact(obj))) return 1; #endif } else { - if (likely(PyObject_TypeCheck(obj, type))) return 1; + if (likely(__Pyx_TypeCheck(obj, type))) return 1; } - __Pyx_RaiseArgumentTypeInvalid(name, obj, type); + PyErr_Format(PyExc_TypeError, + "Argument '%.200s' has incorrect type (expected %.200s, got %.200s)", + name, type->tp_name, Py_TYPE(obj)->tp_name); return 0; } -static CYTHON_INLINE int __Pyx_IsLittleEndian(void) { - unsigned int n = 1; - return *(unsigned char*)(&n) != 0; +/* IsLittleEndian */ +static CYTHON_INLINE int __Pyx_Is_Little_Endian(void) +{ + union { + uint32_t u32; + uint8_t u8[4]; + } S; + S.u32 = 0x01020304; + return S.u8[0] == 4; } + +/* BufferFormatCheck */ static void __Pyx_BufFmt_Init(__Pyx_BufFmt_Context* ctx, __Pyx_BufFmt_StackElem* stack, __Pyx_TypeInfo* type) { @@ -5339,7 +6397,7 @@ static int __Pyx_BufFmt_ProcessTypeChunk(__Pyx_BufFmt_Context* ctx) { ctx->is_complex = 0; return 0; } -static CYTHON_INLINE PyObject * +static PyObject * __pyx_buffmt_parse_array(__Pyx_BufFmt_Context* ctx, const char** tsp) { const char *ts = *tsp; @@ -5404,7 +6462,7 @@ static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const cha ++ts; break; case '<': - if (!__Pyx_IsLittleEndian()) { + if (!__Pyx_Is_Little_Endian()) { PyErr_SetString(PyExc_ValueError, "Little-endian buffer not supported on big-endian compiler"); return NULL; } @@ -5413,7 +6471,7 @@ static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const cha break; case '>': case '!': - if (__Pyx_IsLittleEndian()) { + if (__Pyx_Is_Little_Endian()) { PyErr_SetString(PyExc_ValueError, "Big-endian buffer not supported on little-endian compiler"); return NULL; } @@ -5477,6 +6535,7 @@ static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const cha __Pyx_BufFmt_RaiseUnexpectedChar('Z'); return NULL; } + CYTHON_FALLTHROUGH; case 'c': case 'b': case 'B': case 'h': case 'H': case 'i': case 'I': case 'l': case 'L': case 'q': case 'Q': case 'f': case 'd': case 'g': @@ -5489,6 +6548,7 @@ static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const cha ++ts; break; } + CYTHON_FALLTHROUGH; case 's': if (__Pyx_BufFmt_ProcessTypeChunk(ctx) == -1) return NULL; ctx->enc_count = ctx->new_count; @@ -5516,24 +6576,30 @@ static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const cha } } } -static CYTHON_INLINE void __Pyx_ZeroBuffer(Py_buffer* buf) { + +/* BufferGetAndValidate */ + static CYTHON_INLINE void __Pyx_SafeReleaseBuffer(Py_buffer* info) { + if (unlikely(info->buf == NULL)) return; + if (info->suboffsets == __Pyx_minusones) info->suboffsets = NULL; + __Pyx_ReleaseBuffer(info); +} +static void __Pyx_ZeroBuffer(Py_buffer* buf) { buf->buf = NULL; buf->obj = NULL; buf->strides = __Pyx_zeros; buf->shape = __Pyx_zeros; buf->suboffsets = __Pyx_minusones; } -static CYTHON_INLINE int __Pyx_GetBufferAndValidate( +static int __Pyx__GetBufferAndValidate( Py_buffer* buf, PyObject* obj, __Pyx_TypeInfo* dtype, int flags, int nd, int cast, __Pyx_BufFmt_StackElem* stack) { - if (obj == Py_None || obj == NULL) { - __Pyx_ZeroBuffer(buf); - return 0; - } buf->buf = NULL; - if (__Pyx_GetBuffer(obj, buf, flags) == -1) goto fail; - if (buf->ndim != nd) { + if (unlikely(__Pyx_GetBuffer(obj, buf, flags) == -1)) { + __Pyx_ZeroBuffer(buf); + return -1; + } + if (unlikely(buf->ndim != nd)) { PyErr_Format(PyExc_ValueError, "Buffer has wrong number of dimensions (expected %d, got %d)", nd, buf->ndim); @@ -5544,7 +6610,7 @@ static CYTHON_INLINE int __Pyx_GetBufferAndValidate( __Pyx_BufFmt_Init(&ctx, stack, dtype); if (!__Pyx_BufFmt_CheckString(&ctx, buf->format)) goto fail; } - if ((unsigned)buf->itemsize != dtype->size) { + if (unlikely((unsigned)buf->itemsize != dtype->size)) { PyErr_Format(PyExc_ValueError, "Item size of buffer (%" CYTHON_FORMAT_SSIZE_T "d byte%s) does not match size of '%s' (%" CYTHON_FORMAT_SSIZE_T "d byte%s)", buf->itemsize, (buf->itemsize > 1) ? "s" : "", @@ -5554,33 +6620,189 @@ static CYTHON_INLINE int __Pyx_GetBufferAndValidate( if (buf->suboffsets == NULL) buf->suboffsets = __Pyx_minusones; return 0; fail:; - __Pyx_ZeroBuffer(buf); + __Pyx_SafeReleaseBuffer(buf); return -1; } -static CYTHON_INLINE void __Pyx_SafeReleaseBuffer(Py_buffer* info) { - if (info->buf == NULL) return; - if (info->suboffsets == __Pyx_minusones) info->suboffsets = NULL; - __Pyx_ReleaseBuffer(info); -} -static CYTHON_INLINE PyObject *__Pyx_GetModuleGlobalName(PyObject *name) { +/* GetModuleGlobalName */ + #if CYTHON_USE_DICT_VERSIONS +static PyObject *__Pyx__GetModuleGlobalName(PyObject *name, PY_UINT64_T *dict_version, PyObject **dict_cached_value) +#else +static CYTHON_INLINE PyObject *__Pyx__GetModuleGlobalName(PyObject *name) +#endif +{ PyObject *result; -#if CYTHON_COMPILING_IN_CPYTHON - result = PyDict_GetItem(__pyx_d, name); +#if !CYTHON_AVOID_BORROWED_REFS +#if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX >= 0x030500A1 + result = _PyDict_GetItem_KnownHash(__pyx_d, name, ((PyASCIIObject *) name)->hash); + __PYX_UPDATE_DICT_CACHE(__pyx_d, result, *dict_cached_value, *dict_version) if (likely(result)) { - Py_INCREF(result); - } else { + return __Pyx_NewRef(result); + } else if (unlikely(PyErr_Occurred())) { + return NULL; + } +#else + result = PyDict_GetItem(__pyx_d, name); + __PYX_UPDATE_DICT_CACHE(__pyx_d, result, *dict_cached_value, *dict_version) + if (likely(result)) { + return __Pyx_NewRef(result); + } +#endif #else result = PyObject_GetItem(__pyx_d, name); - if (!result) { - PyErr_Clear(); -#endif - result = __Pyx_GetBuiltinName(name); + __PYX_UPDATE_DICT_CACHE(__pyx_d, result, *dict_cached_value, *dict_version) + if (likely(result)) { + return __Pyx_NewRef(result); } - return result; + PyErr_Clear(); +#endif + return __Pyx_GetBuiltinName(name); } -#if CYTHON_COMPILING_IN_CPYTHON +/* PyCFunctionFastCall */ + #if CYTHON_FAST_PYCCALL +static CYTHON_INLINE PyObject * __Pyx_PyCFunction_FastCall(PyObject *func_obj, PyObject **args, Py_ssize_t nargs) { + PyCFunctionObject *func = (PyCFunctionObject*)func_obj; + PyCFunction meth = PyCFunction_GET_FUNCTION(func); + PyObject *self = PyCFunction_GET_SELF(func); + int flags = PyCFunction_GET_FLAGS(func); + assert(PyCFunction_Check(func)); + assert(METH_FASTCALL == (flags & ~(METH_CLASS | METH_STATIC | METH_COEXIST | METH_KEYWORDS | METH_STACKLESS))); + assert(nargs >= 0); + assert(nargs == 0 || args != NULL); + /* _PyCFunction_FastCallDict() must not be called with an exception set, + because it may clear it (directly or indirectly) and so the + caller loses its exception */ + assert(!PyErr_Occurred()); + if ((PY_VERSION_HEX < 0x030700A0) || unlikely(flags & METH_KEYWORDS)) { + return (*((__Pyx_PyCFunctionFastWithKeywords)(void*)meth)) (self, args, nargs, NULL); + } else { + return (*((__Pyx_PyCFunctionFast)(void*)meth)) (self, args, nargs); + } +} +#endif + +/* PyFunctionFastCall */ + #if CYTHON_FAST_PYCALL +static PyObject* __Pyx_PyFunction_FastCallNoKw(PyCodeObject *co, PyObject **args, Py_ssize_t na, + PyObject *globals) { + PyFrameObject *f; + PyThreadState *tstate = __Pyx_PyThreadState_Current; + PyObject **fastlocals; + Py_ssize_t i; + PyObject *result; + assert(globals != NULL); + /* XXX Perhaps we should create a specialized + PyFrame_New() that doesn't take locals, but does + take builtins without sanity checking them. + */ + assert(tstate != NULL); + f = PyFrame_New(tstate, co, globals, NULL); + if (f == NULL) { + return NULL; + } + fastlocals = __Pyx_PyFrame_GetLocalsplus(f); + for (i = 0; i < na; i++) { + Py_INCREF(*args); + fastlocals[i] = *args++; + } + result = PyEval_EvalFrameEx(f,0); + ++tstate->recursion_depth; + Py_DECREF(f); + --tstate->recursion_depth; + return result; +} +#if 1 || PY_VERSION_HEX < 0x030600B1 +static PyObject *__Pyx_PyFunction_FastCallDict(PyObject *func, PyObject **args, int nargs, PyObject *kwargs) { + PyCodeObject *co = (PyCodeObject *)PyFunction_GET_CODE(func); + PyObject *globals = PyFunction_GET_GLOBALS(func); + PyObject *argdefs = PyFunction_GET_DEFAULTS(func); + PyObject *closure; +#if PY_MAJOR_VERSION >= 3 + PyObject *kwdefs; +#endif + PyObject *kwtuple, **k; + PyObject **d; + Py_ssize_t nd; + Py_ssize_t nk; + PyObject *result; + assert(kwargs == NULL || PyDict_Check(kwargs)); + nk = kwargs ? PyDict_Size(kwargs) : 0; + if (Py_EnterRecursiveCall((char*)" while calling a Python object")) { + return NULL; + } + if ( +#if PY_MAJOR_VERSION >= 3 + co->co_kwonlyargcount == 0 && +#endif + likely(kwargs == NULL || nk == 0) && + co->co_flags == (CO_OPTIMIZED | CO_NEWLOCALS | CO_NOFREE)) { + if (argdefs == NULL && co->co_argcount == nargs) { + result = __Pyx_PyFunction_FastCallNoKw(co, args, nargs, globals); + goto done; + } + else if (nargs == 0 && argdefs != NULL + && co->co_argcount == Py_SIZE(argdefs)) { + /* function called with no arguments, but all parameters have + a default value: use default values as arguments .*/ + args = &PyTuple_GET_ITEM(argdefs, 0); + result =__Pyx_PyFunction_FastCallNoKw(co, args, Py_SIZE(argdefs), globals); + goto done; + } + } + if (kwargs != NULL) { + Py_ssize_t pos, i; + kwtuple = PyTuple_New(2 * nk); + if (kwtuple == NULL) { + result = NULL; + goto done; + } + k = &PyTuple_GET_ITEM(kwtuple, 0); + pos = i = 0; + while (PyDict_Next(kwargs, &pos, &k[i], &k[i+1])) { + Py_INCREF(k[i]); + Py_INCREF(k[i+1]); + i += 2; + } + nk = i / 2; + } + else { + kwtuple = NULL; + k = NULL; + } + closure = PyFunction_GET_CLOSURE(func); +#if PY_MAJOR_VERSION >= 3 + kwdefs = PyFunction_GET_KW_DEFAULTS(func); +#endif + if (argdefs != NULL) { + d = &PyTuple_GET_ITEM(argdefs, 0); + nd = Py_SIZE(argdefs); + } + else { + d = NULL; + nd = 0; + } +#if PY_MAJOR_VERSION >= 3 + result = PyEval_EvalCodeEx((PyObject*)co, globals, (PyObject *)NULL, + args, nargs, + k, (int)nk, + d, (int)nd, kwdefs, closure); +#else + result = PyEval_EvalCodeEx(co, globals, (PyObject *)NULL, + args, nargs, + k, (int)nk, + d, (int)nd, closure); +#endif + Py_XDECREF(kwtuple); +done: + Py_LeaveRecursiveCall(); + return result; +} +#endif +#endif + +/* PyObjectCall */ + #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyObject_Call(PyObject *func, PyObject *arg, PyObject *kw) { PyObject *result; ternaryfunc call = func->ob_type->tp_call; @@ -5599,7 +6821,37 @@ static CYTHON_INLINE PyObject* __Pyx_PyObject_Call(PyObject *func, PyObject *arg } #endif -#if CYTHON_COMPILING_IN_CPYTHON +/* PyObjectCall2Args */ + static CYTHON_UNUSED PyObject* __Pyx_PyObject_Call2Args(PyObject* function, PyObject* arg1, PyObject* arg2) { + PyObject *args, *result = NULL; + #if CYTHON_FAST_PYCALL + if (PyFunction_Check(function)) { + PyObject *args[2] = {arg1, arg2}; + return __Pyx_PyFunction_FastCall(function, args, 2); + } + #endif + #if CYTHON_FAST_PYCCALL + if (__Pyx_PyFastCFunction_Check(function)) { + PyObject *args[2] = {arg1, arg2}; + return __Pyx_PyCFunction_FastCall(function, args, 2); + } + #endif + args = PyTuple_New(2); + if (unlikely(!args)) goto done; + Py_INCREF(arg1); + PyTuple_SET_ITEM(args, 0, arg1); + Py_INCREF(arg2); + PyTuple_SET_ITEM(args, 1, arg2); + Py_INCREF(function); + result = __Pyx_PyObject_Call(function, args, NULL); + Py_DECREF(args); + Py_DECREF(function); +done: + return result; +} + +/* PyObjectCallMethO */ + #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyObject_CallMethO(PyObject *func, PyObject *arg) { PyObject *self, *result; PyCFunction cfunc; @@ -5618,7 +6870,8 @@ static CYTHON_INLINE PyObject* __Pyx_PyObject_CallMethO(PyObject *func, PyObject } #endif -#if CYTHON_COMPILING_IN_CPYTHON +/* PyObjectCallOneArg */ + #if CYTHON_COMPILING_IN_CPYTHON static PyObject* __Pyx__PyObject_CallOneArg(PyObject *func, PyObject *arg) { PyObject *result; PyObject *args = PyTuple_New(1); @@ -5630,40 +6883,50 @@ static PyObject* __Pyx__PyObject_CallOneArg(PyObject *func, PyObject *arg) { return result; } static CYTHON_INLINE PyObject* __Pyx_PyObject_CallOneArg(PyObject *func, PyObject *arg) { -#ifdef __Pyx_CyFunction_USED - if (likely(PyCFunction_Check(func) || PyObject_TypeCheck(func, __pyx_CyFunctionType))) { -#else - if (likely(PyCFunction_Check(func))) { +#if CYTHON_FAST_PYCALL + if (PyFunction_Check(func)) { + return __Pyx_PyFunction_FastCall(func, &arg, 1); + } #endif + if (likely(PyCFunction_Check(func))) { if (likely(PyCFunction_GET_FLAGS(func) & METH_O)) { return __Pyx_PyObject_CallMethO(func, arg); +#if CYTHON_FAST_PYCCALL + } else if (PyCFunction_GET_FLAGS(func) & METH_FASTCALL) { + return __Pyx_PyCFunction_FastCall(func, &arg, 1); +#endif } } return __Pyx__PyObject_CallOneArg(func, arg); } #else static CYTHON_INLINE PyObject* __Pyx_PyObject_CallOneArg(PyObject *func, PyObject *arg) { - PyObject* args = PyTuple_Pack(1, arg); - return (likely(args)) ? __Pyx_PyObject_Call(func, args, NULL) : NULL; + PyObject *result; + PyObject *args = PyTuple_Pack(1, arg); + if (unlikely(!args)) return NULL; + result = __Pyx_PyObject_Call(func, args, NULL); + Py_DECREF(args); + return result; } #endif -static CYTHON_INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type) { +/* ExtTypeTest */ + static CYTHON_INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type) { if (unlikely(!type)) { PyErr_SetString(PyExc_SystemError, "Missing type object"); return 0; } - if (likely(PyObject_TypeCheck(obj, type))) + if (likely(__Pyx_TypeCheck(obj, type))) return 1; PyErr_Format(PyExc_TypeError, "Cannot convert %.200s to %.200s", Py_TYPE(obj)->tp_name, type->tp_name); return 0; } -static CYTHON_INLINE void __Pyx_ErrRestore(PyObject *type, PyObject *value, PyObject *tb) { -#if CYTHON_COMPILING_IN_CPYTHON +/* PyErrFetchRestore */ + #if CYTHON_FAST_THREAD_STATE +static CYTHON_INLINE void __Pyx_ErrRestoreInState(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb) { PyObject *tmp_type, *tmp_value, *tmp_tb; - PyThreadState *tstate = PyThreadState_GET(); tmp_type = tstate->curexc_type; tmp_value = tstate->curexc_value; tmp_tb = tstate->curexc_traceback; @@ -5673,27 +6936,22 @@ static CYTHON_INLINE void __Pyx_ErrRestore(PyObject *type, PyObject *value, PyOb Py_XDECREF(tmp_type); Py_XDECREF(tmp_value); Py_XDECREF(tmp_tb); -#else - PyErr_Restore(type, value, tb); -#endif } -static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb) { -#if CYTHON_COMPILING_IN_CPYTHON - PyThreadState *tstate = PyThreadState_GET(); +static CYTHON_INLINE void __Pyx_ErrFetchInState(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb) { *type = tstate->curexc_type; *value = tstate->curexc_value; *tb = tstate->curexc_traceback; tstate->curexc_type = 0; tstate->curexc_value = 0; tstate->curexc_traceback = 0; -#else - PyErr_Fetch(type, value, tb); -#endif } +#endif -#if PY_MAJOR_VERSION < 3 +/* RaiseException */ + #if PY_MAJOR_VERSION < 3 static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, CYTHON_UNUSED PyObject *cause) { + __Pyx_PyThreadState_declare Py_XINCREF(type); if (!value || value == Py_None) value = NULL; @@ -5732,6 +6990,7 @@ static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, goto raise_error; } } + __Pyx_PyThreadState_assign __Pyx_ErrRestore(type, value, tb); return; raise_error: @@ -5804,11 +7063,7 @@ static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject "raise: exception class must be a subclass of BaseException"); goto bad; } -#if PY_VERSION_HEX >= 0x03030000 if (cause) { -#else - if (cause && cause != Py_None) { -#endif PyObject *fixed_cause; if (cause == Py_None) { fixed_cause = NULL; @@ -5836,7 +7091,7 @@ static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject PyErr_Restore(tmp_type, tmp_value, tb); Py_XDECREF(tmp_tb); #else - PyThreadState *tstate = PyThreadState_GET(); + PyThreadState *tstate = __Pyx_PyThreadState_Current; PyObject* tmp_tb = tstate->curexc_traceback; if (tb != tmp_tb) { Py_INCREF(tb); @@ -5851,28 +7106,272 @@ bad: } #endif -static CYTHON_INLINE void __Pyx_RaiseTooManyValuesError(Py_ssize_t expected) { +/* DictGetItem */ + #if PY_MAJOR_VERSION >= 3 && !CYTHON_COMPILING_IN_PYPY +static PyObject *__Pyx_PyDict_GetItem(PyObject *d, PyObject* key) { + PyObject *value; + value = PyDict_GetItemWithError(d, key); + if (unlikely(!value)) { + if (!PyErr_Occurred()) { + if (unlikely(PyTuple_Check(key))) { + PyObject* args = PyTuple_Pack(1, key); + if (likely(args)) { + PyErr_SetObject(PyExc_KeyError, args); + Py_DECREF(args); + } + } else { + PyErr_SetObject(PyExc_KeyError, key); + } + } + return NULL; + } + Py_INCREF(value); + return value; +} +#endif + +/* RaiseTooManyValuesToUnpack */ + static CYTHON_INLINE void __Pyx_RaiseTooManyValuesError(Py_ssize_t expected) { PyErr_Format(PyExc_ValueError, "too many values to unpack (expected %" CYTHON_FORMAT_SSIZE_T "d)", expected); } -static CYTHON_INLINE void __Pyx_RaiseNeedMoreValuesError(Py_ssize_t index) { +/* RaiseNeedMoreValuesToUnpack */ + static CYTHON_INLINE void __Pyx_RaiseNeedMoreValuesError(Py_ssize_t index) { PyErr_Format(PyExc_ValueError, "need more than %" CYTHON_FORMAT_SSIZE_T "d value%.1s to unpack", index, (index == 1) ? "" : "s"); } -static CYTHON_INLINE void __Pyx_RaiseNoneNotIterableError(void) { +/* RaiseNoneIterError */ + static CYTHON_INLINE void __Pyx_RaiseNoneNotIterableError(void) { PyErr_SetString(PyExc_TypeError, "'NoneType' object is not iterable"); } -static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level) { +/* GetTopmostException */ + #if CYTHON_USE_EXC_INFO_STACK +static _PyErr_StackItem * +__Pyx_PyErr_GetTopmostException(PyThreadState *tstate) +{ + _PyErr_StackItem *exc_info = tstate->exc_info; + while ((exc_info->exc_type == NULL || exc_info->exc_type == Py_None) && + exc_info->previous_item != NULL) + { + exc_info = exc_info->previous_item; + } + return exc_info; +} +#endif + +/* SaveResetException */ + #if CYTHON_FAST_THREAD_STATE +static CYTHON_INLINE void __Pyx__ExceptionSave(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb) { + #if CYTHON_USE_EXC_INFO_STACK + _PyErr_StackItem *exc_info = __Pyx_PyErr_GetTopmostException(tstate); + *type = exc_info->exc_type; + *value = exc_info->exc_value; + *tb = exc_info->exc_traceback; + #else + *type = tstate->exc_type; + *value = tstate->exc_value; + *tb = tstate->exc_traceback; + #endif + Py_XINCREF(*type); + Py_XINCREF(*value); + Py_XINCREF(*tb); +} +static CYTHON_INLINE void __Pyx__ExceptionReset(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb) { + PyObject *tmp_type, *tmp_value, *tmp_tb; + #if CYTHON_USE_EXC_INFO_STACK + _PyErr_StackItem *exc_info = tstate->exc_info; + tmp_type = exc_info->exc_type; + tmp_value = exc_info->exc_value; + tmp_tb = exc_info->exc_traceback; + exc_info->exc_type = type; + exc_info->exc_value = value; + exc_info->exc_traceback = tb; + #else + tmp_type = tstate->exc_type; + tmp_value = tstate->exc_value; + tmp_tb = tstate->exc_traceback; + tstate->exc_type = type; + tstate->exc_value = value; + tstate->exc_traceback = tb; + #endif + Py_XDECREF(tmp_type); + Py_XDECREF(tmp_value); + Py_XDECREF(tmp_tb); +} +#endif + +/* PyErrExceptionMatches */ + #if CYTHON_FAST_THREAD_STATE +static int __Pyx_PyErr_ExceptionMatchesTuple(PyObject *exc_type, PyObject *tuple) { + Py_ssize_t i, n; + n = PyTuple_GET_SIZE(tuple); +#if PY_MAJOR_VERSION >= 3 + for (i=0; icurexc_type; + if (exc_type == err) return 1; + if (unlikely(!exc_type)) return 0; + if (unlikely(PyTuple_Check(err))) + return __Pyx_PyErr_ExceptionMatchesTuple(exc_type, err); + return __Pyx_PyErr_GivenExceptionMatches(exc_type, err); +} +#endif + +/* GetException */ + #if CYTHON_FAST_THREAD_STATE +static int __Pyx__GetException(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb) +#else +static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb) +#endif +{ + PyObject *local_type, *local_value, *local_tb; +#if CYTHON_FAST_THREAD_STATE + PyObject *tmp_type, *tmp_value, *tmp_tb; + local_type = tstate->curexc_type; + local_value = tstate->curexc_value; + local_tb = tstate->curexc_traceback; + tstate->curexc_type = 0; + tstate->curexc_value = 0; + tstate->curexc_traceback = 0; +#else + PyErr_Fetch(&local_type, &local_value, &local_tb); +#endif + PyErr_NormalizeException(&local_type, &local_value, &local_tb); +#if CYTHON_FAST_THREAD_STATE + if (unlikely(tstate->curexc_type)) +#else + if (unlikely(PyErr_Occurred())) +#endif + goto bad; + #if PY_MAJOR_VERSION >= 3 + if (local_tb) { + if (unlikely(PyException_SetTraceback(local_value, local_tb) < 0)) + goto bad; + } + #endif + Py_XINCREF(local_tb); + Py_XINCREF(local_type); + Py_XINCREF(local_value); + *type = local_type; + *value = local_value; + *tb = local_tb; +#if CYTHON_FAST_THREAD_STATE + #if CYTHON_USE_EXC_INFO_STACK + { + _PyErr_StackItem *exc_info = tstate->exc_info; + tmp_type = exc_info->exc_type; + tmp_value = exc_info->exc_value; + tmp_tb = exc_info->exc_traceback; + exc_info->exc_type = local_type; + exc_info->exc_value = local_value; + exc_info->exc_traceback = local_tb; + } + #else + tmp_type = tstate->exc_type; + tmp_value = tstate->exc_value; + tmp_tb = tstate->exc_traceback; + tstate->exc_type = local_type; + tstate->exc_value = local_value; + tstate->exc_traceback = local_tb; + #endif + Py_XDECREF(tmp_type); + Py_XDECREF(tmp_value); + Py_XDECREF(tmp_tb); +#else + PyErr_SetExcInfo(local_type, local_value, local_tb); +#endif + return 0; +bad: + *type = 0; + *value = 0; + *tb = 0; + Py_XDECREF(local_type); + Py_XDECREF(local_value); + Py_XDECREF(local_tb); + return -1; +} + +/* TypeImport */ + #ifndef __PYX_HAVE_RT_ImportType +#define __PYX_HAVE_RT_ImportType +static PyTypeObject *__Pyx_ImportType(PyObject *module, const char *module_name, const char *class_name, + size_t size, enum __Pyx_ImportType_CheckSize check_size) +{ + PyObject *result = 0; + char warning[200]; + Py_ssize_t basicsize; +#ifdef Py_LIMITED_API + PyObject *py_basicsize; +#endif + result = PyObject_GetAttrString(module, class_name); + if (!result) + goto bad; + if (!PyType_Check(result)) { + PyErr_Format(PyExc_TypeError, + "%.200s.%.200s is not a type object", + module_name, class_name); + goto bad; + } +#ifndef Py_LIMITED_API + basicsize = ((PyTypeObject *)result)->tp_basicsize; +#else + py_basicsize = PyObject_GetAttrString(result, "__basicsize__"); + if (!py_basicsize) + goto bad; + basicsize = PyLong_AsSsize_t(py_basicsize); + Py_DECREF(py_basicsize); + py_basicsize = 0; + if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred()) + goto bad; +#endif + if ((size_t)basicsize < size) { + PyErr_Format(PyExc_ValueError, + "%.200s.%.200s size changed, may indicate binary incompatibility. " + "Expected %zd from C header, got %zd from PyObject", + module_name, class_name, size, basicsize); + goto bad; + } + if (check_size == __Pyx_ImportType_CheckSize_Error && (size_t)basicsize != size) { + PyErr_Format(PyExc_ValueError, + "%.200s.%.200s size changed, may indicate binary incompatibility. " + "Expected %zd from C header, got %zd from PyObject", + module_name, class_name, size, basicsize); + goto bad; + } + else if (check_size == __Pyx_ImportType_CheckSize_Warn && (size_t)basicsize > size) { + PyOS_snprintf(warning, sizeof(warning), + "%s.%s size changed, may indicate binary incompatibility. " + "Expected %zd from C header, got %zd from PyObject", + module_name, class_name, size, basicsize); + if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad; + } + return (PyTypeObject *)result; +bad: + Py_XDECREF(result); + return NULL; +} +#endif + +/* Import */ + static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level) { PyObject *empty_list = 0; PyObject *module = 0; PyObject *global_dict = 0; PyObject *empty_dict = 0; PyObject *list; - #if PY_VERSION_HEX < 0x03030000 + #if PY_MAJOR_VERSION < 3 PyObject *py_import; py_import = __Pyx_PyObject_GetAttrStr(__pyx_b, __pyx_n_s_import); if (!py_import) @@ -5896,17 +7395,8 @@ static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level) { #if PY_MAJOR_VERSION >= 3 if (level == -1) { if (strchr(__Pyx_MODULE_NAME, '.')) { - #if PY_VERSION_HEX < 0x03030000 - PyObject *py_level = PyInt_FromLong(1); - if (!py_level) - goto bad; - module = PyObject_CallFunctionObjArgs(py_import, - name, global_dict, empty_dict, list, py_level, NULL); - Py_DECREF(py_level); - #else module = PyImport_ImportModuleLevelObject( name, global_dict, empty_dict, list, 1); - #endif if (!module) { if (!PyErr_ExceptionMatches(PyExc_ImportError)) goto bad; @@ -5917,12 +7407,12 @@ static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level) { } #endif if (!module) { - #if PY_VERSION_HEX < 0x03030000 + #if PY_MAJOR_VERSION < 3 PyObject *py_level = PyInt_FromLong(level); if (!py_level) goto bad; module = PyObject_CallFunctionObjArgs(py_import, - name, global_dict, empty_dict, list, py_level, NULL); + name, global_dict, empty_dict, list, py_level, (PyObject *)NULL); Py_DECREF(py_level); #else module = PyImport_ImportModuleLevelObject( @@ -5931,7 +7421,7 @@ static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level) { } } bad: - #if PY_VERSION_HEX < 0x03030000 + #if PY_MAJOR_VERSION < 3 Py_XDECREF(py_import); #endif Py_XDECREF(empty_list); @@ -5939,7 +7429,50 @@ bad: return module; } -static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) { +/* CLineInTraceback */ + #ifndef CYTHON_CLINE_IN_TRACEBACK +static int __Pyx_CLineForTraceback(PyThreadState *tstate, int c_line) { + PyObject *use_cline; + PyObject *ptype, *pvalue, *ptraceback; +#if CYTHON_COMPILING_IN_CPYTHON + PyObject **cython_runtime_dict; +#endif + if (unlikely(!__pyx_cython_runtime)) { + return c_line; + } + __Pyx_ErrFetchInState(tstate, &ptype, &pvalue, &ptraceback); +#if CYTHON_COMPILING_IN_CPYTHON + cython_runtime_dict = _PyObject_GetDictPtr(__pyx_cython_runtime); + if (likely(cython_runtime_dict)) { + __PYX_PY_DICT_LOOKUP_IF_MODIFIED( + use_cline, *cython_runtime_dict, + __Pyx_PyDict_GetItemStr(*cython_runtime_dict, __pyx_n_s_cline_in_traceback)) + } else +#endif + { + PyObject *use_cline_obj = __Pyx_PyObject_GetAttrStr(__pyx_cython_runtime, __pyx_n_s_cline_in_traceback); + if (use_cline_obj) { + use_cline = PyObject_Not(use_cline_obj) ? Py_False : Py_True; + Py_DECREF(use_cline_obj); + } else { + PyErr_Clear(); + use_cline = NULL; + } + } + if (!use_cline) { + c_line = 0; + PyObject_SetAttr(__pyx_cython_runtime, __pyx_n_s_cline_in_traceback, Py_False); + } + else if (use_cline == Py_False || (use_cline != Py_True && PyObject_Not(use_cline) != 0)) { + c_line = 0; + } + __Pyx_ErrRestoreInState(tstate, ptype, pvalue, ptraceback); + return c_line; +} +#endif + +/* CodeObjectCache */ + static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) { int start = 0, mid = 0, end = count - 1; if (end >= 0 && code_line > entries[end].code_line) { return count; @@ -6018,7 +7551,8 @@ static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) { Py_INCREF(code_object); } -#include "compile.h" +/* AddTraceback */ + #include "compile.h" #include "frameobject.h" #include "traceback.h" static PyCodeObject* __Pyx_CreateCodeObjectForTraceback( @@ -6077,21 +7611,25 @@ static void __Pyx_AddTraceback(const char *funcname, int c_line, int py_line, const char *filename) { PyCodeObject *py_code = 0; PyFrameObject *py_frame = 0; - py_code = __pyx_find_code_object(c_line ? c_line : py_line); + PyThreadState *tstate = __Pyx_PyThreadState_Current; + if (c_line) { + c_line = __Pyx_CLineForTraceback(tstate, c_line); + } + py_code = __pyx_find_code_object(c_line ? -c_line : py_line); if (!py_code) { py_code = __Pyx_CreateCodeObjectForTraceback( funcname, c_line, py_line, filename); if (!py_code) goto bad; - __pyx_insert_code_object(c_line ? c_line : py_line, py_code); + __pyx_insert_code_object(c_line ? -c_line : py_line, py_code); } py_frame = PyFrame_New( - PyThreadState_GET(), /*PyThreadState *tstate,*/ - py_code, /*PyCodeObject *code,*/ - __pyx_d, /*PyObject *globals,*/ - 0 /*PyObject *locals*/ + tstate, /*PyThreadState *tstate,*/ + py_code, /*PyCodeObject *code,*/ + __pyx_d, /*PyObject *globals,*/ + 0 /*PyObject *locals*/ ); if (!py_frame) goto bad; - py_frame->f_lineno = py_line; + __Pyx_PyFrame_SetLineNumber(py_frame, py_line); PyTraceBack_Here(py_frame); bad: Py_XDECREF(py_code); @@ -6101,7 +7639,7 @@ bad: #if PY_MAJOR_VERSION < 3 static int __Pyx_GetBuffer(PyObject *obj, Py_buffer *view, int flags) { if (PyObject_CheckBuffer(obj)) return PyObject_GetBuffer(obj, view, flags); - if (PyObject_TypeCheck(obj, __pyx_ptype_5numpy_ndarray)) return __pyx_pw_5numpy_7ndarray_1__getbuffer__(obj, view, flags); + if (__Pyx_TypeCheck(obj, __pyx_ptype_5numpy_ndarray)) return __pyx_pw_5numpy_7ndarray_1__getbuffer__(obj, view, flags); PyErr_Format(PyExc_TypeError, "'%.200s' does not have the buffer interface", Py_TYPE(obj)->tp_name); return -1; } @@ -6112,14 +7650,16 @@ static void __Pyx_ReleaseBuffer(Py_buffer *view) { PyBuffer_Release(view); return; } - if (PyObject_TypeCheck(obj, __pyx_ptype_5numpy_ndarray)) { __pyx_pw_5numpy_7ndarray_3__releasebuffer__(obj, view); return; } - Py_DECREF(obj); + if ((0)) {} + else if (__Pyx_TypeCheck(obj, __pyx_ptype_5numpy_ndarray)) __pyx_pw_5numpy_7ndarray_3__releasebuffer__(obj, view); view->obj = NULL; + Py_DECREF(obj); } #endif - #define __PYX_VERIFY_RETURN_INT(target_type, func_type, func_value)\ + /* CIntFromPyVerify */ + #define __PYX_VERIFY_RETURN_INT(target_type, func_type, func_value)\ __PYX__VERIFY_RETURN_INT(target_type, func_type, func_value, 0) #define __PYX_VERIFY_RETURN_INT_EXC(target_type, func_type, func_value)\ __PYX__VERIFY_RETURN_INT(target_type, func_type, func_value, 1) @@ -6140,12 +7680,381 @@ static void __Pyx_ReleaseBuffer(Py_buffer *view) { return (target_type) value;\ } -#if CYTHON_USE_PYLONG_INTERNALS - #include "longintrepr.h" +/* CIntToPy */ + static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value) { + const int neg_one = (int) ((int) 0 - (int) 1), const_zero = (int) 0; + const int is_unsigned = neg_one > const_zero; + if (is_unsigned) { + if (sizeof(int) < sizeof(long)) { + return PyInt_FromLong((long) value); + } else if (sizeof(int) <= sizeof(unsigned long)) { + return PyLong_FromUnsignedLong((unsigned long) value); +#ifdef HAVE_LONG_LONG + } else if (sizeof(int) <= sizeof(unsigned PY_LONG_LONG)) { + return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); +#endif + } + } else { + if (sizeof(int) <= sizeof(long)) { + return PyInt_FromLong((long) value); +#ifdef HAVE_LONG_LONG + } else if (sizeof(int) <= sizeof(PY_LONG_LONG)) { + return PyLong_FromLongLong((PY_LONG_LONG) value); +#endif + } + } + { + int one = 1; int little = (int)*(unsigned char *)&one; + unsigned char *bytes = (unsigned char *)&value; + return _PyLong_FromByteArray(bytes, sizeof(int), + little, !is_unsigned); + } +} + +/* Declarations */ + #if CYTHON_CCOMPLEX + #ifdef __cplusplus + static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) { + return ::std::complex< float >(x, y); + } + #else + static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) { + return x + y*(__pyx_t_float_complex)_Complex_I; + } + #endif +#else + static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) { + __pyx_t_float_complex z; + z.real = x; + z.imag = y; + return z; + } #endif -static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { - const int neg_one = (int) -1, const_zero = (int) 0; +/* Arithmetic */ + #if CYTHON_CCOMPLEX +#else + static CYTHON_INLINE int __Pyx_c_eq_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { + return (a.real == b.real) && (a.imag == b.imag); + } + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sum_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { + __pyx_t_float_complex z; + z.real = a.real + b.real; + z.imag = a.imag + b.imag; + return z; + } + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_diff_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { + __pyx_t_float_complex z; + z.real = a.real - b.real; + z.imag = a.imag - b.imag; + return z; + } + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_prod_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { + __pyx_t_float_complex z; + z.real = a.real * b.real - a.imag * b.imag; + z.imag = a.real * b.imag + a.imag * b.real; + return z; + } + #if 1 + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quot_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { + if (b.imag == 0) { + return __pyx_t_float_complex_from_parts(a.real / b.real, a.imag / b.real); + } else if (fabsf(b.real) >= fabsf(b.imag)) { + if (b.real == 0 && b.imag == 0) { + return __pyx_t_float_complex_from_parts(a.real / b.real, a.imag / b.imag); + } else { + float r = b.imag / b.real; + float s = 1.0 / (b.real + b.imag * r); + return __pyx_t_float_complex_from_parts( + (a.real + a.imag * r) * s, (a.imag - a.real * r) * s); + } + } else { + float r = b.real / b.imag; + float s = 1.0 / (b.imag + b.real * r); + return __pyx_t_float_complex_from_parts( + (a.real * r + a.imag) * s, (a.imag * r - a.real) * s); + } + } + #else + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quot_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { + if (b.imag == 0) { + return __pyx_t_float_complex_from_parts(a.real / b.real, a.imag / b.real); + } else { + float denom = b.real * b.real + b.imag * b.imag; + return __pyx_t_float_complex_from_parts( + (a.real * b.real + a.imag * b.imag) / denom, + (a.imag * b.real - a.real * b.imag) / denom); + } + } + #endif + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_neg_float(__pyx_t_float_complex a) { + __pyx_t_float_complex z; + z.real = -a.real; + z.imag = -a.imag; + return z; + } + static CYTHON_INLINE int __Pyx_c_is_zero_float(__pyx_t_float_complex a) { + return (a.real == 0) && (a.imag == 0); + } + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conj_float(__pyx_t_float_complex a) { + __pyx_t_float_complex z; + z.real = a.real; + z.imag = -a.imag; + return z; + } + #if 1 + static CYTHON_INLINE float __Pyx_c_abs_float(__pyx_t_float_complex z) { + #if !defined(HAVE_HYPOT) || defined(_MSC_VER) + return sqrtf(z.real*z.real + z.imag*z.imag); + #else + return hypotf(z.real, z.imag); + #endif + } + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_pow_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { + __pyx_t_float_complex z; + float r, lnr, theta, z_r, z_theta; + if (b.imag == 0 && b.real == (int)b.real) { + if (b.real < 0) { + float denom = a.real * a.real + a.imag * a.imag; + a.real = a.real / denom; + a.imag = -a.imag / denom; + b.real = -b.real; + } + switch ((int)b.real) { + case 0: + z.real = 1; + z.imag = 0; + return z; + case 1: + return a; + case 2: + z = __Pyx_c_prod_float(a, a); + return __Pyx_c_prod_float(a, a); + case 3: + z = __Pyx_c_prod_float(a, a); + return __Pyx_c_prod_float(z, a); + case 4: + z = __Pyx_c_prod_float(a, a); + return __Pyx_c_prod_float(z, z); + } + } + if (a.imag == 0) { + if (a.real == 0) { + return a; + } else if (b.imag == 0) { + z.real = powf(a.real, b.real); + z.imag = 0; + return z; + } else if (a.real > 0) { + r = a.real; + theta = 0; + } else { + r = -a.real; + theta = atan2f(0, -1); + } + } else { + r = __Pyx_c_abs_float(a); + theta = atan2f(a.imag, a.real); + } + lnr = logf(r); + z_r = expf(lnr * b.real - theta * b.imag); + z_theta = theta * b.real + lnr * b.imag; + z.real = z_r * cosf(z_theta); + z.imag = z_r * sinf(z_theta); + return z; + } + #endif +#endif + +/* Declarations */ + #if CYTHON_CCOMPLEX + #ifdef __cplusplus + static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) { + return ::std::complex< double >(x, y); + } + #else + static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) { + return x + y*(__pyx_t_double_complex)_Complex_I; + } + #endif +#else + static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) { + __pyx_t_double_complex z; + z.real = x; + z.imag = y; + return z; + } +#endif + +/* Arithmetic */ + #if CYTHON_CCOMPLEX +#else + static CYTHON_INLINE int __Pyx_c_eq_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { + return (a.real == b.real) && (a.imag == b.imag); + } + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { + __pyx_t_double_complex z; + z.real = a.real + b.real; + z.imag = a.imag + b.imag; + return z; + } + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { + __pyx_t_double_complex z; + z.real = a.real - b.real; + z.imag = a.imag - b.imag; + return z; + } + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_prod_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { + __pyx_t_double_complex z; + z.real = a.real * b.real - a.imag * b.imag; + z.imag = a.real * b.imag + a.imag * b.real; + return z; + } + #if 1 + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { + if (b.imag == 0) { + return __pyx_t_double_complex_from_parts(a.real / b.real, a.imag / b.real); + } else if (fabs(b.real) >= fabs(b.imag)) { + if (b.real == 0 && b.imag == 0) { + return __pyx_t_double_complex_from_parts(a.real / b.real, a.imag / b.imag); + } else { + double r = b.imag / b.real; + double s = 1.0 / (b.real + b.imag * r); + return __pyx_t_double_complex_from_parts( + (a.real + a.imag * r) * s, (a.imag - a.real * r) * s); + } + } else { + double r = b.real / b.imag; + double s = 1.0 / (b.imag + b.real * r); + return __pyx_t_double_complex_from_parts( + (a.real * r + a.imag) * s, (a.imag * r - a.real) * s); + } + } + #else + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { + if (b.imag == 0) { + return __pyx_t_double_complex_from_parts(a.real / b.real, a.imag / b.real); + } else { + double denom = b.real * b.real + b.imag * b.imag; + return __pyx_t_double_complex_from_parts( + (a.real * b.real + a.imag * b.imag) / denom, + (a.imag * b.real - a.real * b.imag) / denom); + } + } + #endif + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg_double(__pyx_t_double_complex a) { + __pyx_t_double_complex z; + z.real = -a.real; + z.imag = -a.imag; + return z; + } + static CYTHON_INLINE int __Pyx_c_is_zero_double(__pyx_t_double_complex a) { + return (a.real == 0) && (a.imag == 0); + } + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj_double(__pyx_t_double_complex a) { + __pyx_t_double_complex z; + z.real = a.real; + z.imag = -a.imag; + return z; + } + #if 1 + static CYTHON_INLINE double __Pyx_c_abs_double(__pyx_t_double_complex z) { + #if !defined(HAVE_HYPOT) || defined(_MSC_VER) + return sqrt(z.real*z.real + z.imag*z.imag); + #else + return hypot(z.real, z.imag); + #endif + } + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { + __pyx_t_double_complex z; + double r, lnr, theta, z_r, z_theta; + if (b.imag == 0 && b.real == (int)b.real) { + if (b.real < 0) { + double denom = a.real * a.real + a.imag * a.imag; + a.real = a.real / denom; + a.imag = -a.imag / denom; + b.real = -b.real; + } + switch ((int)b.real) { + case 0: + z.real = 1; + z.imag = 0; + return z; + case 1: + return a; + case 2: + z = __Pyx_c_prod_double(a, a); + return __Pyx_c_prod_double(a, a); + case 3: + z = __Pyx_c_prod_double(a, a); + return __Pyx_c_prod_double(z, a); + case 4: + z = __Pyx_c_prod_double(a, a); + return __Pyx_c_prod_double(z, z); + } + } + if (a.imag == 0) { + if (a.real == 0) { + return a; + } else if (b.imag == 0) { + z.real = pow(a.real, b.real); + z.imag = 0; + return z; + } else if (a.real > 0) { + r = a.real; + theta = 0; + } else { + r = -a.real; + theta = atan2(0, -1); + } + } else { + r = __Pyx_c_abs_double(a); + theta = atan2(a.imag, a.real); + } + lnr = log(r); + z_r = exp(lnr * b.real - theta * b.imag); + z_theta = theta * b.real + lnr * b.imag; + z.real = z_r * cos(z_theta); + z.imag = z_r * sin(z_theta); + return z; + } + #endif +#endif + +/* CIntToPy */ + static CYTHON_INLINE PyObject* __Pyx_PyInt_From_enum__NPY_TYPES(enum NPY_TYPES value) { + const enum NPY_TYPES neg_one = (enum NPY_TYPES) ((enum NPY_TYPES) 0 - (enum NPY_TYPES) 1), const_zero = (enum NPY_TYPES) 0; + const int is_unsigned = neg_one > const_zero; + if (is_unsigned) { + if (sizeof(enum NPY_TYPES) < sizeof(long)) { + return PyInt_FromLong((long) value); + } else if (sizeof(enum NPY_TYPES) <= sizeof(unsigned long)) { + return PyLong_FromUnsignedLong((unsigned long) value); +#ifdef HAVE_LONG_LONG + } else if (sizeof(enum NPY_TYPES) <= sizeof(unsigned PY_LONG_LONG)) { + return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); +#endif + } + } else { + if (sizeof(enum NPY_TYPES) <= sizeof(long)) { + return PyInt_FromLong((long) value); +#ifdef HAVE_LONG_LONG + } else if (sizeof(enum NPY_TYPES) <= sizeof(PY_LONG_LONG)) { + return PyLong_FromLongLong((PY_LONG_LONG) value); +#endif + } + } + { + int one = 1; int little = (int)*(unsigned char *)&one; + unsigned char *bytes = (unsigned char *)&value; + return _PyLong_FromByteArray(bytes, sizeof(enum NPY_TYPES), + little, !is_unsigned); + } +} + +/* CIntFromPy */ + static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { + const int neg_one = (int) ((int) 0 - (int) 1), const_zero = (int) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { @@ -6170,27 +8079,27 @@ static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { case 2: if (8 * sizeof(int) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) >= 2 * PyLong_SHIFT) { - return (int) (((((int)digits[1]) << PyLong_SHIFT) | digits[0])); + return (int) (((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0])); } } break; case 3: if (8 * sizeof(int) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) >= 3 * PyLong_SHIFT) { - return (int) (((((((int)digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0])); + return (int) (((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0])); } } break; case 4: if (8 * sizeof(int) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) >= 4 * PyLong_SHIFT) { - return (int) (((((((((int)digits[3]) << PyLong_SHIFT) | digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0])); + return (int) (((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0])); } } break; @@ -6211,67 +8120,69 @@ static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { #endif if (sizeof(int) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(int, unsigned long, PyLong_AsUnsignedLong(x)) +#ifdef HAVE_LONG_LONG } else if (sizeof(int) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(int, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) +#endif } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (int) 0; - case -1: __PYX_VERIFY_RETURN_INT(int, sdigit, -(sdigit) digits[0]) + case -1: __PYX_VERIFY_RETURN_INT(int, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(int, digit, +digits[0]) case -2: if (8 * sizeof(int) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) - 1 > 2 * PyLong_SHIFT) { - return (int) -(((((int)digits[1]) << PyLong_SHIFT) | digits[0])); + return (int) (((int)-1)*(((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; case 2: if (8 * sizeof(int) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) - 1 > 2 * PyLong_SHIFT) { - return (int) (((((int)digits[1]) << PyLong_SHIFT) | digits[0])); + return (int) ((((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; case -3: if (8 * sizeof(int) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) - 1 > 3 * PyLong_SHIFT) { - return (int) -(((((((int)digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0])); + return (int) (((int)-1)*(((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; case 3: if (8 * sizeof(int) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) - 1 > 3 * PyLong_SHIFT) { - return (int) (((((((int)digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0])); + return (int) ((((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; case -4: if (8 * sizeof(int) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) - 1 > 4 * PyLong_SHIFT) { - return (int) -(((((((((int)digits[3]) << PyLong_SHIFT) | digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0])); + return (int) (((int)-1)*(((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; case 4: if (8 * sizeof(int) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) - 1 > 4 * PyLong_SHIFT) { - return (int) (((((((((int)digits[3]) << PyLong_SHIFT) | digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0])); + return (int) ((((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; @@ -6279,8 +8190,10 @@ static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { #endif if (sizeof(int) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(int, long, PyLong_AsLong(x)) +#ifdef HAVE_LONG_LONG } else if (sizeof(int) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(int, PY_LONG_LONG, PyLong_AsLongLong(x)) +#endif } } { @@ -6289,7 +8202,7 @@ static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else int val; - PyObject *v = __Pyx_PyNumber_Int(x); + PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; @@ -6312,7 +8225,7 @@ static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { } } else { int val; - PyObject *tmp = __Pyx_PyNumber_Int(x); + PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (int) -1; val = __Pyx_PyInt_As_int(tmp); Py_DECREF(tmp); @@ -6328,314 +8241,27 @@ raise_neg_overflow: return (int) -1; } -static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value) { - const int neg_one = (int) -1, const_zero = (int) 0; - const int is_unsigned = neg_one > const_zero; - if (is_unsigned) { - if (sizeof(int) < sizeof(long)) { - return PyInt_FromLong((long) value); - } else if (sizeof(int) <= sizeof(unsigned long)) { - return PyLong_FromUnsignedLong((unsigned long) value); - } else if (sizeof(int) <= sizeof(unsigned PY_LONG_LONG)) { - return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); - } - } else { - if (sizeof(int) <= sizeof(long)) { - return PyInt_FromLong((long) value); - } else if (sizeof(int) <= sizeof(PY_LONG_LONG)) { - return PyLong_FromLongLong((PY_LONG_LONG) value); - } - } - { - int one = 1; int little = (int)*(unsigned char *)&one; - unsigned char *bytes = (unsigned char *)&value; - return _PyLong_FromByteArray(bytes, sizeof(int), - little, !is_unsigned); - } -} - -#if CYTHON_CCOMPLEX - #ifdef __cplusplus - static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) { - return ::std::complex< float >(x, y); - } - #else - static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) { - return x + y*(__pyx_t_float_complex)_Complex_I; - } - #endif -#else - static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) { - __pyx_t_float_complex z; - z.real = x; - z.imag = y; - return z; - } -#endif - -#if CYTHON_CCOMPLEX -#else - static CYTHON_INLINE int __Pyx_c_eqf(__pyx_t_float_complex a, __pyx_t_float_complex b) { - return (a.real == b.real) && (a.imag == b.imag); - } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sumf(__pyx_t_float_complex a, __pyx_t_float_complex b) { - __pyx_t_float_complex z; - z.real = a.real + b.real; - z.imag = a.imag + b.imag; - return z; - } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_difff(__pyx_t_float_complex a, __pyx_t_float_complex b) { - __pyx_t_float_complex z; - z.real = a.real - b.real; - z.imag = a.imag - b.imag; - return z; - } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_prodf(__pyx_t_float_complex a, __pyx_t_float_complex b) { - __pyx_t_float_complex z; - z.real = a.real * b.real - a.imag * b.imag; - z.imag = a.real * b.imag + a.imag * b.real; - return z; - } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quotf(__pyx_t_float_complex a, __pyx_t_float_complex b) { - __pyx_t_float_complex z; - float denom = b.real * b.real + b.imag * b.imag; - z.real = (a.real * b.real + a.imag * b.imag) / denom; - z.imag = (a.imag * b.real - a.real * b.imag) / denom; - return z; - } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_negf(__pyx_t_float_complex a) { - __pyx_t_float_complex z; - z.real = -a.real; - z.imag = -a.imag; - return z; - } - static CYTHON_INLINE int __Pyx_c_is_zerof(__pyx_t_float_complex a) { - return (a.real == 0) && (a.imag == 0); - } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conjf(__pyx_t_float_complex a) { - __pyx_t_float_complex z; - z.real = a.real; - z.imag = -a.imag; - return z; - } - #if 1 - static CYTHON_INLINE float __Pyx_c_absf(__pyx_t_float_complex z) { - #if !defined(HAVE_HYPOT) || defined(_MSC_VER) - return sqrtf(z.real*z.real + z.imag*z.imag); - #else - return hypotf(z.real, z.imag); - #endif - } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_powf(__pyx_t_float_complex a, __pyx_t_float_complex b) { - __pyx_t_float_complex z; - float r, lnr, theta, z_r, z_theta; - if (b.imag == 0 && b.real == (int)b.real) { - if (b.real < 0) { - float denom = a.real * a.real + a.imag * a.imag; - a.real = a.real / denom; - a.imag = -a.imag / denom; - b.real = -b.real; - } - switch ((int)b.real) { - case 0: - z.real = 1; - z.imag = 0; - return z; - case 1: - return a; - case 2: - z = __Pyx_c_prodf(a, a); - return __Pyx_c_prodf(a, a); - case 3: - z = __Pyx_c_prodf(a, a); - return __Pyx_c_prodf(z, a); - case 4: - z = __Pyx_c_prodf(a, a); - return __Pyx_c_prodf(z, z); - } - } - if (a.imag == 0) { - if (a.real == 0) { - return a; - } - r = a.real; - theta = 0; - } else { - r = __Pyx_c_absf(a); - theta = atan2f(a.imag, a.real); - } - lnr = logf(r); - z_r = expf(lnr * b.real - theta * b.imag); - z_theta = theta * b.real + lnr * b.imag; - z.real = z_r * cosf(z_theta); - z.imag = z_r * sinf(z_theta); - return z; - } - #endif -#endif - -#if CYTHON_CCOMPLEX - #ifdef __cplusplus - static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) { - return ::std::complex< double >(x, y); - } - #else - static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) { - return x + y*(__pyx_t_double_complex)_Complex_I; - } - #endif -#else - static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) { - __pyx_t_double_complex z; - z.real = x; - z.imag = y; - return z; - } -#endif - -#if CYTHON_CCOMPLEX -#else - static CYTHON_INLINE int __Pyx_c_eq(__pyx_t_double_complex a, __pyx_t_double_complex b) { - return (a.real == b.real) && (a.imag == b.imag); - } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum(__pyx_t_double_complex a, __pyx_t_double_complex b) { - __pyx_t_double_complex z; - z.real = a.real + b.real; - z.imag = a.imag + b.imag; - return z; - } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff(__pyx_t_double_complex a, __pyx_t_double_complex b) { - __pyx_t_double_complex z; - z.real = a.real - b.real; - z.imag = a.imag - b.imag; - return z; - } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_prod(__pyx_t_double_complex a, __pyx_t_double_complex b) { - __pyx_t_double_complex z; - z.real = a.real * b.real - a.imag * b.imag; - z.imag = a.real * b.imag + a.imag * b.real; - return z; - } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot(__pyx_t_double_complex a, __pyx_t_double_complex b) { - __pyx_t_double_complex z; - double denom = b.real * b.real + b.imag * b.imag; - z.real = (a.real * b.real + a.imag * b.imag) / denom; - z.imag = (a.imag * b.real - a.real * b.imag) / denom; - return z; - } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg(__pyx_t_double_complex a) { - __pyx_t_double_complex z; - z.real = -a.real; - z.imag = -a.imag; - return z; - } - static CYTHON_INLINE int __Pyx_c_is_zero(__pyx_t_double_complex a) { - return (a.real == 0) && (a.imag == 0); - } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj(__pyx_t_double_complex a) { - __pyx_t_double_complex z; - z.real = a.real; - z.imag = -a.imag; - return z; - } - #if 1 - static CYTHON_INLINE double __Pyx_c_abs(__pyx_t_double_complex z) { - #if !defined(HAVE_HYPOT) || defined(_MSC_VER) - return sqrt(z.real*z.real + z.imag*z.imag); - #else - return hypot(z.real, z.imag); - #endif - } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow(__pyx_t_double_complex a, __pyx_t_double_complex b) { - __pyx_t_double_complex z; - double r, lnr, theta, z_r, z_theta; - if (b.imag == 0 && b.real == (int)b.real) { - if (b.real < 0) { - double denom = a.real * a.real + a.imag * a.imag; - a.real = a.real / denom; - a.imag = -a.imag / denom; - b.real = -b.real; - } - switch ((int)b.real) { - case 0: - z.real = 1; - z.imag = 0; - return z; - case 1: - return a; - case 2: - z = __Pyx_c_prod(a, a); - return __Pyx_c_prod(a, a); - case 3: - z = __Pyx_c_prod(a, a); - return __Pyx_c_prod(z, a); - case 4: - z = __Pyx_c_prod(a, a); - return __Pyx_c_prod(z, z); - } - } - if (a.imag == 0) { - if (a.real == 0) { - return a; - } - r = a.real; - theta = 0; - } else { - r = __Pyx_c_abs(a); - theta = atan2(a.imag, a.real); - } - lnr = log(r); - z_r = exp(lnr * b.real - theta * b.imag); - z_theta = theta * b.real + lnr * b.imag; - z.real = z_r * cos(z_theta); - z.imag = z_r * sin(z_theta); - return z; - } - #endif -#endif - -static CYTHON_INLINE PyObject* __Pyx_PyInt_From_enum__NPY_TYPES(enum NPY_TYPES value) { - const enum NPY_TYPES neg_one = (enum NPY_TYPES) -1, const_zero = (enum NPY_TYPES) 0; - const int is_unsigned = neg_one > const_zero; - if (is_unsigned) { - if (sizeof(enum NPY_TYPES) < sizeof(long)) { - return PyInt_FromLong((long) value); - } else if (sizeof(enum NPY_TYPES) <= sizeof(unsigned long)) { - return PyLong_FromUnsignedLong((unsigned long) value); - } else if (sizeof(enum NPY_TYPES) <= sizeof(unsigned PY_LONG_LONG)) { - return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); - } - } else { - if (sizeof(enum NPY_TYPES) <= sizeof(long)) { - return PyInt_FromLong((long) value); - } else if (sizeof(enum NPY_TYPES) <= sizeof(PY_LONG_LONG)) { - return PyLong_FromLongLong((PY_LONG_LONG) value); - } - } - { - int one = 1; int little = (int)*(unsigned char *)&one; - unsigned char *bytes = (unsigned char *)&value; - return _PyLong_FromByteArray(bytes, sizeof(enum NPY_TYPES), - little, !is_unsigned); - } -} - -static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) { - const long neg_one = (long) -1, const_zero = (long) 0; +/* CIntToPy */ + static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) { + const long neg_one = (long) ((long) 0 - (long) 1), const_zero = (long) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(long) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(long) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); +#ifdef HAVE_LONG_LONG } else if (sizeof(long) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); +#endif } } else { if (sizeof(long) <= sizeof(long)) { return PyInt_FromLong((long) value); +#ifdef HAVE_LONG_LONG } else if (sizeof(long) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); +#endif } } { @@ -6646,8 +8272,9 @@ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) { } } -static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { - const long neg_one = (long) -1, const_zero = (long) 0; +/* CIntFromPy */ + static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { + const long neg_one = (long) ((long) 0 - (long) 1), const_zero = (long) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { @@ -6672,27 +8299,27 @@ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { case 2: if (8 * sizeof(long) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) >= 2 * PyLong_SHIFT) { - return (long) (((((long)digits[1]) << PyLong_SHIFT) | digits[0])); + return (long) (((((long)digits[1]) << PyLong_SHIFT) | (long)digits[0])); } } break; case 3: if (8 * sizeof(long) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) >= 3 * PyLong_SHIFT) { - return (long) (((((((long)digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0])); + return (long) (((((((long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0])); } } break; case 4: if (8 * sizeof(long) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) >= 4 * PyLong_SHIFT) { - return (long) (((((((((long)digits[3]) << PyLong_SHIFT) | digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0])); + return (long) (((((((((long)digits[3]) << PyLong_SHIFT) | (long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0])); } } break; @@ -6713,67 +8340,69 @@ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { #endif if (sizeof(long) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(long, unsigned long, PyLong_AsUnsignedLong(x)) +#ifdef HAVE_LONG_LONG } else if (sizeof(long) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(long, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) +#endif } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (long) 0; - case -1: __PYX_VERIFY_RETURN_INT(long, sdigit, -(sdigit) digits[0]) + case -1: __PYX_VERIFY_RETURN_INT(long, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(long, digit, +digits[0]) case -2: if (8 * sizeof(long) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(long, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(long, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) { - return (long) -(((((long)digits[1]) << PyLong_SHIFT) | digits[0])); + return (long) (((long)-1)*(((((long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); } } break; case 2: if (8 * sizeof(long) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) { - return (long) (((((long)digits[1]) << PyLong_SHIFT) | digits[0])); + return (long) ((((((long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); } } break; case -3: if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(long, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(long, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) { - return (long) -(((((((long)digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0])); + return (long) (((long)-1)*(((((((long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); } } break; case 3: if (8 * sizeof(long) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) { - return (long) (((((((long)digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0])); + return (long) ((((((((long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); } } break; case -4: if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(long, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(long, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) - 1 > 4 * PyLong_SHIFT) { - return (long) -(((((((((long)digits[3]) << PyLong_SHIFT) | digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0])); + return (long) (((long)-1)*(((((((((long)digits[3]) << PyLong_SHIFT) | (long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); } } break; case 4: if (8 * sizeof(long) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) - 1 > 4 * PyLong_SHIFT) { - return (long) (((((((((long)digits[3]) << PyLong_SHIFT) | digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0])); + return (long) ((((((((((long)digits[3]) << PyLong_SHIFT) | (long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); } } break; @@ -6781,8 +8410,10 @@ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { #endif if (sizeof(long) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(long, long, PyLong_AsLong(x)) +#ifdef HAVE_LONG_LONG } else if (sizeof(long) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(long, PY_LONG_LONG, PyLong_AsLongLong(x)) +#endif } } { @@ -6791,7 +8422,7 @@ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else long val; - PyObject *v = __Pyx_PyNumber_Int(x); + PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; @@ -6814,7 +8445,7 @@ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { } } else { long val; - PyObject *tmp = __Pyx_PyNumber_Int(x); + PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (long) -1; val = __Pyx_PyInt_As_long(tmp); Py_DECREF(tmp); @@ -6830,7 +8461,108 @@ raise_neg_overflow: return (long) -1; } -static int __Pyx_check_binary_version(void) { +/* FastTypeChecks */ + #if CYTHON_COMPILING_IN_CPYTHON +static int __Pyx_InBases(PyTypeObject *a, PyTypeObject *b) { + while (a) { + a = a->tp_base; + if (a == b) + return 1; + } + return b == &PyBaseObject_Type; +} +static CYTHON_INLINE int __Pyx_IsSubtype(PyTypeObject *a, PyTypeObject *b) { + PyObject *mro; + if (a == b) return 1; + mro = a->tp_mro; + if (likely(mro)) { + Py_ssize_t i, n; + n = PyTuple_GET_SIZE(mro); + for (i = 0; i < n; i++) { + if (PyTuple_GET_ITEM(mro, i) == (PyObject *)b) + return 1; + } + return 0; + } + return __Pyx_InBases(a, b); +} +#if PY_MAJOR_VERSION == 2 +static int __Pyx_inner_PyErr_GivenExceptionMatches2(PyObject *err, PyObject* exc_type1, PyObject* exc_type2) { + PyObject *exception, *value, *tb; + int res; + __Pyx_PyThreadState_declare + __Pyx_PyThreadState_assign + __Pyx_ErrFetch(&exception, &value, &tb); + res = exc_type1 ? PyObject_IsSubclass(err, exc_type1) : 0; + if (unlikely(res == -1)) { + PyErr_WriteUnraisable(err); + res = 0; + } + if (!res) { + res = PyObject_IsSubclass(err, exc_type2); + if (unlikely(res == -1)) { + PyErr_WriteUnraisable(err); + res = 0; + } + } + __Pyx_ErrRestore(exception, value, tb); + return res; +} +#else +static CYTHON_INLINE int __Pyx_inner_PyErr_GivenExceptionMatches2(PyObject *err, PyObject* exc_type1, PyObject *exc_type2) { + int res = exc_type1 ? __Pyx_IsSubtype((PyTypeObject*)err, (PyTypeObject*)exc_type1) : 0; + if (!res) { + res = __Pyx_IsSubtype((PyTypeObject*)err, (PyTypeObject*)exc_type2); + } + return res; +} +#endif +static int __Pyx_PyErr_GivenExceptionMatchesTuple(PyObject *exc_type, PyObject *tuple) { + Py_ssize_t i, n; + assert(PyExceptionClass_Check(exc_type)); + n = PyTuple_GET_SIZE(tuple); +#if PY_MAJOR_VERSION >= 3 + for (i=0; itp_basicsize; -#else - py_basicsize = PyObject_GetAttrString(result, "__basicsize__"); - if (!py_basicsize) - goto bad; - basicsize = PyLong_AsSsize_t(py_basicsize); - Py_DECREF(py_basicsize); - py_basicsize = 0; - if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred()) - goto bad; -#endif - if (!strict && (size_t)basicsize > size) { - PyOS_snprintf(warning, sizeof(warning), - "%s.%s size changed, may indicate binary incompatibility", - module_name, class_name); - if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad; - } - else if ((size_t)basicsize != size) { - PyErr_Format(PyExc_ValueError, - "%.200s.%.200s has the wrong size, try recompiling", - module_name, class_name); - goto bad; - } - return (PyTypeObject *)result; -bad: - Py_XDECREF(py_module); - Py_XDECREF(result); - return NULL; -} -#endif - -static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) { +/* InitStrings */ + static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) { while (t->p) { #if PY_MAJOR_VERSION < 3 if (t->is_unicode) { @@ -6951,6 +8603,8 @@ static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) { #endif if (!*t->p) return -1; + if (PyObject_Hash(*t->p) == -1) + return -1; ++t; } return 0; @@ -6959,50 +8613,57 @@ static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) { static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(const char* c_str) { return __Pyx_PyUnicode_FromStringAndSize(c_str, (Py_ssize_t)strlen(c_str)); } -static CYTHON_INLINE char* __Pyx_PyObject_AsString(PyObject* o) { +static CYTHON_INLINE const char* __Pyx_PyObject_AsString(PyObject* o) { Py_ssize_t ignore; return __Pyx_PyObject_AsStringAndSize(o, &ignore); } -static CYTHON_INLINE char* __Pyx_PyObject_AsStringAndSize(PyObject* o, Py_ssize_t *length) { -#if CYTHON_COMPILING_IN_CPYTHON && (__PYX_DEFAULT_STRING_ENCODING_IS_ASCII || __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT) +#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII || __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT +#if !CYTHON_PEP393_ENABLED +static const char* __Pyx_PyUnicode_AsStringAndSize(PyObject* o, Py_ssize_t *length) { + char* defenc_c; + PyObject* defenc = _PyUnicode_AsDefaultEncodedString(o, NULL); + if (!defenc) return NULL; + defenc_c = PyBytes_AS_STRING(defenc); +#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII + { + char* end = defenc_c + PyBytes_GET_SIZE(defenc); + char* c; + for (c = defenc_c; c < end; c++) { + if ((unsigned char) (*c) >= 128) { + PyUnicode_AsASCIIString(o); + return NULL; + } + } + } +#endif + *length = PyBytes_GET_SIZE(defenc); + return defenc_c; +} +#else +static CYTHON_INLINE const char* __Pyx_PyUnicode_AsStringAndSize(PyObject* o, Py_ssize_t *length) { + if (unlikely(__Pyx_PyUnicode_READY(o) == -1)) return NULL; +#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII + if (likely(PyUnicode_IS_ASCII(o))) { + *length = PyUnicode_GET_LENGTH(o); + return PyUnicode_AsUTF8(o); + } else { + PyUnicode_AsASCIIString(o); + return NULL; + } +#else + return PyUnicode_AsUTF8AndSize(o, length); +#endif +} +#endif +#endif +static CYTHON_INLINE const char* __Pyx_PyObject_AsStringAndSize(PyObject* o, Py_ssize_t *length) { +#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII || __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT if ( #if PY_MAJOR_VERSION < 3 && __PYX_DEFAULT_STRING_ENCODING_IS_ASCII __Pyx_sys_getdefaultencoding_not_ascii && #endif PyUnicode_Check(o)) { -#if PY_VERSION_HEX < 0x03030000 - char* defenc_c; - PyObject* defenc = _PyUnicode_AsDefaultEncodedString(o, NULL); - if (!defenc) return NULL; - defenc_c = PyBytes_AS_STRING(defenc); -#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII - { - char* end = defenc_c + PyBytes_GET_SIZE(defenc); - char* c; - for (c = defenc_c; c < end; c++) { - if ((unsigned char) (*c) >= 128) { - PyUnicode_AsASCIIString(o); - return NULL; - } - } - } -#endif - *length = PyBytes_GET_SIZE(defenc); - return defenc_c; -#else - if (__Pyx_PyUnicode_READY(o) == -1) return NULL; -#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII - if (PyUnicode_IS_ASCII(o)) { - *length = PyUnicode_GET_LENGTH(o); - return PyUnicode_AsUTF8(o); - } else { - PyUnicode_AsASCIIString(o); - return NULL; - } -#else - return PyUnicode_AsUTF8AndSize(o, length); -#endif -#endif + return __Pyx_PyUnicode_AsStringAndSize(o, length); } else #endif #if (!CYTHON_COMPILING_IN_PYPY) || (defined(PyByteArray_AS_STRING) && defined(PyByteArray_GET_SIZE)) @@ -7026,43 +8687,74 @@ static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) { if (is_true | (x == Py_False) | (x == Py_None)) return is_true; else return PyObject_IsTrue(x); } -static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x) { +static CYTHON_INLINE int __Pyx_PyObject_IsTrueAndDecref(PyObject* x) { + int retval; + if (unlikely(!x)) return -1; + retval = __Pyx_PyObject_IsTrue(x); + Py_DECREF(x); + return retval; +} +static PyObject* __Pyx_PyNumber_IntOrLongWrongResultType(PyObject* result, const char* type_name) { +#if PY_MAJOR_VERSION >= 3 + if (PyLong_Check(result)) { + if (PyErr_WarnFormat(PyExc_DeprecationWarning, 1, + "__int__ returned non-int (type %.200s). " + "The ability to return an instance of a strict subclass of int " + "is deprecated, and may be removed in a future version of Python.", + Py_TYPE(result)->tp_name)) { + Py_DECREF(result); + return NULL; + } + return result; + } +#endif + PyErr_Format(PyExc_TypeError, + "__%.4s__ returned non-%.4s (type %.200s)", + type_name, type_name, Py_TYPE(result)->tp_name); + Py_DECREF(result); + return NULL; +} +static CYTHON_INLINE PyObject* __Pyx_PyNumber_IntOrLong(PyObject* x) { +#if CYTHON_USE_TYPE_SLOTS PyNumberMethods *m; +#endif const char *name = NULL; PyObject *res = NULL; #if PY_MAJOR_VERSION < 3 - if (PyInt_Check(x) || PyLong_Check(x)) + if (likely(PyInt_Check(x) || PyLong_Check(x))) #else - if (PyLong_Check(x)) + if (likely(PyLong_Check(x))) #endif return __Pyx_NewRef(x); +#if CYTHON_USE_TYPE_SLOTS m = Py_TYPE(x)->tp_as_number; -#if PY_MAJOR_VERSION < 3 + #if PY_MAJOR_VERSION < 3 if (m && m->nb_int) { name = "int"; - res = PyNumber_Int(x); + res = m->nb_int(x); } else if (m && m->nb_long) { name = "long"; - res = PyNumber_Long(x); + res = m->nb_long(x); } -#else - if (m && m->nb_int) { + #else + if (likely(m && m->nb_int)) { name = "int"; - res = PyNumber_Long(x); + res = m->nb_int(x); + } + #endif +#else + if (!PyBytes_CheckExact(x) && !PyUnicode_CheckExact(x)) { + res = PyNumber_Int(x); } #endif - if (res) { + if (likely(res)) { #if PY_MAJOR_VERSION < 3 - if (!PyInt_Check(res) && !PyLong_Check(res)) { + if (unlikely(!PyInt_Check(res) && !PyLong_Check(res))) { #else - if (!PyLong_Check(res)) { + if (unlikely(!PyLong_CheckExact(res))) { #endif - PyErr_Format(PyExc_TypeError, - "__%.4s__ returned non-%.4s (type %.200s)", - name, name, Py_TYPE(res)->tp_name); - Py_DECREF(res); - return NULL; + return __Pyx_PyNumber_IntOrLongWrongResultType(res, name); } } else if (!PyErr_Occurred()) { @@ -7079,7 +8771,7 @@ static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) { if (sizeof(Py_ssize_t) >= sizeof(long)) return PyInt_AS_LONG(b); else - return PyInt_AsSsize_t(x); + return PyInt_AsSsize_t(b); } #endif if (likely(PyLong_CheckExact(b))) { @@ -7094,32 +8786,32 @@ static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) { switch (size) { case 2: if (8 * sizeof(Py_ssize_t) > 2 * PyLong_SHIFT) { - return (Py_ssize_t) (((((size_t)digits[1]) << PyLong_SHIFT) | digits[0])); + return (Py_ssize_t) (((((size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); } break; case -2: if (8 * sizeof(Py_ssize_t) > 2 * PyLong_SHIFT) { - return -(Py_ssize_t) (((((size_t)digits[1]) << PyLong_SHIFT) | digits[0])); + return -(Py_ssize_t) (((((size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); } break; case 3: if (8 * sizeof(Py_ssize_t) > 3 * PyLong_SHIFT) { - return (Py_ssize_t) (((((((size_t)digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0])); + return (Py_ssize_t) (((((((size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); } break; case -3: if (8 * sizeof(Py_ssize_t) > 3 * PyLong_SHIFT) { - return -(Py_ssize_t) (((((((size_t)digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0])); + return -(Py_ssize_t) (((((((size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); } break; case 4: if (8 * sizeof(Py_ssize_t) > 4 * PyLong_SHIFT) { - return (Py_ssize_t) (((((((((size_t)digits[3]) << PyLong_SHIFT) | digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0])); + return (Py_ssize_t) (((((((((size_t)digits[3]) << PyLong_SHIFT) | (size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); } break; case -4: if (8 * sizeof(Py_ssize_t) > 4 * PyLong_SHIFT) { - return -(Py_ssize_t) (((((((((size_t)digits[3]) << PyLong_SHIFT) | digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0])); + return -(Py_ssize_t) (((((((((size_t)digits[3]) << PyLong_SHIFT) | (size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); } break; } @@ -7133,6 +8825,9 @@ static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) { Py_DECREF(x); return ival; } +static CYTHON_INLINE PyObject * __Pyx_PyBool_FromLong(long b) { + return b ? __Pyx_NewRef(Py_True) : __Pyx_NewRef(Py_False); +} static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) { return PyInt_FromSize_t(ival); } diff --git a/GPy/kern/src/stationary_cython.c b/GPy/kern/src/stationary_cython.c index 946b3031..4a1bb32d 100644 --- a/GPy/kern/src/stationary_cython.c +++ b/GPy/kern/src/stationary_cython.c @@ -1,16 +1,18 @@ -/* Generated by Cython 0.23.3 */ +/* Generated by Cython 0.29.2 */ #define PY_SSIZE_T_CLEAN #include "Python.h" #ifndef Py_PYTHON_H #error Python headers needed to compile C extensions, please install development version of Python. -#elif PY_VERSION_HEX < 0x02060000 || (0x03000000 <= PY_VERSION_HEX && PY_VERSION_HEX < 0x03020000) - #error Cython requires Python 2.6+ or Python 3.2+. +#elif PY_VERSION_HEX < 0x02060000 || (0x03000000 <= PY_VERSION_HEX && PY_VERSION_HEX < 0x03030000) + #error Cython requires Python 2.6+ or Python 3.3+. #else -#define CYTHON_ABI "0_23_3" +#define CYTHON_ABI "0_29_2" +#define CYTHON_HEX_VERSION 0x001D02F0 +#define CYTHON_FUTURE_DIVISION 0 #include #ifndef offsetof -#define offsetof(type, member) ( (size_t) & ((type*)0) -> member ) + #define offsetof(type, member) ( (size_t) & ((type*)0) -> member ) #endif #if !defined(WIN32) && !defined(MS_WINDOWS) #ifndef __stdcall @@ -29,6 +31,12 @@ #ifndef DL_EXPORT #define DL_EXPORT(t) t #endif +#define __PYX_COMMA , +#ifndef HAVE_LONG_LONG + #if PY_VERSION_HEX >= 0x02070000 + #define HAVE_LONG_LONG + #endif +#endif #ifndef PY_LONG_LONG #define PY_LONG_LONG LONG_LONG #endif @@ -36,17 +44,262 @@ #define Py_HUGE_VAL HUGE_VAL #endif #ifdef PYPY_VERSION -#define CYTHON_COMPILING_IN_PYPY 1 -#define CYTHON_COMPILING_IN_CPYTHON 0 + #define CYTHON_COMPILING_IN_PYPY 1 + #define CYTHON_COMPILING_IN_PYSTON 0 + #define CYTHON_COMPILING_IN_CPYTHON 0 + #undef CYTHON_USE_TYPE_SLOTS + #define CYTHON_USE_TYPE_SLOTS 0 + #undef CYTHON_USE_PYTYPE_LOOKUP + #define CYTHON_USE_PYTYPE_LOOKUP 0 + #if PY_VERSION_HEX < 0x03050000 + #undef CYTHON_USE_ASYNC_SLOTS + #define CYTHON_USE_ASYNC_SLOTS 0 + #elif !defined(CYTHON_USE_ASYNC_SLOTS) + #define CYTHON_USE_ASYNC_SLOTS 1 + #endif + #undef CYTHON_USE_PYLIST_INTERNALS + #define CYTHON_USE_PYLIST_INTERNALS 0 + #undef CYTHON_USE_UNICODE_INTERNALS + #define CYTHON_USE_UNICODE_INTERNALS 0 + #undef CYTHON_USE_UNICODE_WRITER + #define CYTHON_USE_UNICODE_WRITER 0 + #undef CYTHON_USE_PYLONG_INTERNALS + #define CYTHON_USE_PYLONG_INTERNALS 0 + #undef CYTHON_AVOID_BORROWED_REFS + #define CYTHON_AVOID_BORROWED_REFS 1 + #undef CYTHON_ASSUME_SAFE_MACROS + #define CYTHON_ASSUME_SAFE_MACROS 0 + #undef CYTHON_UNPACK_METHODS + #define CYTHON_UNPACK_METHODS 0 + #undef CYTHON_FAST_THREAD_STATE + #define CYTHON_FAST_THREAD_STATE 0 + #undef CYTHON_FAST_PYCALL + #define CYTHON_FAST_PYCALL 0 + #undef CYTHON_PEP489_MULTI_PHASE_INIT + #define CYTHON_PEP489_MULTI_PHASE_INIT 0 + #undef CYTHON_USE_TP_FINALIZE + #define CYTHON_USE_TP_FINALIZE 0 + #undef CYTHON_USE_DICT_VERSIONS + #define CYTHON_USE_DICT_VERSIONS 0 + #undef CYTHON_USE_EXC_INFO_STACK + #define CYTHON_USE_EXC_INFO_STACK 0 +#elif defined(PYSTON_VERSION) + #define CYTHON_COMPILING_IN_PYPY 0 + #define CYTHON_COMPILING_IN_PYSTON 1 + #define CYTHON_COMPILING_IN_CPYTHON 0 + #ifndef CYTHON_USE_TYPE_SLOTS + #define CYTHON_USE_TYPE_SLOTS 1 + #endif + #undef CYTHON_USE_PYTYPE_LOOKUP + #define CYTHON_USE_PYTYPE_LOOKUP 0 + #undef CYTHON_USE_ASYNC_SLOTS + #define CYTHON_USE_ASYNC_SLOTS 0 + #undef CYTHON_USE_PYLIST_INTERNALS + #define CYTHON_USE_PYLIST_INTERNALS 0 + #ifndef CYTHON_USE_UNICODE_INTERNALS + #define CYTHON_USE_UNICODE_INTERNALS 1 + #endif + #undef CYTHON_USE_UNICODE_WRITER + #define CYTHON_USE_UNICODE_WRITER 0 + #undef CYTHON_USE_PYLONG_INTERNALS + #define CYTHON_USE_PYLONG_INTERNALS 0 + #ifndef CYTHON_AVOID_BORROWED_REFS + #define CYTHON_AVOID_BORROWED_REFS 0 + #endif + #ifndef CYTHON_ASSUME_SAFE_MACROS + #define CYTHON_ASSUME_SAFE_MACROS 1 + #endif + #ifndef CYTHON_UNPACK_METHODS + #define CYTHON_UNPACK_METHODS 1 + #endif + #undef CYTHON_FAST_THREAD_STATE + #define CYTHON_FAST_THREAD_STATE 0 + #undef CYTHON_FAST_PYCALL + #define CYTHON_FAST_PYCALL 0 + #undef CYTHON_PEP489_MULTI_PHASE_INIT + #define CYTHON_PEP489_MULTI_PHASE_INIT 0 + #undef CYTHON_USE_TP_FINALIZE + #define CYTHON_USE_TP_FINALIZE 0 + #undef CYTHON_USE_DICT_VERSIONS + #define CYTHON_USE_DICT_VERSIONS 0 + #undef CYTHON_USE_EXC_INFO_STACK + #define CYTHON_USE_EXC_INFO_STACK 0 #else -#define CYTHON_COMPILING_IN_PYPY 0 -#define CYTHON_COMPILING_IN_CPYTHON 1 + #define CYTHON_COMPILING_IN_PYPY 0 + #define CYTHON_COMPILING_IN_PYSTON 0 + #define CYTHON_COMPILING_IN_CPYTHON 1 + #ifndef CYTHON_USE_TYPE_SLOTS + #define CYTHON_USE_TYPE_SLOTS 1 + #endif + #if PY_VERSION_HEX < 0x02070000 + #undef CYTHON_USE_PYTYPE_LOOKUP + #define CYTHON_USE_PYTYPE_LOOKUP 0 + #elif !defined(CYTHON_USE_PYTYPE_LOOKUP) + #define CYTHON_USE_PYTYPE_LOOKUP 1 + #endif + #if PY_MAJOR_VERSION < 3 + #undef CYTHON_USE_ASYNC_SLOTS + #define CYTHON_USE_ASYNC_SLOTS 0 + #elif !defined(CYTHON_USE_ASYNC_SLOTS) + #define CYTHON_USE_ASYNC_SLOTS 1 + #endif + #if PY_VERSION_HEX < 0x02070000 + #undef CYTHON_USE_PYLONG_INTERNALS + #define CYTHON_USE_PYLONG_INTERNALS 0 + #elif !defined(CYTHON_USE_PYLONG_INTERNALS) + #define CYTHON_USE_PYLONG_INTERNALS 1 + #endif + #ifndef CYTHON_USE_PYLIST_INTERNALS + #define CYTHON_USE_PYLIST_INTERNALS 1 + #endif + #ifndef CYTHON_USE_UNICODE_INTERNALS + #define CYTHON_USE_UNICODE_INTERNALS 1 + #endif + #if PY_VERSION_HEX < 0x030300F0 + #undef CYTHON_USE_UNICODE_WRITER + #define CYTHON_USE_UNICODE_WRITER 0 + #elif !defined(CYTHON_USE_UNICODE_WRITER) + #define CYTHON_USE_UNICODE_WRITER 1 + #endif + #ifndef CYTHON_AVOID_BORROWED_REFS + #define CYTHON_AVOID_BORROWED_REFS 0 + #endif + #ifndef CYTHON_ASSUME_SAFE_MACROS + #define CYTHON_ASSUME_SAFE_MACROS 1 + #endif + #ifndef CYTHON_UNPACK_METHODS + #define CYTHON_UNPACK_METHODS 1 + #endif + #ifndef CYTHON_FAST_THREAD_STATE + #define CYTHON_FAST_THREAD_STATE 1 + #endif + #ifndef CYTHON_FAST_PYCALL + #define CYTHON_FAST_PYCALL 1 + #endif + #ifndef CYTHON_PEP489_MULTI_PHASE_INIT + #define CYTHON_PEP489_MULTI_PHASE_INIT (PY_VERSION_HEX >= 0x03050000) + #endif + #ifndef CYTHON_USE_TP_FINALIZE + #define CYTHON_USE_TP_FINALIZE (PY_VERSION_HEX >= 0x030400a1) + #endif + #ifndef CYTHON_USE_DICT_VERSIONS + #define CYTHON_USE_DICT_VERSIONS (PY_VERSION_HEX >= 0x030600B1) + #endif + #ifndef CYTHON_USE_EXC_INFO_STACK + #define CYTHON_USE_EXC_INFO_STACK (PY_VERSION_HEX >= 0x030700A3) + #endif #endif -#if !defined(CYTHON_USE_PYLONG_INTERNALS) && CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX >= 0x02070000 -#define CYTHON_USE_PYLONG_INTERNALS 1 +#if !defined(CYTHON_FAST_PYCCALL) +#define CYTHON_FAST_PYCCALL (CYTHON_FAST_PYCALL && PY_VERSION_HEX >= 0x030600B1) #endif +#if CYTHON_USE_PYLONG_INTERNALS + #include "longintrepr.h" + #undef SHIFT + #undef BASE + #undef MASK + #ifdef SIZEOF_VOID_P + enum { __pyx_check_sizeof_voidp = 1 / (int)(SIZEOF_VOID_P == sizeof(void*)) }; + #endif +#endif +#ifndef __has_attribute + #define __has_attribute(x) 0 +#endif +#ifndef __has_cpp_attribute + #define __has_cpp_attribute(x) 0 +#endif +#ifndef CYTHON_RESTRICT + #if defined(__GNUC__) + #define CYTHON_RESTRICT __restrict__ + #elif defined(_MSC_VER) && _MSC_VER >= 1400 + #define CYTHON_RESTRICT __restrict + #elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L + #define CYTHON_RESTRICT restrict + #else + #define CYTHON_RESTRICT + #endif +#endif +#ifndef CYTHON_UNUSED +# if defined(__GNUC__) +# if !(defined(__cplusplus)) || (__GNUC__ > 3 || (__GNUC__ == 3 && __GNUC_MINOR__ >= 4)) +# define CYTHON_UNUSED __attribute__ ((__unused__)) +# else +# define CYTHON_UNUSED +# endif +# elif defined(__ICC) || (defined(__INTEL_COMPILER) && !defined(_MSC_VER)) +# define CYTHON_UNUSED __attribute__ ((__unused__)) +# else +# define CYTHON_UNUSED +# endif +#endif +#ifndef CYTHON_MAYBE_UNUSED_VAR +# if defined(__cplusplus) + template void CYTHON_MAYBE_UNUSED_VAR( const T& ) { } +# else +# define CYTHON_MAYBE_UNUSED_VAR(x) (void)(x) +# endif +#endif +#ifndef CYTHON_NCP_UNUSED +# if CYTHON_COMPILING_IN_CPYTHON +# define CYTHON_NCP_UNUSED +# else +# define CYTHON_NCP_UNUSED CYTHON_UNUSED +# endif +#endif +#define __Pyx_void_to_None(void_result) ((void)(void_result), Py_INCREF(Py_None), Py_None) +#ifdef _MSC_VER + #ifndef _MSC_STDINT_H_ + #if _MSC_VER < 1300 + typedef unsigned char uint8_t; + typedef unsigned int uint32_t; + #else + typedef unsigned __int8 uint8_t; + typedef unsigned __int32 uint32_t; + #endif + #endif +#else + #include +#endif +#ifndef CYTHON_FALLTHROUGH + #if defined(__cplusplus) && __cplusplus >= 201103L + #if __has_cpp_attribute(fallthrough) + #define CYTHON_FALLTHROUGH [[fallthrough]] + #elif __has_cpp_attribute(clang::fallthrough) + #define CYTHON_FALLTHROUGH [[clang::fallthrough]] + #elif __has_cpp_attribute(gnu::fallthrough) + #define CYTHON_FALLTHROUGH [[gnu::fallthrough]] + #endif + #endif + #ifndef CYTHON_FALLTHROUGH + #if __has_attribute(fallthrough) + #define CYTHON_FALLTHROUGH __attribute__((fallthrough)) + #else + #define CYTHON_FALLTHROUGH + #endif + #endif + #if defined(__clang__ ) && defined(__apple_build_version__) + #if __apple_build_version__ < 7000000 + #undef CYTHON_FALLTHROUGH + #define CYTHON_FALLTHROUGH + #endif + #endif +#endif + +#ifndef CYTHON_INLINE + #if defined(__clang__) + #define CYTHON_INLINE __inline__ __attribute__ ((__unused__)) + #elif defined(__GNUC__) + #define CYTHON_INLINE __inline__ + #elif defined(_MSC_VER) + #define CYTHON_INLINE __inline + #elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L + #define CYTHON_INLINE inline + #else + #define CYTHON_INLINE + #endif +#endif + #if CYTHON_COMPILING_IN_PYPY && PY_VERSION_HEX < 0x02070600 && !defined(Py_OptimizeFlag) -#define Py_OptimizeFlag 0 + #define Py_OptimizeFlag 0 #endif #define __PYX_BUILD_PY_SSIZE_T "n" #define CYTHON_FORMAT_SSIZE_T "z" @@ -73,23 +326,145 @@ #ifndef Py_TPFLAGS_HAVE_FINALIZE #define Py_TPFLAGS_HAVE_FINALIZE 0 #endif +#ifndef METH_STACKLESS + #define METH_STACKLESS 0 +#endif +#if PY_VERSION_HEX <= 0x030700A3 || !defined(METH_FASTCALL) + #ifndef METH_FASTCALL + #define METH_FASTCALL 0x80 + #endif + typedef PyObject *(*__Pyx_PyCFunctionFast) (PyObject *self, PyObject *const *args, Py_ssize_t nargs); + typedef PyObject *(*__Pyx_PyCFunctionFastWithKeywords) (PyObject *self, PyObject *const *args, + Py_ssize_t nargs, PyObject *kwnames); +#else + #define __Pyx_PyCFunctionFast _PyCFunctionFast + #define __Pyx_PyCFunctionFastWithKeywords _PyCFunctionFastWithKeywords +#endif +#if CYTHON_FAST_PYCCALL +#define __Pyx_PyFastCFunction_Check(func)\ + ((PyCFunction_Check(func) && (METH_FASTCALL == (PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST | METH_KEYWORDS | METH_STACKLESS))))) +#else +#define __Pyx_PyFastCFunction_Check(func) 0 +#endif +#if CYTHON_USE_DICT_VERSIONS +#define __PYX_GET_DICT_VERSION(dict) (((PyDictObject*)(dict))->ma_version_tag) +#define __PYX_UPDATE_DICT_CACHE(dict, value, cache_var, version_var)\ + (version_var) = __PYX_GET_DICT_VERSION(dict);\ + (cache_var) = (value); +#define __PYX_PY_DICT_LOOKUP_IF_MODIFIED(VAR, DICT, LOOKUP) {\ + static PY_UINT64_T __pyx_dict_version = 0;\ + static PyObject *__pyx_dict_cached_value = NULL;\ + if (likely(__PYX_GET_DICT_VERSION(DICT) == __pyx_dict_version)) {\ + (VAR) = __pyx_dict_cached_value;\ + } else {\ + (VAR) = __pyx_dict_cached_value = (LOOKUP);\ + __pyx_dict_version = __PYX_GET_DICT_VERSION(DICT);\ + }\ + } +#else +#define __PYX_GET_DICT_VERSION(dict) (0) +#define __PYX_UPDATE_DICT_CACHE(dict, value, cache_var, version_var) +#define __PYX_PY_DICT_LOOKUP_IF_MODIFIED(VAR, DICT, LOOKUP) (VAR) = (LOOKUP); +#endif +#if CYTHON_COMPILING_IN_PYPY && !defined(PyObject_Malloc) + #define PyObject_Malloc(s) PyMem_Malloc(s) + #define PyObject_Free(p) PyMem_Free(p) + #define PyObject_Realloc(p) PyMem_Realloc(p) +#endif +#if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX < 0x030400A1 + #define PyMem_RawMalloc(n) PyMem_Malloc(n) + #define PyMem_RawRealloc(p, n) PyMem_Realloc(p, n) + #define PyMem_RawFree(p) PyMem_Free(p) +#endif +#if CYTHON_COMPILING_IN_PYSTON + #define __Pyx_PyCode_HasFreeVars(co) PyCode_HasFreeVars(co) + #define __Pyx_PyFrame_SetLineNumber(frame, lineno) PyFrame_SetLineNumber(frame, lineno) +#else + #define __Pyx_PyCode_HasFreeVars(co) (PyCode_GetNumFree(co) > 0) + #define __Pyx_PyFrame_SetLineNumber(frame, lineno) (frame)->f_lineno = (lineno) +#endif +#if !CYTHON_FAST_THREAD_STATE || PY_VERSION_HEX < 0x02070000 + #define __Pyx_PyThreadState_Current PyThreadState_GET() +#elif PY_VERSION_HEX >= 0x03060000 + #define __Pyx_PyThreadState_Current _PyThreadState_UncheckedGet() +#elif PY_VERSION_HEX >= 0x03000000 + #define __Pyx_PyThreadState_Current PyThreadState_GET() +#else + #define __Pyx_PyThreadState_Current _PyThreadState_Current +#endif +#if PY_VERSION_HEX < 0x030700A2 && !defined(PyThread_tss_create) && !defined(Py_tss_NEEDS_INIT) +#include "pythread.h" +#define Py_tss_NEEDS_INIT 0 +typedef int Py_tss_t; +static CYTHON_INLINE int PyThread_tss_create(Py_tss_t *key) { + *key = PyThread_create_key(); + return 0; // PyThread_create_key reports success always +} +static CYTHON_INLINE Py_tss_t * PyThread_tss_alloc(void) { + Py_tss_t *key = (Py_tss_t *)PyObject_Malloc(sizeof(Py_tss_t)); + *key = Py_tss_NEEDS_INIT; + return key; +} +static CYTHON_INLINE void PyThread_tss_free(Py_tss_t *key) { + PyObject_Free(key); +} +static CYTHON_INLINE int PyThread_tss_is_created(Py_tss_t *key) { + return *key != Py_tss_NEEDS_INIT; +} +static CYTHON_INLINE void PyThread_tss_delete(Py_tss_t *key) { + PyThread_delete_key(*key); + *key = Py_tss_NEEDS_INIT; +} +static CYTHON_INLINE int PyThread_tss_set(Py_tss_t *key, void *value) { + return PyThread_set_key_value(*key, value); +} +static CYTHON_INLINE void * PyThread_tss_get(Py_tss_t *key) { + return PyThread_get_key_value(*key); +} +#endif // TSS (Thread Specific Storage) API +#if CYTHON_COMPILING_IN_CPYTHON || defined(_PyDict_NewPresized) +#define __Pyx_PyDict_NewPresized(n) ((n <= 8) ? PyDict_New() : _PyDict_NewPresized(n)) +#else +#define __Pyx_PyDict_NewPresized(n) PyDict_New() +#endif +#if PY_MAJOR_VERSION >= 3 || CYTHON_FUTURE_DIVISION + #define __Pyx_PyNumber_Divide(x,y) PyNumber_TrueDivide(x,y) + #define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceTrueDivide(x,y) +#else + #define __Pyx_PyNumber_Divide(x,y) PyNumber_Divide(x,y) + #define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceDivide(x,y) +#endif +#if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX >= 0x030500A1 && CYTHON_USE_UNICODE_INTERNALS +#define __Pyx_PyDict_GetItemStr(dict, name) _PyDict_GetItem_KnownHash(dict, name, ((PyASCIIObject *) name)->hash) +#else +#define __Pyx_PyDict_GetItemStr(dict, name) PyDict_GetItem(dict, name) +#endif #if PY_VERSION_HEX > 0x03030000 && defined(PyUnicode_KIND) #define CYTHON_PEP393_ENABLED 1 #define __Pyx_PyUnicode_READY(op) (likely(PyUnicode_IS_READY(op)) ?\ 0 : _PyUnicode_Ready((PyObject *)(op))) #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_LENGTH(u) #define __Pyx_PyUnicode_READ_CHAR(u, i) PyUnicode_READ_CHAR(u, i) + #define __Pyx_PyUnicode_MAX_CHAR_VALUE(u) PyUnicode_MAX_CHAR_VALUE(u) #define __Pyx_PyUnicode_KIND(u) PyUnicode_KIND(u) #define __Pyx_PyUnicode_DATA(u) PyUnicode_DATA(u) #define __Pyx_PyUnicode_READ(k, d, i) PyUnicode_READ(k, d, i) + #define __Pyx_PyUnicode_WRITE(k, d, i, ch) PyUnicode_WRITE(k, d, i, ch) + #define __Pyx_PyUnicode_IS_TRUE(u) (0 != (likely(PyUnicode_IS_READY(u)) ? PyUnicode_GET_LENGTH(u) : PyUnicode_GET_SIZE(u))) #else #define CYTHON_PEP393_ENABLED 0 + #define PyUnicode_1BYTE_KIND 1 + #define PyUnicode_2BYTE_KIND 2 + #define PyUnicode_4BYTE_KIND 4 #define __Pyx_PyUnicode_READY(op) (0) #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_SIZE(u) #define __Pyx_PyUnicode_READ_CHAR(u, i) ((Py_UCS4)(PyUnicode_AS_UNICODE(u)[i])) + #define __Pyx_PyUnicode_MAX_CHAR_VALUE(u) ((sizeof(Py_UNICODE) == 2) ? 65535 : 1114111) #define __Pyx_PyUnicode_KIND(u) (sizeof(Py_UNICODE)) #define __Pyx_PyUnicode_DATA(u) ((void*)PyUnicode_AS_UNICODE(u)) #define __Pyx_PyUnicode_READ(k, d, i) ((void)(k), (Py_UCS4)(((Py_UNICODE*)d)[i])) + #define __Pyx_PyUnicode_WRITE(k, d, i, ch) (((void)(k)), ((Py_UNICODE*)d)[i] = ch) + #define __Pyx_PyUnicode_IS_TRUE(u) (0 != PyUnicode_GET_SIZE(u)) #endif #if CYTHON_COMPILING_IN_PYPY #define __Pyx_PyUnicode_Concat(a, b) PyNumber_Add(a, b) @@ -102,19 +477,29 @@ #if CYTHON_COMPILING_IN_PYPY && !defined(PyUnicode_Contains) #define PyUnicode_Contains(u, s) PySequence_Contains(u, s) #endif -#define __Pyx_PyString_FormatSafe(a, b) ((unlikely((a) == Py_None)) ? PyNumber_Remainder(a, b) : __Pyx_PyString_Format(a, b)) -#define __Pyx_PyUnicode_FormatSafe(a, b) ((unlikely((a) == Py_None)) ? PyNumber_Remainder(a, b) : PyUnicode_Format(a, b)) +#if CYTHON_COMPILING_IN_PYPY && !defined(PyByteArray_Check) + #define PyByteArray_Check(obj) PyObject_TypeCheck(obj, &PyByteArray_Type) +#endif +#if CYTHON_COMPILING_IN_PYPY && !defined(PyObject_Format) + #define PyObject_Format(obj, fmt) PyObject_CallMethod(obj, "__format__", "O", fmt) +#endif +#define __Pyx_PyString_FormatSafe(a, b) ((unlikely((a) == Py_None || (PyString_Check(b) && !PyString_CheckExact(b)))) ? PyNumber_Remainder(a, b) : __Pyx_PyString_Format(a, b)) +#define __Pyx_PyUnicode_FormatSafe(a, b) ((unlikely((a) == Py_None || (PyUnicode_Check(b) && !PyUnicode_CheckExact(b)))) ? PyNumber_Remainder(a, b) : PyUnicode_Format(a, b)) #if PY_MAJOR_VERSION >= 3 #define __Pyx_PyString_Format(a, b) PyUnicode_Format(a, b) #else #define __Pyx_PyString_Format(a, b) PyString_Format(a, b) #endif +#if PY_MAJOR_VERSION < 3 && !defined(PyObject_ASCII) + #define PyObject_ASCII(o) PyObject_Repr(o) +#endif #if PY_MAJOR_VERSION >= 3 #define PyBaseString_Type PyUnicode_Type #define PyStringObject PyUnicodeObject #define PyString_Type PyUnicode_Type #define PyString_Check PyUnicode_Check #define PyString_CheckExact PyUnicode_CheckExact + #define PyObject_Unicode PyObject_Str #endif #if PY_MAJOR_VERSION >= 3 #define __Pyx_PyBaseString_Check(obj) PyUnicode_Check(obj) @@ -126,7 +511,11 @@ #ifndef PySet_CheckExact #define PySet_CheckExact(obj) (Py_TYPE(obj) == &PySet_Type) #endif -#define __Pyx_TypeCheck(obj, type) PyObject_TypeCheck(obj, (PyTypeObject *)type) +#if CYTHON_ASSUME_SAFE_MACROS + #define __Pyx_PySequence_SIZE(seq) Py_SIZE(seq) +#else + #define __Pyx_PySequence_SIZE(seq) PySequence_Size(seq) +#endif #if PY_MAJOR_VERSION >= 3 #define PyIntObject PyLongObject #define PyInt_Type PyLong_Type @@ -161,46 +550,26 @@ #define __Pyx_PyInt_AsHash_t PyInt_AsSsize_t #endif #if PY_MAJOR_VERSION >= 3 - #define __Pyx_PyMethod_New(func, self, klass) ((self) ? PyMethod_New(func, self) : PyInstanceMethod_New(func)) + #define __Pyx_PyMethod_New(func, self, klass) ((self) ? PyMethod_New(func, self) : (Py_INCREF(func), func)) #else #define __Pyx_PyMethod_New(func, self, klass) PyMethod_New(func, self, klass) #endif -#if PY_VERSION_HEX >= 0x030500B1 -#define __Pyx_PyAsyncMethodsStruct PyAsyncMethods -#define __Pyx_PyType_AsAsync(obj) (Py_TYPE(obj)->tp_as_async) -#elif CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3 -typedef struct { - unaryfunc am_await; - unaryfunc am_aiter; - unaryfunc am_anext; -} __Pyx_PyAsyncMethodsStruct; -#define __Pyx_PyType_AsAsync(obj) ((__Pyx_PyAsyncMethodsStruct*) (Py_TYPE(obj)->tp_reserved)) +#if CYTHON_USE_ASYNC_SLOTS + #if PY_VERSION_HEX >= 0x030500B1 + #define __Pyx_PyAsyncMethodsStruct PyAsyncMethods + #define __Pyx_PyType_AsAsync(obj) (Py_TYPE(obj)->tp_as_async) + #else + #define __Pyx_PyType_AsAsync(obj) ((__Pyx_PyAsyncMethodsStruct*) (Py_TYPE(obj)->tp_reserved)) + #endif #else -#define __Pyx_PyType_AsAsync(obj) NULL + #define __Pyx_PyType_AsAsync(obj) NULL #endif -#ifndef CYTHON_RESTRICT - #if defined(__GNUC__) - #define CYTHON_RESTRICT __restrict__ - #elif defined(_MSC_VER) && _MSC_VER >= 1400 - #define CYTHON_RESTRICT __restrict - #elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L - #define CYTHON_RESTRICT restrict - #else - #define CYTHON_RESTRICT - #endif -#endif -#define __Pyx_void_to_None(void_result) (void_result, Py_INCREF(Py_None), Py_None) - -#ifndef CYTHON_INLINE - #if defined(__GNUC__) - #define CYTHON_INLINE __inline__ - #elif defined(_MSC_VER) - #define CYTHON_INLINE __inline - #elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L - #define CYTHON_INLINE inline - #else - #define CYTHON_INLINE - #endif +#ifndef __Pyx_PyAsyncMethodsStruct + typedef struct { + unaryfunc am_await; + unaryfunc am_aiter; + unaryfunc am_anext; + } __Pyx_PyAsyncMethodsStruct; #endif #if defined(WIN32) || defined(MS_WINDOWS) @@ -216,16 +585,18 @@ static CYTHON_INLINE float __PYX_NAN() { return value; } #endif - - -#if PY_MAJOR_VERSION >= 3 - #define __Pyx_PyNumber_Divide(x,y) PyNumber_TrueDivide(x,y) - #define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceTrueDivide(x,y) +#if defined(__CYGWIN__) && defined(_LDBL_EQ_DBL) +#define __Pyx_truncl trunc #else - #define __Pyx_PyNumber_Divide(x,y) PyNumber_Divide(x,y) - #define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceDivide(x,y) +#define __Pyx_truncl truncl #endif + +#define __PYX_ERR(f_index, lineno, Ln_error) \ +{ \ + __pyx_filename = __pyx_f[f_index]; __pyx_lineno = lineno; __pyx_clineno = __LINE__; goto Ln_error; \ +} + #ifndef __PYX_EXTERN_C #ifdef __cplusplus #define __PYX_EXTERN_C extern "C" @@ -234,45 +605,26 @@ static CYTHON_INLINE float __PYX_NAN() { #endif #endif -#define __PYX_HAVE__GPy__kern___src__stationary_cython -#define __PYX_HAVE_API__GPy__kern___src__stationary_cython -#include "string.h" -#include "stdio.h" -#include "stdlib.h" +#define __PYX_HAVE__GPy__kern__src__stationary_cython +#define __PYX_HAVE_API__GPy__kern__src__stationary_cython +/* Early includes */ +#include +#include #include "numpy/arrayobject.h" #include "numpy/ufuncobject.h" #include "stationary_utils.h" #include "pythread.h" +#include #include "pystate.h" #ifdef _OPENMP #include #endif /* _OPENMP */ -#ifdef PYREX_WITHOUT_ASSERTIONS +#if defined(PYREX_WITHOUT_ASSERTIONS) && !defined(CYTHON_WITHOUT_ASSERTIONS) #define CYTHON_WITHOUT_ASSERTIONS #endif -#ifndef CYTHON_UNUSED -# if defined(__GNUC__) -# if !(defined(__cplusplus)) || (__GNUC__ > 3 || (__GNUC__ == 3 && __GNUC_MINOR__ >= 4)) -# define CYTHON_UNUSED __attribute__ ((__unused__)) -# else -# define CYTHON_UNUSED -# endif -# elif defined(__ICC) || (defined(__INTEL_COMPILER) && !defined(_MSC_VER)) -# define CYTHON_UNUSED __attribute__ ((__unused__)) -# else -# define CYTHON_UNUSED -# endif -#endif -#ifndef CYTHON_NCP_UNUSED -# if CYTHON_COMPILING_IN_CPYTHON -# define CYTHON_NCP_UNUSED -# else -# define CYTHON_NCP_UNUSED CYTHON_UNUSED -# endif -#endif -typedef struct {PyObject **p; char *s; const Py_ssize_t n; const char* encoding; +typedef struct {PyObject **p; const char *s; const Py_ssize_t n; const char* encoding; const char is_unicode; const char is_str; const char intern; } __Pyx_StringTabEntry; #define __PYX_DEFAULT_STRING_ENCODING_IS_ASCII 0 @@ -292,6 +644,9 @@ typedef struct {PyObject **p; char *s; const Py_ssize_t n; const char* encoding; (sizeof(type) == sizeof(Py_ssize_t) &&\ (is_signed || likely(v < (type)PY_SSIZE_T_MAX ||\ v == (type)PY_SSIZE_T_MAX))) ) +static CYTHON_INLINE int __Pyx_is_valid_index(Py_ssize_t i, Py_ssize_t limit) { + return (size_t) i < (size_t) limit; +} #if defined (__cplusplus) && __cplusplus >= 201103L #include #define __Pyx_sst_abs(value) std::abs(value) @@ -299,17 +654,17 @@ typedef struct {PyObject **p; char *s; const Py_ssize_t n; const char* encoding; #define __Pyx_sst_abs(value) abs(value) #elif SIZEOF_LONG >= SIZEOF_SIZE_T #define __Pyx_sst_abs(value) labs(value) +#elif defined (_MSC_VER) + #define __Pyx_sst_abs(value) ((Py_ssize_t)_abs64(value)) #elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L #define __Pyx_sst_abs(value) llabs(value) -#elif defined (_MSC_VER) && defined (_M_X64) - #define __Pyx_sst_abs(value) _abs64(value) #elif defined (__GNUC__) #define __Pyx_sst_abs(value) __builtin_llabs(value) #else #define __Pyx_sst_abs(value) ((value<0) ? -value : value) #endif -static CYTHON_INLINE char* __Pyx_PyObject_AsString(PyObject*); -static CYTHON_INLINE char* __Pyx_PyObject_AsStringAndSize(PyObject*, Py_ssize_t* length); +static CYTHON_INLINE const char* __Pyx_PyObject_AsString(PyObject*); +static CYTHON_INLINE const char* __Pyx_PyObject_AsStringAndSize(PyObject*, Py_ssize_t* length); #define __Pyx_PyByteArray_FromString(s) PyByteArray_FromStringAndSize((const char*)s, strlen((const char*)s)) #define __Pyx_PyByteArray_FromStringAndSize(s, l) PyByteArray_FromStringAndSize((const char*)s, l) #define __Pyx_PyBytes_FromString PyBytes_FromString @@ -322,39 +677,52 @@ static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(const char*); #define __Pyx_PyStr_FromString __Pyx_PyUnicode_FromString #define __Pyx_PyStr_FromStringAndSize __Pyx_PyUnicode_FromStringAndSize #endif -#define __Pyx_PyObject_AsSString(s) ((signed char*) __Pyx_PyObject_AsString(s)) -#define __Pyx_PyObject_AsUString(s) ((unsigned char*) __Pyx_PyObject_AsString(s)) +#define __Pyx_PyBytes_AsWritableString(s) ((char*) PyBytes_AS_STRING(s)) +#define __Pyx_PyBytes_AsWritableSString(s) ((signed char*) PyBytes_AS_STRING(s)) +#define __Pyx_PyBytes_AsWritableUString(s) ((unsigned char*) PyBytes_AS_STRING(s)) +#define __Pyx_PyBytes_AsString(s) ((const char*) PyBytes_AS_STRING(s)) +#define __Pyx_PyBytes_AsSString(s) ((const signed char*) PyBytes_AS_STRING(s)) +#define __Pyx_PyBytes_AsUString(s) ((const unsigned char*) PyBytes_AS_STRING(s)) +#define __Pyx_PyObject_AsWritableString(s) ((char*) __Pyx_PyObject_AsString(s)) +#define __Pyx_PyObject_AsWritableSString(s) ((signed char*) __Pyx_PyObject_AsString(s)) +#define __Pyx_PyObject_AsWritableUString(s) ((unsigned char*) __Pyx_PyObject_AsString(s)) +#define __Pyx_PyObject_AsSString(s) ((const signed char*) __Pyx_PyObject_AsString(s)) +#define __Pyx_PyObject_AsUString(s) ((const unsigned char*) __Pyx_PyObject_AsString(s)) #define __Pyx_PyObject_FromCString(s) __Pyx_PyObject_FromString((const char*)s) #define __Pyx_PyBytes_FromCString(s) __Pyx_PyBytes_FromString((const char*)s) #define __Pyx_PyByteArray_FromCString(s) __Pyx_PyByteArray_FromString((const char*)s) #define __Pyx_PyStr_FromCString(s) __Pyx_PyStr_FromString((const char*)s) #define __Pyx_PyUnicode_FromCString(s) __Pyx_PyUnicode_FromString((const char*)s) -#if PY_MAJOR_VERSION < 3 -static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u) -{ +static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u) { const Py_UNICODE *u_end = u; while (*u_end++) ; return (size_t)(u_end - u - 1); } -#else -#define __Pyx_Py_UNICODE_strlen Py_UNICODE_strlen -#endif #define __Pyx_PyUnicode_FromUnicode(u) PyUnicode_FromUnicode(u, __Pyx_Py_UNICODE_strlen(u)) #define __Pyx_PyUnicode_FromUnicodeAndLength PyUnicode_FromUnicode #define __Pyx_PyUnicode_AsUnicode PyUnicode_AsUnicode #define __Pyx_NewRef(obj) (Py_INCREF(obj), obj) #define __Pyx_Owned_Py_None(b) __Pyx_NewRef(Py_None) -#define __Pyx_PyBool_FromLong(b) ((b) ? __Pyx_NewRef(Py_True) : __Pyx_NewRef(Py_False)) +static CYTHON_INLINE PyObject * __Pyx_PyBool_FromLong(long b); static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject*); -static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x); +static CYTHON_INLINE int __Pyx_PyObject_IsTrueAndDecref(PyObject*); +static CYTHON_INLINE PyObject* __Pyx_PyNumber_IntOrLong(PyObject* x); +#define __Pyx_PySequence_Tuple(obj)\ + (likely(PyTuple_CheckExact(obj)) ? __Pyx_NewRef(obj) : PySequence_Tuple(obj)) static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject*); static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t); -#if CYTHON_COMPILING_IN_CPYTHON +#if CYTHON_ASSUME_SAFE_MACROS #define __pyx_PyFloat_AsDouble(x) (PyFloat_CheckExact(x) ? PyFloat_AS_DOUBLE(x) : PyFloat_AsDouble(x)) #else #define __pyx_PyFloat_AsDouble(x) PyFloat_AsDouble(x) #endif #define __pyx_PyFloat_AsFloat(x) ((float) __pyx_PyFloat_AsDouble(x)) +#if PY_MAJOR_VERSION >= 3 +#define __Pyx_PyNumber_Int(x) (PyLong_CheckExact(x) ? __Pyx_NewRef(x) : PyNumber_Long(x)) +#else +#define __Pyx_PyNumber_Int(x) (PyInt_CheckExact(x) ? __Pyx_NewRef(x) : PyNumber_Int(x)) +#endif +#define __Pyx_PyNumber_Float(x) (PyFloat_CheckExact(x) ? __Pyx_NewRef(x) : PyNumber_Float(x)) #if PY_MAJOR_VERSION < 3 && __PYX_DEFAULT_STRING_ENCODING_IS_ASCII static int __Pyx_sys_getdefaultencoding_not_ascii; static int __Pyx_init_sys_getdefaultencoding_params(void) { @@ -418,7 +786,7 @@ static int __Pyx_init_sys_getdefaultencoding_params(void) { if (!default_encoding) goto bad; default_encoding_c = PyBytes_AsString(default_encoding); if (!default_encoding_c) goto bad; - __PYX_DEFAULT_STRING_ENCODING = (char*) malloc(strlen(default_encoding_c)); + __PYX_DEFAULT_STRING_ENCODING = (char*) malloc(strlen(default_encoding_c) + 1); if (!__PYX_DEFAULT_STRING_ENCODING) goto bad; strcpy(__PYX_DEFAULT_STRING_ENCODING, default_encoding_c); Py_DECREF(default_encoding); @@ -439,17 +807,21 @@ bad: #define likely(x) (x) #define unlikely(x) (x) #endif /* __GNUC__ */ +static CYTHON_INLINE void __Pyx_pretend_to_initialize(void* ptr) { (void)ptr; } -static PyObject *__pyx_m; +static PyObject *__pyx_m = NULL; static PyObject *__pyx_d; static PyObject *__pyx_b; +static PyObject *__pyx_cython_runtime = NULL; static PyObject *__pyx_empty_tuple; static PyObject *__pyx_empty_bytes; +static PyObject *__pyx_empty_unicode; static int __pyx_lineno; static int __pyx_clineno = 0; static const char * __pyx_cfilenm= __FILE__; static const char *__pyx_filename; +/* Header.proto */ #if !defined(CYTHON_CCOMPLEX) #if defined(__cplusplus) #define CYTHON_CCOMPLEX 1 @@ -473,11 +845,12 @@ static const char *__pyx_filename; static const char *__pyx_f[] = { - "GPy/kern/_src/stationary_cython.pyx", + "GPy/kern/src/stationary_cython.pyx", "__init__.pxd", - "GPy/kern/_src/stringsource", + "stringsource", "type.pxd", }; +/* BufferFormatStructs.proto */ #define IS_UNSIGNED(type) (((type) -1) > 0) struct __Pyx_StructField_; #define __PYX_BUF_FLAGS_PACKED_STRUCT (1 << 0) @@ -513,6 +886,14 @@ typedef struct { char is_valid_array; } __Pyx_BufFmt_Context; +/* NoFastGil.proto */ +#define __Pyx_PyGILState_Ensure PyGILState_Ensure +#define __Pyx_PyGILState_Release PyGILState_Release +#define __Pyx_FastGIL_Remember() +#define __Pyx_FastGIL_Forget() +#define __Pyx_FastGilFuncInit() + +/* MemviewSliceStruct.proto */ struct __pyx_memoryview_obj; typedef struct { struct __pyx_memoryview_obj *memview; @@ -521,7 +902,9 @@ typedef struct { Py_ssize_t strides[8]; Py_ssize_t suboffsets[8]; } __Pyx_memviewslice; +#define __Pyx_MemoryView_Len(m) (m.shape[0]) +/* Atomics.proto */ #include #ifndef CYTHON_ATOMICS #define CYTHON_ATOMICS 1 @@ -570,8 +953,13 @@ typedef volatile __pyx_atomic_int_type __pyx_atomic_int; __pyx_sub_acquisition_count_locked(__pyx_get_slice_count_pointer(memview), memview->lock) #endif +/* ForceInitThreads.proto */ +#ifndef __PYX_FORCE_INIT_THREADS + #define __PYX_FORCE_INIT_THREADS 0 +#endif -/* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":725 + +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":776 * # in Cython to enable them only on the right systems. * * ctypedef npy_int8 int8_t # <<<<<<<<<<<<<< @@ -580,7 +968,7 @@ typedef volatile __pyx_atomic_int_type __pyx_atomic_int; */ typedef npy_int8 __pyx_t_5numpy_int8_t; -/* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":726 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":777 * * ctypedef npy_int8 int8_t * ctypedef npy_int16 int16_t # <<<<<<<<<<<<<< @@ -589,7 +977,7 @@ typedef npy_int8 __pyx_t_5numpy_int8_t; */ typedef npy_int16 __pyx_t_5numpy_int16_t; -/* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":727 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":778 * ctypedef npy_int8 int8_t * ctypedef npy_int16 int16_t * ctypedef npy_int32 int32_t # <<<<<<<<<<<<<< @@ -598,7 +986,7 @@ typedef npy_int16 __pyx_t_5numpy_int16_t; */ typedef npy_int32 __pyx_t_5numpy_int32_t; -/* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":728 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":779 * ctypedef npy_int16 int16_t * ctypedef npy_int32 int32_t * ctypedef npy_int64 int64_t # <<<<<<<<<<<<<< @@ -607,7 +995,7 @@ typedef npy_int32 __pyx_t_5numpy_int32_t; */ typedef npy_int64 __pyx_t_5numpy_int64_t; -/* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":732 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":783 * #ctypedef npy_int128 int128_t * * ctypedef npy_uint8 uint8_t # <<<<<<<<<<<<<< @@ -616,7 +1004,7 @@ typedef npy_int64 __pyx_t_5numpy_int64_t; */ typedef npy_uint8 __pyx_t_5numpy_uint8_t; -/* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":733 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":784 * * ctypedef npy_uint8 uint8_t * ctypedef npy_uint16 uint16_t # <<<<<<<<<<<<<< @@ -625,7 +1013,7 @@ typedef npy_uint8 __pyx_t_5numpy_uint8_t; */ typedef npy_uint16 __pyx_t_5numpy_uint16_t; -/* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":734 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":785 * ctypedef npy_uint8 uint8_t * ctypedef npy_uint16 uint16_t * ctypedef npy_uint32 uint32_t # <<<<<<<<<<<<<< @@ -634,7 +1022,7 @@ typedef npy_uint16 __pyx_t_5numpy_uint16_t; */ typedef npy_uint32 __pyx_t_5numpy_uint32_t; -/* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":735 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":786 * ctypedef npy_uint16 uint16_t * ctypedef npy_uint32 uint32_t * ctypedef npy_uint64 uint64_t # <<<<<<<<<<<<<< @@ -643,7 +1031,7 @@ typedef npy_uint32 __pyx_t_5numpy_uint32_t; */ typedef npy_uint64 __pyx_t_5numpy_uint64_t; -/* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":739 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":790 * #ctypedef npy_uint128 uint128_t * * ctypedef npy_float32 float32_t # <<<<<<<<<<<<<< @@ -652,7 +1040,7 @@ typedef npy_uint64 __pyx_t_5numpy_uint64_t; */ typedef npy_float32 __pyx_t_5numpy_float32_t; -/* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":740 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":791 * * ctypedef npy_float32 float32_t * ctypedef npy_float64 float64_t # <<<<<<<<<<<<<< @@ -661,7 +1049,7 @@ typedef npy_float32 __pyx_t_5numpy_float32_t; */ typedef npy_float64 __pyx_t_5numpy_float64_t; -/* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":749 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":800 * # The int types are mapped a bit surprising -- * # numpy.int corresponds to 'l' and numpy.long to 'q' * ctypedef npy_long int_t # <<<<<<<<<<<<<< @@ -670,7 +1058,7 @@ typedef npy_float64 __pyx_t_5numpy_float64_t; */ typedef npy_long __pyx_t_5numpy_int_t; -/* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":750 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":801 * # numpy.int corresponds to 'l' and numpy.long to 'q' * ctypedef npy_long int_t * ctypedef npy_longlong long_t # <<<<<<<<<<<<<< @@ -679,7 +1067,7 @@ typedef npy_long __pyx_t_5numpy_int_t; */ typedef npy_longlong __pyx_t_5numpy_long_t; -/* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":751 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":802 * ctypedef npy_long int_t * ctypedef npy_longlong long_t * ctypedef npy_longlong longlong_t # <<<<<<<<<<<<<< @@ -688,7 +1076,7 @@ typedef npy_longlong __pyx_t_5numpy_long_t; */ typedef npy_longlong __pyx_t_5numpy_longlong_t; -/* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":753 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":804 * ctypedef npy_longlong longlong_t * * ctypedef npy_ulong uint_t # <<<<<<<<<<<<<< @@ -697,7 +1085,7 @@ typedef npy_longlong __pyx_t_5numpy_longlong_t; */ typedef npy_ulong __pyx_t_5numpy_uint_t; -/* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":754 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":805 * * ctypedef npy_ulong uint_t * ctypedef npy_ulonglong ulong_t # <<<<<<<<<<<<<< @@ -706,7 +1094,7 @@ typedef npy_ulong __pyx_t_5numpy_uint_t; */ typedef npy_ulonglong __pyx_t_5numpy_ulong_t; -/* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":755 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":806 * ctypedef npy_ulong uint_t * ctypedef npy_ulonglong ulong_t * ctypedef npy_ulonglong ulonglong_t # <<<<<<<<<<<<<< @@ -715,7 +1103,7 @@ typedef npy_ulonglong __pyx_t_5numpy_ulong_t; */ typedef npy_ulonglong __pyx_t_5numpy_ulonglong_t; -/* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":757 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":808 * ctypedef npy_ulonglong ulonglong_t * * ctypedef npy_intp intp_t # <<<<<<<<<<<<<< @@ -724,7 +1112,7 @@ typedef npy_ulonglong __pyx_t_5numpy_ulonglong_t; */ typedef npy_intp __pyx_t_5numpy_intp_t; -/* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":758 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":809 * * ctypedef npy_intp intp_t * ctypedef npy_uintp uintp_t # <<<<<<<<<<<<<< @@ -733,7 +1121,7 @@ typedef npy_intp __pyx_t_5numpy_intp_t; */ typedef npy_uintp __pyx_t_5numpy_uintp_t; -/* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":760 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":811 * ctypedef npy_uintp uintp_t * * ctypedef npy_double float_t # <<<<<<<<<<<<<< @@ -742,7 +1130,7 @@ typedef npy_uintp __pyx_t_5numpy_uintp_t; */ typedef npy_double __pyx_t_5numpy_float_t; -/* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":761 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":812 * * ctypedef npy_double float_t * ctypedef npy_double double_t # <<<<<<<<<<<<<< @@ -751,7 +1139,7 @@ typedef npy_double __pyx_t_5numpy_float_t; */ typedef npy_double __pyx_t_5numpy_double_t; -/* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":762 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":813 * ctypedef npy_double float_t * ctypedef npy_double double_t * ctypedef npy_longdouble longdouble_t # <<<<<<<<<<<<<< @@ -760,14 +1148,15 @@ typedef npy_double __pyx_t_5numpy_double_t; */ typedef npy_longdouble __pyx_t_5numpy_longdouble_t; -/* "GPy/kern/_src/stationary_cython.pyx":9 - * cimport cython +/* "GPy/kern/src/stationary_cython.pyx":11 + * np.import_array() * * ctypedef np.float64_t DTYPE_t # <<<<<<<<<<<<<< * * cdef extern from "stationary_utils.h": */ -typedef __pyx_t_5numpy_float64_t __pyx_t_3GPy_4kern_4_src_17stationary_cython_DTYPE_t; +typedef __pyx_t_5numpy_float64_t __pyx_t_3GPy_4kern_3src_17stationary_cython_DTYPE_t; +/* Declarations.proto */ #if CYTHON_CCOMPLEX #ifdef __cplusplus typedef ::std::complex< float > __pyx_t_float_complex; @@ -777,7 +1166,9 @@ typedef __pyx_t_5numpy_float64_t __pyx_t_3GPy_4kern_4_src_17stationary_cython_DT #else typedef struct { float real, imag; } __pyx_t_float_complex; #endif +static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float, float); +/* Declarations.proto */ #if CYTHON_CCOMPLEX #ifdef __cplusplus typedef ::std::complex< double > __pyx_t_double_complex; @@ -787,6 +1178,7 @@ typedef __pyx_t_5numpy_float64_t __pyx_t_3GPy_4kern_4_src_17stationary_cython_DT #else typedef struct { double real, imag; } __pyx_t_double_complex; #endif +static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double, double); /*--- Type declarations ---*/ @@ -795,7 +1187,7 @@ struct __pyx_MemviewEnum_obj; struct __pyx_memoryview_obj; struct __pyx_memoryviewslice_obj; -/* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":764 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":815 * ctypedef npy_longdouble longdouble_t * * ctypedef npy_cfloat cfloat_t # <<<<<<<<<<<<<< @@ -804,7 +1196,7 @@ struct __pyx_memoryviewslice_obj; */ typedef npy_cfloat __pyx_t_5numpy_cfloat_t; -/* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":765 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":816 * * ctypedef npy_cfloat cfloat_t * ctypedef npy_cdouble cdouble_t # <<<<<<<<<<<<<< @@ -813,7 +1205,7 @@ typedef npy_cfloat __pyx_t_5numpy_cfloat_t; */ typedef npy_cdouble __pyx_t_5numpy_cdouble_t; -/* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":766 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":817 * ctypedef npy_cfloat cfloat_t * ctypedef npy_cdouble cdouble_t * ctypedef npy_clongdouble clongdouble_t # <<<<<<<<<<<<<< @@ -822,7 +1214,7 @@ typedef npy_cdouble __pyx_t_5numpy_cdouble_t; */ typedef npy_clongdouble __pyx_t_5numpy_clongdouble_t; -/* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":768 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":819 * ctypedef npy_clongdouble clongdouble_t * * ctypedef npy_cdouble complex_t # <<<<<<<<<<<<<< @@ -831,7 +1223,7 @@ typedef npy_clongdouble __pyx_t_5numpy_clongdouble_t; */ typedef npy_cdouble __pyx_t_5numpy_complex_t; -/* "View.MemoryView":101 +/* "View.MemoryView":105 * * @cname("__pyx_array") * cdef class array: # <<<<<<<<<<<<<< @@ -840,6 +1232,7 @@ typedef npy_cdouble __pyx_t_5numpy_complex_t; */ struct __pyx_array_obj { PyObject_HEAD + struct __pyx_vtabstruct_array *__pyx_vtab; char *data; Py_ssize_t len; char *format; @@ -855,7 +1248,7 @@ struct __pyx_array_obj { }; -/* "View.MemoryView":271 +/* "View.MemoryView":279 * * @cname('__pyx_MemviewEnum') * cdef class Enum(object): # <<<<<<<<<<<<<< @@ -868,7 +1261,7 @@ struct __pyx_MemviewEnum_obj { }; -/* "View.MemoryView":304 +/* "View.MemoryView":330 * * @cname('__pyx_memoryview') * cdef class memoryview(object): # <<<<<<<<<<<<<< @@ -891,7 +1284,7 @@ struct __pyx_memoryview_obj { }; -/* "View.MemoryView":923 +/* "View.MemoryView":961 * * @cname('__pyx_memoryviewslice') * cdef class _memoryviewslice(memoryview): # <<<<<<<<<<<<<< @@ -908,7 +1301,21 @@ struct __pyx_memoryviewslice_obj { -/* "View.MemoryView":304 +/* "View.MemoryView":105 + * + * @cname("__pyx_array") + * cdef class array: # <<<<<<<<<<<<<< + * + * cdef: + */ + +struct __pyx_vtabstruct_array { + PyObject *(*get_memview)(struct __pyx_array_obj *); +}; +static struct __pyx_vtabstruct_array *__pyx_vtabptr_array; + + +/* "View.MemoryView":330 * * @cname('__pyx_memoryview') * cdef class memoryview(object): # <<<<<<<<<<<<<< @@ -928,7 +1335,7 @@ struct __pyx_vtabstruct_memoryview { static struct __pyx_vtabstruct_memoryview *__pyx_vtabptr_memoryview; -/* "View.MemoryView":923 +/* "View.MemoryView":961 * * @cname('__pyx_memoryviewslice') * cdef class _memoryviewslice(memoryview): # <<<<<<<<<<<<<< @@ -942,6 +1349,7 @@ struct __pyx_vtabstruct__memoryviewslice { static struct __pyx_vtabstruct__memoryviewslice *__pyx_vtabptr__memoryviewslice; /* --- Runtime support code (head) --- */ +/* Refnanny.proto */ #ifndef CYTHON_REFNANNY #define CYTHON_REFNANNY 0 #endif @@ -1004,42 +1412,92 @@ static struct __pyx_vtabstruct__memoryviewslice *__pyx_vtabptr__memoryviewslice; #define __Pyx_CLEAR(r) do { PyObject* tmp = ((PyObject*)(r)); r = NULL; __Pyx_DECREF(tmp);} while(0) #define __Pyx_XCLEAR(r) do { if((r) != NULL) {PyObject* tmp = ((PyObject*)(r)); r = NULL; __Pyx_DECREF(tmp);}} while(0) -#if CYTHON_COMPILING_IN_CPYTHON -static CYTHON_INLINE PyObject* __Pyx_PyObject_GetAttrStr(PyObject* obj, PyObject* attr_name) { - PyTypeObject* tp = Py_TYPE(obj); - if (likely(tp->tp_getattro)) - return tp->tp_getattro(obj, attr_name); -#if PY_MAJOR_VERSION < 3 - if (likely(tp->tp_getattr)) - return tp->tp_getattr(obj, PyString_AS_STRING(attr_name)); -#endif - return PyObject_GetAttr(obj, attr_name); -} +/* PyObjectGetAttrStr.proto */ +#if CYTHON_USE_TYPE_SLOTS +static CYTHON_INLINE PyObject* __Pyx_PyObject_GetAttrStr(PyObject* obj, PyObject* attr_name); #else #define __Pyx_PyObject_GetAttrStr(o,n) PyObject_GetAttr(o,n) #endif +/* GetBuiltinName.proto */ static PyObject *__Pyx_GetBuiltinName(PyObject *name); +/* RaiseArgTupleInvalid.proto */ static void __Pyx_RaiseArgtupleInvalid(const char* func_name, int exact, Py_ssize_t num_min, Py_ssize_t num_max, Py_ssize_t num_found); +/* RaiseDoubleKeywords.proto */ static void __Pyx_RaiseDoubleKeywordsError(const char* func_name, PyObject* kw_name); +/* ParseKeywords.proto */ static int __Pyx_ParseOptionalKeywords(PyObject *kwds, PyObject **argnames[],\ PyObject *kwds2, PyObject *values[], Py_ssize_t num_pos_args,\ const char* function_name); -static CYTHON_INLINE int __Pyx_ArgTypeTest(PyObject *obj, PyTypeObject *type, int none_allowed, - const char *name, int exact); +/* ArgTypeTest.proto */ +#define __Pyx_ArgTypeTest(obj, type, none_allowed, name, exact)\ + ((likely((Py_TYPE(obj) == type) | (none_allowed && (obj == Py_None)))) ? 1 :\ + __Pyx__ArgTypeTest(obj, type, name, exact)) +static int __Pyx__ArgTypeTest(PyObject *obj, PyTypeObject *type, const char *name, int exact); -static CYTHON_INLINE int __Pyx_GetBufferAndValidate(Py_buffer* buf, PyObject* obj, +/* IsLittleEndian.proto */ +static CYTHON_INLINE int __Pyx_Is_Little_Endian(void); + +/* BufferFormatCheck.proto */ +static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const char* ts); +static void __Pyx_BufFmt_Init(__Pyx_BufFmt_Context* ctx, + __Pyx_BufFmt_StackElem* stack, + __Pyx_TypeInfo* type); + +/* BufferGetAndValidate.proto */ +#define __Pyx_GetBufferAndValidate(buf, obj, dtype, flags, nd, cast, stack)\ + ((obj == Py_None || obj == NULL) ?\ + (__Pyx_ZeroBuffer(buf), 0) :\ + __Pyx__GetBufferAndValidate(buf, obj, dtype, flags, nd, cast, stack)) +static int __Pyx__GetBufferAndValidate(Py_buffer* buf, PyObject* obj, __Pyx_TypeInfo* dtype, int flags, int nd, int cast, __Pyx_BufFmt_StackElem* stack); +static void __Pyx_ZeroBuffer(Py_buffer* buf); static CYTHON_INLINE void __Pyx_SafeReleaseBuffer(Py_buffer* info); +static Py_ssize_t __Pyx_minusones[] = { -1, -1, -1, -1, -1, -1, -1, -1 }; +static Py_ssize_t __Pyx_zeros[] = { 0, 0, 0, 0, 0, 0, 0, 0 }; -static CYTHON_INLINE void __Pyx_ErrRestore(PyObject *type, PyObject *value, PyObject *tb); -static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb); +/* PyThreadStateGet.proto */ +#if CYTHON_FAST_THREAD_STATE +#define __Pyx_PyThreadState_declare PyThreadState *__pyx_tstate; +#define __Pyx_PyThreadState_assign __pyx_tstate = __Pyx_PyThreadState_Current; +#define __Pyx_PyErr_Occurred() __pyx_tstate->curexc_type +#else +#define __Pyx_PyThreadState_declare +#define __Pyx_PyThreadState_assign +#define __Pyx_PyErr_Occurred() PyErr_Occurred() +#endif +/* PyErrFetchRestore.proto */ +#if CYTHON_FAST_THREAD_STATE +#define __Pyx_PyErr_Clear() __Pyx_ErrRestore(NULL, NULL, NULL) +#define __Pyx_ErrRestoreWithState(type, value, tb) __Pyx_ErrRestoreInState(PyThreadState_GET(), type, value, tb) +#define __Pyx_ErrFetchWithState(type, value, tb) __Pyx_ErrFetchInState(PyThreadState_GET(), type, value, tb) +#define __Pyx_ErrRestore(type, value, tb) __Pyx_ErrRestoreInState(__pyx_tstate, type, value, tb) +#define __Pyx_ErrFetch(type, value, tb) __Pyx_ErrFetchInState(__pyx_tstate, type, value, tb) +static CYTHON_INLINE void __Pyx_ErrRestoreInState(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb); +static CYTHON_INLINE void __Pyx_ErrFetchInState(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb); +#if CYTHON_COMPILING_IN_CPYTHON +#define __Pyx_PyErr_SetNone(exc) (Py_INCREF(exc), __Pyx_ErrRestore((exc), NULL, NULL)) +#else +#define __Pyx_PyErr_SetNone(exc) PyErr_SetNone(exc) +#endif +#else +#define __Pyx_PyErr_Clear() PyErr_Clear() +#define __Pyx_PyErr_SetNone(exc) PyErr_SetNone(exc) +#define __Pyx_ErrRestoreWithState(type, value, tb) PyErr_Restore(type, value, tb) +#define __Pyx_ErrFetchWithState(type, value, tb) PyErr_Fetch(type, value, tb) +#define __Pyx_ErrRestoreInState(tstate, type, value, tb) PyErr_Restore(type, value, tb) +#define __Pyx_ErrFetchInState(tstate, type, value, tb) PyErr_Fetch(type, value, tb) +#define __Pyx_ErrRestore(type, value, tb) PyErr_Restore(type, value, tb) +#define __Pyx_ErrFetch(type, value, tb) PyErr_Fetch(type, value, tb) +#endif + +/* MemviewSliceInit.proto */ #define __Pyx_BUF_MAX_NDIMS %(BUF_MAX_NDIMS)d #define __Pyx_MEMVIEW_DIRECT 1 #define __Pyx_MEMVIEW_PTR 2 @@ -1065,77 +1523,141 @@ static CYTHON_INLINE int __pyx_sub_acquisition_count_locked( static CYTHON_INLINE void __Pyx_INC_MEMVIEW(__Pyx_memviewslice *, int, int); static CYTHON_INLINE void __Pyx_XDEC_MEMVIEW(__Pyx_memviewslice *, int, int); +/* PyObjectCall.proto */ #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyObject_Call(PyObject *func, PyObject *arg, PyObject *kw); #else #define __Pyx_PyObject_Call(func, arg, kw) PyObject_Call(func, arg, kw) #endif +/* RaiseException.proto */ static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause); -#if PY_MAJOR_VERSION >= 3 && !CYTHON_COMPILING_IN_PYPY -static PyObject *__Pyx_PyDict_GetItem(PyObject *d, PyObject* key) { - PyObject *value; - value = PyDict_GetItemWithError(d, key); - if (unlikely(!value)) { - if (!PyErr_Occurred()) { - PyObject* args = PyTuple_Pack(1, key); - if (likely(args)) - PyErr_SetObject(PyExc_KeyError, args); - Py_XDECREF(args); - } - return NULL; - } - Py_INCREF(value); - return value; -} +/* PyCFunctionFastCall.proto */ +#if CYTHON_FAST_PYCCALL +static CYTHON_INLINE PyObject *__Pyx_PyCFunction_FastCall(PyObject *func, PyObject **args, Py_ssize_t nargs); #else - #define __Pyx_PyDict_GetItem(d, key) PyObject_GetItem(d, key) +#define __Pyx_PyCFunction_FastCall(func, args, nargs) (assert(0), NULL) #endif +/* PyFunctionFastCall.proto */ +#if CYTHON_FAST_PYCALL +#define __Pyx_PyFunction_FastCall(func, args, nargs)\ + __Pyx_PyFunction_FastCallDict((func), (args), (nargs), NULL) +#if 1 || PY_VERSION_HEX < 0x030600B1 +static PyObject *__Pyx_PyFunction_FastCallDict(PyObject *func, PyObject **args, int nargs, PyObject *kwargs); +#else +#define __Pyx_PyFunction_FastCallDict(func, args, nargs, kwargs) _PyFunction_FastCallDict(func, args, nargs, kwargs) +#endif +#define __Pyx_BUILD_ASSERT_EXPR(cond)\ + (sizeof(char [1 - 2*!(cond)]) - 1) +#ifndef Py_MEMBER_SIZE +#define Py_MEMBER_SIZE(type, member) sizeof(((type *)0)->member) +#endif + static size_t __pyx_pyframe_localsplus_offset = 0; + #include "frameobject.h" + #define __Pxy_PyFrame_Initialize_Offsets()\ + ((void)__Pyx_BUILD_ASSERT_EXPR(sizeof(PyFrameObject) == offsetof(PyFrameObject, f_localsplus) + Py_MEMBER_SIZE(PyFrameObject, f_localsplus)),\ + (void)(__pyx_pyframe_localsplus_offset = ((size_t)PyFrame_Type.tp_basicsize) - Py_MEMBER_SIZE(PyFrameObject, f_localsplus))) + #define __Pyx_PyFrame_GetLocalsplus(frame)\ + (assert(__pyx_pyframe_localsplus_offset), (PyObject **)(((char *)(frame)) + __pyx_pyframe_localsplus_offset)) +#endif + +/* PyObjectCallMethO.proto */ +#if CYTHON_COMPILING_IN_CPYTHON +static CYTHON_INLINE PyObject* __Pyx_PyObject_CallMethO(PyObject *func, PyObject *arg); +#endif + +/* PyObjectCallOneArg.proto */ +static CYTHON_INLINE PyObject* __Pyx_PyObject_CallOneArg(PyObject *func, PyObject *arg); + +/* DictGetItem.proto */ +#if PY_MAJOR_VERSION >= 3 && !CYTHON_COMPILING_IN_PYPY +static PyObject *__Pyx_PyDict_GetItem(PyObject *d, PyObject* key); +#define __Pyx_PyObject_Dict_GetItem(obj, name)\ + (likely(PyDict_CheckExact(obj)) ?\ + __Pyx_PyDict_GetItem(obj, name) : PyObject_GetItem(obj, name)) +#else +#define __Pyx_PyDict_GetItem(d, key) PyObject_GetItem(d, key) +#define __Pyx_PyObject_Dict_GetItem(obj, name) PyObject_GetItem(obj, name) +#endif + +/* RaiseTooManyValuesToUnpack.proto */ static CYTHON_INLINE void __Pyx_RaiseTooManyValuesError(Py_ssize_t expected); +/* RaiseNeedMoreValuesToUnpack.proto */ static CYTHON_INLINE void __Pyx_RaiseNeedMoreValuesError(Py_ssize_t index); +/* RaiseNoneIterError.proto */ static CYTHON_INLINE void __Pyx_RaiseNoneNotIterableError(void); +/* ExtTypeTest.proto */ static CYTHON_INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type); +/* GetTopmostException.proto */ +#if CYTHON_USE_EXC_INFO_STACK +static _PyErr_StackItem * __Pyx_PyErr_GetTopmostException(PyThreadState *tstate); +#endif + +/* SaveResetException.proto */ +#if CYTHON_FAST_THREAD_STATE +#define __Pyx_ExceptionSave(type, value, tb) __Pyx__ExceptionSave(__pyx_tstate, type, value, tb) +static CYTHON_INLINE void __Pyx__ExceptionSave(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb); +#define __Pyx_ExceptionReset(type, value, tb) __Pyx__ExceptionReset(__pyx_tstate, type, value, tb) +static CYTHON_INLINE void __Pyx__ExceptionReset(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb); +#else +#define __Pyx_ExceptionSave(type, value, tb) PyErr_GetExcInfo(type, value, tb) +#define __Pyx_ExceptionReset(type, value, tb) PyErr_SetExcInfo(type, value, tb) +#endif + +/* PyErrExceptionMatches.proto */ +#if CYTHON_FAST_THREAD_STATE +#define __Pyx_PyErr_ExceptionMatches(err) __Pyx_PyErr_ExceptionMatchesInState(__pyx_tstate, err) +static CYTHON_INLINE int __Pyx_PyErr_ExceptionMatchesInState(PyThreadState* tstate, PyObject* err); +#else +#define __Pyx_PyErr_ExceptionMatches(err) PyErr_ExceptionMatches(err) +#endif + +/* GetException.proto */ +#if CYTHON_FAST_THREAD_STATE +#define __Pyx_GetException(type, value, tb) __Pyx__GetException(__pyx_tstate, type, value, tb) +static int __Pyx__GetException(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb); +#else +static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb); +#endif + +/* PyObjectCall2Args.proto */ +static CYTHON_UNUSED PyObject* __Pyx_PyObject_Call2Args(PyObject* function, PyObject* arg1, PyObject* arg2); + +/* IncludeStringH.proto */ #include +/* BytesEquals.proto */ static CYTHON_INLINE int __Pyx_PyBytes_Equals(PyObject* s1, PyObject* s2, int equals); +/* UnicodeEquals.proto */ static CYTHON_INLINE int __Pyx_PyUnicode_Equals(PyObject* s1, PyObject* s2, int equals); +/* StrEquals.proto */ #if PY_MAJOR_VERSION >= 3 #define __Pyx_PyString_Equals __Pyx_PyUnicode_Equals #else #define __Pyx_PyString_Equals __Pyx_PyBytes_Equals #endif +/* None.proto */ static CYTHON_INLINE Py_ssize_t __Pyx_div_Py_ssize_t(Py_ssize_t, Py_ssize_t); +/* UnaryNegOverflows.proto */ #define UNARY_NEG_WOULD_OVERFLOW(x)\ (((x) < 0) & ((unsigned long)(x) == 0-(unsigned long)(x))) static CYTHON_UNUSED int __pyx_array_getbuffer(PyObject *__pyx_v_self, Py_buffer *__pyx_v_info, int __pyx_v_flags); /*proto*/ -static PyObject *get_memview(PyObject *__pyx_v_self); /*proto*/ +static PyObject *__pyx_array_get_memview(struct __pyx_array_obj *); /*proto*/ +/* GetAttr.proto */ static CYTHON_INLINE PyObject *__Pyx_GetAttr(PyObject *, PyObject *); -static CYTHON_INLINE PyObject* __Pyx_decode_c_string( - const char* cstring, Py_ssize_t start, Py_ssize_t stop, - const char* encoding, const char* errors, - PyObject* (*decode_func)(const char *s, Py_ssize_t size, const char *errors)); - -static CYTHON_INLINE void __Pyx_ExceptionSave(PyObject **type, PyObject **value, PyObject **tb); -static void __Pyx_ExceptionReset(PyObject *type, PyObject *value, PyObject *tb); - -static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb); - -static CYTHON_INLINE void __Pyx_ExceptionSwap(PyObject **type, PyObject **value, PyObject **tb); - -static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level); - +/* GetItemInt.proto */ #define __Pyx_GetItemInt(o, i, type, is_signed, to_py_func, is_list, wraparound, boundscheck)\ (__Pyx_fits_Py_ssize_t(i, type, is_signed) ?\ __Pyx_GetItemInt_Fast(o, (Py_ssize_t)i, is_list, wraparound, boundscheck) :\ @@ -1153,15 +1675,88 @@ static CYTHON_INLINE PyObject *__Pyx_GetItemInt_List_Fast(PyObject *o, Py_ssize_ (PyErr_SetString(PyExc_IndexError, "tuple index out of range"), (PyObject*)NULL)) static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Tuple_Fast(PyObject *o, Py_ssize_t i, int wraparound, int boundscheck); -static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Generic(PyObject *o, PyObject* j); +static PyObject *__Pyx_GetItemInt_Generic(PyObject *o, PyObject* j); static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Fast(PyObject *o, Py_ssize_t i, int is_list, int wraparound, int boundscheck); -static CYTHON_UNUSED int __pyx_memoryview_getbuffer(PyObject *__pyx_v_self, Py_buffer *__pyx_v_info, int __pyx_v_flags); /*proto*/ -static PyObject *__pyx_memoryview_transpose(PyObject *__pyx_v_self); /*proto*/ -static PyObject *__pyx_memoryview__get__base(PyObject *__pyx_v_self); /*proto*/ -static PyObject *__pyx_memoryview_get_shape(PyObject *__pyx_v_self); /*proto*/ +/* ObjectGetItem.proto */ +#if CYTHON_USE_TYPE_SLOTS +static CYTHON_INLINE PyObject *__Pyx_PyObject_GetItem(PyObject *obj, PyObject* key); +#else +#define __Pyx_PyObject_GetItem(obj, key) PyObject_GetItem(obj, key) +#endif + +/* decode_c_string_utf16.proto */ +static CYTHON_INLINE PyObject *__Pyx_PyUnicode_DecodeUTF16(const char *s, Py_ssize_t size, const char *errors) { + int byteorder = 0; + return PyUnicode_DecodeUTF16(s, size, errors, &byteorder); +} +static CYTHON_INLINE PyObject *__Pyx_PyUnicode_DecodeUTF16LE(const char *s, Py_ssize_t size, const char *errors) { + int byteorder = -1; + return PyUnicode_DecodeUTF16(s, size, errors, &byteorder); +} +static CYTHON_INLINE PyObject *__Pyx_PyUnicode_DecodeUTF16BE(const char *s, Py_ssize_t size, const char *errors) { + int byteorder = 1; + return PyUnicode_DecodeUTF16(s, size, errors, &byteorder); +} + +/* decode_c_string.proto */ +static CYTHON_INLINE PyObject* __Pyx_decode_c_string( + const char* cstring, Py_ssize_t start, Py_ssize_t stop, + const char* encoding, const char* errors, + PyObject* (*decode_func)(const char *s, Py_ssize_t size, const char *errors)); + +/* GetAttr3.proto */ +static CYTHON_INLINE PyObject *__Pyx_GetAttr3(PyObject *, PyObject *, PyObject *); + +/* GetModuleGlobalName.proto */ +#if CYTHON_USE_DICT_VERSIONS +#define __Pyx_GetModuleGlobalName(var, name) {\ + static PY_UINT64_T __pyx_dict_version = 0;\ + static PyObject *__pyx_dict_cached_value = NULL;\ + (var) = (likely(__pyx_dict_version == __PYX_GET_DICT_VERSION(__pyx_d))) ?\ + (likely(__pyx_dict_cached_value) ? __Pyx_NewRef(__pyx_dict_cached_value) : __Pyx_GetBuiltinName(name)) :\ + __Pyx__GetModuleGlobalName(name, &__pyx_dict_version, &__pyx_dict_cached_value);\ +} +#define __Pyx_GetModuleGlobalNameUncached(var, name) {\ + PY_UINT64_T __pyx_dict_version;\ + PyObject *__pyx_dict_cached_value;\ + (var) = __Pyx__GetModuleGlobalName(name, &__pyx_dict_version, &__pyx_dict_cached_value);\ +} +static PyObject *__Pyx__GetModuleGlobalName(PyObject *name, PY_UINT64_T *dict_version, PyObject **dict_cached_value); +#else +#define __Pyx_GetModuleGlobalName(var, name) (var) = __Pyx__GetModuleGlobalName(name) +#define __Pyx_GetModuleGlobalNameUncached(var, name) (var) = __Pyx__GetModuleGlobalName(name) +static CYTHON_INLINE PyObject *__Pyx__GetModuleGlobalName(PyObject *name); +#endif + +/* SwapException.proto */ +#if CYTHON_FAST_THREAD_STATE +#define __Pyx_ExceptionSwap(type, value, tb) __Pyx__ExceptionSwap(__pyx_tstate, type, value, tb) +static CYTHON_INLINE void __Pyx__ExceptionSwap(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb); +#else +static CYTHON_INLINE void __Pyx_ExceptionSwap(PyObject **type, PyObject **value, PyObject **tb); +#endif + +/* Import.proto */ +static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level); + +/* FastTypeChecks.proto */ #if CYTHON_COMPILING_IN_CPYTHON +#define __Pyx_TypeCheck(obj, type) __Pyx_IsSubtype(Py_TYPE(obj), (PyTypeObject *)type) +static CYTHON_INLINE int __Pyx_IsSubtype(PyTypeObject *a, PyTypeObject *b); +static CYTHON_INLINE int __Pyx_PyErr_GivenExceptionMatches(PyObject *err, PyObject *type); +static CYTHON_INLINE int __Pyx_PyErr_GivenExceptionMatches2(PyObject *err, PyObject *type1, PyObject *type2); +#else +#define __Pyx_TypeCheck(obj, type) PyObject_TypeCheck(obj, (PyTypeObject *)type) +#define __Pyx_PyErr_GivenExceptionMatches(err, type) PyErr_GivenExceptionMatches(err, type) +#define __Pyx_PyErr_GivenExceptionMatches2(err, type1, type2) (PyErr_GivenExceptionMatches(err, type1) || PyErr_GivenExceptionMatches(err, type2)) +#endif +#define __Pyx_PyException_Check(obj) __Pyx_TypeCheck(obj, PyExc_Exception) + +static CYTHON_UNUSED int __pyx_memoryview_getbuffer(PyObject *__pyx_v_self, Py_buffer *__pyx_v_info, int __pyx_v_flags); /*proto*/ +/* ListCompAppend.proto */ +#if CYTHON_USE_PYLIST_INTERNALS && CYTHON_ASSUME_SAFE_MACROS static CYTHON_INLINE int __Pyx_ListComp_Append(PyObject* list, PyObject* x) { PyListObject* L = (PyListObject*) list; Py_ssize_t len = Py_SIZE(list); @@ -1177,19 +1772,15 @@ static CYTHON_INLINE int __Pyx_ListComp_Append(PyObject* list, PyObject* x) { #define __Pyx_ListComp_Append(L,x) PyList_Append(L,x) #endif -static PyObject *__pyx_memoryview_get_strides(PyObject *__pyx_v_self); /*proto*/ -static PyObject *__pyx_memoryview_get_suboffsets(PyObject *__pyx_v_self); /*proto*/ -static PyObject *__pyx_memoryview_get_ndim(PyObject *__pyx_v_self); /*proto*/ -static PyObject *__pyx_memoryview_get_itemsize(PyObject *__pyx_v_self); /*proto*/ -static PyObject *__pyx_memoryview_get_nbytes(PyObject *__pyx_v_self); /*proto*/ -static PyObject *__pyx_memoryview_get_size(PyObject *__pyx_v_self); /*proto*/ -#if CYTHON_COMPILING_IN_CPYTHON +/* PyIntBinop.proto */ +#if !CYTHON_COMPILING_IN_PYPY static PyObject* __Pyx_PyInt_AddObjC(PyObject *op1, PyObject *op2, long intval, int inplace); #else #define __Pyx_PyInt_AddObjC(op1, op2, intval, inplace)\ (inplace ? PyNumber_InPlaceAdd(op1, op2) : PyNumber_Add(op1, op2)) #endif +/* ListExtend.proto */ static CYTHON_INLINE int __Pyx_PyList_Extend(PyObject* L, PyObject* v) { #if CYTHON_COMPILING_IN_CPYTHON PyObject* none = _PyList_Extend((PyListObject*)L, v); @@ -1202,7 +1793,8 @@ static CYTHON_INLINE int __Pyx_PyList_Extend(PyObject* L, PyObject* v) { #endif } -#if CYTHON_COMPILING_IN_CPYTHON +/* ListAppend.proto */ +#if CYTHON_USE_PYLIST_INTERNALS && CYTHON_ASSUME_SAFE_MACROS static CYTHON_INLINE int __Pyx_PyList_Append(PyObject* list, PyObject* x) { PyListObject* L = (PyListObject*) list; Py_ssize_t len = Py_SIZE(list); @@ -1218,30 +1810,65 @@ static CYTHON_INLINE int __Pyx_PyList_Append(PyObject* list, PyObject* x) { #define __Pyx_PyList_Append(L,x) PyList_Append(L,x) #endif +/* None.proto */ static CYTHON_INLINE void __Pyx_RaiseUnboundLocalError(const char *varname); -#ifndef __PYX_FORCE_INIT_THREADS - #define __PYX_FORCE_INIT_THREADS 0 -#endif - +/* None.proto */ static CYTHON_INLINE long __Pyx_div_long(long, long); -static PyObject *__pyx_memoryviewslice__get__base(PyObject *__pyx_v_self); /*proto*/ +/* WriteUnraisableException.proto */ static void __Pyx_WriteUnraisable(const char *name, int clineno, int lineno, const char *filename, int full_traceback, int nogil); -#if CYTHON_COMPILING_IN_CPYTHON -static CYTHON_INLINE PyObject* __Pyx_PyObject_CallMethO(PyObject *func, PyObject *arg); +/* ImportFrom.proto */ +static PyObject* __Pyx_ImportFrom(PyObject* module, PyObject* name); + +/* HasAttr.proto */ +static CYTHON_INLINE int __Pyx_HasAttr(PyObject *, PyObject *); + +/* PyObject_GenericGetAttrNoDict.proto */ +#if CYTHON_USE_TYPE_SLOTS && CYTHON_USE_PYTYPE_LOOKUP && PY_VERSION_HEX < 0x03070000 +static CYTHON_INLINE PyObject* __Pyx_PyObject_GenericGetAttrNoDict(PyObject* obj, PyObject* attr_name); +#else +#define __Pyx_PyObject_GenericGetAttrNoDict PyObject_GenericGetAttr #endif -static CYTHON_INLINE PyObject* __Pyx_PyObject_CallOneArg(PyObject *func, PyObject *arg); +/* PyObject_GenericGetAttr.proto */ +#if CYTHON_USE_TYPE_SLOTS && CYTHON_USE_PYTYPE_LOOKUP && PY_VERSION_HEX < 0x03070000 +static PyObject* __Pyx_PyObject_GenericGetAttr(PyObject* obj, PyObject* attr_name); +#else +#define __Pyx_PyObject_GenericGetAttr PyObject_GenericGetAttr +#endif +/* SetVTable.proto */ static int __Pyx_SetVtable(PyObject *dict, void *vtable); +/* SetupReduce.proto */ +static int __Pyx_setup_reduce(PyObject* type_obj); + +/* TypeImport.proto */ +#ifndef __PYX_HAVE_RT_ImportType_proto +#define __PYX_HAVE_RT_ImportType_proto +enum __Pyx_ImportType_CheckSize { + __Pyx_ImportType_CheckSize_Error = 0, + __Pyx_ImportType_CheckSize_Warn = 1, + __Pyx_ImportType_CheckSize_Ignore = 2 +}; +static PyTypeObject *__Pyx_ImportType(PyObject* module, const char *module_name, const char *class_name, size_t size, enum __Pyx_ImportType_CheckSize check_size); +#endif + +/* CLineInTraceback.proto */ +#ifdef CYTHON_CLINE_IN_TRACEBACK +#define __Pyx_CLineForTraceback(tstate, c_line) (((CYTHON_CLINE_IN_TRACEBACK)) ? c_line : 0) +#else +static int __Pyx_CLineForTraceback(PyThreadState *tstate, int c_line); +#endif + +/* CodeObjectCache.proto */ typedef struct { - int code_line; PyCodeObject* code_object; + int code_line; } __Pyx_CodeObjectCacheEntry; struct __Pyx_CodeObjectCache { int count; @@ -1253,9 +1880,20 @@ static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int co static PyCodeObject *__pyx_find_code_object(int code_line); static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object); +/* AddTraceback.proto */ static void __Pyx_AddTraceback(const char *funcname, int c_line, int py_line, const char *filename); +#if PY_MAJOR_VERSION < 3 + static int __Pyx_GetBuffer(PyObject *obj, Py_buffer *view, int flags); + static void __Pyx_ReleaseBuffer(Py_buffer *view); +#else + #define __Pyx_GetBuffer PyObject_GetBuffer + #define __Pyx_ReleaseBuffer PyBuffer_Release +#endif + + +/* BufferStructDeclare.proto */ typedef struct { Py_ssize_t shape, strides, suboffsets; } __Pyx_Buf_DimInfo; @@ -1269,22 +1907,21 @@ typedef struct { __Pyx_Buf_DimInfo diminfo[8]; } __Pyx_LocalBuf_ND; -#if PY_MAJOR_VERSION < 3 - static int __Pyx_GetBuffer(PyObject *obj, Py_buffer *view, int flags); - static void __Pyx_ReleaseBuffer(Py_buffer *view); -#else - #define __Pyx_GetBuffer PyObject_GetBuffer - #define __Pyx_ReleaseBuffer PyBuffer_Release -#endif +/* MemviewSliceIsContig.proto */ +static int __pyx_memviewslice_is_contig(const __Pyx_memviewslice mvs, char order, int ndim); +/* OverlappingSlices.proto */ +static int __pyx_slices_overlap(__Pyx_memviewslice *slice1, + __Pyx_memviewslice *slice2, + int ndim, size_t itemsize); -static Py_ssize_t __Pyx_zeros[] = {0, 0, 0, 0, 0, 0, 0, 0}; -static Py_ssize_t __Pyx_minusones[] = {-1, -1, -1, -1, -1, -1, -1, -1}; - -static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *); +/* Capsule.proto */ +static CYTHON_INLINE PyObject *__pyx_capsule_create(void *p, const char *sig); +/* TypeInfoCompare.proto */ static int __pyx_typeinfo_cmp(__Pyx_TypeInfo *a, __Pyx_TypeInfo *b); +/* MemviewSliceValidateAndInit.proto */ static int __Pyx_ValidateAndInit_memviewslice( int *axes_specs, int c_or_f_flag, @@ -1295,12 +1932,16 @@ static int __Pyx_ValidateAndInit_memviewslice( __Pyx_memviewslice *memviewslice, PyObject *original_obj); -static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_dsds_double(PyObject *); +/* ObjectToMemviewSlice.proto */ +static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_dsds_double(PyObject *, int writable_flag); -static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_ds_double(PyObject *); +/* ObjectToMemviewSlice.proto */ +static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_ds_double(PyObject *, int writable_flag); +/* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value); +/* RealImag.proto */ #if CYTHON_CCOMPLEX #ifdef __cplusplus #define __Pyx_CREAL(z) ((z).real()) @@ -1313,7 +1954,8 @@ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value); #define __Pyx_CREAL(z) ((z).real) #define __Pyx_CIMAG(z) ((z).imag) #endif -#if (defined(_WIN32) || defined(__clang__)) && defined(__cplusplus) && CYTHON_CCOMPLEX +#if defined(__cplusplus) && CYTHON_CCOMPLEX\ + && (defined(_WIN32) || defined(__clang__) || (defined(__GNUC__) && (__GNUC__ >= 5 || __GNUC__ == 4 && __GNUC_MINOR__ >= 4 )) || __cplusplus >= 201103) #define __Pyx_SET_CREAL(z,x) ((z).real(x)) #define __Pyx_SET_CIMAG(z,y) ((z).imag(y)) #else @@ -1321,123 +1963,111 @@ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value); #define __Pyx_SET_CIMAG(z,y) __Pyx_CIMAG(z) = (y) #endif -static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float, float); - +/* Arithmetic.proto */ #if CYTHON_CCOMPLEX - #define __Pyx_c_eqf(a, b) ((a)==(b)) - #define __Pyx_c_sumf(a, b) ((a)+(b)) - #define __Pyx_c_difff(a, b) ((a)-(b)) - #define __Pyx_c_prodf(a, b) ((a)*(b)) - #define __Pyx_c_quotf(a, b) ((a)/(b)) - #define __Pyx_c_negf(a) (-(a)) + #define __Pyx_c_eq_float(a, b) ((a)==(b)) + #define __Pyx_c_sum_float(a, b) ((a)+(b)) + #define __Pyx_c_diff_float(a, b) ((a)-(b)) + #define __Pyx_c_prod_float(a, b) ((a)*(b)) + #define __Pyx_c_quot_float(a, b) ((a)/(b)) + #define __Pyx_c_neg_float(a) (-(a)) #ifdef __cplusplus - #define __Pyx_c_is_zerof(z) ((z)==(float)0) - #define __Pyx_c_conjf(z) (::std::conj(z)) + #define __Pyx_c_is_zero_float(z) ((z)==(float)0) + #define __Pyx_c_conj_float(z) (::std::conj(z)) #if 1 - #define __Pyx_c_absf(z) (::std::abs(z)) - #define __Pyx_c_powf(a, b) (::std::pow(a, b)) + #define __Pyx_c_abs_float(z) (::std::abs(z)) + #define __Pyx_c_pow_float(a, b) (::std::pow(a, b)) #endif #else - #define __Pyx_c_is_zerof(z) ((z)==0) - #define __Pyx_c_conjf(z) (conjf(z)) + #define __Pyx_c_is_zero_float(z) ((z)==0) + #define __Pyx_c_conj_float(z) (conjf(z)) #if 1 - #define __Pyx_c_absf(z) (cabsf(z)) - #define __Pyx_c_powf(a, b) (cpowf(a, b)) + #define __Pyx_c_abs_float(z) (cabsf(z)) + #define __Pyx_c_pow_float(a, b) (cpowf(a, b)) #endif #endif #else - static CYTHON_INLINE int __Pyx_c_eqf(__pyx_t_float_complex, __pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sumf(__pyx_t_float_complex, __pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_difff(__pyx_t_float_complex, __pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_prodf(__pyx_t_float_complex, __pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quotf(__pyx_t_float_complex, __pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_negf(__pyx_t_float_complex); - static CYTHON_INLINE int __Pyx_c_is_zerof(__pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conjf(__pyx_t_float_complex); + static CYTHON_INLINE int __Pyx_c_eq_float(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sum_float(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_diff_float(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_prod_float(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quot_float(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_neg_float(__pyx_t_float_complex); + static CYTHON_INLINE int __Pyx_c_is_zero_float(__pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conj_float(__pyx_t_float_complex); #if 1 - static CYTHON_INLINE float __Pyx_c_absf(__pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_powf(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE float __Pyx_c_abs_float(__pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_pow_float(__pyx_t_float_complex, __pyx_t_float_complex); #endif #endif -static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double, double); - +/* Arithmetic.proto */ #if CYTHON_CCOMPLEX - #define __Pyx_c_eq(a, b) ((a)==(b)) - #define __Pyx_c_sum(a, b) ((a)+(b)) - #define __Pyx_c_diff(a, b) ((a)-(b)) - #define __Pyx_c_prod(a, b) ((a)*(b)) - #define __Pyx_c_quot(a, b) ((a)/(b)) - #define __Pyx_c_neg(a) (-(a)) + #define __Pyx_c_eq_double(a, b) ((a)==(b)) + #define __Pyx_c_sum_double(a, b) ((a)+(b)) + #define __Pyx_c_diff_double(a, b) ((a)-(b)) + #define __Pyx_c_prod_double(a, b) ((a)*(b)) + #define __Pyx_c_quot_double(a, b) ((a)/(b)) + #define __Pyx_c_neg_double(a) (-(a)) #ifdef __cplusplus - #define __Pyx_c_is_zero(z) ((z)==(double)0) - #define __Pyx_c_conj(z) (::std::conj(z)) + #define __Pyx_c_is_zero_double(z) ((z)==(double)0) + #define __Pyx_c_conj_double(z) (::std::conj(z)) #if 1 - #define __Pyx_c_abs(z) (::std::abs(z)) - #define __Pyx_c_pow(a, b) (::std::pow(a, b)) + #define __Pyx_c_abs_double(z) (::std::abs(z)) + #define __Pyx_c_pow_double(a, b) (::std::pow(a, b)) #endif #else - #define __Pyx_c_is_zero(z) ((z)==0) - #define __Pyx_c_conj(z) (conj(z)) + #define __Pyx_c_is_zero_double(z) ((z)==0) + #define __Pyx_c_conj_double(z) (conj(z)) #if 1 - #define __Pyx_c_abs(z) (cabs(z)) - #define __Pyx_c_pow(a, b) (cpow(a, b)) + #define __Pyx_c_abs_double(z) (cabs(z)) + #define __Pyx_c_pow_double(a, b) (cpow(a, b)) #endif #endif #else - static CYTHON_INLINE int __Pyx_c_eq(__pyx_t_double_complex, __pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum(__pyx_t_double_complex, __pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff(__pyx_t_double_complex, __pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_prod(__pyx_t_double_complex, __pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot(__pyx_t_double_complex, __pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg(__pyx_t_double_complex); - static CYTHON_INLINE int __Pyx_c_is_zero(__pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj(__pyx_t_double_complex); + static CYTHON_INLINE int __Pyx_c_eq_double(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum_double(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff_double(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_prod_double(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot_double(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg_double(__pyx_t_double_complex); + static CYTHON_INLINE int __Pyx_c_is_zero_double(__pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj_double(__pyx_t_double_complex); #if 1 - static CYTHON_INLINE double __Pyx_c_abs(__pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE double __Pyx_c_abs_double(__pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow_double(__pyx_t_double_complex, __pyx_t_double_complex); #endif #endif +/* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_enum__NPY_TYPES(enum NPY_TYPES value); -static int __pyx_memviewslice_is_contig(const __Pyx_memviewslice *mvs, - char order, int ndim); - -static int __pyx_slices_overlap(__Pyx_memviewslice *slice1, - __Pyx_memviewslice *slice2, - int ndim, size_t itemsize); - +/* MemviewSliceCopyTemplate.proto */ static __Pyx_memviewslice __pyx_memoryview_copy_new_contig(const __Pyx_memviewslice *from_mvs, const char *mode, int ndim, size_t sizeof_dtype, int contig_flag, int dtype_is_object); -static CYTHON_INLINE PyObject *__pyx_capsule_create(void *p, const char *sig); - -static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value); - -static CYTHON_INLINE char __Pyx_PyInt_As_char(PyObject *); +/* CIntFromPy.proto */ +static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *); +/* CIntFromPy.proto */ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *); +/* CIntToPy.proto */ +static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value); + +/* CIntFromPy.proto */ +static CYTHON_INLINE char __Pyx_PyInt_As_char(PyObject *); + +/* CheckBinaryVersion.proto */ static int __Pyx_check_binary_version(void); -#if !defined(__Pyx_PyIdentifier_FromString) -#if PY_MAJOR_VERSION < 3 - #define __Pyx_PyIdentifier_FromString(s) PyString_FromString(s) -#else - #define __Pyx_PyIdentifier_FromString(s) PyUnicode_FromString(s) -#endif -#endif - -static PyObject *__Pyx_ImportModule(const char *name); - -static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name, size_t size, int strict); - +/* InitStrings.proto */ static int __Pyx_InitStrings(__Pyx_StringTabEntry *t); +static PyObject *__pyx_array_get_memview(struct __pyx_array_obj *__pyx_v_self); /* proto*/ static char *__pyx_memoryview_get_item_pointer(struct __pyx_memoryview_obj *__pyx_v_self, PyObject *__pyx_v_index); /* proto*/ static PyObject *__pyx_memoryview_is_slice(struct __pyx_memoryview_obj *__pyx_v_self, PyObject *__pyx_v_obj); /* proto*/ static PyObject *__pyx_memoryview_setitem_slice_assignment(struct __pyx_memoryview_obj *__pyx_v_self, PyObject *__pyx_v_dst, PyObject *__pyx_v_src); /* proto*/ @@ -1465,7 +2095,7 @@ static PyTypeObject *__pyx_ptype_7cpython_4type_type = 0; /* Module declarations from 'cpython.ref' */ -/* Module declarations from 'libc.stdlib' */ +/* Module declarations from 'cpython.mem' */ /* Module declarations from 'numpy' */ @@ -1476,12 +2106,13 @@ static PyTypeObject *__pyx_ptype_5numpy_broadcast = 0; static PyTypeObject *__pyx_ptype_5numpy_ndarray = 0; static PyTypeObject *__pyx_ptype_5numpy_ufunc = 0; static CYTHON_INLINE char *__pyx_f_5numpy__util_dtypestring(PyArray_Descr *, char *, char *, int *); /*proto*/ +static CYTHON_INLINE int __pyx_f_5numpy_import_array(void); /*proto*/ /* Module declarations from 'cython.view' */ /* Module declarations from 'cython' */ -/* Module declarations from 'GPy.kern._src.stationary_cython' */ +/* Module declarations from 'GPy.kern.src.stationary_cython' */ static PyTypeObject *__pyx_array_type = 0; static PyTypeObject *__pyx_MemviewEnum_type = 0; static PyTypeObject *__pyx_memoryview_type = 0; @@ -1491,6 +2122,8 @@ static PyObject *strided = 0; static PyObject *indirect = 0; static PyObject *contiguous = 0; static PyObject *indirect_contiguous = 0; +static int __pyx_memoryview_thread_locks_used; +static PyThread_type_lock __pyx_memoryview_thread_locks[8]; static struct __pyx_array_obj *__pyx_array_new(PyObject *, Py_ssize_t, char *, char *, char *); /*proto*/ static void *__pyx_align_pointer(void *, size_t); /*proto*/ static PyObject *__pyx_memoryview_new(PyObject *, int, int, __Pyx_TypeInfo *); /*proto*/ @@ -1523,144 +2156,160 @@ static void __pyx_memoryview_refcount_objects_in_slice_with_gil(char *, Py_ssize static void __pyx_memoryview_refcount_objects_in_slice(char *, Py_ssize_t *, Py_ssize_t *, int, int); /*proto*/ static void __pyx_memoryview_slice_assign_scalar(__Pyx_memviewslice *, int, size_t, void *, int); /*proto*/ static void __pyx_memoryview__slice_assign_scalar(char *, Py_ssize_t *, Py_ssize_t *, int, size_t, void *); /*proto*/ -static __Pyx_TypeInfo __Pyx_TypeInfo_nn___pyx_t_3GPy_4kern_4_src_17stationary_cython_DTYPE_t = { "DTYPE_t", NULL, sizeof(__pyx_t_3GPy_4kern_4_src_17stationary_cython_DTYPE_t), { 0 }, 0, 'R', 0, 0 }; +static PyObject *__pyx_unpickle_Enum__set_state(struct __pyx_MemviewEnum_obj *, PyObject *); /*proto*/ +static __Pyx_TypeInfo __Pyx_TypeInfo_nn___pyx_t_3GPy_4kern_3src_17stationary_cython_DTYPE_t = { "DTYPE_t", NULL, sizeof(__pyx_t_3GPy_4kern_3src_17stationary_cython_DTYPE_t), { 0 }, 0, 'R', 0, 0 }; static __Pyx_TypeInfo __Pyx_TypeInfo_double = { "double", NULL, sizeof(double), { 0 }, 0, 'R', 0, 0 }; -#define __Pyx_MODULE_NAME "GPy.kern._src.stationary_cython" -int __pyx_module_is_main_GPy__kern___src__stationary_cython = 0; +#define __Pyx_MODULE_NAME "GPy.kern.src.stationary_cython" +extern int __pyx_module_is_main_GPy__kern__src__stationary_cython; +int __pyx_module_is_main_GPy__kern__src__stationary_cython = 0; -/* Implementation of 'GPy.kern._src.stationary_cython' */ +/* Implementation of 'GPy.kern.src.stationary_cython' */ static PyObject *__pyx_builtin_range; static PyObject *__pyx_builtin_ValueError; static PyObject *__pyx_builtin_RuntimeError; +static PyObject *__pyx_builtin_ImportError; static PyObject *__pyx_builtin_MemoryError; static PyObject *__pyx_builtin_enumerate; -static PyObject *__pyx_builtin_Ellipsis; static PyObject *__pyx_builtin_TypeError; +static PyObject *__pyx_builtin_Ellipsis; static PyObject *__pyx_builtin_id; static PyObject *__pyx_builtin_IndexError; -static char __pyx_k_B[] = "B"; -static char __pyx_k_D[] = "D"; -static char __pyx_k_H[] = "H"; -static char __pyx_k_I[] = "I"; -static char __pyx_k_L[] = "L"; -static char __pyx_k_M[] = "M"; -static char __pyx_k_N[] = "N"; -static char __pyx_k_O[] = "O"; -static char __pyx_k_Q[] = "Q"; -static char __pyx_k_X[] = "_X"; -static char __pyx_k_b[] = "b"; -static char __pyx_k_c[] = "c"; -static char __pyx_k_d[] = "d"; -static char __pyx_k_f[] = "f"; -static char __pyx_k_g[] = "g"; -static char __pyx_k_h[] = "h"; -static char __pyx_k_i[] = "i"; -static char __pyx_k_l[] = "l"; -static char __pyx_k_m[] = "m"; -static char __pyx_k_n[] = "n"; -static char __pyx_k_q[] = "q"; -static char __pyx_k_X2[] = "_X2"; -static char __pyx_k_Zd[] = "Zd"; -static char __pyx_k_Zf[] = "Zf"; -static char __pyx_k_Zg[] = "Zg"; -static char __pyx_k_id[] = "id"; -static char __pyx_k_nd[] = "nd"; -static char __pyx_k_np[] = "np"; -static char __pyx_k_X_2[] = "X"; -static char __pyx_k_obj[] = "obj"; -static char __pyx_k_tmp[] = "_tmp"; -static char __pyx_k_X2_2[] = "X2"; -static char __pyx_k_base[] = "base"; -static char __pyx_k_dist[] = "dist"; -static char __pyx_k_grad[] = "_grad"; -static char __pyx_k_main[] = "__main__"; -static char __pyx_k_mode[] = "mode"; -static char __pyx_k_name[] = "name"; -static char __pyx_k_ndim[] = "ndim"; -static char __pyx_k_pack[] = "pack"; -static char __pyx_k_size[] = "size"; -static char __pyx_k_step[] = "step"; -static char __pyx_k_stop[] = "stop"; -static char __pyx_k_test[] = "__test__"; -static char __pyx_k_ASCII[] = "ASCII"; -static char __pyx_k_class[] = "__class__"; -static char __pyx_k_error[] = "error"; -static char __pyx_k_flags[] = "flags"; -static char __pyx_k_gradq[] = "gradq"; -static char __pyx_k_numpy[] = "numpy"; -static char __pyx_k_range[] = "range"; -static char __pyx_k_shape[] = "shape"; -static char __pyx_k_start[] = "start"; -static char __pyx_k_tmp_2[] = "tmp"; -static char __pyx_k_encode[] = "encode"; -static char __pyx_k_format[] = "format"; -static char __pyx_k_grad_2[] = "grad"; -static char __pyx_k_grad_X[] = "grad_X"; -static char __pyx_k_import[] = "__import__"; -static char __pyx_k_name_2[] = "__name__"; -static char __pyx_k_struct[] = "struct"; -static char __pyx_k_unpack[] = "unpack"; -static char __pyx_k_fortran[] = "fortran"; -static char __pyx_k_memview[] = "memview"; -static char __pyx_k_Ellipsis[] = "Ellipsis"; -static char __pyx_k_itemsize[] = "itemsize"; -static char __pyx_k_TypeError[] = "TypeError"; -static char __pyx_k_enumerate[] = "enumerate"; -static char __pyx_k_IndexError[] = "IndexError"; -static char __pyx_k_ValueError[] = "ValueError"; -static char __pyx_k_pyx_vtable[] = "__pyx_vtable__"; -static char __pyx_k_MemoryError[] = "MemoryError"; -static char __pyx_k_RuntimeError[] = "RuntimeError"; -static char __pyx_k_grad_X_cython[] = "grad_X_cython"; -static char __pyx_k_pyx_getbuffer[] = "__pyx_getbuffer"; -static char __pyx_k_allocate_buffer[] = "allocate_buffer"; -static char __pyx_k_dtype_is_object[] = "dtype_is_object"; -static char __pyx_k_lengthscale_grads[] = "lengthscale_grads"; -static char __pyx_k_strided_and_direct[] = ""; -static char __pyx_k_strided_and_indirect[] = ""; -static char __pyx_k_contiguous_and_direct[] = ""; -static char __pyx_k_MemoryView_of_r_object[] = ""; -static char __pyx_k_lengthscale_grads_in_c[] = "lengthscale_grads_in_c"; -static char __pyx_k_MemoryView_of_r_at_0x_x[] = ""; -static char __pyx_k_contiguous_and_indirect[] = ""; -static char __pyx_k_Cannot_index_with_type_s[] = "Cannot index with type '%s'"; -static char __pyx_k_getbuffer_obj_view_flags[] = "getbuffer(obj, view, flags)"; -static char __pyx_k_Dimension_d_is_not_direct[] = "Dimension %d is not direct"; -static char __pyx_k_Invalid_shape_in_axis_d_d[] = "Invalid shape in axis %d: %d."; -static char __pyx_k_Index_out_of_bounds_axis_d[] = "Index out of bounds (axis %d)"; -static char __pyx_k_Step_may_not_be_zero_axis_d[] = "Step may not be zero (axis %d)"; -static char __pyx_k_itemsize_0_for_cython_array[] = "itemsize <= 0 for cython.array"; -static char __pyx_k_ndarray_is_not_C_contiguous[] = "ndarray is not C contiguous"; -static char __pyx_k_Users_james_work_GPy_GPy_kern[] = "/Users/james/work/GPy/GPy/kern/_src/stationary_cython.pyx"; -static char __pyx_k_unable_to_allocate_array_data[] = "unable to allocate array data."; -static char __pyx_k_strided_and_direct_or_indirect[] = ""; -static char __pyx_k_GPy_kern__src_stationary_cython[] = "GPy.kern._src.stationary_cython"; -static char __pyx_k_unknown_dtype_code_in_numpy_pxd[] = "unknown dtype code in numpy.pxd (%d)"; -static char __pyx_k_All_dimensions_preceding_dimensi[] = "All dimensions preceding dimension %d must be indexed and not sliced"; -static char __pyx_k_Buffer_view_does_not_expose_stri[] = "Buffer view does not expose strides"; -static char __pyx_k_Can_only_create_a_buffer_that_is[] = "Can only create a buffer that is contiguous in memory."; -static char __pyx_k_Cannot_transpose_memoryview_with[] = "Cannot transpose memoryview with indirect dimensions"; -static char __pyx_k_Empty_shape_tuple_for_cython_arr[] = "Empty shape tuple for cython.array"; -static char __pyx_k_Format_string_allocated_too_shor[] = "Format string allocated too short, see comment in numpy.pxd"; -static char __pyx_k_Indirect_dimensions_not_supporte[] = "Indirect dimensions not supported"; -static char __pyx_k_Invalid_mode_expected_c_or_fortr[] = "Invalid mode, expected 'c' or 'fortran', got %s"; -static char __pyx_k_Non_native_byte_order_not_suppor[] = "Non-native byte order not supported"; -static char __pyx_k_Out_of_bounds_on_buffer_access_a[] = "Out of bounds on buffer access (axis %d)"; -static char __pyx_k_Unable_to_convert_item_to_object[] = "Unable to convert item to object"; -static char __pyx_k_got_differing_extents_in_dimensi[] = "got differing extents in dimension %d (got %d and %d)"; -static char __pyx_k_ndarray_is_not_Fortran_contiguou[] = "ndarray is not Fortran contiguous"; -static char __pyx_k_unable_to_allocate_shape_and_str[] = "unable to allocate shape and strides."; -static char __pyx_k_Format_string_allocated_too_shor_2[] = "Format string allocated too short."; +static const char __pyx_k_D[] = "D"; +static const char __pyx_k_M[] = "M"; +static const char __pyx_k_N[] = "N"; +static const char __pyx_k_O[] = "O"; +static const char __pyx_k_Q[] = "Q"; +static const char __pyx_k_X[] = "_X"; +static const char __pyx_k_c[] = "c"; +static const char __pyx_k_d[] = "d"; +static const char __pyx_k_m[] = "m"; +static const char __pyx_k_n[] = "n"; +static const char __pyx_k_q[] = "q"; +static const char __pyx_k_X2[] = "_X2"; +static const char __pyx_k_id[] = "id"; +static const char __pyx_k_nd[] = "nd"; +static const char __pyx_k_np[] = "np"; +static const char __pyx_k_X_2[] = "X"; +static const char __pyx_k_new[] = "__new__"; +static const char __pyx_k_obj[] = "obj"; +static const char __pyx_k_tmp[] = "_tmp"; +static const char __pyx_k_X2_2[] = "X2"; +static const char __pyx_k_base[] = "base"; +static const char __pyx_k_dict[] = "__dict__"; +static const char __pyx_k_dist[] = "dist"; +static const char __pyx_k_grad[] = "_grad"; +static const char __pyx_k_main[] = "__main__"; +static const char __pyx_k_mode[] = "mode"; +static const char __pyx_k_name[] = "name"; +static const char __pyx_k_ndim[] = "ndim"; +static const char __pyx_k_pack[] = "pack"; +static const char __pyx_k_size[] = "size"; +static const char __pyx_k_step[] = "step"; +static const char __pyx_k_stop[] = "stop"; +static const char __pyx_k_test[] = "__test__"; +static const char __pyx_k_ASCII[] = "ASCII"; +static const char __pyx_k_class[] = "__class__"; +static const char __pyx_k_error[] = "error"; +static const char __pyx_k_flags[] = "flags"; +static const char __pyx_k_gradq[] = "gradq"; +static const char __pyx_k_numpy[] = "numpy"; +static const char __pyx_k_range[] = "range"; +static const char __pyx_k_shape[] = "shape"; +static const char __pyx_k_start[] = "start"; +static const char __pyx_k_tmp_2[] = "tmp"; +static const char __pyx_k_encode[] = "encode"; +static const char __pyx_k_format[] = "format"; +static const char __pyx_k_grad_2[] = "grad"; +static const char __pyx_k_grad_X[] = "grad_X"; +static const char __pyx_k_import[] = "__import__"; +static const char __pyx_k_name_2[] = "__name__"; +static const char __pyx_k_pickle[] = "pickle"; +static const char __pyx_k_reduce[] = "__reduce__"; +static const char __pyx_k_struct[] = "struct"; +static const char __pyx_k_unpack[] = "unpack"; +static const char __pyx_k_update[] = "update"; +static const char __pyx_k_fortran[] = "fortran"; +static const char __pyx_k_memview[] = "memview"; +static const char __pyx_k_Ellipsis[] = "Ellipsis"; +static const char __pyx_k_getstate[] = "__getstate__"; +static const char __pyx_k_itemsize[] = "itemsize"; +static const char __pyx_k_pyx_type[] = "__pyx_type"; +static const char __pyx_k_setstate[] = "__setstate__"; +static const char __pyx_k_TypeError[] = "TypeError"; +static const char __pyx_k_enumerate[] = "enumerate"; +static const char __pyx_k_pyx_state[] = "__pyx_state"; +static const char __pyx_k_reduce_ex[] = "__reduce_ex__"; +static const char __pyx_k_IndexError[] = "IndexError"; +static const char __pyx_k_ValueError[] = "ValueError"; +static const char __pyx_k_pyx_result[] = "__pyx_result"; +static const char __pyx_k_pyx_vtable[] = "__pyx_vtable__"; +static const char __pyx_k_ImportError[] = "ImportError"; +static const char __pyx_k_MemoryError[] = "MemoryError"; +static const char __pyx_k_PickleError[] = "PickleError"; +static const char __pyx_k_RuntimeError[] = "RuntimeError"; +static const char __pyx_k_pyx_checksum[] = "__pyx_checksum"; +static const char __pyx_k_stringsource[] = "stringsource"; +static const char __pyx_k_grad_X_cython[] = "grad_X_cython"; +static const char __pyx_k_pyx_getbuffer[] = "__pyx_getbuffer"; +static const char __pyx_k_reduce_cython[] = "__reduce_cython__"; +static const char __pyx_k_View_MemoryView[] = "View.MemoryView"; +static const char __pyx_k_allocate_buffer[] = "allocate_buffer"; +static const char __pyx_k_dtype_is_object[] = "dtype_is_object"; +static const char __pyx_k_pyx_PickleError[] = "__pyx_PickleError"; +static const char __pyx_k_setstate_cython[] = "__setstate_cython__"; +static const char __pyx_k_lengthscale_grads[] = "lengthscale_grads"; +static const char __pyx_k_pyx_unpickle_Enum[] = "__pyx_unpickle_Enum"; +static const char __pyx_k_cline_in_traceback[] = "cline_in_traceback"; +static const char __pyx_k_strided_and_direct[] = ""; +static const char __pyx_k_strided_and_indirect[] = ""; +static const char __pyx_k_contiguous_and_direct[] = ""; +static const char __pyx_k_MemoryView_of_r_object[] = ""; +static const char __pyx_k_lengthscale_grads_in_c[] = "lengthscale_grads_in_c"; +static const char __pyx_k_MemoryView_of_r_at_0x_x[] = ""; +static const char __pyx_k_contiguous_and_indirect[] = ""; +static const char __pyx_k_Cannot_index_with_type_s[] = "Cannot index with type '%s'"; +static const char __pyx_k_Invalid_shape_in_axis_d_d[] = "Invalid shape in axis %d: %d."; +static const char __pyx_k_itemsize_0_for_cython_array[] = "itemsize <= 0 for cython.array"; +static const char __pyx_k_ndarray_is_not_C_contiguous[] = "ndarray is not C contiguous"; +static const char __pyx_k_unable_to_allocate_array_data[] = "unable to allocate array data."; +static const char __pyx_k_GPy_kern_src_stationary_cython[] = "GPy.kern.src.stationary_cython"; +static const char __pyx_k_strided_and_direct_or_indirect[] = ""; +static const char __pyx_k_numpy_core_multiarray_failed_to[] = "numpy.core.multiarray failed to import"; +static const char __pyx_k_unknown_dtype_code_in_numpy_pxd[] = "unknown dtype code in numpy.pxd (%d)"; +static const char __pyx_k_Buffer_view_does_not_expose_stri[] = "Buffer view does not expose strides"; +static const char __pyx_k_Can_only_create_a_buffer_that_is[] = "Can only create a buffer that is contiguous in memory."; +static const char __pyx_k_Cannot_assign_to_read_only_memor[] = "Cannot assign to read-only memoryview"; +static const char __pyx_k_Cannot_create_writable_memory_vi[] = "Cannot create writable memory view from read-only memoryview"; +static const char __pyx_k_Empty_shape_tuple_for_cython_arr[] = "Empty shape tuple for cython.array"; +static const char __pyx_k_Format_string_allocated_too_shor[] = "Format string allocated too short, see comment in numpy.pxd"; +static const char __pyx_k_GPy_kern_src_stationary_cython_p[] = "GPy/kern/src/stationary_cython.pyx"; +static const char __pyx_k_Incompatible_checksums_s_vs_0xb0[] = "Incompatible checksums (%s vs 0xb068931 = (name))"; +static const char __pyx_k_Indirect_dimensions_not_supporte[] = "Indirect dimensions not supported"; +static const char __pyx_k_Invalid_mode_expected_c_or_fortr[] = "Invalid mode, expected 'c' or 'fortran', got %s"; +static const char __pyx_k_Non_native_byte_order_not_suppor[] = "Non-native byte order not supported"; +static const char __pyx_k_Out_of_bounds_on_buffer_access_a[] = "Out of bounds on buffer access (axis %d)"; +static const char __pyx_k_Unable_to_convert_item_to_object[] = "Unable to convert item to object"; +static const char __pyx_k_got_differing_extents_in_dimensi[] = "got differing extents in dimension %d (got %d and %d)"; +static const char __pyx_k_ndarray_is_not_Fortran_contiguou[] = "ndarray is not Fortran contiguous"; +static const char __pyx_k_no_default___reduce___due_to_non[] = "no default __reduce__ due to non-trivial __cinit__"; +static const char __pyx_k_numpy_core_umath_failed_to_impor[] = "numpy.core.umath failed to import"; +static const char __pyx_k_unable_to_allocate_shape_and_str[] = "unable to allocate shape and strides."; +static const char __pyx_k_Format_string_allocated_too_shor_2[] = "Format string allocated too short."; static PyObject *__pyx_n_s_ASCII; static PyObject *__pyx_kp_s_Buffer_view_does_not_expose_stri; static PyObject *__pyx_kp_s_Can_only_create_a_buffer_that_is; +static PyObject *__pyx_kp_s_Cannot_assign_to_read_only_memor; +static PyObject *__pyx_kp_s_Cannot_create_writable_memory_vi; static PyObject *__pyx_kp_s_Cannot_index_with_type_s; static PyObject *__pyx_n_s_D; static PyObject *__pyx_n_s_Ellipsis; static PyObject *__pyx_kp_s_Empty_shape_tuple_for_cython_arr; static PyObject *__pyx_kp_u_Format_string_allocated_too_shor; static PyObject *__pyx_kp_u_Format_string_allocated_too_shor_2; -static PyObject *__pyx_n_s_GPy_kern__src_stationary_cython; +static PyObject *__pyx_n_s_GPy_kern_src_stationary_cython; +static PyObject *__pyx_kp_s_GPy_kern_src_stationary_cython_p; +static PyObject *__pyx_n_s_ImportError; +static PyObject *__pyx_kp_s_Incompatible_checksums_s_vs_0xb0; static PyObject *__pyx_n_s_IndexError; static PyObject *__pyx_kp_s_Indirect_dimensions_not_supporte; static PyObject *__pyx_kp_s_Invalid_mode_expected_c_or_fortr; @@ -1673,12 +2322,13 @@ static PyObject *__pyx_n_s_N; static PyObject *__pyx_kp_u_Non_native_byte_order_not_suppor; static PyObject *__pyx_n_b_O; static PyObject *__pyx_kp_s_Out_of_bounds_on_buffer_access_a; +static PyObject *__pyx_n_s_PickleError; static PyObject *__pyx_n_s_Q; static PyObject *__pyx_n_s_RuntimeError; static PyObject *__pyx_n_s_TypeError; static PyObject *__pyx_kp_s_Unable_to_convert_item_to_object; -static PyObject *__pyx_kp_s_Users_james_work_GPy_GPy_kern; static PyObject *__pyx_n_s_ValueError; +static PyObject *__pyx_n_s_View_MemoryView; static PyObject *__pyx_n_s_X; static PyObject *__pyx_n_s_X2; static PyObject *__pyx_n_s_X2_2; @@ -1688,9 +2338,11 @@ static PyObject *__pyx_n_s_base; static PyObject *__pyx_n_s_c; static PyObject *__pyx_n_u_c; static PyObject *__pyx_n_s_class; +static PyObject *__pyx_n_s_cline_in_traceback; static PyObject *__pyx_kp_s_contiguous_and_direct; static PyObject *__pyx_kp_s_contiguous_and_indirect; static PyObject *__pyx_n_s_d; +static PyObject *__pyx_n_s_dict; static PyObject *__pyx_n_s_dist; static PyObject *__pyx_n_s_dtype_is_object; static PyObject *__pyx_n_s_encode; @@ -1700,6 +2352,7 @@ static PyObject *__pyx_n_s_flags; static PyObject *__pyx_n_s_format; static PyObject *__pyx_n_s_fortran; static PyObject *__pyx_n_u_fortran; +static PyObject *__pyx_n_s_getstate; static PyObject *__pyx_kp_s_got_differing_extents_in_dimensi; static PyObject *__pyx_n_s_grad; static PyObject *__pyx_n_s_grad_2; @@ -1723,14 +2376,30 @@ static PyObject *__pyx_n_s_nd; static PyObject *__pyx_kp_u_ndarray_is_not_C_contiguous; static PyObject *__pyx_kp_u_ndarray_is_not_Fortran_contiguou; static PyObject *__pyx_n_s_ndim; +static PyObject *__pyx_n_s_new; +static PyObject *__pyx_kp_s_no_default___reduce___due_to_non; static PyObject *__pyx_n_s_np; static PyObject *__pyx_n_s_numpy; +static PyObject *__pyx_kp_s_numpy_core_multiarray_failed_to; +static PyObject *__pyx_kp_s_numpy_core_umath_failed_to_impor; static PyObject *__pyx_n_s_obj; static PyObject *__pyx_n_s_pack; +static PyObject *__pyx_n_s_pickle; +static PyObject *__pyx_n_s_pyx_PickleError; +static PyObject *__pyx_n_s_pyx_checksum; static PyObject *__pyx_n_s_pyx_getbuffer; +static PyObject *__pyx_n_s_pyx_result; +static PyObject *__pyx_n_s_pyx_state; +static PyObject *__pyx_n_s_pyx_type; +static PyObject *__pyx_n_s_pyx_unpickle_Enum; static PyObject *__pyx_n_s_pyx_vtable; static PyObject *__pyx_n_s_q; static PyObject *__pyx_n_s_range; +static PyObject *__pyx_n_s_reduce; +static PyObject *__pyx_n_s_reduce_cython; +static PyObject *__pyx_n_s_reduce_ex; +static PyObject *__pyx_n_s_setstate; +static PyObject *__pyx_n_s_setstate_cython; static PyObject *__pyx_n_s_shape; static PyObject *__pyx_n_s_size; static PyObject *__pyx_n_s_start; @@ -1739,6 +2408,7 @@ static PyObject *__pyx_n_s_stop; static PyObject *__pyx_kp_s_strided_and_direct; static PyObject *__pyx_kp_s_strided_and_direct_or_indirect; static PyObject *__pyx_kp_s_strided_and_indirect; +static PyObject *__pyx_kp_s_stringsource; static PyObject *__pyx_n_s_struct; static PyObject *__pyx_n_s_test; static PyObject *__pyx_n_s_tmp; @@ -1747,21 +2417,27 @@ static PyObject *__pyx_kp_s_unable_to_allocate_array_data; static PyObject *__pyx_kp_s_unable_to_allocate_shape_and_str; static PyObject *__pyx_kp_u_unknown_dtype_code_in_numpy_pxd; static PyObject *__pyx_n_s_unpack; -static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_grad_X(CYTHON_UNUSED PyObject *__pyx_self, int __pyx_v_N, int __pyx_v_D, int __pyx_v_M, PyArrayObject *__pyx_v__X, PyArrayObject *__pyx_v__X2, PyArrayObject *__pyx_v__tmp, PyArrayObject *__pyx_v__grad); /* proto */ -static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_2grad_X_cython(CYTHON_UNUSED PyObject *__pyx_self, CYTHON_UNUSED int __pyx_v_N, int __pyx_v_D, int __pyx_v_M, __Pyx_memviewslice __pyx_v_X, __Pyx_memviewslice __pyx_v_X2, __Pyx_memviewslice __pyx_v_tmp, __Pyx_memviewslice __pyx_v_grad); /* proto */ -static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_4lengthscale_grads_in_c(CYTHON_UNUSED PyObject *__pyx_self, int __pyx_v_N, int __pyx_v_M, int __pyx_v_Q, PyArrayObject *__pyx_v__tmp, PyArrayObject *__pyx_v__X, PyArrayObject *__pyx_v__X2, PyArrayObject *__pyx_v__grad); /* proto */ -static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_6lengthscale_grads(CYTHON_UNUSED PyObject *__pyx_self, int __pyx_v_N, int __pyx_v_M, int __pyx_v_Q, __Pyx_memviewslice __pyx_v_tmp, __Pyx_memviewslice __pyx_v_X, __Pyx_memviewslice __pyx_v_X2, __Pyx_memviewslice __pyx_v_grad); /* proto */ +static PyObject *__pyx_n_s_update; +static PyObject *__pyx_pf_3GPy_4kern_3src_17stationary_cython_grad_X(CYTHON_UNUSED PyObject *__pyx_self, int __pyx_v_N, int __pyx_v_D, int __pyx_v_M, PyArrayObject *__pyx_v__X, PyArrayObject *__pyx_v__X2, PyArrayObject *__pyx_v__tmp, PyArrayObject *__pyx_v__grad); /* proto */ +static PyObject *__pyx_pf_3GPy_4kern_3src_17stationary_cython_2grad_X_cython(CYTHON_UNUSED PyObject *__pyx_self, CYTHON_UNUSED int __pyx_v_N, int __pyx_v_D, int __pyx_v_M, __Pyx_memviewslice __pyx_v_X, __Pyx_memviewslice __pyx_v_X2, __Pyx_memviewslice __pyx_v_tmp, __Pyx_memviewslice __pyx_v_grad); /* proto */ +static PyObject *__pyx_pf_3GPy_4kern_3src_17stationary_cython_4lengthscale_grads_in_c(CYTHON_UNUSED PyObject *__pyx_self, int __pyx_v_N, int __pyx_v_M, int __pyx_v_Q, PyArrayObject *__pyx_v__tmp, PyArrayObject *__pyx_v__X, PyArrayObject *__pyx_v__X2, PyArrayObject *__pyx_v__grad); /* proto */ +static PyObject *__pyx_pf_3GPy_4kern_3src_17stationary_cython_6lengthscale_grads(CYTHON_UNUSED PyObject *__pyx_self, int __pyx_v_N, int __pyx_v_M, int __pyx_v_Q, __Pyx_memviewslice __pyx_v_tmp, __Pyx_memviewslice __pyx_v_X, __Pyx_memviewslice __pyx_v_X2, __Pyx_memviewslice __pyx_v_grad); /* proto */ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, Py_buffer *__pyx_v_info, int __pyx_v_flags); /* proto */ static void __pyx_pf_5numpy_7ndarray_2__releasebuffer__(PyArrayObject *__pyx_v_self, Py_buffer *__pyx_v_info); /* proto */ static int __pyx_array___pyx_pf_15View_dot_MemoryView_5array___cinit__(struct __pyx_array_obj *__pyx_v_self, PyObject *__pyx_v_shape, Py_ssize_t __pyx_v_itemsize, PyObject *__pyx_v_format, PyObject *__pyx_v_mode, int __pyx_v_allocate_buffer); /* proto */ static int __pyx_array___pyx_pf_15View_dot_MemoryView_5array_2__getbuffer__(struct __pyx_array_obj *__pyx_v_self, Py_buffer *__pyx_v_info, int __pyx_v_flags); /* proto */ static void __pyx_array___pyx_pf_15View_dot_MemoryView_5array_4__dealloc__(struct __pyx_array_obj *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_15View_dot_MemoryView_5array_7memview___get__(struct __pyx_array_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_array___pyx_pf_15View_dot_MemoryView_5array_6__getattr__(struct __pyx_array_obj *__pyx_v_self, PyObject *__pyx_v_attr); /* proto */ -static PyObject *__pyx_array___pyx_pf_15View_dot_MemoryView_5array_8__getitem__(struct __pyx_array_obj *__pyx_v_self, PyObject *__pyx_v_item); /* proto */ -static int __pyx_array___pyx_pf_15View_dot_MemoryView_5array_10__setitem__(struct __pyx_array_obj *__pyx_v_self, PyObject *__pyx_v_item, PyObject *__pyx_v_value); /* proto */ +static Py_ssize_t __pyx_array___pyx_pf_15View_dot_MemoryView_5array_6__len__(struct __pyx_array_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_array___pyx_pf_15View_dot_MemoryView_5array_8__getattr__(struct __pyx_array_obj *__pyx_v_self, PyObject *__pyx_v_attr); /* proto */ +static PyObject *__pyx_array___pyx_pf_15View_dot_MemoryView_5array_10__getitem__(struct __pyx_array_obj *__pyx_v_self, PyObject *__pyx_v_item); /* proto */ +static int __pyx_array___pyx_pf_15View_dot_MemoryView_5array_12__setitem__(struct __pyx_array_obj *__pyx_v_self, PyObject *__pyx_v_item, PyObject *__pyx_v_value); /* proto */ +static PyObject *__pyx_pf___pyx_array___reduce_cython__(CYTHON_UNUSED struct __pyx_array_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf___pyx_array_2__setstate_cython__(CYTHON_UNUSED struct __pyx_array_obj *__pyx_v_self, CYTHON_UNUSED PyObject *__pyx_v___pyx_state); /* proto */ static int __pyx_MemviewEnum___pyx_pf_15View_dot_MemoryView_4Enum___init__(struct __pyx_MemviewEnum_obj *__pyx_v_self, PyObject *__pyx_v_name); /* proto */ static PyObject *__pyx_MemviewEnum___pyx_pf_15View_dot_MemoryView_4Enum_2__repr__(struct __pyx_MemviewEnum_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf___pyx_MemviewEnum___reduce_cython__(struct __pyx_MemviewEnum_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf___pyx_MemviewEnum_2__setstate_cython__(struct __pyx_MemviewEnum_obj *__pyx_v_self, PyObject *__pyx_v___pyx_state); /* proto */ static int __pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview___cinit__(struct __pyx_memoryview_obj *__pyx_v_self, PyObject *__pyx_v_obj, int __pyx_v_flags, int __pyx_v_dtype_is_object); /* proto */ static void __pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview_2__dealloc__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ static PyObject *__pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview_4__getitem__(struct __pyx_memoryview_obj *__pyx_v_self, PyObject *__pyx_v_index); /* proto */ @@ -1783,14 +2459,20 @@ static PyObject *__pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview_16 static PyObject *__pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview_18is_f_contig(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ static PyObject *__pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview_20copy(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ static PyObject *__pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview_22copy_fortran(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf___pyx_memoryview___reduce_cython__(CYTHON_UNUSED struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf___pyx_memoryview_2__setstate_cython__(CYTHON_UNUSED struct __pyx_memoryview_obj *__pyx_v_self, CYTHON_UNUSED PyObject *__pyx_v___pyx_state); /* proto */ static void __pyx_memoryviewslice___pyx_pf_15View_dot_MemoryView_16_memoryviewslice___dealloc__(struct __pyx_memoryviewslice_obj *__pyx_v_self); /* proto */ static PyObject *__pyx_pf_15View_dot_MemoryView_16_memoryviewslice_4base___get__(struct __pyx_memoryviewslice_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf___pyx_memoryviewslice___reduce_cython__(CYTHON_UNUSED struct __pyx_memoryviewslice_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf___pyx_memoryviewslice_2__setstate_cython__(CYTHON_UNUSED struct __pyx_memoryviewslice_obj *__pyx_v_self, CYTHON_UNUSED PyObject *__pyx_v___pyx_state); /* proto */ +static PyObject *__pyx_pf_15View_dot_MemoryView___pyx_unpickle_Enum(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v___pyx_type, long __pyx_v___pyx_checksum, PyObject *__pyx_v___pyx_state); /* proto */ static PyObject *__pyx_tp_new_array(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_Enum(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new_memoryview(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_tp_new__memoryviewslice(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_int_0; static PyObject *__pyx_int_1; +static PyObject *__pyx_int_184977713; static PyObject *__pyx_int_neg_1; static PyObject *__pyx_tuple_; static PyObject *__pyx_tuple__2; @@ -1801,31 +2483,40 @@ static PyObject *__pyx_tuple__6; static PyObject *__pyx_tuple__7; static PyObject *__pyx_tuple__8; static PyObject *__pyx_tuple__9; -static PyObject *__pyx_slice__16; -static PyObject *__pyx_slice__17; -static PyObject *__pyx_slice__18; +static PyObject *__pyx_slice__22; static PyObject *__pyx_tuple__10; static PyObject *__pyx_tuple__11; static PyObject *__pyx_tuple__12; static PyObject *__pyx_tuple__13; static PyObject *__pyx_tuple__14; static PyObject *__pyx_tuple__15; +static PyObject *__pyx_tuple__16; +static PyObject *__pyx_tuple__17; +static PyObject *__pyx_tuple__18; static PyObject *__pyx_tuple__19; static PyObject *__pyx_tuple__20; -static PyObject *__pyx_tuple__22; +static PyObject *__pyx_tuple__21; +static PyObject *__pyx_tuple__23; static PyObject *__pyx_tuple__24; +static PyObject *__pyx_tuple__25; static PyObject *__pyx_tuple__26; static PyObject *__pyx_tuple__28; -static PyObject *__pyx_tuple__29; static PyObject *__pyx_tuple__30; -static PyObject *__pyx_tuple__31; static PyObject *__pyx_tuple__32; -static PyObject *__pyx_codeobj__21; -static PyObject *__pyx_codeobj__23; -static PyObject *__pyx_codeobj__25; +static PyObject *__pyx_tuple__34; +static PyObject *__pyx_tuple__35; +static PyObject *__pyx_tuple__36; +static PyObject *__pyx_tuple__37; +static PyObject *__pyx_tuple__38; +static PyObject *__pyx_tuple__39; static PyObject *__pyx_codeobj__27; +static PyObject *__pyx_codeobj__29; +static PyObject *__pyx_codeobj__31; +static PyObject *__pyx_codeobj__33; +static PyObject *__pyx_codeobj__40; +/* Late includes */ -/* "GPy/kern/_src/stationary_cython.pyx":17 +/* "GPy/kern/src/stationary_cython.pyx":19 * void _lengthscale_grads "_lengthscale_grads" (int N, int M, int Q, double* tmp, double* X, double* X2, double* grad) nogil * * def grad_X(int N, int D, int M, # <<<<<<<<<<<<<< @@ -1834,9 +2525,9 @@ static PyObject *__pyx_codeobj__27; */ /* Python wrapper */ -static PyObject *__pyx_pw_3GPy_4kern_4_src_17stationary_cython_1grad_X(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds); /*proto*/ -static PyMethodDef __pyx_mdef_3GPy_4kern_4_src_17stationary_cython_1grad_X = {"grad_X", (PyCFunction)__pyx_pw_3GPy_4kern_4_src_17stationary_cython_1grad_X, METH_VARARGS|METH_KEYWORDS, 0}; -static PyObject *__pyx_pw_3GPy_4kern_4_src_17stationary_cython_1grad_X(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds) { +static PyObject *__pyx_pw_3GPy_4kern_3src_17stationary_cython_1grad_X(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds); /*proto*/ +static PyMethodDef __pyx_mdef_3GPy_4kern_3src_17stationary_cython_1grad_X = {"grad_X", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_4kern_3src_17stationary_cython_1grad_X, METH_VARARGS|METH_KEYWORDS, 0}; +static PyObject *__pyx_pw_3GPy_4kern_3src_17stationary_cython_1grad_X(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds) { int __pyx_v_N; int __pyx_v_D; int __pyx_v_M; @@ -1844,9 +2535,6 @@ static PyObject *__pyx_pw_3GPy_4kern_4_src_17stationary_cython_1grad_X(PyObject PyArrayObject *__pyx_v__X2 = 0; PyArrayObject *__pyx_v__tmp = 0; PyArrayObject *__pyx_v__grad = 0; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; PyObject *__pyx_r = 0; __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("grad_X (wrapper)", 0); @@ -1858,53 +2546,66 @@ static PyObject *__pyx_pw_3GPy_4kern_4_src_17stationary_cython_1grad_X(PyObject const Py_ssize_t pos_args = PyTuple_GET_SIZE(__pyx_args); switch (pos_args) { case 7: values[6] = PyTuple_GET_ITEM(__pyx_args, 6); + CYTHON_FALLTHROUGH; case 6: values[5] = PyTuple_GET_ITEM(__pyx_args, 5); + CYTHON_FALLTHROUGH; case 5: values[4] = PyTuple_GET_ITEM(__pyx_args, 4); + CYTHON_FALLTHROUGH; case 4: values[3] = PyTuple_GET_ITEM(__pyx_args, 3); + CYTHON_FALLTHROUGH; case 3: values[2] = PyTuple_GET_ITEM(__pyx_args, 2); + CYTHON_FALLTHROUGH; case 2: values[1] = PyTuple_GET_ITEM(__pyx_args, 1); + CYTHON_FALLTHROUGH; case 1: values[0] = PyTuple_GET_ITEM(__pyx_args, 0); + CYTHON_FALLTHROUGH; case 0: break; default: goto __pyx_L5_argtuple_error; } kw_args = PyDict_Size(__pyx_kwds); switch (pos_args) { case 0: - if (likely((values[0] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_N)) != 0)) kw_args--; + if (likely((values[0] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_N)) != 0)) kw_args--; else goto __pyx_L5_argtuple_error; + CYTHON_FALLTHROUGH; case 1: - if (likely((values[1] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_D)) != 0)) kw_args--; + if (likely((values[1] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_D)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("grad_X", 1, 7, 7, 1); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 17; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("grad_X", 1, 7, 7, 1); __PYX_ERR(0, 19, __pyx_L3_error) } + CYTHON_FALLTHROUGH; case 2: - if (likely((values[2] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_M)) != 0)) kw_args--; + if (likely((values[2] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_M)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("grad_X", 1, 7, 7, 2); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 17; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("grad_X", 1, 7, 7, 2); __PYX_ERR(0, 19, __pyx_L3_error) } + CYTHON_FALLTHROUGH; case 3: - if (likely((values[3] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_X)) != 0)) kw_args--; + if (likely((values[3] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_X)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("grad_X", 1, 7, 7, 3); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 17; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("grad_X", 1, 7, 7, 3); __PYX_ERR(0, 19, __pyx_L3_error) } + CYTHON_FALLTHROUGH; case 4: - if (likely((values[4] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_X2)) != 0)) kw_args--; + if (likely((values[4] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_X2)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("grad_X", 1, 7, 7, 4); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 17; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("grad_X", 1, 7, 7, 4); __PYX_ERR(0, 19, __pyx_L3_error) } + CYTHON_FALLTHROUGH; case 5: - if (likely((values[5] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_tmp)) != 0)) kw_args--; + if (likely((values[5] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_tmp)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("grad_X", 1, 7, 7, 5); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 17; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("grad_X", 1, 7, 7, 5); __PYX_ERR(0, 19, __pyx_L3_error) } + CYTHON_FALLTHROUGH; case 6: - if (likely((values[6] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_grad)) != 0)) kw_args--; + if (likely((values[6] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_grad)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("grad_X", 1, 7, 7, 6); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 17; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("grad_X", 1, 7, 7, 6); __PYX_ERR(0, 19, __pyx_L3_error) } } if (unlikely(kw_args > 0)) { - if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "grad_X") < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 17; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "grad_X") < 0)) __PYX_ERR(0, 19, __pyx_L3_error) } } else if (PyTuple_GET_SIZE(__pyx_args) != 7) { goto __pyx_L5_argtuple_error; @@ -1917,9 +2618,9 @@ static PyObject *__pyx_pw_3GPy_4kern_4_src_17stationary_cython_1grad_X(PyObject values[5] = PyTuple_GET_ITEM(__pyx_args, 5); values[6] = PyTuple_GET_ITEM(__pyx_args, 6); } - __pyx_v_N = __Pyx_PyInt_As_int(values[0]); if (unlikely((__pyx_v_N == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 17; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_D = __Pyx_PyInt_As_int(values[1]); if (unlikely((__pyx_v_D == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 17; __pyx_clineno = __LINE__; goto __pyx_L3_error;} - __pyx_v_M = __Pyx_PyInt_As_int(values[2]); if (unlikely((__pyx_v_M == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 17; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_N = __Pyx_PyInt_As_int(values[0]); if (unlikely((__pyx_v_N == (int)-1) && PyErr_Occurred())) __PYX_ERR(0, 19, __pyx_L3_error) + __pyx_v_D = __Pyx_PyInt_As_int(values[1]); if (unlikely((__pyx_v_D == (int)-1) && PyErr_Occurred())) __PYX_ERR(0, 19, __pyx_L3_error) + __pyx_v_M = __Pyx_PyInt_As_int(values[2]); 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/* function exit code */ goto __pyx_L0; @@ -1948,7 +2649,7 @@ static PyObject *__pyx_pw_3GPy_4kern_4_src_17stationary_cython_1grad_X(PyObject return __pyx_r; } -static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_grad_X(CYTHON_UNUSED PyObject *__pyx_self, int __pyx_v_N, int __pyx_v_D, int __pyx_v_M, PyArrayObject *__pyx_v__X, PyArrayObject *__pyx_v__X2, PyArrayObject *__pyx_v__tmp, PyArrayObject *__pyx_v__grad) { +static PyObject *__pyx_pf_3GPy_4kern_3src_17stationary_cython_grad_X(CYTHON_UNUSED PyObject *__pyx_self, int __pyx_v_N, int __pyx_v_D, int __pyx_v_M, PyArrayObject *__pyx_v__X, PyArrayObject *__pyx_v__X2, PyArrayObject *__pyx_v__tmp, PyArrayObject *__pyx_v__grad) { double *__pyx_v_X; double *__pyx_v_X2; double *__pyx_v_tmp; @@ -1963,9 +2664,6 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_grad_X(CYTHON_UNU __Pyx_Buffer __pyx_pybuffer__tmp; PyObject *__pyx_r = NULL; __Pyx_RefNannyDeclarations - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; 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__pyx_pybuffernd__grad.diminfo[0].shape = __pyx_pybuffernd__grad.rcbuffer->pybuffer.shape[0]; __pyx_pybuffernd__grad.diminfo[1].strides = __pyx_pybuffernd__grad.rcbuffer->pybuffer.strides[1]; __pyx_pybuffernd__grad.diminfo[1].shape = __pyx_pybuffernd__grad.rcbuffer->pybuffer.shape[1]; - /* "GPy/kern/_src/stationary_cython.pyx":22 + /* "GPy/kern/src/stationary_cython.pyx":24 * np.ndarray[DTYPE_t, ndim=2] _tmp, * np.ndarray[DTYPE_t, ndim=2] _grad): * cdef double *X = _X.data # <<<<<<<<<<<<<< @@ -2013,7 +2711,7 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_grad_X(CYTHON_UNU */ __pyx_v_X = ((double *)__pyx_v__X->data); - /* "GPy/kern/_src/stationary_cython.pyx":23 + /* "GPy/kern/src/stationary_cython.pyx":25 * np.ndarray[DTYPE_t, ndim=2] _grad): * cdef double *X = _X.data * cdef double *X2 = _X2.data # <<<<<<<<<<<<<< @@ -2022,7 +2720,7 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_grad_X(CYTHON_UNU */ __pyx_v_X2 = ((double *)__pyx_v__X2->data); - /* "GPy/kern/_src/stationary_cython.pyx":24 + /* "GPy/kern/src/stationary_cython.pyx":26 * cdef double *X = _X.data * cdef double *X2 = _X2.data * cdef double *tmp = _tmp.data # <<<<<<<<<<<<<< @@ -2031,7 +2729,7 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_grad_X(CYTHON_UNU */ __pyx_v_tmp = ((double *)__pyx_v__tmp->data); - /* "GPy/kern/_src/stationary_cython.pyx":25 + /* "GPy/kern/src/stationary_cython.pyx":27 * cdef double *X2 = _X2.data * cdef double *tmp = _tmp.data * cdef double *grad = _grad.data # <<<<<<<<<<<<<< @@ -2040,7 +2738,7 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_grad_X(CYTHON_UNU */ __pyx_v_grad = ((double *)__pyx_v__grad->data); - /* "GPy/kern/_src/stationary_cython.pyx":26 + /* "GPy/kern/src/stationary_cython.pyx":28 * cdef double *tmp = _tmp.data * cdef double *grad = _grad.data * with nogil: # <<<<<<<<<<<<<< @@ -2051,10 +2749,11 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_grad_X(CYTHON_UNU #ifdef WITH_THREAD PyThreadState *_save; Py_UNBLOCK_THREADS + __Pyx_FastGIL_Remember(); #endif /*try:*/ { - /* "GPy/kern/_src/stationary_cython.pyx":27 + /* "GPy/kern/src/stationary_cython.pyx":29 * cdef double *grad = _grad.data * with nogil: * _grad_X(N, D, M, X, X2, tmp, grad) # return nothing, work in place. # <<<<<<<<<<<<<< @@ -2064,7 +2763,7 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_grad_X(CYTHON_UNU _grad_X(__pyx_v_N, __pyx_v_D, __pyx_v_M, __pyx_v_X, __pyx_v_X2, __pyx_v_tmp, __pyx_v_grad); } - /* "GPy/kern/_src/stationary_cython.pyx":26 + /* "GPy/kern/src/stationary_cython.pyx":28 * cdef double *tmp = _tmp.data * cdef double *grad = _grad.data * with nogil: # <<<<<<<<<<<<<< @@ -2074,6 +2773,7 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_grad_X(CYTHON_UNU /*finally:*/ { /*normal exit:*/{ #ifdef WITH_THREAD + __Pyx_FastGIL_Forget(); Py_BLOCK_THREADS #endif goto __pyx_L5; @@ -2082,7 +2782,7 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_grad_X(CYTHON_UNU } } - /* "GPy/kern/_src/stationary_cython.pyx":17 + /* "GPy/kern/src/stationary_cython.pyx":19 * void _lengthscale_grads "_lengthscale_grads" (int N, int M, int Q, double* tmp, double* X, double* X2, double* grad) nogil * * def grad_X(int N, int D, int M, # <<<<<<<<<<<<<< @@ -2095,13 +2795,15 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_grad_X(CYTHON_UNU goto __pyx_L0; __pyx_L1_error:; { PyObject *__pyx_type, *__pyx_value, *__pyx_tb; + __Pyx_PyThreadState_declare + __Pyx_PyThreadState_assign __Pyx_ErrFetch(&__pyx_type, &__pyx_value, &__pyx_tb); 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+ CYTHON_FALLTHROUGH; case 0: break; default: goto __pyx_L5_argtuple_error; } kw_args = PyDict_Size(__pyx_kwds); switch (pos_args) { case 0: - if (likely((values[0] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_N)) != 0)) kw_args--; + if (likely((values[0] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_N)) != 0)) kw_args--; else goto __pyx_L5_argtuple_error; + CYTHON_FALLTHROUGH; case 1: - if (likely((values[1] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_D)) != 0)) kw_args--; + if (likely((values[1] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_D)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("grad_X_cython", 1, 7, 7, 1); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 30; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("grad_X_cython", 1, 7, 7, 1); __PYX_ERR(0, 32, __pyx_L3_error) } + CYTHON_FALLTHROUGH; case 2: - if (likely((values[2] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_M)) != 0)) kw_args--; + if (likely((values[2] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_M)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("grad_X_cython", 1, 7, 7, 2); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 30; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("grad_X_cython", 1, 7, 7, 2); __PYX_ERR(0, 32, __pyx_L3_error) } + CYTHON_FALLTHROUGH; case 3: - if (likely((values[3] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_X_2)) != 0)) kw_args--; + if (likely((values[3] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_X_2)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("grad_X_cython", 1, 7, 7, 3); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 30; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("grad_X_cython", 1, 7, 7, 3); __PYX_ERR(0, 32, __pyx_L3_error) } + CYTHON_FALLTHROUGH; case 4: - if (likely((values[4] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_X2_2)) != 0)) kw_args--; + if (likely((values[4] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_X2_2)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("grad_X_cython", 1, 7, 7, 4); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 30; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("grad_X_cython", 1, 7, 7, 4); __PYX_ERR(0, 32, __pyx_L3_error) } + CYTHON_FALLTHROUGH; case 5: - if (likely((values[5] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_tmp_2)) != 0)) kw_args--; + if (likely((values[5] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_tmp_2)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("grad_X_cython", 1, 7, 7, 5); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 30; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("grad_X_cython", 1, 7, 7, 5); __PYX_ERR(0, 32, __pyx_L3_error) } + CYTHON_FALLTHROUGH; case 6: - if (likely((values[6] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_grad_2)) != 0)) kw_args--; + if (likely((values[6] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_grad_2)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("grad_X_cython", 1, 7, 7, 6); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 30; __pyx_clineno = __LINE__; 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/* function exit code */ __Pyx_RefNannyFinishContext(); return __pyx_r; } -static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_2grad_X_cython(CYTHON_UNUSED PyObject *__pyx_self, CYTHON_UNUSED int __pyx_v_N, int __pyx_v_D, int __pyx_v_M, __Pyx_memviewslice __pyx_v_X, __Pyx_memviewslice __pyx_v_X2, __Pyx_memviewslice __pyx_v_tmp, __Pyx_memviewslice __pyx_v_grad) { +static PyObject *__pyx_pf_3GPy_4kern_3src_17stationary_cython_2grad_X_cython(CYTHON_UNUSED PyObject *__pyx_self, CYTHON_UNUSED int __pyx_v_N, int __pyx_v_D, int __pyx_v_M, __Pyx_memviewslice __pyx_v_X, __Pyx_memviewslice __pyx_v_X2, __Pyx_memviewslice __pyx_v_tmp, __Pyx_memviewslice __pyx_v_grad) { int __pyx_v_n; int __pyx_v_d; int __pyx_v_nd; @@ -2244,7 +2956,7 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_2grad_X_cython(CY Py_ssize_t __pyx_t_5; int __pyx_t_6; int __pyx_t_7; - Py_ssize_t __pyx_t_8; + int __pyx_t_8; Py_ssize_t __pyx_t_9; Py_ssize_t __pyx_t_10; Py_ssize_t __pyx_t_11; @@ -2252,9 +2964,10 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_2grad_X_cython(CY Py_ssize_t __pyx_t_13; Py_ssize_t __pyx_t_14; Py_ssize_t __pyx_t_15; + Py_ssize_t __pyx_t_16; __Pyx_RefNannySetupContext("grad_X_cython", 0); - /* "GPy/kern/_src/stationary_cython.pyx":32 + /* "GPy/kern/src/stationary_cython.pyx":34 * def grad_X_cython(int N, int D, int M, double[:,:] X, double[:,:] X2, double[:,:] tmp, double[:,:] grad): * cdef int n,d,nd,m * for nd in prange(N * D, nogil=True): # <<<<<<<<<<<<<< @@ -2265,6 +2978,7 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_2grad_X_cython(CY #ifdef WITH_THREAD PyThreadState *_save; Py_UNBLOCK_THREADS + __Pyx_FastGIL_Remember(); #endif /*try:*/ { __pyx_t_1 = (__pyx_v_N * __pyx_v_D); @@ -2276,25 +2990,25 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_2grad_X_cython(CY #define likely(x) (x) #define unlikely(x) (x) #endif - __pyx_t_3 = (__pyx_t_1 - 0) / 1; + __pyx_t_3 = (__pyx_t_1 - 0 + 1 - 1/abs(1)) / 1; if (__pyx_t_3 > 0) { #ifdef _OPENMP - #pragma omp parallel private(__pyx_t_12, __pyx_t_5, __pyx_t_14, __pyx_t_4, __pyx_t_10, __pyx_t_7, __pyx_t_9, __pyx_t_8, __pyx_t_15, __pyx_t_11, __pyx_t_13, __pyx_t_6) + #pragma omp parallel private(__pyx_t_10, __pyx_t_11, __pyx_t_12, __pyx_t_13, __pyx_t_14, __pyx_t_15, __pyx_t_16, __pyx_t_4, __pyx_t_5, __pyx_t_6, __pyx_t_7, __pyx_t_8, __pyx_t_9) #endif /* _OPENMP */ { #ifdef _OPENMP - #pragma omp for lastprivate(__pyx_v_n) lastprivate(__pyx_v_m) lastprivate(__pyx_v_d) firstprivate(__pyx_v_nd) lastprivate(__pyx_v_nd) + #pragma omp for lastprivate(__pyx_v_d) lastprivate(__pyx_v_m) lastprivate(__pyx_v_n) firstprivate(__pyx_v_nd) lastprivate(__pyx_v_nd) #endif /* _OPENMP */ for (__pyx_t_2 = 0; __pyx_t_2 < __pyx_t_3; __pyx_t_2++){ { - __pyx_v_nd = 0 + 1 * __pyx_t_2; + __pyx_v_nd = (int)(0 + 1 * __pyx_t_2); /* Initialize private variables to invalid values */ - __pyx_v_n = ((int)0xbad0bad0); - __pyx_v_m = ((int)0xbad0bad0); __pyx_v_d = ((int)0xbad0bad0); + __pyx_v_m = ((int)0xbad0bad0); + __pyx_v_n = ((int)0xbad0bad0); - /* "GPy/kern/_src/stationary_cython.pyx":33 + /* "GPy/kern/src/stationary_cython.pyx":35 * cdef int n,d,nd,m * for nd in prange(N * D, nogil=True): * n = nd / D # <<<<<<<<<<<<<< @@ -2303,7 +3017,7 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_2grad_X_cython(CY */ __pyx_v_n = (__pyx_v_nd / __pyx_v_D); - /* "GPy/kern/_src/stationary_cython.pyx":34 + /* "GPy/kern/src/stationary_cython.pyx":36 * for nd in prange(N * D, nogil=True): * n = nd / D * d = nd % D # <<<<<<<<<<<<<< @@ -2312,7 +3026,7 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_2grad_X_cython(CY */ __pyx_v_d = (__pyx_v_nd % __pyx_v_D); - /* "GPy/kern/_src/stationary_cython.pyx":35 + /* "GPy/kern/src/stationary_cython.pyx":37 * n = nd / D * d = nd % D * grad[n,d] = 0.0 # <<<<<<<<<<<<<< @@ -2323,7 +3037,7 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_2grad_X_cython(CY __pyx_t_5 = __pyx_v_d; 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} } } @@ -2364,7 +3079,7 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_2grad_X_cython(CY #endif } - /* "GPy/kern/_src/stationary_cython.pyx":32 + /* "GPy/kern/src/stationary_cython.pyx":34 * def grad_X_cython(int N, int D, int M, double[:,:] X, double[:,:] X2, double[:,:] tmp, double[:,:] grad): * cdef int n,d,nd,m * for nd in prange(N * D, nogil=True): # <<<<<<<<<<<<<< @@ -2374,6 +3089,7 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_2grad_X_cython(CY /*finally:*/ { /*normal exit:*/{ #ifdef WITH_THREAD + __Pyx_FastGIL_Forget(); Py_BLOCK_THREADS #endif goto __pyx_L5; @@ -2382,7 +3098,7 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_2grad_X_cython(CY } } - /* "GPy/kern/_src/stationary_cython.pyx":30 + /* "GPy/kern/src/stationary_cython.pyx":32 * * @cython.cdivision(True) * def grad_X_cython(int N, int D, int M, double[:,:] X, double[:,:] X2, double[:,:] tmp, double[:,:] grad): # <<<<<<<<<<<<<< @@ -2401,7 +3117,7 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_2grad_X_cython(CY return __pyx_r; 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- /* "GPy/kern/_src/stationary_cython.pyx":47 + /* "GPy/kern/src/stationary_cython.pyx":49 * cdef double *X = _X.data * cdef double *X2 = _X2.data * cdef double *grad = _grad.data # <<<<<<<<<<<<<< @@ -2616,7 +3339,7 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_4lengthscale_grad */ __pyx_v_grad = ((double *)__pyx_v__grad->data); - /* "GPy/kern/_src/stationary_cython.pyx":48 + /* "GPy/kern/src/stationary_cython.pyx":50 * cdef double *X2 = _X2.data * cdef double *grad = _grad.data * with nogil: # <<<<<<<<<<<<<< @@ -2627,10 +3350,11 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_4lengthscale_grad #ifdef WITH_THREAD PyThreadState *_save; Py_UNBLOCK_THREADS + __Pyx_FastGIL_Remember(); #endif /*try:*/ { - /* "GPy/kern/_src/stationary_cython.pyx":49 + /* "GPy/kern/src/stationary_cython.pyx":51 * cdef double *grad = _grad.data * with nogil: * _lengthscale_grads(N, M, Q, tmp, X, X2, grad) # return nothing, work in place. # <<<<<<<<<<<<<< @@ -2640,7 +3364,7 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_4lengthscale_grad _lengthscale_grads(__pyx_v_N, __pyx_v_M, __pyx_v_Q, __pyx_v_tmp, __pyx_v_X, __pyx_v_X2, __pyx_v_grad); } - /* "GPy/kern/_src/stationary_cython.pyx":48 + /* "GPy/kern/src/stationary_cython.pyx":50 * cdef double *X2 = _X2.data * cdef double *grad = _grad.data * with nogil: # <<<<<<<<<<<<<< @@ -2650,6 +3374,7 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_4lengthscale_grad /*finally:*/ { /*normal exit:*/{ #ifdef WITH_THREAD + __Pyx_FastGIL_Forget(); Py_BLOCK_THREADS #endif goto __pyx_L5; @@ -2658,7 +3383,7 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_4lengthscale_grad } } - /* "GPy/kern/_src/stationary_cython.pyx":39 + /* "GPy/kern/src/stationary_cython.pyx":41 * grad[n,d] += tmp[n, m] * (X[n, d] - X2[m, d]) * * def lengthscale_grads_in_c(int N, int M, int Q, # <<<<<<<<<<<<<< @@ -2671,13 +3396,15 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_4lengthscale_grad goto __pyx_L0; __pyx_L1_error:; { PyObject *__pyx_type, *__pyx_value, *__pyx_tb; + __Pyx_PyThreadState_declare + __Pyx_PyThreadState_assign __Pyx_ErrFetch(&__pyx_type, &__pyx_value, &__pyx_tb); 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{__pyx_filename = __pyx_f[0]; __pyx_lineno = 51; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("lengthscale_grads", 1, 7, 7, 4); __PYX_ERR(0, 53, __pyx_L3_error) } + CYTHON_FALLTHROUGH; case 5: - if (likely((values[5] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_X2_2)) != 0)) kw_args--; + if (likely((values[5] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_X2_2)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("lengthscale_grads", 1, 7, 7, 5); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 51; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("lengthscale_grads", 1, 7, 7, 5); __PYX_ERR(0, 53, __pyx_L3_error) } + CYTHON_FALLTHROUGH; case 6: - if (likely((values[6] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_grad_2)) != 0)) kw_args--; + if (likely((values[6] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_grad_2)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("lengthscale_grads", 1, 7, 7, 6); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 51; 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goto __pyx_L3_error;} - __pyx_v_grad = __Pyx_PyObject_to_MemoryviewSlice_ds_double(values[6]); if (unlikely(!__pyx_v_grad.memview)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 51; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_N = __Pyx_PyInt_As_int(values[0]); if (unlikely((__pyx_v_N == (int)-1) && PyErr_Occurred())) __PYX_ERR(0, 53, __pyx_L3_error) + __pyx_v_M = __Pyx_PyInt_As_int(values[1]); if (unlikely((__pyx_v_M == (int)-1) && PyErr_Occurred())) __PYX_ERR(0, 53, __pyx_L3_error) + __pyx_v_Q = __Pyx_PyInt_As_int(values[2]); if (unlikely((__pyx_v_Q == (int)-1) && PyErr_Occurred())) __PYX_ERR(0, 53, __pyx_L3_error) + __pyx_v_tmp = __Pyx_PyObject_to_MemoryviewSlice_dsds_double(values[3], PyBUF_WRITABLE); if (unlikely(!__pyx_v_tmp.memview)) __PYX_ERR(0, 53, __pyx_L3_error) + __pyx_v_X = __Pyx_PyObject_to_MemoryviewSlice_dsds_double(values[4], PyBUF_WRITABLE); if (unlikely(!__pyx_v_X.memview)) __PYX_ERR(0, 53, __pyx_L3_error) + __pyx_v_X2 = __Pyx_PyObject_to_MemoryviewSlice_dsds_double(values[5], PyBUF_WRITABLE); 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int __pyx_t_2; - Py_ssize_t __pyx_t_3; - int __pyx_t_4; + int __pyx_t_3; + Py_ssize_t __pyx_t_4; int __pyx_t_5; int __pyx_t_6; int __pyx_t_7; - Py_ssize_t __pyx_t_8; - Py_ssize_t __pyx_t_9; - Py_ssize_t __pyx_t_10; + int __pyx_t_8; + int __pyx_t_9; + int __pyx_t_10; Py_ssize_t __pyx_t_11; Py_ssize_t __pyx_t_12; Py_ssize_t __pyx_t_13; Py_ssize_t __pyx_t_14; + Py_ssize_t __pyx_t_15; + Py_ssize_t __pyx_t_16; + Py_ssize_t __pyx_t_17; __Pyx_RefNannySetupContext("lengthscale_grads", 0); - /* "GPy/kern/_src/stationary_cython.pyx":54 + /* "GPy/kern/src/stationary_cython.pyx":56 * cdef int q, n, m * cdef double gradq, dist * with nogil: # <<<<<<<<<<<<<< @@ -2840,10 +3580,11 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_6lengthscale_grad #ifdef WITH_THREAD PyThreadState *_save; Py_UNBLOCK_THREADS + __Pyx_FastGIL_Remember(); #endif /*try:*/ { - /* "GPy/kern/_src/stationary_cython.pyx":55 + /* "GPy/kern/src/stationary_cython.pyx":57 * cdef double gradq, dist * with nogil: * for q in range(Q): # <<<<<<<<<<<<<< @@ -2851,68 +3592,71 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_6lengthscale_grad * for n in range(N): */ __pyx_t_1 = __pyx_v_Q; 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+ for (__pyx_t_7 = 0; __pyx_t_7 < __pyx_t_6; __pyx_t_7+=1) { + __pyx_v_n = __pyx_t_7; - /* "GPy/kern/_src/stationary_cython.pyx":58 + /* "GPy/kern/src/stationary_cython.pyx":60 * grad[q] = 0.0 * for n in range(N): * for m in range(M): # <<<<<<<<<<<<<< * dist = X[n,q] - X2[m,q] * grad[q] += tmp[n, m] * dist * dist */ - __pyx_t_6 = __pyx_v_M; - for (__pyx_t_7 = 0; __pyx_t_7 < __pyx_t_6; __pyx_t_7+=1) { - __pyx_v_m = __pyx_t_7; + __pyx_t_8 = __pyx_v_M; + __pyx_t_9 = __pyx_t_8; + for (__pyx_t_10 = 0; __pyx_t_10 < __pyx_t_9; __pyx_t_10+=1) { + __pyx_v_m = __pyx_t_10; - /* "GPy/kern/_src/stationary_cython.pyx":59 + /* "GPy/kern/src/stationary_cython.pyx":61 * for n in range(N): * for m in range(M): * dist = X[n,q] - X2[m,q] # <<<<<<<<<<<<<< * grad[q] += tmp[n, m] * dist * dist */ - __pyx_t_8 = __pyx_v_n; - __pyx_t_9 = __pyx_v_q; - __pyx_t_10 = __pyx_v_m; - __pyx_t_11 = __pyx_v_q; - __pyx_v_dist = ((*((double *) ( /* dim=1 */ (( /* dim=0 */ (__pyx_v_X.data + __pyx_t_8 * __pyx_v_X.strides[0]) ) + __pyx_t_9 * __pyx_v_X.strides[1]) ))) - (*((double *) ( /* dim=1 */ (( /* dim=0 */ (__pyx_v_X2.data + __pyx_t_10 * __pyx_v_X2.strides[0]) ) + __pyx_t_11 * __pyx_v_X2.strides[1]) )))); 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+ __pyx_t_17 = __pyx_v_q; + *((double *) ( /* dim=0 */ (__pyx_v_grad.data + __pyx_t_17 * __pyx_v_grad.strides[0]) )) += (((*((double *) ( /* dim=1 */ (( /* dim=0 */ (__pyx_v_tmp.data + __pyx_t_15 * __pyx_v_tmp.strides[0]) ) + __pyx_t_16 * __pyx_v_tmp.strides[1]) ))) * __pyx_v_dist) * __pyx_v_dist); } } } } - /* "GPy/kern/_src/stationary_cython.pyx":54 + /* "GPy/kern/src/stationary_cython.pyx":56 * cdef int q, n, m * cdef double gradq, dist * with nogil: # <<<<<<<<<<<<<< @@ -2922,6 +3666,7 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_6lengthscale_grad /*finally:*/ { /*normal exit:*/{ #ifdef WITH_THREAD + __Pyx_FastGIL_Forget(); Py_BLOCK_THREADS #endif goto __pyx_L5; @@ -2930,7 +3675,7 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_6lengthscale_grad } } - /* "GPy/kern/_src/stationary_cython.pyx":51 + /* "GPy/kern/src/stationary_cython.pyx":53 * _lengthscale_grads(N, M, Q, tmp, X, X2, grad) # return nothing, work in place. * * def lengthscale_grads(int N, int M, int Q, double[:,:] tmp, double[:,:] X, double[:,:] X2, double[:] grad): # <<<<<<<<<<<<<< @@ -2949,12 +3694,12 @@ static PyObject *__pyx_pf_3GPy_4kern_4_src_17stationary_cython_6lengthscale_grad return __pyx_r; } -/* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":197 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":258 * # experimental exception made for __getbuffer__ and __releasebuffer__ * # -- the details of this may change. * def __getbuffer__(ndarray self, Py_buffer* info, int flags): # <<<<<<<<<<<<<< * # This implementation of getbuffer is geared towards Cython - * # requirements, and does not yet fullfill the PEP. + * # requirements, and does not yet fulfill the PEP. */ /* Python wrapper */ @@ -2971,7 +3716,6 @@ static CYTHON_UNUSED int __pyx_pw_5numpy_7ndarray_1__getbuffer__(PyObject *__pyx } static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, Py_buffer *__pyx_v_info, int __pyx_v_flags) { - int __pyx_v_copy_shape; int __pyx_v_i; int __pyx_v_ndim; int __pyx_v_endian_detector; @@ -2980,7 +3724,6 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P char *__pyx_v_f; 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- /* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":233 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":287 * for i in range(ndim): * info.strides[i] = PyArray_STRIDES(self)[i] * info.shape[i] = PyArray_DIMS(self)[i] # <<<<<<<<<<<<<< @@ -3268,17 +3959,17 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P (__pyx_v_info->shape[__pyx_v_i]) = (PyArray_DIMS(__pyx_v_self)[__pyx_v_i]); } - /* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":226 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":280 * info.buf = PyArray_DATA(self) * info.ndim = ndim - * if copy_shape: # <<<<<<<<<<<<<< + * if sizeof(npy_intp) != sizeof(Py_ssize_t): # <<<<<<<<<<<<<< * # Allocate new buffer for strides and shape info. * # This is allocated as one block, strides first. */ - goto __pyx_L11; + goto __pyx_L9; } - /* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":235 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":289 * info.shape[i] = PyArray_DIMS(self)[i] * else: * info.strides = PyArray_STRIDES(self) # <<<<<<<<<<<<<< @@ -3288,7 +3979,7 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P /*else*/ { __pyx_v_info->strides = ((Py_ssize_t *)PyArray_STRIDES(__pyx_v_self)); - /* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":236 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":290 * else: * info.strides = PyArray_STRIDES(self) * info.shape = PyArray_DIMS(self) # <<<<<<<<<<<<<< @@ -3297,9 +3988,9 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ __pyx_v_info->shape = ((Py_ssize_t *)PyArray_DIMS(__pyx_v_self)); } - __pyx_L11:; + __pyx_L9:; - /* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":237 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":291 * info.strides = PyArray_STRIDES(self) * info.shape = PyArray_DIMS(self) * info.suboffsets = NULL # <<<<<<<<<<<<<< @@ -3308,7 +3999,7 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ __pyx_v_info->suboffsets = NULL; - /* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":238 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":292 * info.shape = PyArray_DIMS(self) * info.suboffsets = NULL * info.itemsize = PyArray_ITEMSIZE(self) # <<<<<<<<<<<<<< @@ -3317,7 +4008,7 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ __pyx_v_info->itemsize = PyArray_ITEMSIZE(__pyx_v_self); - /* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":239 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":293 * info.suboffsets = NULL * info.itemsize = PyArray_ITEMSIZE(self) * info.readonly = not PyArray_ISWRITEABLE(self) # <<<<<<<<<<<<<< @@ -3326,106 +4017,54 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ __pyx_v_info->readonly = (!(PyArray_ISWRITEABLE(__pyx_v_self) != 0)); - /* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":242 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":296 * * cdef int t * cdef char* f = NULL # <<<<<<<<<<<<<< - * cdef dtype descr = self.descr + * cdef dtype descr = PyArray_DESCR(self) * cdef int offset */ __pyx_v_f = NULL; - /* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":243 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":297 * cdef int t * cdef char* f = NULL - * cdef dtype descr = self.descr # <<<<<<<<<<<<<< + * cdef dtype descr = PyArray_DESCR(self) # <<<<<<<<<<<<<< * cdef int offset * */ - __pyx_t_3 = ((PyObject *)__pyx_v_self->descr); + __pyx_t_7 = PyArray_DESCR(__pyx_v_self); + __pyx_t_3 = ((PyObject *)__pyx_t_7); __Pyx_INCREF(__pyx_t_3); __pyx_v_descr = ((PyArray_Descr *)__pyx_t_3); __pyx_t_3 = 0; - /* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":246 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":300 * cdef int offset * - * cdef bint hasfields = PyDataType_HASFIELDS(descr) # <<<<<<<<<<<<<< + * info.obj = self # <<<<<<<<<<<<<< * - * if not hasfields and not copy_shape: + * if not PyDataType_HASFIELDS(descr): */ - __pyx_v_hasfields = PyDataType_HASFIELDS(__pyx_v_descr); + __Pyx_INCREF(((PyObject *)__pyx_v_self)); + __Pyx_GIVEREF(((PyObject *)__pyx_v_self)); + __Pyx_GOTREF(__pyx_v_info->obj); + __Pyx_DECREF(__pyx_v_info->obj); + __pyx_v_info->obj = ((PyObject *)__pyx_v_self); - /* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":248 - * cdef bint hasfields = PyDataType_HASFIELDS(descr) + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":302 + * info.obj = self * - * if not hasfields and not copy_shape: # <<<<<<<<<<<<<< - * # do not call releasebuffer - * info.obj = None - */ - __pyx_t_2 = ((!(__pyx_v_hasfields != 0)) != 0); - if (__pyx_t_2) { - } else { - __pyx_t_1 = __pyx_t_2; - goto __pyx_L15_bool_binop_done; - } - __pyx_t_2 = ((!(__pyx_v_copy_shape != 0)) != 0); - __pyx_t_1 = __pyx_t_2; - __pyx_L15_bool_binop_done:; - if (__pyx_t_1) { - - /* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":250 - * if not hasfields and not copy_shape: - * # do not call releasebuffer - * info.obj = None # <<<<<<<<<<<<<< - * else: - * # need to call releasebuffer - */ - __Pyx_INCREF(Py_None); - __Pyx_GIVEREF(Py_None); - __Pyx_GOTREF(__pyx_v_info->obj); - __Pyx_DECREF(__pyx_v_info->obj); - __pyx_v_info->obj = Py_None; - - /* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":248 - * cdef bint hasfields = PyDataType_HASFIELDS(descr) - * - * if not hasfields and not copy_shape: # <<<<<<<<<<<<<< - * # do not call releasebuffer - * info.obj = None - */ - goto __pyx_L14; - } - - /* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":253 - * else: - * # need to call releasebuffer - * info.obj = self # <<<<<<<<<<<<<< - * - * if not hasfields: - */ - /*else*/ { - __Pyx_INCREF(((PyObject *)__pyx_v_self)); - __Pyx_GIVEREF(((PyObject *)__pyx_v_self)); - __Pyx_GOTREF(__pyx_v_info->obj); - __Pyx_DECREF(__pyx_v_info->obj); - __pyx_v_info->obj = ((PyObject *)__pyx_v_self); - } - __pyx_L14:; - - /* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":255 - * info.obj = self - * - * if not hasfields: # <<<<<<<<<<<<<< + * if not PyDataType_HASFIELDS(descr): # <<<<<<<<<<<<<< * t = descr.type_num * if ((descr.byteorder == c'>' and little_endian) or */ - __pyx_t_1 = ((!(__pyx_v_hasfields != 0)) != 0); + __pyx_t_1 = ((!(PyDataType_HASFIELDS(__pyx_v_descr) != 0)) != 0); if (__pyx_t_1) { - /* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":256 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":303 * - * if not hasfields: + * if not PyDataType_HASFIELDS(descr): * t = descr.type_num # <<<<<<<<<<<<<< * if ((descr.byteorder == c'>' and little_endian) or * (descr.byteorder == c'<' and not little_endian)): @@ -3433,8 +4072,8 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P __pyx_t_4 = __pyx_v_descr->type_num; __pyx_v_t = __pyx_t_4; - /* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":257 - * if not hasfields: + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":304 + * if not PyDataType_HASFIELDS(descr): * t = descr.type_num * if ((descr.byteorder == c'>' and little_endian) or # <<<<<<<<<<<<<< * (descr.byteorder == c'<' and not little_endian)): @@ -3442,18 +4081,18 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ __pyx_t_2 = ((__pyx_v_descr->byteorder == '>') != 0); if (!__pyx_t_2) { - goto __pyx_L20_next_or; + goto __pyx_L15_next_or; } else { } __pyx_t_2 = (__pyx_v_little_endian != 0); if (!__pyx_t_2) { } else { __pyx_t_1 = __pyx_t_2; - goto __pyx_L19_bool_binop_done; + goto __pyx_L14_bool_binop_done; } - __pyx_L20_next_or:; + __pyx_L15_next_or:; - /* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":258 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":305 * t = descr.type_num * if ((descr.byteorder == c'>' and little_endian) or * (descr.byteorder == c'<' and not little_endian)): # <<<<<<<<<<<<<< @@ -3464,36 +4103,36 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P if (__pyx_t_2) { } else { __pyx_t_1 = __pyx_t_2; - goto __pyx_L19_bool_binop_done; + goto __pyx_L14_bool_binop_done; } __pyx_t_2 = ((!(__pyx_v_little_endian != 0)) != 0); __pyx_t_1 = __pyx_t_2; - __pyx_L19_bool_binop_done:; + __pyx_L14_bool_binop_done:; - /* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":257 - * if not hasfields: + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":304 + * if not PyDataType_HASFIELDS(descr): * t = descr.type_num * if ((descr.byteorder == c'>' and little_endian) or # <<<<<<<<<<<<<< * (descr.byteorder == c'<' and not little_endian)): * raise ValueError(u"Non-native byte order not supported") */ - if (__pyx_t_1) { + if (unlikely(__pyx_t_1)) { - /* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":259 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":306 * if ((descr.byteorder == c'>' and little_endian) or * (descr.byteorder == c'<' and not little_endian)): * raise ValueError(u"Non-native byte order not supported") # <<<<<<<<<<<<<< * if t == NPY_BYTE: f = "b" * elif t == NPY_UBYTE: f = "B" */ - __pyx_t_3 = __Pyx_PyObject_Call(__pyx_builtin_ValueError, __pyx_tuple__3, NULL); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 259; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = __Pyx_PyObject_Call(__pyx_builtin_ValueError, __pyx_tuple__3, NULL); if (unlikely(!__pyx_t_3)) __PYX_ERR(1, 306, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_3); __Pyx_Raise(__pyx_t_3, 0, 0, 0); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - {__pyx_filename = __pyx_f[1]; __pyx_lineno = 259; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __PYX_ERR(1, 306, __pyx_L1_error) - /* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":257 - * if not hasfields: + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":304 + * if not PyDataType_HASFIELDS(descr): * t = descr.type_num * if ((descr.byteorder == c'>' and little_endian) or # <<<<<<<<<<<<<< * (descr.byteorder == c'<' and not little_endian)): @@ -3501,7 +4140,7 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ } - /* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":260 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":307 * (descr.byteorder == c'<' and not little_endian)): * raise ValueError(u"Non-native byte order not supported") * if t == NPY_BYTE: f = "b" # <<<<<<<<<<<<<< @@ -3510,213 +4149,208 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ switch (__pyx_v_t) { case NPY_BYTE: - __pyx_v_f = __pyx_k_b; + __pyx_v_f = ((char *)"b"); break; + case NPY_UBYTE: - /* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":261 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":308 * raise ValueError(u"Non-native byte order not supported") * if t == NPY_BYTE: f = "b" * elif t == NPY_UBYTE: f = "B" # <<<<<<<<<<<<<< * elif t == NPY_SHORT: f = "h" * elif t == NPY_USHORT: f = "H" */ - case NPY_UBYTE: - __pyx_v_f = __pyx_k_B; + __pyx_v_f = ((char *)"B"); break; + case NPY_SHORT: - /* "../../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":262 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":309 * if t == NPY_BYTE: f = "b" * elif t == NPY_UBYTE: f = "B" * elif t == NPY_SHORT: f = "h" # <<<<<<<<<<<<<< * elif t == NPY_USHORT: f = "H" * elif t == NPY_INT: f = "i" */ - case NPY_SHORT: - __pyx_v_f = __pyx_k_h; + __pyx_v_f = ((char *)"h"); 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__pyx_L1_error;} + __pyx_t_4 = __Pyx_GetBuffer(__pyx_v_obj, (&__pyx_v_self->view), __pyx_v_flags); if (unlikely(__pyx_t_4 == ((int)-1))) __PYX_ERR(2, 349, __pyx_L1_error) - /* "View.MemoryView":324 + /* "View.MemoryView":350 * if type(self) is memoryview or obj is not None: * __Pyx_GetBuffer(obj, &self.view, flags) * if self.view.obj == NULL: # <<<<<<<<<<<<<< @@ -7113,7 +8617,7 @@ static int __pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview___cinit_ __pyx_t_1 = ((((PyObject *)__pyx_v_self->view.obj) == NULL) != 0); if (__pyx_t_1) { - /* "View.MemoryView":325 + /* "View.MemoryView":351 * __Pyx_GetBuffer(obj, &self.view, flags) * if self.view.obj == NULL: * (<__pyx_buffer *> &self.view).obj = Py_None # <<<<<<<<<<<<<< @@ -7122,16 +8626,16 @@ static int __pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview___cinit_ */ ((Py_buffer *)(&__pyx_v_self->view))->obj = Py_None; - /* "View.MemoryView":326 + /* "View.MemoryView":352 * if self.view.obj == NULL: * (<__pyx_buffer *> 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self.lock = __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used] + * __pyx_memoryview_thread_locks_used += 1 # <<<<<<<<<<<<<< + * if self.lock is NULL: + * self.lock = PyThread_allocate_lock() + */ + __pyx_memoryview_thread_locks_used = (__pyx_memoryview_thread_locks_used + 1); + + /* "View.MemoryView":355 * + * global __pyx_memoryview_thread_locks_used + * if __pyx_memoryview_thread_locks_used < THREAD_LOCKS_PREALLOCATED: # <<<<<<<<<<<<<< + * self.lock = __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used] + * __pyx_memoryview_thread_locks_used += 1 + */ + } + + /* "View.MemoryView":358 + * self.lock = __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used] + * __pyx_memoryview_thread_locks_used += 1 + * if self.lock is NULL: # <<<<<<<<<<<<<< + * self.lock = PyThread_allocate_lock() + * if self.lock is NULL: */ __pyx_t_1 = ((__pyx_v_self->lock == NULL) != 0); if (__pyx_t_1) { - /* "View.MemoryView":330 - * self.lock = PyThread_allocate_lock() - * if self.lock == NULL: - * raise MemoryError # <<<<<<<<<<<<<< + /* "View.MemoryView":359 + * __pyx_memoryview_thread_locks_used += 1 + * if self.lock is NULL: + * self.lock = PyThread_allocate_lock() # <<<<<<<<<<<<<< + * if self.lock is NULL: + * raise MemoryError + */ + __pyx_v_self->lock = PyThread_allocate_lock(); + + /* "View.MemoryView":360 + * if self.lock is NULL: + * self.lock = PyThread_allocate_lock() + * if self.lock is NULL: # <<<<<<<<<<<<<< + * raise MemoryError + * + */ + __pyx_t_1 = ((__pyx_v_self->lock == NULL) != 0); + if (unlikely(__pyx_t_1)) { + + /* "View.MemoryView":361 + * self.lock = PyThread_allocate_lock() + * if self.lock is NULL: + * raise MemoryError # <<<<<<<<<<<<<< * * if flags & PyBUF_FORMAT: */ - PyErr_NoMemory(); {__pyx_filename = __pyx_f[2]; __pyx_lineno = 330; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + PyErr_NoMemory(); __PYX_ERR(2, 361, __pyx_L1_error) - /* "View.MemoryView":329 - * - * self.lock = PyThread_allocate_lock() - * if self.lock == NULL: # <<<<<<<<<<<<<< - * raise MemoryError + /* "View.MemoryView":360 + * if self.lock is NULL: + * self.lock = PyThread_allocate_lock() + * if self.lock is NULL: # <<<<<<<<<<<<<< + * raise MemoryError * + */ + } + + /* "View.MemoryView":358 + * self.lock = __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used] + * __pyx_memoryview_thread_locks_used += 1 + * if self.lock is NULL: # <<<<<<<<<<<<<< + * self.lock = PyThread_allocate_lock() + * if self.lock is NULL: */ } - /* "View.MemoryView":332 - * raise MemoryError + /* "View.MemoryView":363 + * raise MemoryError * * if flags & PyBUF_FORMAT: # <<<<<<<<<<<<<< - * self.dtype_is_object = self.view.format == b'O' + * self.dtype_is_object = (self.view.format[0] == b'O' and self.view.format[1] == b'\0') * else: */ __pyx_t_1 = ((__pyx_v_flags & PyBUF_FORMAT) != 0); if (__pyx_t_1) { - /* "View.MemoryView":333 + /* "View.MemoryView":364 * * if flags & PyBUF_FORMAT: - * self.dtype_is_object = self.view.format == b'O' # <<<<<<<<<<<<<< + * self.dtype_is_object = (self.view.format[0] == b'O' and self.view.format[1] == b'\0') # <<<<<<<<<<<<<< * else: * self.dtype_is_object = dtype_is_object */ - __pyx_t_5 = __Pyx_PyBytes_FromString(__pyx_v_self->view.format); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 333; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __Pyx_GOTREF(__pyx_t_5); - __pyx_t_6 = PyObject_RichCompare(__pyx_t_5, __pyx_n_b_O, Py_EQ); __Pyx_XGOTREF(__pyx_t_6); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 333; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; - __pyx_t_1 = __Pyx_PyObject_IsTrue(__pyx_t_6); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 333; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; + __pyx_t_2 = (((__pyx_v_self->view.format[0]) == 'O') != 0); + if (__pyx_t_2) { + } else { + __pyx_t_1 = __pyx_t_2; + goto __pyx_L11_bool_binop_done; + } + __pyx_t_2 = (((__pyx_v_self->view.format[1]) == '\x00') != 0); + __pyx_t_1 = __pyx_t_2; + __pyx_L11_bool_binop_done:; __pyx_v_self->dtype_is_object = __pyx_t_1; - /* "View.MemoryView":332 - * raise MemoryError + /* "View.MemoryView":363 + * raise MemoryError * * if flags & PyBUF_FORMAT: # <<<<<<<<<<<<<< - * self.dtype_is_object = self.view.format == b'O' + * self.dtype_is_object = (self.view.format[0] == b'O' and self.view.format[1] == b'\0') * else: */ - goto __pyx_L8; + goto __pyx_L10; } - /* "View.MemoryView":335 - * self.dtype_is_object = self.view.format == b'O' + /* "View.MemoryView":366 + * self.dtype_is_object = (self.view.format[0] == b'O' and self.view.format[1] == b'\0') * else: * self.dtype_is_object = dtype_is_object # <<<<<<<<<<<<<< * @@ -7231,9 +8794,9 @@ static int __pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview___cinit_ /*else*/ { __pyx_v_self->dtype_is_object = __pyx_v_dtype_is_object; } - __pyx_L8:; + __pyx_L10:; - /* "View.MemoryView":337 + /* "View.MemoryView":368 * self.dtype_is_object = dtype_is_object * * self.acquisition_count_aligned_p = <__pyx_atomic_int *> align_pointer( # <<<<<<<<<<<<<< @@ -7242,7 +8805,7 @@ static int __pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview___cinit_ */ __pyx_v_self->acquisition_count_aligned_p = ((__pyx_atomic_int *)__pyx_align_pointer(((void *)(&(__pyx_v_self->acquisition_count[0]))), (sizeof(__pyx_atomic_int)))); - /* "View.MemoryView":339 + /* "View.MemoryView":370 * self.acquisition_count_aligned_p = <__pyx_atomic_int *> align_pointer( * &self.acquisition_count[0], sizeof(__pyx_atomic_int)) * self.typeinfo = NULL # <<<<<<<<<<<<<< @@ -7251,7 +8814,7 @@ static int __pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview___cinit_ */ __pyx_v_self->typeinfo = NULL; - /* "View.MemoryView":319 + /* "View.MemoryView":345 * cdef __Pyx_TypeInfo *typeinfo * * def __cinit__(memoryview self, object obj, int flags, bint dtype_is_object=False): # <<<<<<<<<<<<<< @@ -7263,8 +8826,6 @@ static int __pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview___cinit_ __pyx_r = 0; goto __pyx_L0; __pyx_L1_error:; - __Pyx_XDECREF(__pyx_t_5); - __Pyx_XDECREF(__pyx_t_6); __Pyx_AddTraceback("View.MemoryView.memoryview.__cinit__", __pyx_clineno, __pyx_lineno, __pyx_filename); __pyx_r = -1; __pyx_L0:; @@ -7272,7 +8833,7 @@ static int __pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview___cinit_ return __pyx_r; } -/* "View.MemoryView":341 +/* "View.MemoryView":372 * self.typeinfo = NULL * * def __dealloc__(memoryview self): # <<<<<<<<<<<<<< @@ -7292,12 +8853,18 @@ static void __pyx_memoryview___dealloc__(PyObject *__pyx_v_self) { } static void __pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview_2__dealloc__(struct __pyx_memoryview_obj *__pyx_v_self) { + int __pyx_v_i; __Pyx_RefNannyDeclarations int __pyx_t_1; int __pyx_t_2; + int __pyx_t_3; + int __pyx_t_4; + int __pyx_t_5; + PyThread_type_lock __pyx_t_6; + PyThread_type_lock __pyx_t_7; __Pyx_RefNannySetupContext("__dealloc__", 0); - /* "View.MemoryView":342 + /* "View.MemoryView":373 * * def __dealloc__(memoryview self): * if self.obj is not None: # <<<<<<<<<<<<<< @@ -7308,16 +8875,16 @@ static void __pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview_2__deal __pyx_t_2 = (__pyx_t_1 != 0); if (__pyx_t_2) { - /* "View.MemoryView":343 + /* "View.MemoryView":374 * def __dealloc__(memoryview self): * if self.obj is not None: * __Pyx_ReleaseBuffer(&self.view) # <<<<<<<<<<<<<< * - * if self.lock != NULL: + * cdef int i */ __Pyx_ReleaseBuffer((&__pyx_v_self->view)); - /* "View.MemoryView":342 + /* "View.MemoryView":373 * * def __dealloc__(memoryview self): * if self.obj is not None: # <<<<<<<<<<<<<< @@ -7326,35 +8893,127 @@ static void __pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview_2__deal */ } - /* "View.MemoryView":345 - * __Pyx_ReleaseBuffer(&self.view) - * + /* "View.MemoryView":378 + * cdef int i + * global __pyx_memoryview_thread_locks_used * if self.lock != NULL: # <<<<<<<<<<<<<< - * PyThread_free_lock(self.lock) - * + * for i in range(__pyx_memoryview_thread_locks_used): + * if __pyx_memoryview_thread_locks[i] is self.lock: */ __pyx_t_2 = ((__pyx_v_self->lock != NULL) != 0); if (__pyx_t_2) { - /* "View.MemoryView":346 - * + /* "View.MemoryView":379 + * global __pyx_memoryview_thread_locks_used * if self.lock != NULL: - * PyThread_free_lock(self.lock) # <<<<<<<<<<<<<< + * for i in range(__pyx_memoryview_thread_locks_used): # <<<<<<<<<<<<<< + * if __pyx_memoryview_thread_locks[i] is self.lock: + * __pyx_memoryview_thread_locks_used -= 1 + */ + __pyx_t_3 = __pyx_memoryview_thread_locks_used; + __pyx_t_4 = __pyx_t_3; + for (__pyx_t_5 = 0; __pyx_t_5 < __pyx_t_4; __pyx_t_5+=1) { + __pyx_v_i = __pyx_t_5; + + /* "View.MemoryView":380 + * if self.lock != NULL: + * for i in range(__pyx_memoryview_thread_locks_used): + * if __pyx_memoryview_thread_locks[i] is self.lock: # <<<<<<<<<<<<<< + * __pyx_memoryview_thread_locks_used -= 1 + * if i != __pyx_memoryview_thread_locks_used: + */ + __pyx_t_2 = (((__pyx_memoryview_thread_locks[__pyx_v_i]) == __pyx_v_self->lock) != 0); + if (__pyx_t_2) { + + /* "View.MemoryView":381 + * for i in range(__pyx_memoryview_thread_locks_used): + * if __pyx_memoryview_thread_locks[i] is self.lock: + * __pyx_memoryview_thread_locks_used -= 1 # <<<<<<<<<<<<<< + * if i != __pyx_memoryview_thread_locks_used: + * __pyx_memoryview_thread_locks[i], __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used] = ( + */ + __pyx_memoryview_thread_locks_used = (__pyx_memoryview_thread_locks_used - 1); + + /* "View.MemoryView":382 + * if __pyx_memoryview_thread_locks[i] is self.lock: + * __pyx_memoryview_thread_locks_used -= 1 + * if i != __pyx_memoryview_thread_locks_used: # <<<<<<<<<<<<<< + * __pyx_memoryview_thread_locks[i], __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used] = ( + * __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used], __pyx_memoryview_thread_locks[i]) + */ + __pyx_t_2 = ((__pyx_v_i != __pyx_memoryview_thread_locks_used) != 0); + if (__pyx_t_2) { + + /* "View.MemoryView":384 + * if i != __pyx_memoryview_thread_locks_used: + * __pyx_memoryview_thread_locks[i], __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used] = ( + * __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used], __pyx_memoryview_thread_locks[i]) # <<<<<<<<<<<<<< + * break + * else: + */ + __pyx_t_6 = (__pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used]); + __pyx_t_7 = (__pyx_memoryview_thread_locks[__pyx_v_i]); + + /* "View.MemoryView":383 + * __pyx_memoryview_thread_locks_used -= 1 + * if i != __pyx_memoryview_thread_locks_used: + * __pyx_memoryview_thread_locks[i], __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used] = ( # <<<<<<<<<<<<<< + * __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used], __pyx_memoryview_thread_locks[i]) + * break + */ + (__pyx_memoryview_thread_locks[__pyx_v_i]) = __pyx_t_6; + (__pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used]) = __pyx_t_7; + + /* "View.MemoryView":382 + * if __pyx_memoryview_thread_locks[i] is self.lock: + * __pyx_memoryview_thread_locks_used -= 1 + * if i != __pyx_memoryview_thread_locks_used: # <<<<<<<<<<<<<< + * __pyx_memoryview_thread_locks[i], __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used] = ( + * __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used], __pyx_memoryview_thread_locks[i]) + */ + } + + /* "View.MemoryView":385 + * __pyx_memoryview_thread_locks[i], __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used] = ( + * __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used], __pyx_memoryview_thread_locks[i]) + * break # <<<<<<<<<<<<<< + * else: + * PyThread_free_lock(self.lock) + */ + goto __pyx_L6_break; + + /* "View.MemoryView":380 + * if self.lock != NULL: + * for i in range(__pyx_memoryview_thread_locks_used): + * if __pyx_memoryview_thread_locks[i] is self.lock: # <<<<<<<<<<<<<< + * __pyx_memoryview_thread_locks_used -= 1 + * if i != __pyx_memoryview_thread_locks_used: + */ + } + } + /*else*/ { + + /* "View.MemoryView":387 + * break + * else: + * PyThread_free_lock(self.lock) # <<<<<<<<<<<<<< * * cdef char *get_item_pointer(memoryview self, object index) except NULL: */ - PyThread_free_lock(__pyx_v_self->lock); + PyThread_free_lock(__pyx_v_self->lock); + } + __pyx_L6_break:; - /* "View.MemoryView":345 - * __Pyx_ReleaseBuffer(&self.view) - * + /* "View.MemoryView":378 + * cdef int i + * global __pyx_memoryview_thread_locks_used * if self.lock != NULL: # <<<<<<<<<<<<<< - * PyThread_free_lock(self.lock) - * + * for i in range(__pyx_memoryview_thread_locks_used): + * if __pyx_memoryview_thread_locks[i] is self.lock: */ } - /* "View.MemoryView":341 + /* "View.MemoryView":372 * self.typeinfo = NULL * * def __dealloc__(memoryview self): # <<<<<<<<<<<<<< @@ -7366,8 +9025,8 @@ static void __pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview_2__deal __Pyx_RefNannyFinishContext(); } -/* "View.MemoryView":348 - * PyThread_free_lock(self.lock) +/* "View.MemoryView":389 + * PyThread_free_lock(self.lock) * * cdef char *get_item_pointer(memoryview self, object index) except NULL: # <<<<<<<<<<<<<< * cdef Py_ssize_t dim @@ -7387,12 +9046,9 @@ static char *__pyx_memoryview_get_item_pointer(struct __pyx_memoryview_obj *__py PyObject *__pyx_t_5 = NULL; Py_ssize_t __pyx_t_6; char *__pyx_t_7; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; __Pyx_RefNannySetupContext("get_item_pointer", 0); - /* "View.MemoryView":350 + /* "View.MemoryView":391 * cdef char *get_item_pointer(memoryview self, object index) except NULL: * cdef Py_ssize_t dim * cdef char *itemp = self.view.buf # <<<<<<<<<<<<<< @@ -7401,7 +9057,7 @@ static char *__pyx_memoryview_get_item_pointer(struct __pyx_memoryview_obj *__py */ __pyx_v_itemp = ((char *)__pyx_v_self->view.buf); - /* "View.MemoryView":352 + /* "View.MemoryView":393 * cdef char *itemp = self.view.buf * * for dim, idx in enumerate(index): # <<<<<<<<<<<<<< @@ -7413,26 +9069,26 @@ static char *__pyx_memoryview_get_item_pointer(struct __pyx_memoryview_obj *__py __pyx_t_2 = __pyx_v_index; __Pyx_INCREF(__pyx_t_2); __pyx_t_3 = 0; __pyx_t_4 = NULL; } else { - __pyx_t_3 = -1; __pyx_t_2 = PyObject_GetIter(__pyx_v_index); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 352; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = -1; __pyx_t_2 = PyObject_GetIter(__pyx_v_index); if (unlikely(!__pyx_t_2)) __PYX_ERR(2, 393, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_2); - __pyx_t_4 = Py_TYPE(__pyx_t_2)->tp_iternext; if (unlikely(!__pyx_t_4)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 352; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = Py_TYPE(__pyx_t_2)->tp_iternext; if (unlikely(!__pyx_t_4)) __PYX_ERR(2, 393, __pyx_L1_error) } for (;;) { if (likely(!__pyx_t_4)) { if (likely(PyList_CheckExact(__pyx_t_2))) { if (__pyx_t_3 >= PyList_GET_SIZE(__pyx_t_2)) break; - #if CYTHON_COMPILING_IN_CPYTHON - __pyx_t_5 = PyList_GET_ITEM(__pyx_t_2, __pyx_t_3); __Pyx_INCREF(__pyx_t_5); __pyx_t_3++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 352; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + #if CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS + __pyx_t_5 = PyList_GET_ITEM(__pyx_t_2, __pyx_t_3); __Pyx_INCREF(__pyx_t_5); __pyx_t_3++; if (unlikely(0 < 0)) __PYX_ERR(2, 393, __pyx_L1_error) #else - __pyx_t_5 = PySequence_ITEM(__pyx_t_2, __pyx_t_3); __pyx_t_3++; if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 352; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PySequence_ITEM(__pyx_t_2, __pyx_t_3); __pyx_t_3++; if (unlikely(!__pyx_t_5)) __PYX_ERR(2, 393, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_5); #endif } else { if (__pyx_t_3 >= PyTuple_GET_SIZE(__pyx_t_2)) break; - #if CYTHON_COMPILING_IN_CPYTHON - __pyx_t_5 = PyTuple_GET_ITEM(__pyx_t_2, __pyx_t_3); __Pyx_INCREF(__pyx_t_5); __pyx_t_3++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 352; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + #if CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS + __pyx_t_5 = PyTuple_GET_ITEM(__pyx_t_2, __pyx_t_3); __Pyx_INCREF(__pyx_t_5); __pyx_t_3++; if (unlikely(0 < 0)) __PYX_ERR(2, 393, __pyx_L1_error) #else - __pyx_t_5 = PySequence_ITEM(__pyx_t_2, __pyx_t_3); __pyx_t_3++; if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 352; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = PySequence_ITEM(__pyx_t_2, __pyx_t_3); __pyx_t_3++; if (unlikely(!__pyx_t_5)) __PYX_ERR(2, 393, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_5); #endif } @@ -7441,8 +9097,8 @@ static char *__pyx_memoryview_get_item_pointer(struct __pyx_memoryview_obj *__py if (unlikely(!__pyx_t_5)) { PyObject* exc_type = 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*__pyx_memview_slice(struct __pyx_memoryview_ */ __pyx_v_p_src = (&__pyx_v_memviewsliceobj->from_slice); - /* "View.MemoryView":682 + /* "View.MemoryView":720 * assert memview.view.ndim > 0 * * if isinstance(memview, _memoryviewslice): # <<<<<<<<<<<<<< @@ -11492,7 +13295,7 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ goto __pyx_L3; } - /* "View.MemoryView":686 + /* "View.MemoryView":724 * p_src = &memviewsliceobj.from_slice * else: * slice_copy(memview, &src) # <<<<<<<<<<<<<< @@ -11502,7 +13305,7 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ /*else*/ { __pyx_memoryview_slice_copy(__pyx_v_memview, (&__pyx_v_src)); - /* "View.MemoryView":687 + /* "View.MemoryView":725 * else: * slice_copy(memview, &src) * p_src = &src # <<<<<<<<<<<<<< @@ -11513,7 +13316,7 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ } __pyx_L3:; - /* "View.MemoryView":693 + /* "View.MemoryView":731 * * * 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Py_TYPE(__pyx_t_3)->tp_iternext; if (unlikely(!__pyx_t_8)) __PYX_ERR(2, 742, __pyx_L1_error) } for (;;) { if (likely(!__pyx_t_8)) { if (likely(PyList_CheckExact(__pyx_t_3))) { if (__pyx_t_7 >= PyList_GET_SIZE(__pyx_t_3)) break; - #if CYTHON_COMPILING_IN_CPYTHON - __pyx_t_9 = PyList_GET_ITEM(__pyx_t_3, __pyx_t_7); __Pyx_INCREF(__pyx_t_9); __pyx_t_7++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 704; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + #if CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS + __pyx_t_9 = PyList_GET_ITEM(__pyx_t_3, __pyx_t_7); __Pyx_INCREF(__pyx_t_9); __pyx_t_7++; if (unlikely(0 < 0)) __PYX_ERR(2, 742, __pyx_L1_error) #else - __pyx_t_9 = PySequence_ITEM(__pyx_t_3, __pyx_t_7); __pyx_t_7++; if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 704; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_9 = PySequence_ITEM(__pyx_t_3, __pyx_t_7); __pyx_t_7++; if (unlikely(!__pyx_t_9)) __PYX_ERR(2, 742, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_9); #endif } else { if (__pyx_t_7 >= PyTuple_GET_SIZE(__pyx_t_3)) break; - #if CYTHON_COMPILING_IN_CPYTHON - __pyx_t_9 = PyTuple_GET_ITEM(__pyx_t_3, __pyx_t_7); __Pyx_INCREF(__pyx_t_9); __pyx_t_7++; if (unlikely(0 < 0)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 704; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + #if CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS + __pyx_t_9 = PyTuple_GET_ITEM(__pyx_t_3, __pyx_t_7); __Pyx_INCREF(__pyx_t_9); __pyx_t_7++; if (unlikely(0 < 0)) __PYX_ERR(2, 742, __pyx_L1_error) #else - __pyx_t_9 = PySequence_ITEM(__pyx_t_3, __pyx_t_7); __pyx_t_7++; if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 704; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_9 = PySequence_ITEM(__pyx_t_3, __pyx_t_7); __pyx_t_7++; if (unlikely(!__pyx_t_9)) __PYX_ERR(2, 742, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_9); #endif } @@ -11591,8 +13394,8 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ if (unlikely(!__pyx_t_9)) { PyObject* exc_type = PyErr_Occurred(); if (exc_type) { - if (likely(exc_type == PyExc_StopIteration || PyErr_GivenExceptionMatches(exc_type, PyExc_StopIteration))) PyErr_Clear(); - else {__pyx_filename = __pyx_f[2]; __pyx_lineno = 704; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (likely(__Pyx_PyErr_GivenExceptionMatches(exc_type, PyExc_StopIteration))) PyErr_Clear(); + else __PYX_ERR(2, 742, __pyx_L1_error) } break; } @@ -11603,7 +13406,7 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ __pyx_v_dim = __pyx_t_6; __pyx_t_6 = (__pyx_t_6 + 1); - /* "View.MemoryView":705 + /* "View.MemoryView":743 * * for dim, index in enumerate(indices): * if PyIndex_Check(index): # <<<<<<<<<<<<<< @@ -11613,25 +13416,25 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ __pyx_t_2 = (PyIndex_Check(__pyx_v_index) != 0); if (__pyx_t_2) { - /* "View.MemoryView":709 + /* "View.MemoryView":747 * p_dst, p_src.shape[dim], p_src.strides[dim], p_src.suboffsets[dim], * dim, new_ndim, p_suboffset_dim, * index, 0, 0, # start, stop, step # <<<<<<<<<<<<<< * 0, 0, 0, # have_{start,stop,step} * False) */ - __pyx_t_10 = __Pyx_PyIndex_AsSsize_t(__pyx_v_index); if (unlikely((__pyx_t_10 == (Py_ssize_t)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 709; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_10 = __Pyx_PyIndex_AsSsize_t(__pyx_v_index); if (unlikely((__pyx_t_10 == (Py_ssize_t)-1) && PyErr_Occurred())) __PYX_ERR(2, 747, __pyx_L1_error) - /* "View.MemoryView":706 + /* "View.MemoryView":744 * for dim, index in enumerate(indices): * if PyIndex_Check(index): * slice_memviewslice( # <<<<<<<<<<<<<< * p_dst, p_src.shape[dim], p_src.strides[dim], p_src.suboffsets[dim], * dim, new_ndim, p_suboffset_dim, */ - __pyx_t_11 = __pyx_memoryview_slice_memviewslice(__pyx_v_p_dst, (__pyx_v_p_src->shape[__pyx_v_dim]), (__pyx_v_p_src->strides[__pyx_v_dim]), (__pyx_v_p_src->suboffsets[__pyx_v_dim]), __pyx_v_dim, __pyx_v_new_ndim, __pyx_v_p_suboffset_dim, __pyx_t_10, 0, 0, 0, 0, 0, 0); if (unlikely(__pyx_t_11 == -1)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 706; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_11 = __pyx_memoryview_slice_memviewslice(__pyx_v_p_dst, (__pyx_v_p_src->shape[__pyx_v_dim]), (__pyx_v_p_src->strides[__pyx_v_dim]), (__pyx_v_p_src->suboffsets[__pyx_v_dim]), __pyx_v_dim, __pyx_v_new_ndim, __pyx_v_p_suboffset_dim, __pyx_t_10, 0, 0, 0, 0, 0, 0); if (unlikely(__pyx_t_11 == ((int)-1))) __PYX_ERR(2, 744, __pyx_L1_error) - /* "View.MemoryView":705 + /* "View.MemoryView":743 * * for dim, index in enumerate(indices): * if PyIndex_Check(index): # <<<<<<<<<<<<<< @@ -11641,7 +13444,7 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ goto __pyx_L6; } - /* "View.MemoryView":712 + /* "View.MemoryView":750 * 0, 0, 0, # have_{start,stop,step} * False) * elif index is None: # <<<<<<<<<<<<<< @@ -11652,7 +13455,7 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ __pyx_t_1 = (__pyx_t_2 != 0); if (__pyx_t_1) { - /* "View.MemoryView":713 + /* "View.MemoryView":751 * False) * elif index is None: * p_dst.shape[new_ndim] = 1 # <<<<<<<<<<<<<< @@ -11661,7 +13464,7 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ */ (__pyx_v_p_dst->shape[__pyx_v_new_ndim]) = 1; - /* "View.MemoryView":714 + /* "View.MemoryView":752 * elif index is None: * p_dst.shape[new_ndim] = 1 * p_dst.strides[new_ndim] = 0 # <<<<<<<<<<<<<< @@ -11670,7 +13473,7 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ */ (__pyx_v_p_dst->strides[__pyx_v_new_ndim]) = 0; - /* "View.MemoryView":715 + /* "View.MemoryView":753 * p_dst.shape[new_ndim] = 1 * p_dst.strides[new_ndim] = 0 * p_dst.suboffsets[new_ndim] = -1 # <<<<<<<<<<<<<< @@ -11679,7 +13482,7 @@ static struct 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__Pyx_PyObject_GetAttrStr(__pyx_v_index, __pyx_n_s_start); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 718; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_9 = __Pyx_PyObject_GetAttrStr(__pyx_v_index, __pyx_n_s_start); if (unlikely(!__pyx_t_9)) __PYX_ERR(2, 756, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_9); - __pyx_t_1 = __Pyx_PyObject_IsTrue(__pyx_t_9); if (unlikely(__pyx_t_1 < 0)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 718; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_PyObject_IsTrue(__pyx_t_9); if (unlikely(__pyx_t_1 < 0)) __PYX_ERR(2, 756, __pyx_L1_error) if (!__pyx_t_1) { __Pyx_DECREF(__pyx_t_9); __pyx_t_9 = 0; } else { - __pyx_t_12 = __Pyx_PyIndex_AsSsize_t(__pyx_t_9); if (unlikely((__pyx_t_12 == (Py_ssize_t)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 718; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_12 = __Pyx_PyIndex_AsSsize_t(__pyx_t_9); if (unlikely((__pyx_t_12 == (Py_ssize_t)-1) && PyErr_Occurred())) __PYX_ERR(2, 756, __pyx_L1_error) __pyx_t_10 = __pyx_t_12; __Pyx_DECREF(__pyx_t_9); __pyx_t_9 = 0; goto __pyx_L7_bool_binop_done; @@ -11721,20 +13524,20 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ __pyx_L7_bool_binop_done:; __pyx_v_start = __pyx_t_10; - /* "View.MemoryView":719 + /* "View.MemoryView":757 * else: * start = index.start or 0 * stop = index.stop or 0 # <<<<<<<<<<<<<< * step = index.step or 0 * */ - __pyx_t_9 = __Pyx_PyObject_GetAttrStr(__pyx_v_index, __pyx_n_s_stop); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 719; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_9 = __Pyx_PyObject_GetAttrStr(__pyx_v_index, __pyx_n_s_stop); if (unlikely(!__pyx_t_9)) __PYX_ERR(2, 757, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_9); - __pyx_t_1 = __Pyx_PyObject_IsTrue(__pyx_t_9); if (unlikely(__pyx_t_1 < 0)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 719; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_PyObject_IsTrue(__pyx_t_9); if (unlikely(__pyx_t_1 < 0)) __PYX_ERR(2, 757, __pyx_L1_error) if (!__pyx_t_1) { __Pyx_DECREF(__pyx_t_9); __pyx_t_9 = 0; } else { - __pyx_t_12 = __Pyx_PyIndex_AsSsize_t(__pyx_t_9); if (unlikely((__pyx_t_12 == (Py_ssize_t)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 719; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_12 = __Pyx_PyIndex_AsSsize_t(__pyx_t_9); if (unlikely((__pyx_t_12 == (Py_ssize_t)-1) && PyErr_Occurred())) __PYX_ERR(2, 757, __pyx_L1_error) __pyx_t_10 = __pyx_t_12; __Pyx_DECREF(__pyx_t_9); __pyx_t_9 = 0; goto __pyx_L9_bool_binop_done; @@ -11743,20 +13546,20 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ __pyx_L9_bool_binop_done:; __pyx_v_stop = __pyx_t_10; - /* "View.MemoryView":720 + /* "View.MemoryView":758 * start = index.start or 0 * stop = index.stop or 0 * step = index.step or 0 # <<<<<<<<<<<<<< * * have_start = index.start is not None */ - __pyx_t_9 = __Pyx_PyObject_GetAttrStr(__pyx_v_index, __pyx_n_s_step); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 720; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_9 = __Pyx_PyObject_GetAttrStr(__pyx_v_index, __pyx_n_s_step); if (unlikely(!__pyx_t_9)) __PYX_ERR(2, 758, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_9); - __pyx_t_1 = __Pyx_PyObject_IsTrue(__pyx_t_9); if (unlikely(__pyx_t_1 < 0)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 720; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_PyObject_IsTrue(__pyx_t_9); if (unlikely(__pyx_t_1 < 0)) __PYX_ERR(2, 758, __pyx_L1_error) if (!__pyx_t_1) { __Pyx_DECREF(__pyx_t_9); __pyx_t_9 = 0; } else { - __pyx_t_12 = __Pyx_PyIndex_AsSsize_t(__pyx_t_9); if (unlikely((__pyx_t_12 == (Py_ssize_t)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 720; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_12 = __Pyx_PyIndex_AsSsize_t(__pyx_t_9); if (unlikely((__pyx_t_12 == (Py_ssize_t)-1) && PyErr_Occurred())) __PYX_ERR(2, 758, __pyx_L1_error) __pyx_t_10 = __pyx_t_12; __Pyx_DECREF(__pyx_t_9); __pyx_t_9 = 0; goto __pyx_L11_bool_binop_done; @@ -11765,55 +13568,55 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ __pyx_L11_bool_binop_done:; __pyx_v_step = __pyx_t_10; - /* "View.MemoryView":722 + /* "View.MemoryView":760 * step = index.step or 0 * * have_start = index.start is not None # <<<<<<<<<<<<<< * have_stop = index.stop is not None * have_step = index.step is not None */ - __pyx_t_9 = __Pyx_PyObject_GetAttrStr(__pyx_v_index, __pyx_n_s_start); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 722; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_9 = __Pyx_PyObject_GetAttrStr(__pyx_v_index, __pyx_n_s_start); if (unlikely(!__pyx_t_9)) __PYX_ERR(2, 760, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_9); __pyx_t_1 = (__pyx_t_9 != Py_None); __Pyx_DECREF(__pyx_t_9); __pyx_t_9 = 0; __pyx_v_have_start = __pyx_t_1; - /* "View.MemoryView":723 + /* "View.MemoryView":761 * * have_start = index.start is not None * have_stop = index.stop is not None # <<<<<<<<<<<<<< * have_step = index.step is not None * */ - __pyx_t_9 = __Pyx_PyObject_GetAttrStr(__pyx_v_index, __pyx_n_s_stop); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 723; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_9 = __Pyx_PyObject_GetAttrStr(__pyx_v_index, __pyx_n_s_stop); if (unlikely(!__pyx_t_9)) __PYX_ERR(2, 761, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_9); __pyx_t_1 = (__pyx_t_9 != Py_None); __Pyx_DECREF(__pyx_t_9); __pyx_t_9 = 0; __pyx_v_have_stop = __pyx_t_1; - /* "View.MemoryView":724 + /* "View.MemoryView":762 * have_start = index.start is not None * have_stop = index.stop is not None * have_step = index.step is not None # <<<<<<<<<<<<<< * * slice_memviewslice( */ - __pyx_t_9 = __Pyx_PyObject_GetAttrStr(__pyx_v_index, __pyx_n_s_step); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 724; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_9 = __Pyx_PyObject_GetAttrStr(__pyx_v_index, __pyx_n_s_step); if (unlikely(!__pyx_t_9)) __PYX_ERR(2, 762, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_9); __pyx_t_1 = (__pyx_t_9 != Py_None); __Pyx_DECREF(__pyx_t_9); __pyx_t_9 = 0; __pyx_v_have_step = __pyx_t_1; - /* "View.MemoryView":726 + /* "View.MemoryView":764 * have_step = index.step is not None * * slice_memviewslice( # <<<<<<<<<<<<<< * p_dst, p_src.shape[dim], p_src.strides[dim], p_src.suboffsets[dim], * dim, new_ndim, p_suboffset_dim, */ - __pyx_t_11 = __pyx_memoryview_slice_memviewslice(__pyx_v_p_dst, (__pyx_v_p_src->shape[__pyx_v_dim]), (__pyx_v_p_src->strides[__pyx_v_dim]), (__pyx_v_p_src->suboffsets[__pyx_v_dim]), __pyx_v_dim, __pyx_v_new_ndim, __pyx_v_p_suboffset_dim, __pyx_v_start, __pyx_v_stop, __pyx_v_step, __pyx_v_have_start, __pyx_v_have_stop, __pyx_v_have_step, 1); if (unlikely(__pyx_t_11 == -1)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 726; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_11 = __pyx_memoryview_slice_memviewslice(__pyx_v_p_dst, (__pyx_v_p_src->shape[__pyx_v_dim]), (__pyx_v_p_src->strides[__pyx_v_dim]), (__pyx_v_p_src->suboffsets[__pyx_v_dim]), __pyx_v_dim, __pyx_v_new_ndim, __pyx_v_p_suboffset_dim, __pyx_v_start, __pyx_v_stop, __pyx_v_step, __pyx_v_have_start, __pyx_v_have_stop, __pyx_v_have_step, 1); if (unlikely(__pyx_t_11 == ((int)-1))) __PYX_ERR(2, 764, __pyx_L1_error) - /* "View.MemoryView":732 + /* "View.MemoryView":770 * have_start, have_stop, have_step, * True) * new_ndim += 1 # <<<<<<<<<<<<<< @@ -11824,7 +13627,7 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ } __pyx_L6:; - /* "View.MemoryView":704 + /* "View.MemoryView":742 * cdef bint have_start, have_stop, have_step * * for dim, index in enumerate(indices): # <<<<<<<<<<<<<< @@ -11834,7 +13637,7 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ } __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - /* "View.MemoryView":734 + /* "View.MemoryView":772 * new_ndim += 1 * * if isinstance(memview, _memoryviewslice): # <<<<<<<<<<<<<< @@ -11845,7 +13648,7 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ __pyx_t_2 = (__pyx_t_1 != 0); if (__pyx_t_2) { - /* "View.MemoryView":735 + /* "View.MemoryView":773 * * if isinstance(memview, _memoryviewslice): * return memoryview_fromslice(dst, new_ndim, # <<<<<<<<<<<<<< @@ -11854,39 +13657,39 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ */ __Pyx_XDECREF(((PyObject *)__pyx_r)); - /* "View.MemoryView":736 + /* "View.MemoryView":774 * if isinstance(memview, _memoryviewslice): * return memoryview_fromslice(dst, new_ndim, * memviewsliceobj.to_object_func, # <<<<<<<<<<<<<< * memviewsliceobj.to_dtype_func, * memview.dtype_is_object) */ - if (unlikely(!__pyx_v_memviewsliceobj)) { __Pyx_RaiseUnboundLocalError("memviewsliceobj"); {__pyx_filename = __pyx_f[2]; __pyx_lineno = 736; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } + if (unlikely(!__pyx_v_memviewsliceobj)) { __Pyx_RaiseUnboundLocalError("memviewsliceobj"); __PYX_ERR(2, 774, __pyx_L1_error) } - /* "View.MemoryView":737 + /* "View.MemoryView":775 * return memoryview_fromslice(dst, new_ndim, * memviewsliceobj.to_object_func, * memviewsliceobj.to_dtype_func, # <<<<<<<<<<<<<< * memview.dtype_is_object) * else: */ - if (unlikely(!__pyx_v_memviewsliceobj)) { __Pyx_RaiseUnboundLocalError("memviewsliceobj"); {__pyx_filename = __pyx_f[2]; __pyx_lineno = 737; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } + if (unlikely(!__pyx_v_memviewsliceobj)) { __Pyx_RaiseUnboundLocalError("memviewsliceobj"); __PYX_ERR(2, 775, __pyx_L1_error) } - /* "View.MemoryView":735 + /* "View.MemoryView":773 * * if isinstance(memview, _memoryviewslice): * return memoryview_fromslice(dst, new_ndim, # <<<<<<<<<<<<<< * memviewsliceobj.to_object_func, * memviewsliceobj.to_dtype_func, */ - __pyx_t_3 = __pyx_memoryview_fromslice(__pyx_v_dst, __pyx_v_new_ndim, __pyx_v_memviewsliceobj->to_object_func, __pyx_v_memviewsliceobj->to_dtype_func, __pyx_v_memview->dtype_is_object); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 735; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = __pyx_memoryview_fromslice(__pyx_v_dst, __pyx_v_new_ndim, __pyx_v_memviewsliceobj->to_object_func, __pyx_v_memviewsliceobj->to_dtype_func, __pyx_v_memview->dtype_is_object); if (unlikely(!__pyx_t_3)) __PYX_ERR(2, 773, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_3); - if (!(likely(((__pyx_t_3) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_3, __pyx_memoryview_type))))) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 735; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (!(likely(((__pyx_t_3) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_3, __pyx_memoryview_type))))) __PYX_ERR(2, 773, __pyx_L1_error) __pyx_r = ((struct __pyx_memoryview_obj *)__pyx_t_3); __pyx_t_3 = 0; goto __pyx_L0; - /* "View.MemoryView":734 + /* "View.MemoryView":772 * new_ndim += 1 * * if isinstance(memview, _memoryviewslice): # <<<<<<<<<<<<<< @@ -11895,7 +13698,7 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ */ } - /* "View.MemoryView":740 + /* "View.MemoryView":778 * memview.dtype_is_object) * else: * return memoryview_fromslice(dst, new_ndim, NULL, NULL, # <<<<<<<<<<<<<< @@ -11905,30 +13708,30 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ /*else*/ { __Pyx_XDECREF(((PyObject *)__pyx_r)); - /* "View.MemoryView":741 + /* "View.MemoryView":779 * else: * return memoryview_fromslice(dst, new_ndim, NULL, NULL, * memview.dtype_is_object) # <<<<<<<<<<<<<< * * */ - __pyx_t_3 = __pyx_memoryview_fromslice(__pyx_v_dst, __pyx_v_new_ndim, NULL, NULL, __pyx_v_memview->dtype_is_object); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 740; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = __pyx_memoryview_fromslice(__pyx_v_dst, __pyx_v_new_ndim, NULL, NULL, __pyx_v_memview->dtype_is_object); if (unlikely(!__pyx_t_3)) __PYX_ERR(2, 778, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_3); - /* "View.MemoryView":740 + /* "View.MemoryView":778 * memview.dtype_is_object) * else: * return memoryview_fromslice(dst, new_ndim, NULL, NULL, # <<<<<<<<<<<<<< * memview.dtype_is_object) * */ - if (!(likely(((__pyx_t_3) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_3, __pyx_memoryview_type))))) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 740; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (!(likely(((__pyx_t_3) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_3, __pyx_memoryview_type))))) __PYX_ERR(2, 778, __pyx_L1_error) __pyx_r = ((struct __pyx_memoryview_obj *)__pyx_t_3); __pyx_t_3 = 0; goto __pyx_L0; } - /* "View.MemoryView":668 + /* "View.MemoryView":706 * * @cname('__pyx_memview_slice') * cdef memoryview memview_slice(memoryview memview, object indices): # <<<<<<<<<<<<<< @@ -11950,7 +13753,7 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ return __pyx_r; } -/* "View.MemoryView":765 +/* "View.MemoryView":803 * * @cname('__pyx_memoryview_slice_memviewslice') * cdef int slice_memviewslice( # <<<<<<<<<<<<<< @@ -11965,11 +13768,8 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, int __pyx_t_1; int __pyx_t_2; int __pyx_t_3; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; - /* "View.MemoryView":785 + /* "View.MemoryView":823 * cdef bint negative_step * * if not is_slice: # <<<<<<<<<<<<<< @@ -11979,7 +13779,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_1 = ((!(__pyx_v_is_slice != 0)) != 0); if (__pyx_t_1) { - /* "View.MemoryView":787 + /* "View.MemoryView":825 * if not is_slice: * * if start < 0: # <<<<<<<<<<<<<< @@ -11989,7 +13789,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_1 = ((__pyx_v_start < 0) != 0); if (__pyx_t_1) { - /* "View.MemoryView":788 + /* "View.MemoryView":826 * * if start < 0: * start += shape # <<<<<<<<<<<<<< @@ -11998,7 +13798,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ __pyx_v_start = (__pyx_v_start + __pyx_v_shape); - /* "View.MemoryView":787 + /* "View.MemoryView":825 * if not is_slice: * * if start < 0: # <<<<<<<<<<<<<< @@ -12007,7 +13807,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ } - /* "View.MemoryView":789 + /* "View.MemoryView":827 * if start < 0: * start += shape * if not 0 <= start < shape: # <<<<<<<<<<<<<< @@ -12021,16 +13821,16 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((!(__pyx_t_1 != 0)) != 0); if (__pyx_t_2) { - /* "View.MemoryView":790 + /* "View.MemoryView":828 * start += shape * if not 0 <= start < shape: * _err_dim(IndexError, "Index out of bounds (axis %d)", dim) # <<<<<<<<<<<<<< * else: * */ - __pyx_t_3 = __pyx_memoryview_err_dim(__pyx_builtin_IndexError, __pyx_k_Index_out_of_bounds_axis_d, __pyx_v_dim); if (unlikely(__pyx_t_3 == -1)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 790; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = __pyx_memoryview_err_dim(__pyx_builtin_IndexError, ((char *)"Index out of bounds (axis %d)"), __pyx_v_dim); if (unlikely(__pyx_t_3 == ((int)-1))) __PYX_ERR(2, 828, __pyx_L1_error) - /* "View.MemoryView":789 + /* "View.MemoryView":827 * if start < 0: * start += shape * if not 0 <= start < shape: # <<<<<<<<<<<<<< @@ -12039,7 +13839,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ } - /* "View.MemoryView":785 + /* "View.MemoryView":823 * cdef bint negative_step * * if not is_slice: # <<<<<<<<<<<<<< @@ -12049,7 +13849,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, goto __pyx_L3; } - /* "View.MemoryView":793 + /* "View.MemoryView":831 * else: * * negative_step = have_step != 0 and step < 0 # <<<<<<<<<<<<<< @@ -12068,7 +13868,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_L6_bool_binop_done:; __pyx_v_negative_step = __pyx_t_2; - /* "View.MemoryView":795 + /* "View.MemoryView":833 * negative_step = have_step != 0 and step < 0 * * if have_step and step == 0: # <<<<<<<<<<<<<< @@ -12086,16 +13886,16 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_L9_bool_binop_done:; if (__pyx_t_2) { - /* "View.MemoryView":796 + /* "View.MemoryView":834 * * if have_step and step == 0: * _err_dim(ValueError, "Step may not be zero (axis %d)", dim) # <<<<<<<<<<<<<< * * */ - __pyx_t_3 = __pyx_memoryview_err_dim(__pyx_builtin_ValueError, __pyx_k_Step_may_not_be_zero_axis_d, __pyx_v_dim); if (unlikely(__pyx_t_3 == -1)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 796; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = __pyx_memoryview_err_dim(__pyx_builtin_ValueError, ((char *)"Step may not be zero (axis %d)"), __pyx_v_dim); if (unlikely(__pyx_t_3 == ((int)-1))) __PYX_ERR(2, 834, __pyx_L1_error) - /* "View.MemoryView":795 + /* "View.MemoryView":833 * negative_step = have_step != 0 and step < 0 * * if have_step and step == 0: # <<<<<<<<<<<<<< @@ -12104,7 +13904,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ } - /* "View.MemoryView":799 + /* "View.MemoryView":837 * * * if have_start: # <<<<<<<<<<<<<< @@ -12114,7 +13914,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = (__pyx_v_have_start != 0); if (__pyx_t_2) { - /* "View.MemoryView":800 + /* "View.MemoryView":838 * * if have_start: * if start < 0: # <<<<<<<<<<<<<< @@ -12124,7 +13924,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((__pyx_v_start < 0) != 0); if (__pyx_t_2) { - /* "View.MemoryView":801 + /* "View.MemoryView":839 * if have_start: * if start < 0: * start += shape # <<<<<<<<<<<<<< @@ -12133,7 +13933,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ __pyx_v_start = (__pyx_v_start + __pyx_v_shape); - /* "View.MemoryView":802 + /* "View.MemoryView":840 * if start < 0: * start += shape * if start < 0: # <<<<<<<<<<<<<< @@ -12143,7 +13943,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((__pyx_v_start < 0) != 0); if (__pyx_t_2) { - /* "View.MemoryView":803 + /* "View.MemoryView":841 * start += shape * if start < 0: * start = 0 # <<<<<<<<<<<<<< @@ -12152,7 +13952,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ __pyx_v_start = 0; - /* "View.MemoryView":802 + /* "View.MemoryView":840 * if start < 0: * start += shape * if start < 0: # <<<<<<<<<<<<<< @@ -12161,7 +13961,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ } - /* "View.MemoryView":800 + /* "View.MemoryView":838 * * if have_start: * if start < 0: # <<<<<<<<<<<<<< @@ -12171,7 +13971,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, goto __pyx_L12; } - /* "View.MemoryView":804 + /* "View.MemoryView":842 * if start < 0: * start = 0 * elif start >= shape: # <<<<<<<<<<<<<< @@ -12181,7 +13981,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((__pyx_v_start >= __pyx_v_shape) != 0); if (__pyx_t_2) { - /* "View.MemoryView":805 + /* "View.MemoryView":843 * start = 0 * elif start >= shape: * if negative_step: # <<<<<<<<<<<<<< @@ -12191,7 +13991,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = (__pyx_v_negative_step != 0); if (__pyx_t_2) { - /* "View.MemoryView":806 + /* "View.MemoryView":844 * elif start >= shape: * if negative_step: * start = shape - 1 # <<<<<<<<<<<<<< @@ -12200,7 +14000,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ __pyx_v_start = (__pyx_v_shape - 1); - /* "View.MemoryView":805 + /* "View.MemoryView":843 * start = 0 * elif start >= shape: * if negative_step: # <<<<<<<<<<<<<< @@ -12210,7 +14010,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, goto __pyx_L14; } - /* "View.MemoryView":808 + /* "View.MemoryView":846 * start = shape - 1 * else: * start = shape # <<<<<<<<<<<<<< @@ -12222,7 +14022,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, } __pyx_L14:; - /* "View.MemoryView":804 + /* "View.MemoryView":842 * if start < 0: * start = 0 * elif start >= shape: # <<<<<<<<<<<<<< @@ -12232,7 +14032,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, } __pyx_L12:; - /* "View.MemoryView":799 + /* "View.MemoryView":837 * * * if have_start: # <<<<<<<<<<<<<< @@ -12242,7 +14042,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, goto __pyx_L11; } - /* "View.MemoryView":810 + /* "View.MemoryView":848 * start = shape * else: * if negative_step: # <<<<<<<<<<<<<< @@ -12253,7 +14053,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = (__pyx_v_negative_step != 0); if (__pyx_t_2) { - /* "View.MemoryView":811 + /* "View.MemoryView":849 * else: * if negative_step: * start = shape - 1 # <<<<<<<<<<<<<< @@ -12262,7 +14062,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ __pyx_v_start = (__pyx_v_shape - 1); - /* "View.MemoryView":810 + /* "View.MemoryView":848 * start = shape * else: * if negative_step: # <<<<<<<<<<<<<< @@ -12272,7 +14072,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, goto __pyx_L15; } - /* "View.MemoryView":813 + /* "View.MemoryView":851 * start = shape - 1 * else: * start = 0 # <<<<<<<<<<<<<< @@ -12286,7 +14086,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, } __pyx_L11:; - /* "View.MemoryView":815 + /* "View.MemoryView":853 * start = 0 * * if have_stop: # <<<<<<<<<<<<<< @@ -12296,7 +14096,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = (__pyx_v_have_stop != 0); if (__pyx_t_2) { - /* "View.MemoryView":816 + /* "View.MemoryView":854 * * if have_stop: * if stop < 0: # <<<<<<<<<<<<<< @@ -12306,7 +14106,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((__pyx_v_stop < 0) != 0); if (__pyx_t_2) { - /* "View.MemoryView":817 + /* "View.MemoryView":855 * if have_stop: * if stop < 0: * stop += shape # <<<<<<<<<<<<<< @@ -12315,7 +14115,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ __pyx_v_stop = (__pyx_v_stop + __pyx_v_shape); - /* "View.MemoryView":818 + /* "View.MemoryView":856 * if stop < 0: * stop += shape * if stop < 0: # <<<<<<<<<<<<<< @@ -12325,7 +14125,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((__pyx_v_stop < 0) != 0); if (__pyx_t_2) { - /* "View.MemoryView":819 + /* "View.MemoryView":857 * stop += shape * if stop < 0: * stop = 0 # <<<<<<<<<<<<<< @@ -12334,7 +14134,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ __pyx_v_stop = 0; - /* "View.MemoryView":818 + /* "View.MemoryView":856 * if stop < 0: * stop += shape * if stop < 0: # <<<<<<<<<<<<<< @@ -12343,7 +14143,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ } - /* "View.MemoryView":816 + /* "View.MemoryView":854 * * if have_stop: * if stop < 0: # <<<<<<<<<<<<<< @@ -12353,7 +14153,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, goto __pyx_L17; } - /* "View.MemoryView":820 + /* "View.MemoryView":858 * if stop < 0: * stop = 0 * elif stop > shape: # <<<<<<<<<<<<<< @@ -12363,7 +14163,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((__pyx_v_stop > __pyx_v_shape) != 0); if (__pyx_t_2) { - /* "View.MemoryView":821 + /* "View.MemoryView":859 * stop = 0 * elif stop > shape: * stop = shape # <<<<<<<<<<<<<< @@ -12372,7 +14172,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ __pyx_v_stop = __pyx_v_shape; - /* "View.MemoryView":820 + /* "View.MemoryView":858 * if stop < 0: * stop = 0 * elif stop > shape: # <<<<<<<<<<<<<< @@ -12382,7 +14182,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, } __pyx_L17:; - /* "View.MemoryView":815 + /* "View.MemoryView":853 * start = 0 * * if have_stop: # <<<<<<<<<<<<<< @@ -12392,7 +14192,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, goto __pyx_L16; } - /* "View.MemoryView":823 + /* "View.MemoryView":861 * stop = shape * else: * if negative_step: # <<<<<<<<<<<<<< @@ -12403,7 +14203,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = (__pyx_v_negative_step != 0); if (__pyx_t_2) { - /* "View.MemoryView":824 + /* "View.MemoryView":862 * else: * if negative_step: * stop = -1 # <<<<<<<<<<<<<< @@ -12412,7 +14212,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ __pyx_v_stop = -1L; - /* "View.MemoryView":823 + /* "View.MemoryView":861 * stop = shape * else: * if negative_step: # <<<<<<<<<<<<<< @@ -12422,7 +14222,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, goto __pyx_L19; } - /* "View.MemoryView":826 + /* "View.MemoryView":864 * stop = -1 * else: * stop = shape # <<<<<<<<<<<<<< @@ -12436,7 +14236,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, } __pyx_L16:; - /* "View.MemoryView":828 + /* "View.MemoryView":866 * stop = shape * * if not have_step: # <<<<<<<<<<<<<< @@ -12446,7 +14246,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((!(__pyx_v_have_step != 0)) != 0); if (__pyx_t_2) { - /* "View.MemoryView":829 + /* "View.MemoryView":867 * * if not have_step: * step = 1 # <<<<<<<<<<<<<< @@ -12455,7 +14255,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ __pyx_v_step = 1; - /* "View.MemoryView":828 + /* "View.MemoryView":866 * stop = shape * * if not have_step: # <<<<<<<<<<<<<< @@ -12464,7 +14264,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ } - /* "View.MemoryView":833 + /* "View.MemoryView":871 * * with cython.cdivision(True): * new_shape = (stop - start) // step # <<<<<<<<<<<<<< @@ -12473,7 +14273,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ __pyx_v_new_shape = ((__pyx_v_stop - __pyx_v_start) / __pyx_v_step); - /* "View.MemoryView":835 + /* "View.MemoryView":873 * new_shape = (stop - start) // step * * if (stop - start) - step * new_shape: # <<<<<<<<<<<<<< @@ -12483,7 +14283,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = (((__pyx_v_stop - __pyx_v_start) - (__pyx_v_step * __pyx_v_new_shape)) != 0); if (__pyx_t_2) { - /* "View.MemoryView":836 + /* "View.MemoryView":874 * * if (stop - start) - step * new_shape: * new_shape += 1 # <<<<<<<<<<<<<< @@ -12492,7 +14292,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ __pyx_v_new_shape = (__pyx_v_new_shape + 1); - /* "View.MemoryView":835 + /* "View.MemoryView":873 * new_shape = (stop - start) // step * * if (stop - start) - step * new_shape: # <<<<<<<<<<<<<< @@ -12501,7 +14301,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ } - /* "View.MemoryView":838 + /* "View.MemoryView":876 * new_shape += 1 * * if new_shape < 0: # <<<<<<<<<<<<<< @@ -12511,7 +14311,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((__pyx_v_new_shape < 0) != 0); if (__pyx_t_2) { - /* "View.MemoryView":839 + /* "View.MemoryView":877 * * if new_shape < 0: * new_shape = 0 # <<<<<<<<<<<<<< @@ -12520,7 +14320,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ __pyx_v_new_shape = 0; - /* "View.MemoryView":838 + /* "View.MemoryView":876 * new_shape += 1 * * if new_shape < 0: # <<<<<<<<<<<<<< @@ -12529,7 +14329,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ } - /* "View.MemoryView":842 + /* "View.MemoryView":880 * * * dst.strides[new_ndim] = stride * step # <<<<<<<<<<<<<< @@ -12538,7 +14338,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ (__pyx_v_dst->strides[__pyx_v_new_ndim]) = (__pyx_v_stride * __pyx_v_step); - /* "View.MemoryView":843 + /* "View.MemoryView":881 * * dst.strides[new_ndim] = stride * step * dst.shape[new_ndim] = new_shape # <<<<<<<<<<<<<< @@ -12547,7 +14347,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ (__pyx_v_dst->shape[__pyx_v_new_ndim]) = __pyx_v_new_shape; - /* "View.MemoryView":844 + /* "View.MemoryView":882 * dst.strides[new_ndim] = stride * step * dst.shape[new_ndim] = new_shape * dst.suboffsets[new_ndim] = suboffset # <<<<<<<<<<<<<< @@ -12558,7 +14358,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, } __pyx_L3:; - /* "View.MemoryView":847 + /* "View.MemoryView":885 * * * if suboffset_dim[0] < 0: # <<<<<<<<<<<<<< @@ -12568,7 +14368,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = (((__pyx_v_suboffset_dim[0]) < 0) != 0); if (__pyx_t_2) { - /* "View.MemoryView":848 + /* "View.MemoryView":886 * * if suboffset_dim[0] < 0: * dst.data += start * stride # <<<<<<<<<<<<<< @@ -12577,7 +14377,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ __pyx_v_dst->data = (__pyx_v_dst->data + (__pyx_v_start * __pyx_v_stride)); - /* "View.MemoryView":847 + /* "View.MemoryView":885 * * * if suboffset_dim[0] < 0: # <<<<<<<<<<<<<< @@ -12587,7 +14387,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, goto __pyx_L23; } - /* "View.MemoryView":850 + /* "View.MemoryView":888 * dst.data += start * stride * else: * dst.suboffsets[suboffset_dim[0]] += start * stride # <<<<<<<<<<<<<< @@ -12600,7 +14400,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, } __pyx_L23:; - /* "View.MemoryView":852 + /* "View.MemoryView":890 * dst.suboffsets[suboffset_dim[0]] += start * stride * * if suboffset >= 0: # <<<<<<<<<<<<<< @@ -12610,7 +14410,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((__pyx_v_suboffset >= 0) != 0); if (__pyx_t_2) { - /* "View.MemoryView":853 + /* "View.MemoryView":891 * * if suboffset >= 0: * if not is_slice: # <<<<<<<<<<<<<< @@ -12620,7 +14420,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((!(__pyx_v_is_slice != 0)) != 0); if (__pyx_t_2) { - /* "View.MemoryView":854 + /* "View.MemoryView":892 * if suboffset >= 0: * if not is_slice: * if new_ndim == 0: # <<<<<<<<<<<<<< @@ -12630,7 +14430,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((__pyx_v_new_ndim == 0) != 0); if (__pyx_t_2) { - /* "View.MemoryView":855 + /* "View.MemoryView":893 * if not is_slice: * if new_ndim == 0: * dst.data = ( dst.data)[0] + suboffset # <<<<<<<<<<<<<< @@ -12639,7 +14439,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ __pyx_v_dst->data = ((((char **)__pyx_v_dst->data)[0]) + __pyx_v_suboffset); - /* "View.MemoryView":854 + /* "View.MemoryView":892 * if suboffset >= 0: * if not is_slice: * if new_ndim == 0: # <<<<<<<<<<<<<< @@ -12649,7 +14449,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, goto __pyx_L26; } - /* "View.MemoryView":857 + /* "View.MemoryView":895 * dst.data = ( dst.data)[0] + suboffset * else: * _err_dim(IndexError, "All dimensions preceding dimension %d " # <<<<<<<<<<<<<< @@ -12658,18 +14458,18 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ /*else*/ { - /* "View.MemoryView":858 + /* "View.MemoryView":896 * else: * _err_dim(IndexError, "All dimensions preceding dimension %d " * "must be indexed and not sliced", dim) # <<<<<<<<<<<<<< * else: * suboffset_dim[0] = new_ndim */ - __pyx_t_3 = __pyx_memoryview_err_dim(__pyx_builtin_IndexError, __pyx_k_All_dimensions_preceding_dimensi, __pyx_v_dim); if (unlikely(__pyx_t_3 == -1)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 857; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = __pyx_memoryview_err_dim(__pyx_builtin_IndexError, ((char *)"All dimensions preceding dimension %d must be indexed and not sliced"), __pyx_v_dim); if (unlikely(__pyx_t_3 == ((int)-1))) __PYX_ERR(2, 895, __pyx_L1_error) } __pyx_L26:; - /* "View.MemoryView":853 + /* "View.MemoryView":891 * * if suboffset >= 0: * if not is_slice: # <<<<<<<<<<<<<< @@ -12679,7 +14479,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, goto __pyx_L25; } - /* "View.MemoryView":860 + /* "View.MemoryView":898 * "must be indexed and not sliced", dim) * else: * suboffset_dim[0] = new_ndim # <<<<<<<<<<<<<< @@ -12691,7 +14491,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, } __pyx_L25:; - /* "View.MemoryView":852 + /* "View.MemoryView":890 * dst.suboffsets[suboffset_dim[0]] += start * stride * * if suboffset >= 0: # <<<<<<<<<<<<<< @@ -12700,7 +14500,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ } - /* "View.MemoryView":862 + /* "View.MemoryView":900 * suboffset_dim[0] = new_ndim * * return 0 # <<<<<<<<<<<<<< @@ -12710,7 +14510,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_r = 0; goto __pyx_L0; - /* "View.MemoryView":765 + /* "View.MemoryView":803 * * @cname('__pyx_memoryview_slice_memviewslice') * cdef int slice_memviewslice( # <<<<<<<<<<<<<< @@ -12722,11 +14522,11 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_L1_error:; { #ifdef WITH_THREAD - PyGILState_STATE __pyx_gilstate_save = PyGILState_Ensure(); + PyGILState_STATE __pyx_gilstate_save = __Pyx_PyGILState_Ensure(); #endif __Pyx_AddTraceback("View.MemoryView.slice_memviewslice", __pyx_clineno, __pyx_lineno, __pyx_filename); #ifdef WITH_THREAD - PyGILState_Release(__pyx_gilstate_save); + __Pyx_PyGILState_Release(__pyx_gilstate_save); #endif } __pyx_r = -1; @@ -12734,7 +14534,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, return __pyx_r; } -/* "View.MemoryView":868 +/* "View.MemoryView":906 * * @cname('__pyx_pybuffer_index') * cdef char *pybuffer_index(Py_buffer *view, char *bufp, Py_ssize_t index, # <<<<<<<<<<<<<< @@ -12754,12 +14554,9 @@ static char *__pyx_pybuffer_index(Py_buffer *__pyx_v_view, char *__pyx_v_bufp, P int __pyx_t_2; PyObject *__pyx_t_3 = NULL; PyObject *__pyx_t_4 = NULL; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; __Pyx_RefNannySetupContext("pybuffer_index", 0); - /* "View.MemoryView":870 + /* "View.MemoryView":908 * cdef char *pybuffer_index(Py_buffer *view, char *bufp, Py_ssize_t index, * Py_ssize_t dim) except NULL: * cdef Py_ssize_t shape, stride, suboffset = -1 # <<<<<<<<<<<<<< @@ -12768,7 +14565,7 @@ static char *__pyx_pybuffer_index(Py_buffer *__pyx_v_view, char *__pyx_v_bufp, P */ __pyx_v_suboffset = -1L; - /* "View.MemoryView":871 + /* "View.MemoryView":909 * Py_ssize_t dim) except NULL: * cdef Py_ssize_t shape, stride, suboffset = -1 * cdef Py_ssize_t itemsize = view.itemsize # <<<<<<<<<<<<<< @@ -12778,7 +14575,7 @@ static char *__pyx_pybuffer_index(Py_buffer *__pyx_v_view, char *__pyx_v_bufp, P __pyx_t_1 = __pyx_v_view->itemsize; __pyx_v_itemsize = __pyx_t_1; - /* "View.MemoryView":874 + /* "View.MemoryView":912 * cdef char *resultp * * if view.ndim == 0: # <<<<<<<<<<<<<< @@ -12788,7 +14585,7 @@ static char *__pyx_pybuffer_index(Py_buffer *__pyx_v_view, char *__pyx_v_bufp, P __pyx_t_2 = ((__pyx_v_view->ndim == 0) != 0); if (__pyx_t_2) { - /* "View.MemoryView":875 + /* "View.MemoryView":913 * * if view.ndim == 0: * shape = view.len / itemsize # <<<<<<<<<<<<<< @@ -12797,15 +14594,15 @@ static char *__pyx_pybuffer_index(Py_buffer *__pyx_v_view, char *__pyx_v_bufp, P */ if (unlikely(__pyx_v_itemsize == 0)) { PyErr_SetString(PyExc_ZeroDivisionError, "integer division or modulo by zero"); - {__pyx_filename = __pyx_f[2]; __pyx_lineno = 875; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __PYX_ERR(2, 913, __pyx_L1_error) } else if (sizeof(Py_ssize_t) == sizeof(long) && (!(((Py_ssize_t)-1) > 0)) && unlikely(__pyx_v_itemsize == (Py_ssize_t)-1) && unlikely(UNARY_NEG_WOULD_OVERFLOW(__pyx_v_view->len))) { PyErr_SetString(PyExc_OverflowError, "value too large to perform division"); - {__pyx_filename = __pyx_f[2]; __pyx_lineno = 875; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __PYX_ERR(2, 913, __pyx_L1_error) } __pyx_v_shape = __Pyx_div_Py_ssize_t(__pyx_v_view->len, __pyx_v_itemsize); - /* "View.MemoryView":876 + /* "View.MemoryView":914 * if view.ndim == 0: * shape = view.len / itemsize * stride = itemsize # <<<<<<<<<<<<<< @@ -12814,7 +14611,7 @@ static char *__pyx_pybuffer_index(Py_buffer *__pyx_v_view, char *__pyx_v_bufp, P */ __pyx_v_stride = __pyx_v_itemsize; - /* "View.MemoryView":874 + /* "View.MemoryView":912 * cdef char *resultp * * if view.ndim == 0: # <<<<<<<<<<<<<< @@ -12824,7 +14621,7 @@ static char *__pyx_pybuffer_index(Py_buffer *__pyx_v_view, char *__pyx_v_bufp, P goto __pyx_L3; } - /* "View.MemoryView":878 + /* "View.MemoryView":916 * stride = itemsize * else: * shape = view.shape[dim] # <<<<<<<<<<<<<< @@ -12834,7 +14631,7 @@ static char *__pyx_pybuffer_index(Py_buffer *__pyx_v_view, char *__pyx_v_bufp, P /*else*/ { __pyx_v_shape = (__pyx_v_view->shape[__pyx_v_dim]); - /* "View.MemoryView":879 + /* "View.MemoryView":917 * else: * shape = view.shape[dim] * stride = view.strides[dim] # <<<<<<<<<<<<<< @@ -12843,7 +14640,7 @@ static char *__pyx_pybuffer_index(Py_buffer *__pyx_v_view, char *__pyx_v_bufp, P */ __pyx_v_stride = (__pyx_v_view->strides[__pyx_v_dim]); - /* "View.MemoryView":880 + /* "View.MemoryView":918 * shape = view.shape[dim] * stride = view.strides[dim] * if view.suboffsets != NULL: # <<<<<<<<<<<<<< @@ -12853,7 +14650,7 @@ static char *__pyx_pybuffer_index(Py_buffer *__pyx_v_view, char *__pyx_v_bufp, P __pyx_t_2 = ((__pyx_v_view->suboffsets != NULL) != 0); if (__pyx_t_2) { - /* "View.MemoryView":881 + /* "View.MemoryView":919 * stride = view.strides[dim] * if view.suboffsets != NULL: * suboffset = view.suboffsets[dim] # <<<<<<<<<<<<<< @@ -12862,7 +14659,7 @@ static char *__pyx_pybuffer_index(Py_buffer *__pyx_v_view, char *__pyx_v_bufp, P */ __pyx_v_suboffset = (__pyx_v_view->suboffsets[__pyx_v_dim]); - /* "View.MemoryView":880 + /* "View.MemoryView":918 * shape = view.shape[dim] * stride = view.strides[dim] * if view.suboffsets != NULL: # <<<<<<<<<<<<<< @@ -12873,7 +14670,7 @@ static char *__pyx_pybuffer_index(Py_buffer *__pyx_v_view, char *__pyx_v_bufp, P } __pyx_L3:; - /* "View.MemoryView":883 + /* "View.MemoryView":921 * suboffset = view.suboffsets[dim] * * if index < 0: # <<<<<<<<<<<<<< @@ -12883,7 +14680,7 @@ static char *__pyx_pybuffer_index(Py_buffer *__pyx_v_view, char *__pyx_v_bufp, P __pyx_t_2 = ((__pyx_v_index < 0) != 0); if (__pyx_t_2) { - /* "View.MemoryView":884 + /* "View.MemoryView":922 * * if index < 0: * index += view.shape[dim] # <<<<<<<<<<<<<< @@ -12892,7 +14689,7 @@ static char *__pyx_pybuffer_index(Py_buffer *__pyx_v_view, char *__pyx_v_bufp, P */ __pyx_v_index = (__pyx_v_index + 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__pyx_v_result->__pyx_base.view = __pyx_t_5; - /* "View.MemoryView":981 + /* "View.MemoryView":1018 * * result.view = memviewslice.memview.view * result.view.buf = memviewslice.data # <<<<<<<<<<<<<< @@ -13638,7 +15521,7 @@ static PyObject *__pyx_memoryview_fromslice(__Pyx_memviewslice __pyx_v_memviewsl */ __pyx_v_result->__pyx_base.view.buf = ((void *)__pyx_v_memviewslice.data); - /* "View.MemoryView":982 + /* "View.MemoryView":1019 * result.view = memviewslice.memview.view * result.view.buf = memviewslice.data * result.view.ndim = ndim # <<<<<<<<<<<<<< @@ -13647,7 +15530,7 @@ static PyObject *__pyx_memoryview_fromslice(__Pyx_memviewslice __pyx_v_memviewsl */ __pyx_v_result->__pyx_base.view.ndim = __pyx_v_ndim; - /* "View.MemoryView":983 + /* "View.MemoryView":1020 * result.view.buf = memviewslice.data * result.view.ndim = ndim * (<__pyx_buffer *> &result.view).obj = Py_None # <<<<<<<<<<<<<< @@ -13656,26 +15539,58 @@ static PyObject *__pyx_memoryview_fromslice(__Pyx_memviewslice 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"View.MemoryView":1023 + * Py_INCREF(Py_None) + * + * if (memviewslice.memview).flags & PyBUF_WRITABLE: # <<<<<<<<<<<<<< + * result.flags = PyBUF_RECORDS + * else: + */ + goto __pyx_L4; + } + + /* "View.MemoryView":1026 + * result.flags = PyBUF_RECORDS + * else: + * result.flags = PyBUF_RECORDS_RO # <<<<<<<<<<<<<< * * result.view.shape = result.from_slice.shape */ - __pyx_v_result->__pyx_base.flags = PyBUF_RECORDS; + /*else*/ { + __pyx_v_result->__pyx_base.flags = PyBUF_RECORDS_RO; + } + __pyx_L4:; - /* "View.MemoryView":988 - * result.flags = PyBUF_RECORDS + /* "View.MemoryView":1028 + * result.flags = PyBUF_RECORDS_RO * * result.view.shape = result.from_slice.shape # <<<<<<<<<<<<<< * result.view.strides = result.from_slice.strides @@ -13683,7 +15598,7 @@ static PyObject *__pyx_memoryview_fromslice(__Pyx_memviewslice __pyx_v_memviewsl */ __pyx_v_result->__pyx_base.view.shape = ((Py_ssize_t *)__pyx_v_result->from_slice.shape); - /* "View.MemoryView":989 + /* "View.MemoryView":1029 * * result.view.shape = result.from_slice.shape * result.view.strides = result.from_slice.strides # <<<<<<<<<<<<<< @@ -13692,7 +15607,7 @@ static PyObject *__pyx_memoryview_fromslice(__Pyx_memviewslice __pyx_v_memviewsl */ __pyx_v_result->__pyx_base.view.strides = ((Py_ssize_t *)__pyx_v_result->from_slice.strides); - /* "View.MemoryView":992 + /* "View.MemoryView":1032 * * * result.view.suboffsets = NULL # <<<<<<<<<<<<<< @@ -13701,7 +15616,7 @@ static PyObject *__pyx_memoryview_fromslice(__Pyx_memviewslice __pyx_v_memviewsl */ __pyx_v_result->__pyx_base.view.suboffsets = NULL; - /* "View.MemoryView":993 + /* "View.MemoryView":1033 * * result.view.suboffsets = NULL * for suboffset in result.from_slice.suboffsets[:ndim]: # <<<<<<<<<<<<<< @@ -13713,7 +15628,7 @@ static PyObject *__pyx_memoryview_fromslice(__Pyx_memviewslice __pyx_v_memviewsl __pyx_t_6 = __pyx_t_8; __pyx_v_suboffset = (__pyx_t_6[0]); - /* "View.MemoryView":994 + /* "View.MemoryView":1034 * result.view.suboffsets = NULL * for suboffset in result.from_slice.suboffsets[:ndim]: * if suboffset >= 0: # <<<<<<<<<<<<<< @@ -13723,7 +15638,7 @@ static PyObject *__pyx_memoryview_fromslice(__Pyx_memviewslice __pyx_v_memviewsl __pyx_t_1 = ((__pyx_v_suboffset >= 0) != 0); if (__pyx_t_1) { - /* "View.MemoryView":995 + /* "View.MemoryView":1035 * for suboffset in result.from_slice.suboffsets[:ndim]: * if suboffset >= 0: * result.view.suboffsets = result.from_slice.suboffsets # <<<<<<<<<<<<<< @@ -13732,16 +15647,16 @@ static PyObject *__pyx_memoryview_fromslice(__Pyx_memviewslice __pyx_v_memviewsl */ __pyx_v_result->__pyx_base.view.suboffsets = ((Py_ssize_t *)__pyx_v_result->from_slice.suboffsets); - /* "View.MemoryView":996 + /* "View.MemoryView":1036 * if suboffset >= 0: * result.view.suboffsets = result.from_slice.suboffsets * break # <<<<<<<<<<<<<< * * result.view.len = result.view.itemsize */ - goto __pyx_L5_break; + goto __pyx_L6_break; - /* "View.MemoryView":994 + /* "View.MemoryView":1034 * result.view.suboffsets = NULL * for suboffset in result.from_slice.suboffsets[:ndim]: * if suboffset >= 0: # <<<<<<<<<<<<<< @@ -13750,9 +15665,9 @@ static PyObject *__pyx_memoryview_fromslice(__Pyx_memviewslice __pyx_v_memviewsl */ } } - __pyx_L5_break:; + __pyx_L6_break:; - /* "View.MemoryView":998 + /* "View.MemoryView":1038 * break * * result.view.len = result.view.itemsize # <<<<<<<<<<<<<< @@ -13762,7 +15677,7 @@ static PyObject *__pyx_memoryview_fromslice(__Pyx_memviewslice __pyx_v_memviewsl __pyx_t_9 = __pyx_v_result->__pyx_base.view.itemsize; __pyx_v_result->__pyx_base.view.len = __pyx_t_9; - /* "View.MemoryView":999 + /* "View.MemoryView":1039 * * result.view.len = result.view.itemsize * for length in result.view.shape[:ndim]: # <<<<<<<<<<<<<< @@ -13772,29 +15687,29 @@ static PyObject *__pyx_memoryview_fromslice(__Pyx_memviewslice __pyx_v_memviewsl __pyx_t_7 = (__pyx_v_result->__pyx_base.view.shape + __pyx_v_ndim); for (__pyx_t_8 = __pyx_v_result->__pyx_base.view.shape; __pyx_t_8 < __pyx_t_7; __pyx_t_8++) { __pyx_t_6 = __pyx_t_8; - __pyx_t_2 = PyInt_FromSsize_t((__pyx_t_6[0])); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 999; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyInt_FromSsize_t((__pyx_t_6[0])); if (unlikely(!__pyx_t_2)) __PYX_ERR(2, 1039, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_2); __Pyx_XDECREF_SET(__pyx_v_length, __pyx_t_2); __pyx_t_2 = 0; - /* "View.MemoryView":1000 + /* "View.MemoryView":1040 * result.view.len = result.view.itemsize * for length in result.view.shape[:ndim]: * result.view.len *= length # <<<<<<<<<<<<<< * * result.to_object_func = to_object_func */ - __pyx_t_2 = PyInt_FromSsize_t(__pyx_v_result->__pyx_base.view.len); if (unlikely(!__pyx_t_2)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 1000; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = PyInt_FromSsize_t(__pyx_v_result->__pyx_base.view.len); if (unlikely(!__pyx_t_2)) __PYX_ERR(2, 1040, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_2); - __pyx_t_3 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static PyObject *__pyx_memoryview_fromslice(__Pyx_memviewslice __pyx_v_memviewsl */ __pyx_v_result->to_object_func = __pyx_v_to_object_func; - /* "View.MemoryView":1003 + /* "View.MemoryView":1043 * * result.to_object_func = to_object_func * result.to_dtype_func = to_dtype_func # <<<<<<<<<<<<<< @@ -13812,7 +15727,7 @@ static PyObject *__pyx_memoryview_fromslice(__Pyx_memviewslice __pyx_v_memviewsl */ __pyx_v_result->to_dtype_func = __pyx_v_to_dtype_func; - /* "View.MemoryView":1005 + /* "View.MemoryView":1045 * result.to_dtype_func = to_dtype_func * * return result # <<<<<<<<<<<<<< @@ -13824,7 +15739,7 @@ static PyObject *__pyx_memoryview_fromslice(__Pyx_memviewslice __pyx_v_memviewsl __pyx_r = ((PyObject *)__pyx_v_result); goto __pyx_L0; - /* "View.MemoryView":958 + /* "View.MemoryView":995 * * @cname('__pyx_memoryview_fromslice') * cdef memoryview_fromslice(__Pyx_memviewslice memviewslice, # <<<<<<<<<<<<<< @@ -13846,7 +15761,7 @@ static PyObject *__pyx_memoryview_fromslice(__Pyx_memviewslice __pyx_v_memviewsl return __pyx_r; } -/* "View.MemoryView":1008 +/* "View.MemoryView":1048 * * @cname('__pyx_memoryview_get_slice_from_memoryview') * cdef __Pyx_memviewslice *get_slice_from_memview(memoryview memview, # <<<<<<<<<<<<<< @@ -13861,12 +15776,9 @@ static __Pyx_memviewslice *__pyx_memoryview_get_slice_from_memoryview(struct __p int __pyx_t_1; int __pyx_t_2; PyObject *__pyx_t_3 = NULL; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; __Pyx_RefNannySetupContext("get_slice_from_memview", 0); - /* "View.MemoryView":1011 + /* "View.MemoryView":1051 * __Pyx_memviewslice *mslice): * cdef _memoryviewslice obj * if isinstance(memview, _memoryviewslice): # <<<<<<<<<<<<<< @@ -13877,20 +15789,20 @@ static __Pyx_memviewslice *__pyx_memoryview_get_slice_from_memoryview(struct __p __pyx_t_2 = (__pyx_t_1 != 0); if (__pyx_t_2) { - /* "View.MemoryView":1012 + /* "View.MemoryView":1052 * cdef _memoryviewslice obj * if isinstance(memview, _memoryviewslice): * obj = memview # <<<<<<<<<<<<<< * return &obj.from_slice * else: */ - if (!(likely(((((PyObject *)__pyx_v_memview)) == Py_None) || likely(__Pyx_TypeTest(((PyObject *)__pyx_v_memview), __pyx_memoryviewslice_type))))) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 1012; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (!(likely(((((PyObject *)__pyx_v_memview)) == Py_None) || likely(__Pyx_TypeTest(((PyObject *)__pyx_v_memview), __pyx_memoryviewslice_type))))) __PYX_ERR(2, 1052, __pyx_L1_error) __pyx_t_3 = ((PyObject *)__pyx_v_memview); __Pyx_INCREF(__pyx_t_3); __pyx_v_obj = ((struct __pyx_memoryviewslice_obj *)__pyx_t_3); __pyx_t_3 = 0; - /* "View.MemoryView":1013 + /* "View.MemoryView":1053 * if isinstance(memview, _memoryviewslice): * obj = memview * return &obj.from_slice # <<<<<<<<<<<<<< @@ -13900,7 +15812,7 @@ static __Pyx_memviewslice *__pyx_memoryview_get_slice_from_memoryview(struct __p __pyx_r = (&__pyx_v_obj->from_slice); goto __pyx_L0; - /* "View.MemoryView":1011 + /* "View.MemoryView":1051 * __Pyx_memviewslice *mslice): * cdef _memoryviewslice obj * if isinstance(memview, _memoryviewslice): # <<<<<<<<<<<<<< @@ -13909,7 +15821,7 @@ static __Pyx_memviewslice *__pyx_memoryview_get_slice_from_memoryview(struct __p */ } - /* "View.MemoryView":1015 + /* "View.MemoryView":1055 * return &obj.from_slice * else: * slice_copy(memview, mslice) # <<<<<<<<<<<<<< @@ -13919,7 +15831,7 @@ static __Pyx_memviewslice *__pyx_memoryview_get_slice_from_memoryview(struct __p /*else*/ { __pyx_memoryview_slice_copy(__pyx_v_memview, __pyx_v_mslice); - /* "View.MemoryView":1016 + /* "View.MemoryView":1056 * else: * slice_copy(memview, mslice) * return mslice # <<<<<<<<<<<<<< @@ -13930,7 +15842,7 @@ static __Pyx_memviewslice *__pyx_memoryview_get_slice_from_memoryview(struct __p goto __pyx_L0; } - /* "View.MemoryView":1008 + /* "View.MemoryView":1048 * * @cname('__pyx_memoryview_get_slice_from_memoryview') * cdef __Pyx_memviewslice *get_slice_from_memview(memoryview memview, # <<<<<<<<<<<<<< @@ -13941,7 +15853,7 @@ static __Pyx_memviewslice *__pyx_memoryview_get_slice_from_memoryview(struct __p /* function exit code */ __pyx_L1_error:; __Pyx_XDECREF(__pyx_t_3); - __Pyx_WriteUnraisable("View.MemoryView.get_slice_from_memview", __pyx_clineno, __pyx_lineno, __pyx_filename, 0, 0); + __Pyx_WriteUnraisable("View.MemoryView.get_slice_from_memview", __pyx_clineno, __pyx_lineno, __pyx_filename, 1, 0); __pyx_r = 0; __pyx_L0:; __Pyx_XDECREF((PyObject *)__pyx_v_obj); @@ -13949,7 +15861,7 @@ static __Pyx_memviewslice *__pyx_memoryview_get_slice_from_memoryview(struct __p return __pyx_r; } -/* "View.MemoryView":1019 +/* "View.MemoryView":1059 * * @cname('__pyx_memoryview_slice_copy') * cdef void slice_copy(memoryview memview, __Pyx_memviewslice *dst): # <<<<<<<<<<<<<< @@ -13966,10 +15878,11 @@ static void __pyx_memoryview_slice_copy(struct __pyx_memoryview_obj *__pyx_v_mem Py_ssize_t *__pyx_t_1; int __pyx_t_2; int __pyx_t_3; - Py_ssize_t __pyx_t_4; + int __pyx_t_4; + Py_ssize_t __pyx_t_5; __Pyx_RefNannySetupContext("slice_copy", 0); - /* "View.MemoryView":1023 + /* "View.MemoryView":1063 * cdef (Py_ssize_t*) shape, strides, suboffsets * * shape = memview.view.shape # <<<<<<<<<<<<<< @@ -13979,7 +15892,7 @@ static void __pyx_memoryview_slice_copy(struct __pyx_memoryview_obj *__pyx_v_mem __pyx_t_1 = __pyx_v_memview->view.shape; __pyx_v_shape = __pyx_t_1; - /* "View.MemoryView":1024 + /* "View.MemoryView":1064 * * shape = memview.view.shape * strides = memview.view.strides # <<<<<<<<<<<<<< @@ -13989,7 +15902,7 @@ static void __pyx_memoryview_slice_copy(struct __pyx_memoryview_obj *__pyx_v_mem __pyx_t_1 = __pyx_v_memview->view.strides; __pyx_v_strides = __pyx_t_1; - /* "View.MemoryView":1025 + /* "View.MemoryView":1065 * shape = memview.view.shape * strides = memview.view.strides * suboffsets = memview.view.suboffsets # <<<<<<<<<<<<<< @@ -13999,7 +15912,7 @@ static void __pyx_memoryview_slice_copy(struct __pyx_memoryview_obj *__pyx_v_mem __pyx_t_1 = __pyx_v_memview->view.suboffsets; __pyx_v_suboffsets = __pyx_t_1; - /* "View.MemoryView":1027 + /* "View.MemoryView":1067 * suboffsets = memview.view.suboffsets * * dst.memview = <__pyx_memoryview *> memview # <<<<<<<<<<<<<< @@ -14008,7 +15921,7 @@ static void __pyx_memoryview_slice_copy(struct __pyx_memoryview_obj *__pyx_v_mem */ __pyx_v_dst->memview = ((struct __pyx_memoryview_obj *)__pyx_v_memview); - /* "View.MemoryView":1028 + /* "View.MemoryView":1068 * * dst.memview = <__pyx_memoryview *> memview * dst.data = memview.view.buf # <<<<<<<<<<<<<< @@ -14017,7 +15930,7 @@ static void __pyx_memoryview_slice_copy(struct __pyx_memoryview_obj *__pyx_v_mem */ __pyx_v_dst->data = ((char *)__pyx_v_memview->view.buf); - /* "View.MemoryView":1030 + /* "View.MemoryView":1070 * dst.data = memview.view.buf * * for dim in range(memview.view.ndim): # <<<<<<<<<<<<<< @@ -14025,10 +15938,11 @@ static void __pyx_memoryview_slice_copy(struct __pyx_memoryview_obj *__pyx_v_mem * dst.strides[dim] = strides[dim] */ __pyx_t_2 = __pyx_v_memview->view.ndim; - for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) { - __pyx_v_dim = __pyx_t_3; + __pyx_t_3 = __pyx_t_2; + for (__pyx_t_4 = 0; __pyx_t_4 < __pyx_t_3; __pyx_t_4+=1) { + __pyx_v_dim = __pyx_t_4; - /* "View.MemoryView":1031 + /* "View.MemoryView":1071 * * for dim in range(memview.view.ndim): * dst.shape[dim] = shape[dim] # <<<<<<<<<<<<<< @@ -14037,7 +15951,7 @@ static void __pyx_memoryview_slice_copy(struct __pyx_memoryview_obj *__pyx_v_mem */ (__pyx_v_dst->shape[__pyx_v_dim]) = (__pyx_v_shape[__pyx_v_dim]); - /* "View.MemoryView":1032 + /* "View.MemoryView":1072 * for dim in range(memview.view.ndim): * dst.shape[dim] = shape[dim] * dst.strides[dim] = strides[dim] # <<<<<<<<<<<<<< @@ -14046,7 +15960,7 @@ static void __pyx_memoryview_slice_copy(struct __pyx_memoryview_obj *__pyx_v_mem */ (__pyx_v_dst->strides[__pyx_v_dim]) = (__pyx_v_strides[__pyx_v_dim]); - /* 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"View.MemoryView":1076 * * @cname('__pyx_memoryview_copy_object') * cdef memoryview_copy(memoryview memview): # <<<<<<<<<<<<<< @@ -14086,12 +16000,9 @@ static PyObject *__pyx_memoryview_copy_object(struct __pyx_memoryview_obj *__pyx PyObject *__pyx_r = NULL; __Pyx_RefNannyDeclarations PyObject *__pyx_t_1 = NULL; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; __Pyx_RefNannySetupContext("memoryview_copy", 0); - /* "View.MemoryView":1039 + /* "View.MemoryView":1079 * "Create a new memoryview object" * cdef __Pyx_memviewslice memviewslice * slice_copy(memview, &memviewslice) # <<<<<<<<<<<<<< @@ -14100,7 +16011,7 @@ static PyObject *__pyx_memoryview_copy_object(struct __pyx_memoryview_obj *__pyx */ __pyx_memoryview_slice_copy(__pyx_v_memview, (&__pyx_v_memviewslice)); - /* "View.MemoryView":1040 + /* "View.MemoryView":1080 * cdef __Pyx_memviewslice memviewslice * slice_copy(memview, &memviewslice) * return memoryview_copy_from_slice(memview, &memviewslice) # <<<<<<<<<<<<<< @@ -14108,13 +16019,13 @@ static PyObject *__pyx_memoryview_copy_object(struct __pyx_memoryview_obj *__pyx * @cname('__pyx_memoryview_copy_object_from_slice') */ __Pyx_XDECREF(__pyx_r); - __pyx_t_1 = __pyx_memoryview_copy_object_from_slice(__pyx_v_memview, (&__pyx_v_memviewslice)); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 1040; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __pyx_memoryview_copy_object_from_slice(__pyx_v_memview, (&__pyx_v_memviewslice)); if (unlikely(!__pyx_t_1)) __PYX_ERR(2, 1080, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_1); __pyx_r = __pyx_t_1; __pyx_t_1 = 0; goto __pyx_L0; - /* "View.MemoryView":1036 + /* "View.MemoryView":1076 * * @cname('__pyx_memoryview_copy_object') * cdef memoryview_copy(memoryview memview): # <<<<<<<<<<<<<< @@ -14133,7 +16044,7 @@ static PyObject *__pyx_memoryview_copy_object(struct __pyx_memoryview_obj *__pyx return __pyx_r; } -/* "View.MemoryView":1043 +/* "View.MemoryView":1083 * * @cname('__pyx_memoryview_copy_object_from_slice') * cdef memoryview_copy_from_slice(memoryview memview, __Pyx_memviewslice *memviewslice): # <<<<<<<<<<<<<< @@ -14151,12 +16062,9 @@ static PyObject *__pyx_memoryview_copy_object_from_slice(struct __pyx_memoryview PyObject *(*__pyx_t_3)(char *); int (*__pyx_t_4)(char *, PyObject *); PyObject *__pyx_t_5 = NULL; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; __Pyx_RefNannySetupContext("memoryview_copy_from_slice", 0); - /* "View.MemoryView":1050 + /* "View.MemoryView":1090 * cdef int (*to_dtype_func)(char *, object) except 0 * * if isinstance(memview, _memoryviewslice): # <<<<<<<<<<<<<< @@ -14167,7 +16075,7 @@ static PyObject *__pyx_memoryview_copy_object_from_slice(struct __pyx_memoryview __pyx_t_2 = (__pyx_t_1 != 0); if (__pyx_t_2) { - /* "View.MemoryView":1051 + /* "View.MemoryView":1091 * * if isinstance(memview, _memoryviewslice): * to_object_func = (<_memoryviewslice> memview).to_object_func # <<<<<<<<<<<<<< @@ -14177,7 +16085,7 @@ static PyObject *__pyx_memoryview_copy_object_from_slice(struct __pyx_memoryview __pyx_t_3 = ((struct __pyx_memoryviewslice_obj *)__pyx_v_memview)->to_object_func; __pyx_v_to_object_func = __pyx_t_3; - /* "View.MemoryView":1052 + /* "View.MemoryView":1092 * if isinstance(memview, _memoryviewslice): * to_object_func = (<_memoryviewslice> memview).to_object_func * to_dtype_func = (<_memoryviewslice> memview).to_dtype_func # <<<<<<<<<<<<<< @@ -14187,7 +16095,7 @@ static PyObject *__pyx_memoryview_copy_object_from_slice(struct __pyx_memoryview __pyx_t_4 = ((struct __pyx_memoryviewslice_obj *)__pyx_v_memview)->to_dtype_func; __pyx_v_to_dtype_func = __pyx_t_4; - /* "View.MemoryView":1050 + /* "View.MemoryView":1090 * cdef int (*to_dtype_func)(char *, object) except 0 * * if isinstance(memview, _memoryviewslice): # <<<<<<<<<<<<<< @@ -14197,7 +16105,7 @@ static PyObject *__pyx_memoryview_copy_object_from_slice(struct __pyx_memoryview goto __pyx_L3; } - /* "View.MemoryView":1054 + /* "View.MemoryView":1094 * to_dtype_func = (<_memoryviewslice> memview).to_dtype_func * else: * to_object_func = NULL # <<<<<<<<<<<<<< @@ -14207,7 +16115,7 @@ static PyObject *__pyx_memoryview_copy_object_from_slice(struct __pyx_memoryview /*else*/ { __pyx_v_to_object_func = NULL; - /* "View.MemoryView":1055 + /* "View.MemoryView":1095 * else: * to_object_func = NULL * to_dtype_func = NULL # <<<<<<<<<<<<<< @@ -14218,7 +16126,7 @@ static PyObject *__pyx_memoryview_copy_object_from_slice(struct __pyx_memoryview } __pyx_L3:; - /* "View.MemoryView":1057 + /* "View.MemoryView":1097 * to_dtype_func = NULL * * return memoryview_fromslice(memviewslice[0], memview.view.ndim, # <<<<<<<<<<<<<< @@ -14227,20 +16135,20 @@ static PyObject *__pyx_memoryview_copy_object_from_slice(struct __pyx_memoryview */ __Pyx_XDECREF(__pyx_r); - /* "View.MemoryView":1059 + /* "View.MemoryView":1099 * return memoryview_fromslice(memviewslice[0], memview.view.ndim, * to_object_func, to_dtype_func, * memview.dtype_is_object) # <<<<<<<<<<<<<< * * */ - __pyx_t_5 = __pyx_memoryview_fromslice((__pyx_v_memviewslice[0]), __pyx_v_memview->view.ndim, __pyx_v_to_object_func, __pyx_v_to_dtype_func, __pyx_v_memview->dtype_is_object); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 1057; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = __pyx_memoryview_fromslice((__pyx_v_memviewslice[0]), __pyx_v_memview->view.ndim, __pyx_v_to_object_func, __pyx_v_to_dtype_func, __pyx_v_memview->dtype_is_object); if (unlikely(!__pyx_t_5)) __PYX_ERR(2, 1097, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_5); __pyx_r = __pyx_t_5; __pyx_t_5 = 0; goto __pyx_L0; - /* "View.MemoryView":1043 + /* "View.MemoryView":1083 * * @cname('__pyx_memoryview_copy_object_from_slice') * cdef memoryview_copy_from_slice(memoryview memview, __Pyx_memviewslice *memviewslice): # <<<<<<<<<<<<<< @@ -14259,7 +16167,7 @@ static PyObject *__pyx_memoryview_copy_object_from_slice(struct __pyx_memoryview return __pyx_r; } -/* "View.MemoryView":1065 +/* "View.MemoryView":1105 * * * cdef Py_ssize_t abs_py_ssize_t(Py_ssize_t arg) nogil: # <<<<<<<<<<<<<< @@ -14271,7 +16179,7 @@ static Py_ssize_t abs_py_ssize_t(Py_ssize_t __pyx_v_arg) { Py_ssize_t __pyx_r; int __pyx_t_1; - /* "View.MemoryView":1066 + /* "View.MemoryView":1106 * * cdef Py_ssize_t abs_py_ssize_t(Py_ssize_t arg) nogil: * if arg < 0: # <<<<<<<<<<<<<< @@ -14281,7 +16189,7 @@ static Py_ssize_t abs_py_ssize_t(Py_ssize_t __pyx_v_arg) { __pyx_t_1 = ((__pyx_v_arg < 0) != 0); if (__pyx_t_1) { - /* "View.MemoryView":1067 + /* "View.MemoryView":1107 * cdef Py_ssize_t abs_py_ssize_t(Py_ssize_t arg) nogil: * if arg < 0: * return -arg # <<<<<<<<<<<<<< @@ -14291,7 +16199,7 @@ static Py_ssize_t abs_py_ssize_t(Py_ssize_t __pyx_v_arg) { __pyx_r = (-__pyx_v_arg); goto __pyx_L0; - /* "View.MemoryView":1066 + /* "View.MemoryView":1106 * * cdef Py_ssize_t abs_py_ssize_t(Py_ssize_t arg) nogil: * if arg < 0: # <<<<<<<<<<<<<< @@ -14300,7 +16208,7 @@ static Py_ssize_t abs_py_ssize_t(Py_ssize_t __pyx_v_arg) { */ } - /* "View.MemoryView":1069 + /* "View.MemoryView":1109 * return -arg * else: * return arg # <<<<<<<<<<<<<< @@ -14312,7 +16220,7 @@ static Py_ssize_t abs_py_ssize_t(Py_ssize_t __pyx_v_arg) { goto __pyx_L0; } - /* "View.MemoryView":1065 + /* "View.MemoryView":1105 * * * cdef Py_ssize_t abs_py_ssize_t(Py_ssize_t arg) nogil: # <<<<<<<<<<<<<< @@ -14325,7 +16233,7 @@ static Py_ssize_t abs_py_ssize_t(Py_ssize_t __pyx_v_arg) { return __pyx_r; } -/* "View.MemoryView":1072 +/* "View.MemoryView":1112 * * @cname('__pyx_get_best_slice_order') * cdef char get_best_order(__Pyx_memviewslice *mslice, int ndim) nogil: # <<<<<<<<<<<<<< @@ -14341,8 +16249,9 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ int __pyx_t_1; int __pyx_t_2; int __pyx_t_3; + int __pyx_t_4; - /* "View.MemoryView":1077 + /* "View.MemoryView":1117 * """ * cdef int i * cdef Py_ssize_t c_stride = 0 # <<<<<<<<<<<<<< @@ -14351,7 +16260,7 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ */ __pyx_v_c_stride = 0; - /* "View.MemoryView":1078 + /* "View.MemoryView":1118 * cdef int i * cdef Py_ssize_t c_stride = 0 * cdef Py_ssize_t f_stride = 0 # <<<<<<<<<<<<<< @@ -14360,17 +16269,17 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ */ __pyx_v_f_stride = 0; - /* "View.MemoryView":1080 + /* "View.MemoryView":1120 * cdef Py_ssize_t f_stride = 0 * * for i in range(ndim - 1, -1, -1): # <<<<<<<<<<<<<< * if mslice.shape[i] > 1: * c_stride = mslice.strides[i] */ - for (__pyx_t_1 = (__pyx_v_ndim - 1); __pyx_t_1 > -1L; __pyx_t_1-=1) { + for (__pyx_t_1 = (__pyx_v_ndim - 1); __pyx_t_1 > -1; __pyx_t_1-=1) { __pyx_v_i = __pyx_t_1; - /* "View.MemoryView":1081 + /* "View.MemoryView":1121 * * for i in range(ndim - 1, -1, -1): * if mslice.shape[i] > 1: # <<<<<<<<<<<<<< @@ -14380,7 +16289,7 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ __pyx_t_2 = (((__pyx_v_mslice->shape[__pyx_v_i]) > 1) != 0); if (__pyx_t_2) { - /* "View.MemoryView":1082 + /* "View.MemoryView":1122 * for i in range(ndim - 1, -1, -1): * if mslice.shape[i] > 1: * c_stride = mslice.strides[i] # <<<<<<<<<<<<<< @@ -14389,7 +16298,7 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ */ __pyx_v_c_stride = (__pyx_v_mslice->strides[__pyx_v_i]); - /* "View.MemoryView":1083 + /* "View.MemoryView":1123 * if mslice.shape[i] > 1: * c_stride = mslice.strides[i] * break # <<<<<<<<<<<<<< @@ -14398,7 +16307,7 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ */ goto __pyx_L4_break; - /* "View.MemoryView":1081 + /* "View.MemoryView":1121 * * for i in range(ndim - 1, -1, -1): * if mslice.shape[i] > 1: # <<<<<<<<<<<<<< @@ -14409,7 +16318,7 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ } __pyx_L4_break:; - /* "View.MemoryView":1085 + /* "View.MemoryView":1125 * break * * for i in range(ndim): # <<<<<<<<<<<<<< @@ -14417,10 +16326,11 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ * f_stride = mslice.strides[i] */ __pyx_t_1 = __pyx_v_ndim; - for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_1; __pyx_t_3+=1) { - __pyx_v_i = __pyx_t_3; + __pyx_t_3 = __pyx_t_1; + for (__pyx_t_4 = 0; __pyx_t_4 < __pyx_t_3; __pyx_t_4+=1) { + __pyx_v_i = __pyx_t_4; - /* "View.MemoryView":1086 + /* "View.MemoryView":1126 * * for i in range(ndim): * if mslice.shape[i] > 1: # <<<<<<<<<<<<<< @@ -14430,7 +16340,7 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ __pyx_t_2 = (((__pyx_v_mslice->shape[__pyx_v_i]) > 1) != 0); if (__pyx_t_2) { - /* "View.MemoryView":1087 + /* "View.MemoryView":1127 * for i in range(ndim): * if mslice.shape[i] > 1: * f_stride = mslice.strides[i] # <<<<<<<<<<<<<< @@ -14439,7 +16349,7 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ */ __pyx_v_f_stride = (__pyx_v_mslice->strides[__pyx_v_i]); - /* "View.MemoryView":1088 + /* "View.MemoryView":1128 * if mslice.shape[i] > 1: * f_stride = mslice.strides[i] * break # <<<<<<<<<<<<<< @@ -14448,7 +16358,7 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ */ goto __pyx_L7_break; - /* "View.MemoryView":1086 + /* "View.MemoryView":1126 * * for i in range(ndim): * if mslice.shape[i] > 1: # <<<<<<<<<<<<<< @@ -14459,7 +16369,7 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ } __pyx_L7_break:; - /* "View.MemoryView":1090 + /* "View.MemoryView":1130 * break * * if abs_py_ssize_t(c_stride) <= abs_py_ssize_t(f_stride): # <<<<<<<<<<<<<< @@ -14469,7 +16379,7 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ __pyx_t_2 = ((abs_py_ssize_t(__pyx_v_c_stride) <= abs_py_ssize_t(__pyx_v_f_stride)) != 0); if (__pyx_t_2) { - /* "View.MemoryView":1091 + /* "View.MemoryView":1131 * * if abs_py_ssize_t(c_stride) <= abs_py_ssize_t(f_stride): * return 'C' # <<<<<<<<<<<<<< @@ -14479,7 +16389,7 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ __pyx_r = 'C'; goto __pyx_L0; - /* "View.MemoryView":1090 + /* "View.MemoryView":1130 * break * * if abs_py_ssize_t(c_stride) <= abs_py_ssize_t(f_stride): # <<<<<<<<<<<<<< @@ -14488,7 +16398,7 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ */ } - /* "View.MemoryView":1093 + /* "View.MemoryView":1133 * return 'C' * else: * return 'F' # <<<<<<<<<<<<<< @@ -14500,7 +16410,7 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ goto __pyx_L0; } - /* "View.MemoryView":1072 + /* "View.MemoryView":1112 * * @cname('__pyx_get_best_slice_order') * cdef char get_best_order(__Pyx_memviewslice *mslice, int ndim) nogil: # <<<<<<<<<<<<<< @@ -14513,7 +16423,7 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ return __pyx_r; } -/* "View.MemoryView":1096 +/* "View.MemoryView":1136 * * @cython.cdivision(True) * cdef void _copy_strided_to_strided(char *src_data, Py_ssize_t *src_strides, # <<<<<<<<<<<<<< @@ -14532,8 +16442,9 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v int __pyx_t_3; Py_ssize_t __pyx_t_4; Py_ssize_t __pyx_t_5; + Py_ssize_t __pyx_t_6; - /* "View.MemoryView":1103 + /* "View.MemoryView":1143 * * cdef Py_ssize_t i * cdef Py_ssize_t src_extent = src_shape[0] # <<<<<<<<<<<<<< @@ -14542,7 +16453,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v */ __pyx_v_src_extent = (__pyx_v_src_shape[0]); - /* "View.MemoryView":1104 + /* "View.MemoryView":1144 * cdef Py_ssize_t i * cdef Py_ssize_t src_extent = src_shape[0] * cdef Py_ssize_t dst_extent = dst_shape[0] # <<<<<<<<<<<<<< @@ -14551,7 +16462,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v */ __pyx_v_dst_extent = (__pyx_v_dst_shape[0]); - /* "View.MemoryView":1105 + /* "View.MemoryView":1145 * cdef Py_ssize_t src_extent = src_shape[0] * cdef Py_ssize_t dst_extent = dst_shape[0] * cdef Py_ssize_t src_stride = src_strides[0] # <<<<<<<<<<<<<< @@ -14560,7 +16471,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v */ __pyx_v_src_stride = (__pyx_v_src_strides[0]); - /* "View.MemoryView":1106 + /* "View.MemoryView":1146 * cdef Py_ssize_t dst_extent = dst_shape[0] * cdef Py_ssize_t src_stride = src_strides[0] * cdef Py_ssize_t dst_stride = dst_strides[0] # <<<<<<<<<<<<<< @@ -14569,7 +16480,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v */ __pyx_v_dst_stride = (__pyx_v_dst_strides[0]); - /* "View.MemoryView":1108 + /* "View.MemoryView":1148 * cdef Py_ssize_t dst_stride = dst_strides[0] * * if ndim == 1: # <<<<<<<<<<<<<< @@ -14579,7 +16490,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v __pyx_t_1 = ((__pyx_v_ndim == 1) != 0); if (__pyx_t_1) { - /* "View.MemoryView":1109 + /* "View.MemoryView":1149 * * if ndim == 1: * if (src_stride > 0 and dst_stride > 0 and # <<<<<<<<<<<<<< @@ -14599,7 +16510,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v goto __pyx_L5_bool_binop_done; } - /* "View.MemoryView":1110 + /* "View.MemoryView":1150 * if ndim == 1: * if (src_stride > 0 and dst_stride > 0 and * src_stride == itemsize == dst_stride): # <<<<<<<<<<<<<< @@ -14614,7 +16525,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v __pyx_t_1 = __pyx_t_3; __pyx_L5_bool_binop_done:; - /* "View.MemoryView":1109 + /* "View.MemoryView":1149 * * if ndim == 1: * if (src_stride > 0 and dst_stride > 0 and # <<<<<<<<<<<<<< @@ -14623,16 +16534,16 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v */ if (__pyx_t_1) { - /* "View.MemoryView":1111 + /* "View.MemoryView":1151 * if (src_stride > 0 and dst_stride > 0 and * src_stride == itemsize == dst_stride): * memcpy(dst_data, src_data, itemsize * dst_extent) # <<<<<<<<<<<<<< * else: * for i in range(dst_extent): */ - memcpy(__pyx_v_dst_data, __pyx_v_src_data, (__pyx_v_itemsize * __pyx_v_dst_extent)); + (void)(memcpy(__pyx_v_dst_data, __pyx_v_src_data, (__pyx_v_itemsize * __pyx_v_dst_extent))); - /* "View.MemoryView":1109 + /* "View.MemoryView":1149 * * if ndim == 1: * if (src_stride > 0 and dst_stride > 0 and # <<<<<<<<<<<<<< @@ -14642,7 +16553,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v goto __pyx_L4; } - /* "View.MemoryView":1113 + /* "View.MemoryView":1153 * memcpy(dst_data, src_data, itemsize * dst_extent) * else: * for i in range(dst_extent): # <<<<<<<<<<<<<< @@ -14651,19 +16562,20 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v */ /*else*/ { __pyx_t_4 = __pyx_v_dst_extent; - for (__pyx_t_5 = 0; __pyx_t_5 < __pyx_t_4; __pyx_t_5+=1) { - __pyx_v_i = __pyx_t_5; + __pyx_t_5 = __pyx_t_4; + for (__pyx_t_6 = 0; __pyx_t_6 < __pyx_t_5; __pyx_t_6+=1) { + __pyx_v_i = __pyx_t_6; - /* "View.MemoryView":1114 + /* "View.MemoryView":1154 * else: * for i in range(dst_extent): * memcpy(dst_data, src_data, itemsize) # <<<<<<<<<<<<<< * src_data += src_stride * dst_data += dst_stride */ - memcpy(__pyx_v_dst_data, __pyx_v_src_data, __pyx_v_itemsize); + (void)(memcpy(__pyx_v_dst_data, __pyx_v_src_data, __pyx_v_itemsize)); - /* "View.MemoryView":1115 + /* "View.MemoryView":1155 * for i in range(dst_extent): * memcpy(dst_data, src_data, itemsize) * src_data += src_stride # <<<<<<<<<<<<<< @@ -14672,7 +16584,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v */ __pyx_v_src_data = (__pyx_v_src_data + __pyx_v_src_stride); - /* "View.MemoryView":1116 + /* "View.MemoryView":1156 * memcpy(dst_data, src_data, itemsize) * src_data += src_stride * dst_data += dst_stride # <<<<<<<<<<<<<< @@ -14684,7 +16596,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v } __pyx_L4:; - /* "View.MemoryView":1108 + /* "View.MemoryView":1148 * cdef Py_ssize_t dst_stride = dst_strides[0] * * if ndim == 1: # <<<<<<<<<<<<<< @@ -14694,7 +16606,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v goto __pyx_L3; } - /* "View.MemoryView":1118 + /* "View.MemoryView":1158 * dst_data += dst_stride * else: * for i in range(dst_extent): # <<<<<<<<<<<<<< @@ -14703,10 +16615,11 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v */ /*else*/ { __pyx_t_4 = __pyx_v_dst_extent; - for (__pyx_t_5 = 0; __pyx_t_5 < __pyx_t_4; __pyx_t_5+=1) { - __pyx_v_i = __pyx_t_5; + __pyx_t_5 = __pyx_t_4; + for (__pyx_t_6 = 0; __pyx_t_6 < __pyx_t_5; __pyx_t_6+=1) { + __pyx_v_i = __pyx_t_6; - /* "View.MemoryView":1119 + /* "View.MemoryView":1159 * else: * for i in range(dst_extent): * _copy_strided_to_strided(src_data, src_strides + 1, # <<<<<<<<<<<<<< @@ -14715,7 +16628,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v */ _copy_strided_to_strided(__pyx_v_src_data, (__pyx_v_src_strides + 1), __pyx_v_dst_data, (__pyx_v_dst_strides + 1), (__pyx_v_src_shape + 1), (__pyx_v_dst_shape + 1), (__pyx_v_ndim - 1), __pyx_v_itemsize); - /* "View.MemoryView":1123 + /* "View.MemoryView":1163 * src_shape + 1, dst_shape + 1, * ndim - 1, itemsize) * src_data += src_stride # <<<<<<<<<<<<<< @@ -14724,7 +16637,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v */ __pyx_v_src_data = (__pyx_v_src_data + __pyx_v_src_stride); - /* "View.MemoryView":1124 + /* "View.MemoryView":1164 * ndim - 1, itemsize) * src_data += src_stride * dst_data += dst_stride # <<<<<<<<<<<<<< @@ -14736,7 +16649,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v } __pyx_L3:; - /* "View.MemoryView":1096 + /* "View.MemoryView":1136 * * @cython.cdivision(True) * cdef void _copy_strided_to_strided(char *src_data, Py_ssize_t *src_strides, # <<<<<<<<<<<<<< @@ -14747,7 +16660,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v /* function exit code */ } -/* "View.MemoryView":1126 +/* "View.MemoryView":1166 * dst_data += dst_stride * * cdef void copy_strided_to_strided(__Pyx_memviewslice *src, # <<<<<<<<<<<<<< @@ -14757,7 +16670,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v static void copy_strided_to_strided(__Pyx_memviewslice *__pyx_v_src, __Pyx_memviewslice *__pyx_v_dst, int __pyx_v_ndim, size_t __pyx_v_itemsize) { - /* "View.MemoryView":1129 + /* "View.MemoryView":1169 * __Pyx_memviewslice *dst, * int ndim, size_t itemsize) nogil: * _copy_strided_to_strided(src.data, src.strides, dst.data, dst.strides, # <<<<<<<<<<<<<< @@ -14766,7 +16679,7 @@ static void copy_strided_to_strided(__Pyx_memviewslice *__pyx_v_src, __Pyx_memvi */ _copy_strided_to_strided(__pyx_v_src->data, __pyx_v_src->strides, __pyx_v_dst->data, __pyx_v_dst->strides, __pyx_v_src->shape, __pyx_v_dst->shape, __pyx_v_ndim, __pyx_v_itemsize); - /* "View.MemoryView":1126 + /* "View.MemoryView":1166 * dst_data += dst_stride * * cdef void copy_strided_to_strided(__Pyx_memviewslice *src, # <<<<<<<<<<<<<< @@ -14777,7 +16690,7 @@ static void copy_strided_to_strided(__Pyx_memviewslice *__pyx_v_src, __Pyx_memvi /* function exit code */ } -/* "View.MemoryView":1133 +/* "View.MemoryView":1173 * * @cname('__pyx_memoryview_slice_get_size') * cdef Py_ssize_t slice_get_size(__Pyx_memviewslice *src, int ndim) nogil: # <<<<<<<<<<<<<< @@ -14792,8 +16705,9 @@ static Py_ssize_t __pyx_memoryview_slice_get_size(__Pyx_memviewslice *__pyx_v_sr Py_ssize_t __pyx_t_1; int __pyx_t_2; int __pyx_t_3; + int __pyx_t_4; - /* "View.MemoryView":1136 + /* "View.MemoryView":1176 * "Return the size of the memory occupied by the slice in number of bytes" * cdef int i * cdef Py_ssize_t size = src.memview.view.itemsize # <<<<<<<<<<<<<< @@ -14803,7 +16717,7 @@ static Py_ssize_t __pyx_memoryview_slice_get_size(__Pyx_memviewslice *__pyx_v_sr __pyx_t_1 = __pyx_v_src->memview->view.itemsize; __pyx_v_size = __pyx_t_1; - /* "View.MemoryView":1138 + /* "View.MemoryView":1178 * cdef Py_ssize_t size = src.memview.view.itemsize * * for i in range(ndim): # <<<<<<<<<<<<<< @@ -14811,10 +16725,11 @@ static Py_ssize_t __pyx_memoryview_slice_get_size(__Pyx_memviewslice *__pyx_v_sr * */ __pyx_t_2 = __pyx_v_ndim; - for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) { - __pyx_v_i = __pyx_t_3; + __pyx_t_3 = __pyx_t_2; + for (__pyx_t_4 = 0; __pyx_t_4 < __pyx_t_3; __pyx_t_4+=1) { + __pyx_v_i = __pyx_t_4; - /* "View.MemoryView":1139 + /* "View.MemoryView":1179 * * for i in range(ndim): * size *= src.shape[i] # <<<<<<<<<<<<<< @@ -14824,7 +16739,7 @@ static Py_ssize_t __pyx_memoryview_slice_get_size(__Pyx_memviewslice *__pyx_v_sr __pyx_v_size = (__pyx_v_size * (__pyx_v_src->shape[__pyx_v_i])); } - /* "View.MemoryView":1141 + /* "View.MemoryView":1181 * size *= src.shape[i] * * return size # <<<<<<<<<<<<<< @@ -14834,7 +16749,7 @@ static Py_ssize_t __pyx_memoryview_slice_get_size(__Pyx_memviewslice *__pyx_v_sr __pyx_r = __pyx_v_size; goto __pyx_L0; - /* "View.MemoryView":1133 + /* "View.MemoryView":1173 * * @cname('__pyx_memoryview_slice_get_size') * cdef Py_ssize_t slice_get_size(__Pyx_memviewslice *src, int ndim) nogil: # <<<<<<<<<<<<<< @@ -14847,7 +16762,7 @@ static Py_ssize_t __pyx_memoryview_slice_get_size(__Pyx_memviewslice *__pyx_v_sr return __pyx_r; } -/* "View.MemoryView":1144 +/* "View.MemoryView":1184 * * @cname('__pyx_fill_contig_strides_array') * cdef Py_ssize_t fill_contig_strides_array( # <<<<<<<<<<<<<< @@ -14861,8 +16776,9 @@ static Py_ssize_t __pyx_fill_contig_strides_array(Py_ssize_t *__pyx_v_shape, Py_ int __pyx_t_1; int __pyx_t_2; int __pyx_t_3; + int __pyx_t_4; - /* "View.MemoryView":1153 + /* "View.MemoryView":1193 * cdef int idx * * if order == 'F': # <<<<<<<<<<<<<< @@ -14872,7 +16788,7 @@ static Py_ssize_t __pyx_fill_contig_strides_array(Py_ssize_t *__pyx_v_shape, Py_ __pyx_t_1 = ((__pyx_v_order == 'F') != 0); if (__pyx_t_1) { - /* "View.MemoryView":1154 + /* "View.MemoryView":1194 * * if order == 'F': * for idx in range(ndim): # <<<<<<<<<<<<<< @@ -14880,10 +16796,11 @@ static Py_ssize_t __pyx_fill_contig_strides_array(Py_ssize_t *__pyx_v_shape, Py_ * stride = stride * shape[idx] */ __pyx_t_2 = __pyx_v_ndim; - for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) { - __pyx_v_idx = __pyx_t_3; + __pyx_t_3 = __pyx_t_2; + for (__pyx_t_4 = 0; __pyx_t_4 < __pyx_t_3; __pyx_t_4+=1) { + __pyx_v_idx = __pyx_t_4; - /* "View.MemoryView":1155 + /* "View.MemoryView":1195 * if order == 'F': * for idx in range(ndim): * strides[idx] = stride # <<<<<<<<<<<<<< @@ -14892,7 +16809,7 @@ static Py_ssize_t __pyx_fill_contig_strides_array(Py_ssize_t *__pyx_v_shape, Py_ */ (__pyx_v_strides[__pyx_v_idx]) = __pyx_v_stride; - /* "View.MemoryView":1156 + /* "View.MemoryView":1196 * for idx in range(ndim): * strides[idx] = stride * stride = stride * shape[idx] # <<<<<<<<<<<<<< @@ -14902,7 +16819,7 @@ static Py_ssize_t __pyx_fill_contig_strides_array(Py_ssize_t *__pyx_v_shape, Py_ __pyx_v_stride = (__pyx_v_stride * (__pyx_v_shape[__pyx_v_idx])); } - /* "View.MemoryView":1153 + /* "View.MemoryView":1193 * cdef int idx * * if order == 'F': # <<<<<<<<<<<<<< @@ -14912,7 +16829,7 @@ static Py_ssize_t __pyx_fill_contig_strides_array(Py_ssize_t *__pyx_v_shape, Py_ goto __pyx_L3; } - /* "View.MemoryView":1158 + /* "View.MemoryView":1198 * stride = stride * shape[idx] * else: * for idx in range(ndim - 1, -1, -1): # <<<<<<<<<<<<<< @@ -14920,10 +16837,10 @@ static Py_ssize_t __pyx_fill_contig_strides_array(Py_ssize_t *__pyx_v_shape, Py_ * stride = stride * shape[idx] */ /*else*/ { - for (__pyx_t_2 = (__pyx_v_ndim - 1); __pyx_t_2 > -1L; __pyx_t_2-=1) { + for (__pyx_t_2 = (__pyx_v_ndim - 1); __pyx_t_2 > -1; __pyx_t_2-=1) { __pyx_v_idx = __pyx_t_2; - /* "View.MemoryView":1159 + /* "View.MemoryView":1199 * else: * for idx in range(ndim - 1, -1, -1): * strides[idx] = stride # <<<<<<<<<<<<<< @@ -14932,7 +16849,7 @@ static Py_ssize_t __pyx_fill_contig_strides_array(Py_ssize_t *__pyx_v_shape, Py_ */ (__pyx_v_strides[__pyx_v_idx]) = __pyx_v_stride; - /* "View.MemoryView":1160 + /* "View.MemoryView":1200 * for idx in range(ndim - 1, -1, -1): * strides[idx] = stride * stride = stride * shape[idx] # <<<<<<<<<<<<<< @@ -14944,7 +16861,7 @@ static Py_ssize_t __pyx_fill_contig_strides_array(Py_ssize_t *__pyx_v_shape, Py_ } __pyx_L3:; - /* "View.MemoryView":1162 + /* "View.MemoryView":1202 * stride = stride * shape[idx] * * return stride # <<<<<<<<<<<<<< @@ -14954,7 +16871,7 @@ static Py_ssize_t __pyx_fill_contig_strides_array(Py_ssize_t *__pyx_v_shape, Py_ __pyx_r = __pyx_v_stride; goto __pyx_L0; - /* "View.MemoryView":1144 + /* "View.MemoryView":1184 * * @cname('__pyx_fill_contig_strides_array') * cdef Py_ssize_t fill_contig_strides_array( # <<<<<<<<<<<<<< @@ -14967,7 +16884,7 @@ static Py_ssize_t __pyx_fill_contig_strides_array(Py_ssize_t *__pyx_v_shape, Py_ return __pyx_r; } -/* "View.MemoryView":1165 +/* "View.MemoryView":1205 * * @cname('__pyx_memoryview_copy_data_to_temp') * cdef void *copy_data_to_temp(__Pyx_memviewslice *src, # <<<<<<<<<<<<<< @@ -14986,11 +16903,9 @@ static void *__pyx_memoryview_copy_data_to_temp(__Pyx_memviewslice *__pyx_v_src, int __pyx_t_3; struct __pyx_memoryview_obj *__pyx_t_4; int __pyx_t_5; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; + int __pyx_t_6; - /* "View.MemoryView":1176 + /* "View.MemoryView":1216 * cdef void *result * * cdef size_t itemsize = src.memview.view.itemsize # <<<<<<<<<<<<<< @@ -15000,7 +16915,7 @@ static void *__pyx_memoryview_copy_data_to_temp(__Pyx_memviewslice *__pyx_v_src, __pyx_t_1 = __pyx_v_src->memview->view.itemsize; __pyx_v_itemsize = __pyx_t_1; - /* "View.MemoryView":1177 + /* "View.MemoryView":1217 * * cdef size_t itemsize = src.memview.view.itemsize * cdef size_t size = slice_get_size(src, ndim) # <<<<<<<<<<<<<< @@ -15009,7 +16924,7 @@ static void *__pyx_memoryview_copy_data_to_temp(__Pyx_memviewslice *__pyx_v_src, */ __pyx_v_size = __pyx_memoryview_slice_get_size(__pyx_v_src, __pyx_v_ndim); - /* "View.MemoryView":1179 + /* "View.MemoryView":1219 * cdef size_t size = slice_get_size(src, ndim) * * result = malloc(size) # <<<<<<<<<<<<<< @@ -15018,7 +16933,7 @@ static void *__pyx_memoryview_copy_data_to_temp(__Pyx_memviewslice *__pyx_v_src, */ __pyx_v_result = malloc(__pyx_v_size); - /* "View.MemoryView":1180 + /* "View.MemoryView":1220 * * result = malloc(size) * if not result: # <<<<<<<<<<<<<< @@ -15028,16 +16943,16 @@ static void *__pyx_memoryview_copy_data_to_temp(__Pyx_memviewslice *__pyx_v_src, __pyx_t_2 = ((!(__pyx_v_result != 0)) != 0); if (__pyx_t_2) { - /* "View.MemoryView":1181 + /* "View.MemoryView":1221 * result = malloc(size) * if not result: * _err(MemoryError, NULL) # <<<<<<<<<<<<<< * * */ - __pyx_t_3 = __pyx_memoryview_err(__pyx_builtin_MemoryError, NULL); if (unlikely(__pyx_t_3 == -1)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 1181; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = __pyx_memoryview_err(__pyx_builtin_MemoryError, NULL); if (unlikely(__pyx_t_3 == ((int)-1))) __PYX_ERR(2, 1221, __pyx_L1_error) - /* "View.MemoryView":1180 + /* "View.MemoryView":1220 * * result = malloc(size) * if not result: # <<<<<<<<<<<<<< @@ -15046,7 +16961,7 @@ static void *__pyx_memoryview_copy_data_to_temp(__Pyx_memviewslice *__pyx_v_src, */ } - /* "View.MemoryView":1184 + /* "View.MemoryView":1224 * * * tmpslice.data = result # <<<<<<<<<<<<<< @@ -15055,7 +16970,7 @@ static void *__pyx_memoryview_copy_data_to_temp(__Pyx_memviewslice *__pyx_v_src, */ __pyx_v_tmpslice->data = ((char *)__pyx_v_result); - /* "View.MemoryView":1185 + /* "View.MemoryView":1225 * * tmpslice.data = result * tmpslice.memview = src.memview # <<<<<<<<<<<<<< @@ -15065,7 +16980,7 @@ static void *__pyx_memoryview_copy_data_to_temp(__Pyx_memviewslice *__pyx_v_src, __pyx_t_4 = __pyx_v_src->memview; __pyx_v_tmpslice->memview = __pyx_t_4; - /* "View.MemoryView":1186 + /* "View.MemoryView":1226 * tmpslice.data = result * tmpslice.memview = src.memview * for i in range(ndim): # <<<<<<<<<<<<<< @@ -15073,10 +16988,11 @@ static void *__pyx_memoryview_copy_data_to_temp(__Pyx_memviewslice *__pyx_v_src, * tmpslice.suboffsets[i] = -1 */ __pyx_t_3 = __pyx_v_ndim; - for (__pyx_t_5 = 0; __pyx_t_5 < __pyx_t_3; __pyx_t_5+=1) { - __pyx_v_i = __pyx_t_5; + __pyx_t_5 = __pyx_t_3; + for (__pyx_t_6 = 0; __pyx_t_6 < __pyx_t_5; __pyx_t_6+=1) { + __pyx_v_i = __pyx_t_6; - /* "View.MemoryView":1187 + /* "View.MemoryView":1227 * tmpslice.memview = src.memview * for i in range(ndim): * tmpslice.shape[i] = src.shape[i] # <<<<<<<<<<<<<< @@ -15085,7 +17001,7 @@ static void *__pyx_memoryview_copy_data_to_temp(__Pyx_memviewslice *__pyx_v_src, */ (__pyx_v_tmpslice->shape[__pyx_v_i]) = (__pyx_v_src->shape[__pyx_v_i]); - /* "View.MemoryView":1188 + /* "View.MemoryView":1228 * for i in range(ndim): * tmpslice.shape[i] = src.shape[i] * tmpslice.suboffsets[i] = -1 # <<<<<<<<<<<<<< @@ -15095,16 +17011,16 @@ static void *__pyx_memoryview_copy_data_to_temp(__Pyx_memviewslice *__pyx_v_src, (__pyx_v_tmpslice->suboffsets[__pyx_v_i]) = -1L; } - /* "View.MemoryView":1190 + /* "View.MemoryView":1230 * tmpslice.suboffsets[i] = -1 * * fill_contig_strides_array(&tmpslice.shape[0], &tmpslice.strides[0], itemsize, # <<<<<<<<<<<<<< * ndim, order) * */ - __pyx_fill_contig_strides_array((&(__pyx_v_tmpslice->shape[0])), (&(__pyx_v_tmpslice->strides[0])), __pyx_v_itemsize, __pyx_v_ndim, __pyx_v_order); + (void)(__pyx_fill_contig_strides_array((&(__pyx_v_tmpslice->shape[0])), (&(__pyx_v_tmpslice->strides[0])), __pyx_v_itemsize, __pyx_v_ndim, __pyx_v_order)); - /* "View.MemoryView":1194 + /* "View.MemoryView":1234 * * * for i in range(ndim): # <<<<<<<<<<<<<< @@ -15112,10 +17028,11 @@ static void *__pyx_memoryview_copy_data_to_temp(__Pyx_memviewslice *__pyx_v_src, * tmpslice.strides[i] = 0 */ __pyx_t_3 = __pyx_v_ndim; - for (__pyx_t_5 = 0; __pyx_t_5 < __pyx_t_3; __pyx_t_5+=1) { - __pyx_v_i = __pyx_t_5; + __pyx_t_5 = __pyx_t_3; + for (__pyx_t_6 = 0; __pyx_t_6 < __pyx_t_5; __pyx_t_6+=1) { + __pyx_v_i = __pyx_t_6; - /* "View.MemoryView":1195 + /* "View.MemoryView":1235 * * for i in range(ndim): * if tmpslice.shape[i] == 1: # <<<<<<<<<<<<<< @@ -15125,16 +17042,16 @@ static void *__pyx_memoryview_copy_data_to_temp(__Pyx_memviewslice *__pyx_v_src, __pyx_t_2 = (((__pyx_v_tmpslice->shape[__pyx_v_i]) == 1) != 0); if (__pyx_t_2) { - /* "View.MemoryView":1196 + /* "View.MemoryView":1236 * for i in range(ndim): * if tmpslice.shape[i] == 1: * tmpslice.strides[i] = 0 # <<<<<<<<<<<<<< * - * if slice_is_contig(src, order, ndim): + * if slice_is_contig(src[0], order, ndim): */ (__pyx_v_tmpslice->strides[__pyx_v_i]) = 0; - /* "View.MemoryView":1195 + /* "View.MemoryView":1235 * * for i in range(ndim): * if tmpslice.shape[i] == 1: # <<<<<<<<<<<<<< @@ -15144,36 +17061,36 @@ static void *__pyx_memoryview_copy_data_to_temp(__Pyx_memviewslice *__pyx_v_src, } } - /* "View.MemoryView":1198 + /* "View.MemoryView":1238 * tmpslice.strides[i] = 0 * - * if slice_is_contig(src, order, ndim): # <<<<<<<<<<<<<< + * if slice_is_contig(src[0], order, ndim): # <<<<<<<<<<<<<< * memcpy(result, src.data, size) * else: */ - __pyx_t_2 = (__pyx_memviewslice_is_contig(__pyx_v_src, __pyx_v_order, __pyx_v_ndim) != 0); + __pyx_t_2 = (__pyx_memviewslice_is_contig((__pyx_v_src[0]), __pyx_v_order, __pyx_v_ndim) != 0); if (__pyx_t_2) { - /* "View.MemoryView":1199 + /* "View.MemoryView":1239 * - * if slice_is_contig(src, order, ndim): + * if slice_is_contig(src[0], order, ndim): * memcpy(result, src.data, size) # <<<<<<<<<<<<<< * else: * copy_strided_to_strided(src, tmpslice, ndim, itemsize) */ - memcpy(__pyx_v_result, __pyx_v_src->data, 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__pyx_v_src_ndim); - /* "View.MemoryView":1243 + /* "View.MemoryView":1283 * if src_ndim < dst_ndim: * broadcast_leading(&src, src_ndim, dst_ndim) * elif dst_ndim < src_ndim: # <<<<<<<<<<<<<< @@ -15663,7 +17540,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ } __pyx_L3:; - /* "View.MemoryView":1246 + /* "View.MemoryView":1286 * broadcast_leading(&dst, dst_ndim, src_ndim) * * cdef int ndim = max(src_ndim, dst_ndim) # <<<<<<<<<<<<<< @@ -15679,7 +17556,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ } __pyx_v_ndim = __pyx_t_5; - /* "View.MemoryView":1248 + /* "View.MemoryView":1288 * cdef int ndim = max(src_ndim, dst_ndim) * * for i in range(ndim): # <<<<<<<<<<<<<< @@ -15687,10 +17564,11 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ * if src.shape[i] == 1: */ __pyx_t_5 = __pyx_v_ndim; - for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_5; __pyx_t_3+=1) { - __pyx_v_i = __pyx_t_3; + 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0); if (__pyx_t_2) { - /* "View.MemoryView":1257 + /* "View.MemoryView":1297 * * if src.suboffsets[i] >= 0: * _err_dim(ValueError, "Dimension %d is not direct", i) # <<<<<<<<<<<<<< * * if slices_overlap(&src, &dst, ndim, itemsize): */ - __pyx_t_4 = __pyx_memoryview_err_dim(__pyx_builtin_ValueError, __pyx_k_Dimension_d_is_not_direct, __pyx_v_i); if (unlikely(__pyx_t_4 == -1)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 1257; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_6 = __pyx_memoryview_err_dim(__pyx_builtin_ValueError, ((char *)"Dimension %d is not direct"), __pyx_v_i); if (unlikely(__pyx_t_6 == ((int)-1))) __PYX_ERR(2, 1297, __pyx_L1_error) - /* "View.MemoryView":1256 + /* "View.MemoryView":1296 * _err_extents(i, dst.shape[i], src.shape[i]) * * if src.suboffsets[i] >= 0: # <<<<<<<<<<<<<< @@ -15788,55 +17666,55 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ } } - /* "View.MemoryView":1259 + /* "View.MemoryView":1299 * 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order = get_best_order(&dst, ndim) # <<<<<<<<<<<<<< * * tmpdata = copy_data_to_temp(&src, &tmp, order, ndim) */ __pyx_v_order = __pyx_get_best_slice_order((&__pyx_v_dst), __pyx_v_ndim); - /* "View.MemoryView":1261 + /* "View.MemoryView":1301 * if slices_overlap(&src, &dst, ndim, itemsize): * - * if not slice_is_contig(&src, order, ndim): # <<<<<<<<<<<<<< + * if not slice_is_contig(src, order, ndim): # <<<<<<<<<<<<<< * order = get_best_order(&dst, ndim) * */ } - /* "View.MemoryView":1264 + /* "View.MemoryView":1304 * order = get_best_order(&dst, ndim) * * tmpdata = copy_data_to_temp(&src, &tmp, order, ndim) # <<<<<<<<<<<<<< * src = tmp * */ - __pyx_t_6 = __pyx_memoryview_copy_data_to_temp((&__pyx_v_src), (&__pyx_v_tmp), __pyx_v_order, __pyx_v_ndim); if (unlikely(__pyx_t_6 == NULL)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 1264; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_v_tmpdata = __pyx_t_6; + __pyx_t_7 = __pyx_memoryview_copy_data_to_temp((&__pyx_v_src), (&__pyx_v_tmp), __pyx_v_order, __pyx_v_ndim); if (unlikely(__pyx_t_7 == ((void *)NULL))) __PYX_ERR(2, 1304, __pyx_L1_error) + __pyx_v_tmpdata = __pyx_t_7; - /* "View.MemoryView":1265 + /* "View.MemoryView":1305 * * tmpdata = copy_data_to_temp(&src, &tmp, order, ndim) * src = tmp # <<<<<<<<<<<<<< @@ -15845,16 +17723,16 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ */ __pyx_v_src = __pyx_v_tmp; - /* "View.MemoryView":1259 + /* "View.MemoryView":1299 * _err_dim(ValueError, "Dimension %d is not direct", i) * * if slices_overlap(&src, &dst, ndim, itemsize): # <<<<<<<<<<<<<< * - * if not slice_is_contig(&src, order, ndim): + * if not slice_is_contig(src, order, ndim): */ } - /* "View.MemoryView":1267 + /* "View.MemoryView":1307 * src = tmp * * if not broadcasting: # <<<<<<<<<<<<<< @@ -15864,66 +17742,66 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ __pyx_t_2 = ((!(__pyx_v_broadcasting != 0)) != 0); if (__pyx_t_2) { - /* "View.MemoryView":1270 + /* "View.MemoryView":1310 * * - * if slice_is_contig(&src, 'C', ndim): # <<<<<<<<<<<<<< - * direct_copy = slice_is_contig(&dst, 'C', ndim) - * elif slice_is_contig(&src, 'F', ndim): + * if slice_is_contig(src, 'C', ndim): # <<<<<<<<<<<<<< + * direct_copy = slice_is_contig(dst, 'C', ndim) + * elif slice_is_contig(src, 'F', ndim): */ - __pyx_t_2 = (__pyx_memviewslice_is_contig((&__pyx_v_src), 'C', __pyx_v_ndim) != 0); + __pyx_t_2 = (__pyx_memviewslice_is_contig(__pyx_v_src, 'C', __pyx_v_ndim) != 0); if (__pyx_t_2) { - /* "View.MemoryView":1271 + /* "View.MemoryView":1311 * - * if slice_is_contig(&src, 'C', ndim): - * direct_copy = slice_is_contig(&dst, 'C', ndim) # <<<<<<<<<<<<<< - * elif slice_is_contig(&src, 'F', ndim): - * direct_copy = slice_is_contig(&dst, 'F', ndim) + * if slice_is_contig(src, 'C', ndim): + * direct_copy = slice_is_contig(dst, 'C', ndim) # <<<<<<<<<<<<<< + * elif slice_is_contig(src, 'F', ndim): + * direct_copy = slice_is_contig(dst, 'F', ndim) */ - __pyx_v_direct_copy = __pyx_memviewslice_is_contig((&__pyx_v_dst), 'C', __pyx_v_ndim); + __pyx_v_direct_copy = __pyx_memviewslice_is_contig(__pyx_v_dst, 'C', __pyx_v_ndim); - /* "View.MemoryView":1270 + /* "View.MemoryView":1310 * * - * if slice_is_contig(&src, 'C', ndim): # <<<<<<<<<<<<<< - * direct_copy = slice_is_contig(&dst, 'C', ndim) - * elif slice_is_contig(&src, 'F', ndim): + * if slice_is_contig(src, 'C', ndim): # <<<<<<<<<<<<<< + * direct_copy = slice_is_contig(dst, 'C', ndim) + * elif slice_is_contig(src, 'F', ndim): */ goto __pyx_L12; } - /* "View.MemoryView":1272 - * if slice_is_contig(&src, 'C', ndim): - * direct_copy = slice_is_contig(&dst, 'C', ndim) - * elif slice_is_contig(&src, 'F', ndim): # <<<<<<<<<<<<<< - * direct_copy = slice_is_contig(&dst, 'F', ndim) + /* "View.MemoryView":1312 + * if slice_is_contig(src, 'C', ndim): + * direct_copy = slice_is_contig(dst, 'C', ndim) + * elif slice_is_contig(src, 'F', ndim): # <<<<<<<<<<<<<< + * direct_copy = slice_is_contig(dst, 'F', ndim) * */ - __pyx_t_2 = (__pyx_memviewslice_is_contig((&__pyx_v_src), 'F', __pyx_v_ndim) != 0); + __pyx_t_2 = (__pyx_memviewslice_is_contig(__pyx_v_src, 'F', __pyx_v_ndim) != 0); if (__pyx_t_2) { - /* "View.MemoryView":1273 - * direct_copy = slice_is_contig(&dst, 'C', ndim) - * elif slice_is_contig(&src, 'F', ndim): - * direct_copy = slice_is_contig(&dst, 'F', ndim) # <<<<<<<<<<<<<< + /* "View.MemoryView":1313 + * direct_copy = slice_is_contig(dst, 'C', ndim) + * elif slice_is_contig(src, 'F', ndim): + * direct_copy = slice_is_contig(dst, 'F', ndim) # <<<<<<<<<<<<<< * * if direct_copy: */ - __pyx_v_direct_copy = __pyx_memviewslice_is_contig((&__pyx_v_dst), 'F', __pyx_v_ndim); + __pyx_v_direct_copy = __pyx_memviewslice_is_contig(__pyx_v_dst, 'F', __pyx_v_ndim); - /* "View.MemoryView":1272 - * if slice_is_contig(&src, 'C', ndim): - * direct_copy = slice_is_contig(&dst, 'C', ndim) - * elif slice_is_contig(&src, 'F', ndim): # <<<<<<<<<<<<<< - * direct_copy = slice_is_contig(&dst, 'F', ndim) + /* "View.MemoryView":1312 + * if slice_is_contig(src, 'C', ndim): + * direct_copy = slice_is_contig(dst, 'C', ndim) + * elif slice_is_contig(src, 'F', ndim): # <<<<<<<<<<<<<< + * direct_copy = slice_is_contig(dst, 'F', ndim) * */ } __pyx_L12:; - /* "View.MemoryView":1275 - * direct_copy = slice_is_contig(&dst, 'F', ndim) + /* "View.MemoryView":1315 + * direct_copy = slice_is_contig(dst, 'F', ndim) * * if direct_copy: # <<<<<<<<<<<<<< * @@ -15932,7 +17810,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ __pyx_t_2 = (__pyx_v_direct_copy != 0); if (__pyx_t_2) { - /* "View.MemoryView":1277 + /* "View.MemoryView":1317 * if direct_copy: * * refcount_copying(&dst, dtype_is_object, ndim, False) # <<<<<<<<<<<<<< @@ -15941,16 +17819,16 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ */ __pyx_memoryview_refcount_copying((&__pyx_v_dst), __pyx_v_dtype_is_object, __pyx_v_ndim, 0); - /* "View.MemoryView":1278 + /* "View.MemoryView":1318 * * refcount_copying(&dst, dtype_is_object, ndim, False) * memcpy(dst.data, src.data, slice_get_size(&src, ndim)) # <<<<<<<<<<<<<< * refcount_copying(&dst, dtype_is_object, ndim, True) * free(tmpdata) */ - memcpy(__pyx_v_dst.data, __pyx_v_src.data, __pyx_memoryview_slice_get_size((&__pyx_v_src), __pyx_v_ndim)); + (void)(memcpy(__pyx_v_dst.data, __pyx_v_src.data, __pyx_memoryview_slice_get_size((&__pyx_v_src), __pyx_v_ndim))); - /* "View.MemoryView":1279 + /* "View.MemoryView":1319 * refcount_copying(&dst, dtype_is_object, ndim, False) * memcpy(dst.data, src.data, slice_get_size(&src, ndim)) * refcount_copying(&dst, dtype_is_object, ndim, True) # <<<<<<<<<<<<<< @@ -15959,7 +17837,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ */ __pyx_memoryview_refcount_copying((&__pyx_v_dst), __pyx_v_dtype_is_object, __pyx_v_ndim, 1); - /* "View.MemoryView":1280 + /* "View.MemoryView":1320 * memcpy(dst.data, src.data, slice_get_size(&src, ndim)) * refcount_copying(&dst, dtype_is_object, ndim, True) * free(tmpdata) # <<<<<<<<<<<<<< @@ -15968,7 +17846,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ */ free(__pyx_v_tmpdata); - /* "View.MemoryView":1281 + /* "View.MemoryView":1321 * refcount_copying(&dst, dtype_is_object, ndim, True) * free(tmpdata) * return 0 # <<<<<<<<<<<<<< @@ -15978,8 +17856,8 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ __pyx_r = 0; goto __pyx_L0; - /* "View.MemoryView":1275 - * direct_copy = slice_is_contig(&dst, 'F', ndim) + /* "View.MemoryView":1315 + * direct_copy = slice_is_contig(dst, 'F', ndim) * * if direct_copy: # <<<<<<<<<<<<<< * @@ -15987,7 +17865,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ */ } - /* "View.MemoryView":1267 + /* "View.MemoryView":1307 * src = tmp * * if not broadcasting: # <<<<<<<<<<<<<< @@ -15996,7 +17874,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ */ } - /* "View.MemoryView":1283 + /* "View.MemoryView":1323 * return 0 * * if order == 'F' == get_best_order(&dst, ndim): # <<<<<<<<<<<<<< @@ -16007,28 +17885,28 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ if (__pyx_t_2) { __pyx_t_2 = ('F' == __pyx_get_best_slice_order((&__pyx_v_dst), __pyx_v_ndim)); } - __pyx_t_7 = (__pyx_t_2 != 0); - if (__pyx_t_7) { + __pyx_t_8 = (__pyx_t_2 != 0); + if (__pyx_t_8) { - /* "View.MemoryView":1286 + /* "View.MemoryView":1326 * * * transpose_memslice(&src) # <<<<<<<<<<<<<< * transpose_memslice(&dst) * */ - __pyx_t_5 = __pyx_memslice_transpose((&__pyx_v_src)); if (unlikely(__pyx_t_5 == 0)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 1286; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = __pyx_memslice_transpose((&__pyx_v_src)); if (unlikely(__pyx_t_5 == ((int)0))) __PYX_ERR(2, 1326, __pyx_L1_error) - /* "View.MemoryView":1287 + /* "View.MemoryView":1327 * * transpose_memslice(&src) * transpose_memslice(&dst) # <<<<<<<<<<<<<< * * refcount_copying(&dst, dtype_is_object, ndim, False) */ - __pyx_t_5 = __pyx_memslice_transpose((&__pyx_v_dst)); if (unlikely(__pyx_t_5 == 0)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 1287; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = __pyx_memslice_transpose((&__pyx_v_dst)); if (unlikely(__pyx_t_5 == ((int)0))) __PYX_ERR(2, 1327, __pyx_L1_error) - /* "View.MemoryView":1283 + /* "View.MemoryView":1323 * return 0 * * if order == 'F' == get_best_order(&dst, ndim): # <<<<<<<<<<<<<< @@ -16037,7 +17915,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ */ } - /* "View.MemoryView":1289 + /* "View.MemoryView":1329 * transpose_memslice(&dst) * * refcount_copying(&dst, dtype_is_object, ndim, False) # <<<<<<<<<<<<<< @@ -16046,7 +17924,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ */ __pyx_memoryview_refcount_copying((&__pyx_v_dst), __pyx_v_dtype_is_object, __pyx_v_ndim, 0); - /* "View.MemoryView":1290 + /* "View.MemoryView":1330 * * refcount_copying(&dst, dtype_is_object, ndim, False) * copy_strided_to_strided(&src, &dst, ndim, itemsize) # <<<<<<<<<<<<<< @@ -16055,7 +17933,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ */ copy_strided_to_strided((&__pyx_v_src), (&__pyx_v_dst), __pyx_v_ndim, __pyx_v_itemsize); - /* "View.MemoryView":1291 + /* "View.MemoryView":1331 * refcount_copying(&dst, dtype_is_object, ndim, False) * copy_strided_to_strided(&src, &dst, ndim, itemsize) * refcount_copying(&dst, dtype_is_object, ndim, True) # <<<<<<<<<<<<<< @@ -16064,7 +17942,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ */ __pyx_memoryview_refcount_copying((&__pyx_v_dst), __pyx_v_dtype_is_object, __pyx_v_ndim, 1); - /* "View.MemoryView":1293 + /* "View.MemoryView":1333 * refcount_copying(&dst, dtype_is_object, ndim, True) * * free(tmpdata) # <<<<<<<<<<<<<< @@ -16073,7 +17951,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ */ free(__pyx_v_tmpdata); - /* "View.MemoryView":1294 + /* "View.MemoryView":1334 * * free(tmpdata) * return 0 # <<<<<<<<<<<<<< @@ -16083,7 +17961,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ __pyx_r = 0; goto __pyx_L0; - /* "View.MemoryView":1225 + /* "View.MemoryView":1265 * * @cname('__pyx_memoryview_copy_contents') * cdef int memoryview_copy_contents(__Pyx_memviewslice src, # <<<<<<<<<<<<<< @@ -16095,11 +17973,11 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ __pyx_L1_error:; { #ifdef WITH_THREAD - PyGILState_STATE __pyx_gilstate_save = PyGILState_Ensure(); + PyGILState_STATE __pyx_gilstate_save = __Pyx_PyGILState_Ensure(); #endif __Pyx_AddTraceback("View.MemoryView.memoryview_copy_contents", __pyx_clineno, __pyx_lineno, __pyx_filename); #ifdef WITH_THREAD - PyGILState_Release(__pyx_gilstate_save); + __Pyx_PyGILState_Release(__pyx_gilstate_save); #endif } __pyx_r = -1; @@ -16107,7 +17985,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ return __pyx_r; } -/* "View.MemoryView":1297 +/* "View.MemoryView":1337 * * @cname('__pyx_memoryview_broadcast_leading') * cdef void broadcast_leading(__Pyx_memviewslice *mslice, # <<<<<<<<<<<<<< @@ -16120,8 +17998,9 @@ static void __pyx_memoryview_broadcast_leading(__Pyx_memviewslice *__pyx_v_mslic int __pyx_v_offset; int __pyx_t_1; int __pyx_t_2; + int __pyx_t_3; - /* "View.MemoryView":1301 + /* "View.MemoryView":1341 * int ndim_other) nogil: * cdef int i * cdef int offset = ndim_other - ndim # <<<<<<<<<<<<<< @@ -16130,17 +18009,17 @@ static void __pyx_memoryview_broadcast_leading(__Pyx_memviewslice *__pyx_v_mslic */ __pyx_v_offset = (__pyx_v_ndim_other - __pyx_v_ndim); - /* "View.MemoryView":1303 + /* "View.MemoryView":1343 * cdef int offset = ndim_other - ndim * * for i in range(ndim - 1, -1, -1): # <<<<<<<<<<<<<< * mslice.shape[i + offset] = mslice.shape[i] * mslice.strides[i + offset] = mslice.strides[i] */ - for (__pyx_t_1 = (__pyx_v_ndim - 1); __pyx_t_1 > -1L; __pyx_t_1-=1) { + for (__pyx_t_1 = (__pyx_v_ndim - 1); __pyx_t_1 > -1; __pyx_t_1-=1) { __pyx_v_i = __pyx_t_1; - /* "View.MemoryView":1304 + /* "View.MemoryView":1344 * * for i in range(ndim - 1, -1, -1): * mslice.shape[i + offset] = mslice.shape[i] # <<<<<<<<<<<<<< @@ -16149,7 +18028,7 @@ static void __pyx_memoryview_broadcast_leading(__Pyx_memviewslice *__pyx_v_mslic */ (__pyx_v_mslice->shape[(__pyx_v_i + __pyx_v_offset)]) = (__pyx_v_mslice->shape[__pyx_v_i]); - /* "View.MemoryView":1305 + /* "View.MemoryView":1345 * for i in range(ndim - 1, -1, -1): * mslice.shape[i + offset] = mslice.shape[i] * mslice.strides[i + offset] = mslice.strides[i] # <<<<<<<<<<<<<< @@ -16158,7 +18037,7 @@ static void __pyx_memoryview_broadcast_leading(__Pyx_memviewslice *__pyx_v_mslic */ (__pyx_v_mslice->strides[(__pyx_v_i + __pyx_v_offset)]) = (__pyx_v_mslice->strides[__pyx_v_i]); - /* "View.MemoryView":1306 + /* "View.MemoryView":1346 * mslice.shape[i + offset] = mslice.shape[i] * mslice.strides[i + offset] = mslice.strides[i] * mslice.suboffsets[i + offset] = mslice.suboffsets[i] # <<<<<<<<<<<<<< @@ -16168,7 +18047,7 @@ static void __pyx_memoryview_broadcast_leading(__Pyx_memviewslice *__pyx_v_mslic (__pyx_v_mslice->suboffsets[(__pyx_v_i + __pyx_v_offset)]) = (__pyx_v_mslice->suboffsets[__pyx_v_i]); } - /* "View.MemoryView":1308 + /* "View.MemoryView":1348 * mslice.suboffsets[i + offset] = mslice.suboffsets[i] * * for i in range(offset): # <<<<<<<<<<<<<< @@ -16176,10 +18055,11 @@ static void __pyx_memoryview_broadcast_leading(__Pyx_memviewslice *__pyx_v_mslic * mslice.strides[i] = mslice.strides[0] */ __pyx_t_1 = __pyx_v_offset; - for (__pyx_t_2 = 0; __pyx_t_2 < __pyx_t_1; __pyx_t_2+=1) { - __pyx_v_i = __pyx_t_2; + __pyx_t_2 = __pyx_t_1; + for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) { + __pyx_v_i = __pyx_t_3; - /* "View.MemoryView":1309 + /* "View.MemoryView":1349 * * for i in range(offset): * mslice.shape[i] = 1 # <<<<<<<<<<<<<< @@ -16188,7 +18068,7 @@ static void __pyx_memoryview_broadcast_leading(__Pyx_memviewslice *__pyx_v_mslic */ (__pyx_v_mslice->shape[__pyx_v_i]) = 1; - /* "View.MemoryView":1310 + /* "View.MemoryView":1350 * for i in range(offset): * mslice.shape[i] = 1 * mslice.strides[i] = mslice.strides[0] # <<<<<<<<<<<<<< @@ -16197,7 +18077,7 @@ static void __pyx_memoryview_broadcast_leading(__Pyx_memviewslice *__pyx_v_mslic */ (__pyx_v_mslice->strides[__pyx_v_i]) = (__pyx_v_mslice->strides[0]); - /* "View.MemoryView":1311 + /* "View.MemoryView":1351 * mslice.shape[i] = 1 * mslice.strides[i] = mslice.strides[0] * mslice.suboffsets[i] = -1 # <<<<<<<<<<<<<< @@ -16207,7 +18087,7 @@ static void __pyx_memoryview_broadcast_leading(__Pyx_memviewslice *__pyx_v_mslic (__pyx_v_mslice->suboffsets[__pyx_v_i]) = -1L; } - /* 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(__pyx_v_dtype_is_object != 0); if (__pyx_t_1) { - /* "View.MemoryView":1324 + /* "View.MemoryView":1364 * * if dtype_is_object: * refcount_objects_in_slice_with_gil(dst.data, dst.shape, # <<<<<<<<<<<<<< @@ -16248,7 +18128,7 @@ static void __pyx_memoryview_refcount_copying(__Pyx_memviewslice *__pyx_v_dst, i */ __pyx_memoryview_refcount_objects_in_slice_with_gil(__pyx_v_dst->data, __pyx_v_dst->shape, __pyx_v_dst->strides, __pyx_v_ndim, __pyx_v_inc); - /* "View.MemoryView":1323 + /* "View.MemoryView":1363 * * * if dtype_is_object: # <<<<<<<<<<<<<< @@ -16257,7 +18137,7 @@ static void __pyx_memoryview_refcount_copying(__Pyx_memviewslice *__pyx_v_dst, i */ } - /* "View.MemoryView":1319 + /* "View.MemoryView":1359 * * @cname('__pyx_memoryview_refcount_copying') * cdef void refcount_copying(__Pyx_memviewslice *dst, bint dtype_is_object, # <<<<<<<<<<<<<< @@ -16268,7 +18148,7 @@ static void __pyx_memoryview_refcount_copying(__Pyx_memviewslice *__pyx_v_dst, i /* function exit code */ } -/* 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__Pyx_RefNannyDeclarations Py_ssize_t __pyx_t_1; Py_ssize_t __pyx_t_2; - int __pyx_t_3; + Py_ssize_t __pyx_t_3; + int __pyx_t_4; __Pyx_RefNannySetupContext("refcount_objects_in_slice", 0); - /* "View.MemoryView":1338 + /* "View.MemoryView":1378 * cdef Py_ssize_t i * * for i in range(shape[0]): # <<<<<<<<<<<<<< @@ -16331,30 +18212,31 @@ static void __pyx_memoryview_refcount_objects_in_slice(char *__pyx_v_data, Py_ss * if inc: */ __pyx_t_1 = (__pyx_v_shape[0]); - for (__pyx_t_2 = 0; __pyx_t_2 < __pyx_t_1; __pyx_t_2+=1) { - __pyx_v_i = __pyx_t_2; + __pyx_t_2 = __pyx_t_1; + for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) { + __pyx_v_i = __pyx_t_3; - /* "View.MemoryView":1339 + /* "View.MemoryView":1379 * * for i in range(shape[0]): * if ndim == 1: # <<<<<<<<<<<<<< * if inc: * Py_INCREF(( data)[0]) */ - __pyx_t_3 = ((__pyx_v_ndim == 1) != 0); - if (__pyx_t_3) { + __pyx_t_4 = ((__pyx_v_ndim == 1) != 0); + if (__pyx_t_4) { - /* "View.MemoryView":1340 + /* "View.MemoryView":1380 * for 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(struct __pyx_array_obj *)o; - #if PY_VERSION_HEX >= 0x030400a1 - if (unlikely(Py_TYPE(o)->tp_finalize) && (!PyType_IS_GC(Py_TYPE(o)) || !_PyGC_FINALIZED(o))) { + #if CYTHON_USE_TP_FINALIZE + if (unlikely(PyType_HasFeature(Py_TYPE(o), Py_TPFLAGS_HAVE_FINALIZE) && Py_TYPE(o)->tp_finalize) && (!PyType_IS_GC(Py_TYPE(o)) || !_PyGC_FINALIZED(o))) { if (PyObject_CallFinalizerFromDealloc(o)) return; } #endif @@ -16670,7 +18946,7 @@ static int __pyx_mp_ass_subscript_array(PyObject *o, PyObject *i, PyObject *v) { } static PyObject *__pyx_tp_getattro_array(PyObject *o, PyObject *n) { - PyObject *v = PyObject_GenericGetAttr(o, n); + PyObject *v = __Pyx_PyObject_GenericGetAttr(o, n); if (!v && PyErr_ExceptionMatches(PyExc_AttributeError)) { PyErr_Clear(); v = __pyx_array___getattr__(o, n); @@ -16679,21 +18955,23 @@ static PyObject *__pyx_tp_getattro_array(PyObject *o, PyObject *n) { } static PyObject *__pyx_getprop___pyx_array_memview(PyObject *o, CYTHON_UNUSED void *x) { - return get_memview(o); + return __pyx_pw_15View_dot_MemoryView_5array_7memview_1__get__(o); } static PyMethodDef __pyx_methods_array[] = { {"__getattr__", (PyCFunction)__pyx_array___getattr__, METH_O|METH_COEXIST, 0}, + {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_array_1__reduce_cython__, METH_NOARGS, 0}, + {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_array_3__setstate_cython__, METH_O, 0}, {0, 0, 0, 0} }; static struct PyGetSetDef __pyx_getsets_array[] = { - {(char *)"memview", __pyx_getprop___pyx_array_memview, 0, 0, 0}, + {(char *)"memview", __pyx_getprop___pyx_array_memview, 0, (char *)0, 0}, {0, 0, 0, 0, 0} }; static PySequenceMethods __pyx_tp_as_sequence_array = { - 0, /*sq_length*/ + __pyx_array___len__, /*sq_length*/ 0, /*sq_concat*/ 0, /*sq_repeat*/ __pyx_sq_item_array, /*sq_item*/ @@ -16706,7 +18984,7 @@ static PySequenceMethods __pyx_tp_as_sequence_array = { }; static PyMappingMethods __pyx_tp_as_mapping_array = { - 0, /*mp_length*/ + __pyx_array___len__, /*mp_length*/ __pyx_array___getitem__, /*mp_subscript*/ __pyx_mp_ass_subscript_array, /*mp_ass_subscript*/ }; @@ -16730,7 +19008,7 @@ static PyBufferProcs __pyx_tp_as_buffer_array = { static PyTypeObject __pyx_type___pyx_array = { PyVarObject_HEAD_INIT(0, 0) - "GPy.kern._src.stationary_cython.array", /*tp_name*/ + "GPy.kern.src.stationary_cython.array", /*tp_name*/ sizeof(struct __pyx_array_obj), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_array, /*tp_dealloc*/ @@ -16802,8 +19080,8 @@ static PyObject *__pyx_tp_new_Enum(PyTypeObject *t, CYTHON_UNUSED PyObject *a, C static void __pyx_tp_dealloc_Enum(PyObject *o) { struct __pyx_MemviewEnum_obj *p = (struct __pyx_MemviewEnum_obj *)o; - #if PY_VERSION_HEX >= 0x030400a1 - if (unlikely(Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) { + #if CYTHON_USE_TP_FINALIZE + if (unlikely(PyType_HasFeature(Py_TYPE(o), Py_TPFLAGS_HAVE_FINALIZE) && Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) { if (PyObject_CallFinalizerFromDealloc(o)) return; } #endif @@ -16831,12 +19109,14 @@ static int __pyx_tp_clear_Enum(PyObject *o) { } static PyMethodDef __pyx_methods_Enum[] = { + {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_MemviewEnum_1__reduce_cython__, METH_NOARGS, 0}, + {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_MemviewEnum_3__setstate_cython__, METH_O, 0}, {0, 0, 0, 0} }; static PyTypeObject __pyx_type___pyx_MemviewEnum = { PyVarObject_HEAD_INIT(0, 0) - "GPy.kern._src.stationary_cython.Enum", /*tp_name*/ + "GPy.kern.src.stationary_cython.Enum", /*tp_name*/ sizeof(struct __pyx_MemviewEnum_obj), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_Enum, /*tp_dealloc*/ @@ -16908,16 +19188,17 @@ static PyObject *__pyx_tp_new_memoryview(PyTypeObject *t, PyObject *a, PyObject p->_size = Py_None; Py_INCREF(Py_None); p->_array_interface = Py_None; Py_INCREF(Py_None); p->view.obj = NULL; - if (unlikely(__pyx_memoryview___cinit__(o, a, k) < 0)) { - Py_DECREF(o); o = 0; - } + if (unlikely(__pyx_memoryview___cinit__(o, a, k) < 0)) goto bad; return o; + bad: + Py_DECREF(o); o = 0; + return NULL; } static void __pyx_tp_dealloc_memoryview(PyObject *o) { struct __pyx_memoryview_obj *p = (struct __pyx_memoryview_obj *)o; - #if PY_VERSION_HEX >= 0x030400a1 - if (unlikely(Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) { + #if CYTHON_USE_TP_FINALIZE + if (unlikely(PyType_HasFeature(Py_TYPE(o), Py_TPFLAGS_HAVE_FINALIZE) && Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) { if (PyObject_CallFinalizerFromDealloc(o)) return; } #endif @@ -16989,39 +19270,39 @@ static int __pyx_mp_ass_subscript_memoryview(PyObject *o, PyObject *i, PyObject } static PyObject *__pyx_getprop___pyx_memoryview_T(PyObject *o, CYTHON_UNUSED void *x) { - return __pyx_memoryview_transpose(o); + return __pyx_pw_15View_dot_MemoryView_10memoryview_1T_1__get__(o); } static PyObject *__pyx_getprop___pyx_memoryview_base(PyObject *o, CYTHON_UNUSED void *x) { - return __pyx_memoryview__get__base(o); + return __pyx_pw_15View_dot_MemoryView_10memoryview_4base_1__get__(o); } static PyObject *__pyx_getprop___pyx_memoryview_shape(PyObject *o, CYTHON_UNUSED void *x) { - return __pyx_memoryview_get_shape(o); + return __pyx_pw_15View_dot_MemoryView_10memoryview_5shape_1__get__(o); } static PyObject *__pyx_getprop___pyx_memoryview_strides(PyObject *o, CYTHON_UNUSED void *x) { - return __pyx_memoryview_get_strides(o); + return __pyx_pw_15View_dot_MemoryView_10memoryview_7strides_1__get__(o); } static PyObject *__pyx_getprop___pyx_memoryview_suboffsets(PyObject *o, CYTHON_UNUSED void *x) { - return __pyx_memoryview_get_suboffsets(o); + return __pyx_pw_15View_dot_MemoryView_10memoryview_10suboffsets_1__get__(o); } static PyObject *__pyx_getprop___pyx_memoryview_ndim(PyObject *o, CYTHON_UNUSED void *x) { - return __pyx_memoryview_get_ndim(o); + return __pyx_pw_15View_dot_MemoryView_10memoryview_4ndim_1__get__(o); } static PyObject *__pyx_getprop___pyx_memoryview_itemsize(PyObject *o, CYTHON_UNUSED void *x) { - return __pyx_memoryview_get_itemsize(o); + return __pyx_pw_15View_dot_MemoryView_10memoryview_8itemsize_1__get__(o); } static PyObject *__pyx_getprop___pyx_memoryview_nbytes(PyObject *o, CYTHON_UNUSED void *x) { - return __pyx_memoryview_get_nbytes(o); + return __pyx_pw_15View_dot_MemoryView_10memoryview_6nbytes_1__get__(o); } static PyObject *__pyx_getprop___pyx_memoryview_size(PyObject *o, CYTHON_UNUSED void *x) { - return __pyx_memoryview_get_size(o); + return __pyx_pw_15View_dot_MemoryView_10memoryview_4size_1__get__(o); } static PyMethodDef __pyx_methods_memoryview[] = { @@ -17029,19 +19310,21 @@ static PyMethodDef __pyx_methods_memoryview[] = { {"is_f_contig", (PyCFunction)__pyx_memoryview_is_f_contig, METH_NOARGS, 0}, {"copy", (PyCFunction)__pyx_memoryview_copy, METH_NOARGS, 0}, {"copy_fortran", (PyCFunction)__pyx_memoryview_copy_fortran, METH_NOARGS, 0}, + {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_memoryview_1__reduce_cython__, METH_NOARGS, 0}, + {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_memoryview_3__setstate_cython__, METH_O, 0}, {0, 0, 0, 0} }; static struct PyGetSetDef __pyx_getsets_memoryview[] = { - {(char *)"T", __pyx_getprop___pyx_memoryview_T, 0, 0, 0}, - {(char *)"base", __pyx_getprop___pyx_memoryview_base, 0, 0, 0}, - {(char *)"shape", __pyx_getprop___pyx_memoryview_shape, 0, 0, 0}, - {(char *)"strides", __pyx_getprop___pyx_memoryview_strides, 0, 0, 0}, - {(char *)"suboffsets", __pyx_getprop___pyx_memoryview_suboffsets, 0, 0, 0}, - {(char *)"ndim", __pyx_getprop___pyx_memoryview_ndim, 0, 0, 0}, - {(char *)"itemsize", __pyx_getprop___pyx_memoryview_itemsize, 0, 0, 0}, - {(char *)"nbytes", __pyx_getprop___pyx_memoryview_nbytes, 0, 0, 0}, - {(char *)"size", __pyx_getprop___pyx_memoryview_size, 0, 0, 0}, + {(char *)"T", __pyx_getprop___pyx_memoryview_T, 0, (char *)0, 0}, + {(char *)"base", __pyx_getprop___pyx_memoryview_base, 0, (char *)0, 0}, + {(char *)"shape", __pyx_getprop___pyx_memoryview_shape, 0, (char *)0, 0}, + {(char *)"strides", __pyx_getprop___pyx_memoryview_strides, 0, (char *)0, 0}, + {(char *)"suboffsets", __pyx_getprop___pyx_memoryview_suboffsets, 0, (char *)0, 0}, + {(char *)"ndim", __pyx_getprop___pyx_memoryview_ndim, 0, (char *)0, 0}, + {(char *)"itemsize", __pyx_getprop___pyx_memoryview_itemsize, 0, (char *)0, 0}, + {(char *)"nbytes", __pyx_getprop___pyx_memoryview_nbytes, 0, (char *)0, 0}, + {(char *)"size", __pyx_getprop___pyx_memoryview_size, 0, (char *)0, 0}, {0, 0, 0, 0, 0} }; @@ -17083,7 +19366,7 @@ static PyBufferProcs __pyx_tp_as_buffer_memoryview = { static PyTypeObject __pyx_type___pyx_memoryview = { PyVarObject_HEAD_INIT(0, 0) - "GPy.kern._src.stationary_cython.memoryview", /*tp_name*/ + "GPy.kern.src.stationary_cython.memoryview", /*tp_name*/ sizeof(struct __pyx_memoryview_obj), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc_memoryview, /*tp_dealloc*/ @@ -17153,8 +19436,8 @@ static PyObject *__pyx_tp_new__memoryviewslice(PyTypeObject *t, PyObject *a, PyO static void __pyx_tp_dealloc__memoryviewslice(PyObject *o) { struct __pyx_memoryviewslice_obj *p = (struct __pyx_memoryviewslice_obj *)o; - #if PY_VERSION_HEX >= 0x030400a1 - if (unlikely(Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) { + #if CYTHON_USE_TP_FINALIZE + if (unlikely(PyType_HasFeature(Py_TYPE(o), Py_TPFLAGS_HAVE_FINALIZE) && Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) { if (PyObject_CallFinalizerFromDealloc(o)) return; } #endif @@ -17194,21 +19477,23 @@ static int __pyx_tp_clear__memoryviewslice(PyObject *o) { } static PyObject *__pyx_getprop___pyx_memoryviewslice_base(PyObject *o, CYTHON_UNUSED void *x) { - return __pyx_memoryviewslice__get__base(o); + return __pyx_pw_15View_dot_MemoryView_16_memoryviewslice_4base_1__get__(o); } static PyMethodDef __pyx_methods__memoryviewslice[] = { + {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_memoryviewslice_1__reduce_cython__, METH_NOARGS, 0}, + {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_memoryviewslice_3__setstate_cython__, METH_O, 0}, {0, 0, 0, 0} }; static struct PyGetSetDef __pyx_getsets__memoryviewslice[] = { - {(char *)"base", __pyx_getprop___pyx_memoryviewslice_base, 0, 0, 0}, + {(char *)"base", __pyx_getprop___pyx_memoryviewslice_base, 0, (char *)0, 0}, {0, 0, 0, 0, 0} }; static PyTypeObject __pyx_type___pyx_memoryviewslice = { PyVarObject_HEAD_INIT(0, 0) - "GPy.kern._src.stationary_cython._memoryviewslice", /*tp_name*/ + "GPy.kern.src.stationary_cython._memoryviewslice", /*tp_name*/ sizeof(struct __pyx_memoryviewslice_obj), /*tp_basicsize*/ 0, /*tp_itemsize*/ __pyx_tp_dealloc__memoryviewslice, /*tp_dealloc*/ @@ -17277,34 +19562,62 @@ static PyMethodDef __pyx_methods[] = { }; #if PY_MAJOR_VERSION >= 3 +#if CYTHON_PEP489_MULTI_PHASE_INIT +static PyObject* __pyx_pymod_create(PyObject *spec, PyModuleDef *def); /*proto*/ +static int __pyx_pymod_exec_stationary_cython(PyObject* module); /*proto*/ +static PyModuleDef_Slot __pyx_moduledef_slots[] = { + {Py_mod_create, (void*)__pyx_pymod_create}, + {Py_mod_exec, (void*)__pyx_pymod_exec_stationary_cython}, + {0, NULL} +}; +#endif + static struct PyModuleDef __pyx_moduledef = { - #if PY_VERSION_HEX < 0x03020000 - { PyObject_HEAD_INIT(NULL) NULL, 0, NULL }, - #else PyModuleDef_HEAD_INIT, - #endif "stationary_cython", 0, /* m_doc */ + #if CYTHON_PEP489_MULTI_PHASE_INIT + 0, /* m_size */ + #else -1, /* m_size */ + #endif __pyx_methods /* m_methods */, + #if CYTHON_PEP489_MULTI_PHASE_INIT + __pyx_moduledef_slots, /* m_slots */ + #else NULL, /* m_reload */ + #endif NULL, /* m_traverse */ NULL, /* m_clear */ NULL /* m_free */ }; #endif +#ifndef CYTHON_SMALL_CODE +#if defined(__clang__) + #define CYTHON_SMALL_CODE +#elif defined(__GNUC__) && (__GNUC__ > 4 || (__GNUC__ == 4 && __GNUC_MINOR__ >= 3)) + #define CYTHON_SMALL_CODE __attribute__((cold)) +#else + #define CYTHON_SMALL_CODE +#endif +#endif static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_n_s_ASCII, __pyx_k_ASCII, sizeof(__pyx_k_ASCII), 0, 0, 1, 1}, {&__pyx_kp_s_Buffer_view_does_not_expose_stri, __pyx_k_Buffer_view_does_not_expose_stri, sizeof(__pyx_k_Buffer_view_does_not_expose_stri), 0, 0, 1, 0}, {&__pyx_kp_s_Can_only_create_a_buffer_that_is, __pyx_k_Can_only_create_a_buffer_that_is, sizeof(__pyx_k_Can_only_create_a_buffer_that_is), 0, 0, 1, 0}, + {&__pyx_kp_s_Cannot_assign_to_read_only_memor, __pyx_k_Cannot_assign_to_read_only_memor, sizeof(__pyx_k_Cannot_assign_to_read_only_memor), 0, 0, 1, 0}, + {&__pyx_kp_s_Cannot_create_writable_memory_vi, __pyx_k_Cannot_create_writable_memory_vi, sizeof(__pyx_k_Cannot_create_writable_memory_vi), 0, 0, 1, 0}, {&__pyx_kp_s_Cannot_index_with_type_s, __pyx_k_Cannot_index_with_type_s, sizeof(__pyx_k_Cannot_index_with_type_s), 0, 0, 1, 0}, {&__pyx_n_s_D, __pyx_k_D, sizeof(__pyx_k_D), 0, 0, 1, 1}, {&__pyx_n_s_Ellipsis, __pyx_k_Ellipsis, sizeof(__pyx_k_Ellipsis), 0, 0, 1, 1}, {&__pyx_kp_s_Empty_shape_tuple_for_cython_arr, 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{&__pyx_kp_s_Incompatible_checksums_s_vs_0xb0, __pyx_k_Incompatible_checksums_s_vs_0xb0, sizeof(__pyx_k_Incompatible_checksums_s_vs_0xb0), 0, 0, 1, 0}, {&__pyx_n_s_IndexError, __pyx_k_IndexError, sizeof(__pyx_k_IndexError), 0, 0, 1, 1}, {&__pyx_kp_s_Indirect_dimensions_not_supporte, __pyx_k_Indirect_dimensions_not_supporte, sizeof(__pyx_k_Indirect_dimensions_not_supporte), 0, 0, 1, 0}, {&__pyx_kp_s_Invalid_mode_expected_c_or_fortr, __pyx_k_Invalid_mode_expected_c_or_fortr, sizeof(__pyx_k_Invalid_mode_expected_c_or_fortr), 0, 0, 1, 0}, @@ -17317,12 +19630,13 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_kp_u_Non_native_byte_order_not_suppor, __pyx_k_Non_native_byte_order_not_suppor, sizeof(__pyx_k_Non_native_byte_order_not_suppor), 0, 1, 0, 0}, {&__pyx_n_b_O, __pyx_k_O, sizeof(__pyx_k_O), 0, 0, 0, 1}, {&__pyx_kp_s_Out_of_bounds_on_buffer_access_a, __pyx_k_Out_of_bounds_on_buffer_access_a, sizeof(__pyx_k_Out_of_bounds_on_buffer_access_a), 0, 0, 1, 0}, + {&__pyx_n_s_PickleError, __pyx_k_PickleError, sizeof(__pyx_k_PickleError), 0, 0, 1, 1}, {&__pyx_n_s_Q, __pyx_k_Q, sizeof(__pyx_k_Q), 0, 0, 1, 1}, {&__pyx_n_s_RuntimeError, __pyx_k_RuntimeError, sizeof(__pyx_k_RuntimeError), 0, 0, 1, 1}, {&__pyx_n_s_TypeError, __pyx_k_TypeError, sizeof(__pyx_k_TypeError), 0, 0, 1, 1}, {&__pyx_kp_s_Unable_to_convert_item_to_object, __pyx_k_Unable_to_convert_item_to_object, sizeof(__pyx_k_Unable_to_convert_item_to_object), 0, 0, 1, 0}, - {&__pyx_kp_s_Users_james_work_GPy_GPy_kern, __pyx_k_Users_james_work_GPy_GPy_kern, sizeof(__pyx_k_Users_james_work_GPy_GPy_kern), 0, 0, 1, 0}, {&__pyx_n_s_ValueError, __pyx_k_ValueError, sizeof(__pyx_k_ValueError), 0, 0, 1, 1}, + {&__pyx_n_s_View_MemoryView, __pyx_k_View_MemoryView, sizeof(__pyx_k_View_MemoryView), 0, 0, 1, 1}, {&__pyx_n_s_X, __pyx_k_X, sizeof(__pyx_k_X), 0, 0, 1, 1}, {&__pyx_n_s_X2, __pyx_k_X2, sizeof(__pyx_k_X2), 0, 0, 1, 1}, {&__pyx_n_s_X2_2, __pyx_k_X2_2, sizeof(__pyx_k_X2_2), 0, 0, 1, 1}, @@ -17332,9 +19646,11 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_n_s_c, __pyx_k_c, sizeof(__pyx_k_c), 0, 0, 1, 1}, {&__pyx_n_u_c, __pyx_k_c, sizeof(__pyx_k_c), 0, 1, 0, 1}, {&__pyx_n_s_class, __pyx_k_class, sizeof(__pyx_k_class), 0, 0, 1, 1}, + {&__pyx_n_s_cline_in_traceback, __pyx_k_cline_in_traceback, sizeof(__pyx_k_cline_in_traceback), 0, 0, 1, 1}, {&__pyx_kp_s_contiguous_and_direct, __pyx_k_contiguous_and_direct, sizeof(__pyx_k_contiguous_and_direct), 0, 0, 1, 0}, {&__pyx_kp_s_contiguous_and_indirect, __pyx_k_contiguous_and_indirect, sizeof(__pyx_k_contiguous_and_indirect), 0, 0, 1, 0}, {&__pyx_n_s_d, __pyx_k_d, sizeof(__pyx_k_d), 0, 0, 1, 1}, + {&__pyx_n_s_dict, __pyx_k_dict, sizeof(__pyx_k_dict), 0, 0, 1, 1}, {&__pyx_n_s_dist, __pyx_k_dist, sizeof(__pyx_k_dist), 0, 0, 1, 1}, {&__pyx_n_s_dtype_is_object, __pyx_k_dtype_is_object, sizeof(__pyx_k_dtype_is_object), 0, 0, 1, 1}, {&__pyx_n_s_encode, __pyx_k_encode, sizeof(__pyx_k_encode), 0, 0, 1, 1}, @@ -17344,6 +19660,7 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_n_s_format, __pyx_k_format, sizeof(__pyx_k_format), 0, 0, 1, 1}, {&__pyx_n_s_fortran, __pyx_k_fortran, sizeof(__pyx_k_fortran), 0, 0, 1, 1}, {&__pyx_n_u_fortran, __pyx_k_fortran, sizeof(__pyx_k_fortran), 0, 1, 0, 1}, + {&__pyx_n_s_getstate, __pyx_k_getstate, sizeof(__pyx_k_getstate), 0, 0, 1, 1}, {&__pyx_kp_s_got_differing_extents_in_dimensi, __pyx_k_got_differing_extents_in_dimensi, sizeof(__pyx_k_got_differing_extents_in_dimensi), 0, 0, 1, 0}, {&__pyx_n_s_grad, __pyx_k_grad, sizeof(__pyx_k_grad), 0, 0, 1, 1}, {&__pyx_n_s_grad_2, __pyx_k_grad_2, sizeof(__pyx_k_grad_2), 0, 0, 1, 1}, @@ -17367,14 +19684,30 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_kp_u_ndarray_is_not_C_contiguous, __pyx_k_ndarray_is_not_C_contiguous, sizeof(__pyx_k_ndarray_is_not_C_contiguous), 0, 1, 0, 0}, {&__pyx_kp_u_ndarray_is_not_Fortran_contiguou, __pyx_k_ndarray_is_not_Fortran_contiguou, sizeof(__pyx_k_ndarray_is_not_Fortran_contiguou), 0, 1, 0, 0}, {&__pyx_n_s_ndim, __pyx_k_ndim, sizeof(__pyx_k_ndim), 0, 0, 1, 1}, + {&__pyx_n_s_new, __pyx_k_new, sizeof(__pyx_k_new), 0, 0, 1, 1}, + {&__pyx_kp_s_no_default___reduce___due_to_non, __pyx_k_no_default___reduce___due_to_non, sizeof(__pyx_k_no_default___reduce___due_to_non), 0, 0, 1, 0}, {&__pyx_n_s_np, __pyx_k_np, sizeof(__pyx_k_np), 0, 0, 1, 1}, {&__pyx_n_s_numpy, __pyx_k_numpy, sizeof(__pyx_k_numpy), 0, 0, 1, 1}, + {&__pyx_kp_s_numpy_core_multiarray_failed_to, __pyx_k_numpy_core_multiarray_failed_to, sizeof(__pyx_k_numpy_core_multiarray_failed_to), 0, 0, 1, 0}, + {&__pyx_kp_s_numpy_core_umath_failed_to_impor, __pyx_k_numpy_core_umath_failed_to_impor, sizeof(__pyx_k_numpy_core_umath_failed_to_impor), 0, 0, 1, 0}, {&__pyx_n_s_obj, __pyx_k_obj, sizeof(__pyx_k_obj), 0, 0, 1, 1}, {&__pyx_n_s_pack, __pyx_k_pack, sizeof(__pyx_k_pack), 0, 0, 1, 1}, + {&__pyx_n_s_pickle, __pyx_k_pickle, sizeof(__pyx_k_pickle), 0, 0, 1, 1}, + {&__pyx_n_s_pyx_PickleError, __pyx_k_pyx_PickleError, sizeof(__pyx_k_pyx_PickleError), 0, 0, 1, 1}, + {&__pyx_n_s_pyx_checksum, __pyx_k_pyx_checksum, sizeof(__pyx_k_pyx_checksum), 0, 0, 1, 1}, {&__pyx_n_s_pyx_getbuffer, __pyx_k_pyx_getbuffer, sizeof(__pyx_k_pyx_getbuffer), 0, 0, 1, 1}, + {&__pyx_n_s_pyx_result, __pyx_k_pyx_result, sizeof(__pyx_k_pyx_result), 0, 0, 1, 1}, + {&__pyx_n_s_pyx_state, __pyx_k_pyx_state, sizeof(__pyx_k_pyx_state), 0, 0, 1, 1}, + {&__pyx_n_s_pyx_type, __pyx_k_pyx_type, sizeof(__pyx_k_pyx_type), 0, 0, 1, 1}, + {&__pyx_n_s_pyx_unpickle_Enum, __pyx_k_pyx_unpickle_Enum, sizeof(__pyx_k_pyx_unpickle_Enum), 0, 0, 1, 1}, {&__pyx_n_s_pyx_vtable, __pyx_k_pyx_vtable, sizeof(__pyx_k_pyx_vtable), 0, 0, 1, 1}, {&__pyx_n_s_q, __pyx_k_q, sizeof(__pyx_k_q), 0, 0, 1, 1}, {&__pyx_n_s_range, __pyx_k_range, sizeof(__pyx_k_range), 0, 0, 1, 1}, + {&__pyx_n_s_reduce, __pyx_k_reduce, sizeof(__pyx_k_reduce), 0, 0, 1, 1}, + {&__pyx_n_s_reduce_cython, __pyx_k_reduce_cython, sizeof(__pyx_k_reduce_cython), 0, 0, 1, 1}, + {&__pyx_n_s_reduce_ex, __pyx_k_reduce_ex, sizeof(__pyx_k_reduce_ex), 0, 0, 1, 1}, + {&__pyx_n_s_setstate, __pyx_k_setstate, sizeof(__pyx_k_setstate), 0, 0, 1, 1}, + {&__pyx_n_s_setstate_cython, __pyx_k_setstate_cython, sizeof(__pyx_k_setstate_cython), 0, 0, 1, 1}, {&__pyx_n_s_shape, __pyx_k_shape, sizeof(__pyx_k_shape), 0, 0, 1, 1}, {&__pyx_n_s_size, __pyx_k_size, sizeof(__pyx_k_size), 0, 0, 1, 1}, {&__pyx_n_s_start, __pyx_k_start, sizeof(__pyx_k_start), 0, 0, 1, 1}, @@ -17383,6 +19716,7 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_kp_s_strided_and_direct, __pyx_k_strided_and_direct, sizeof(__pyx_k_strided_and_direct), 0, 0, 1, 0}, {&__pyx_kp_s_strided_and_direct_or_indirect, __pyx_k_strided_and_direct_or_indirect, sizeof(__pyx_k_strided_and_direct_or_indirect), 0, 0, 1, 0}, {&__pyx_kp_s_strided_and_indirect, __pyx_k_strided_and_indirect, sizeof(__pyx_k_strided_and_indirect), 0, 0, 1, 0}, + {&__pyx_kp_s_stringsource, 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__pyx_t_1 = 0; - /* "View.MemoryView":280 + /* "View.MemoryView":288 * cdef generic = Enum("") * cdef strided = Enum("") # default * cdef indirect = Enum("") # <<<<<<<<<<<<<< * * */ - __pyx_t_1 = __Pyx_PyObject_Call(((PyObject *)__pyx_MemviewEnum_type), __pyx_tuple__30, NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 280; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_PyObject_Call(((PyObject *)__pyx_MemviewEnum_type), __pyx_tuple__36, NULL); if (unlikely(!__pyx_t_1)) __PYX_ERR(2, 288, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_1); __Pyx_XGOTREF(indirect); __Pyx_DECREF_SET(indirect, __pyx_t_1); __Pyx_GIVEREF(__pyx_t_1); __pyx_t_1 = 0; - /* "View.MemoryView":283 + /* "View.MemoryView":291 * * * cdef contiguous = Enum("") # <<<<<<<<<<<<<< * cdef indirect_contiguous = Enum("") * */ - __pyx_t_1 = __Pyx_PyObject_Call(((PyObject *)__pyx_MemviewEnum_type), __pyx_tuple__31, NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 283; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_PyObject_Call(((PyObject *)__pyx_MemviewEnum_type), __pyx_tuple__37, NULL); if (unlikely(!__pyx_t_1)) __PYX_ERR(2, 291, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_1); __Pyx_XGOTREF(contiguous); __Pyx_DECREF_SET(contiguous, __pyx_t_1); __Pyx_GIVEREF(__pyx_t_1); __pyx_t_1 = 0; - /* "View.MemoryView":284 + /* "View.MemoryView":292 * * cdef contiguous = Enum("") * cdef indirect_contiguous = Enum("") # <<<<<<<<<<<<<< * * */ - __pyx_t_1 = __Pyx_PyObject_Call(((PyObject *)__pyx_MemviewEnum_type), __pyx_tuple__32, NULL); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 284; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_PyObject_Call(((PyObject *)__pyx_MemviewEnum_type), __pyx_tuple__38, NULL); if (unlikely(!__pyx_t_1)) __PYX_ERR(2, 292, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_1); __Pyx_XGOTREF(indirect_contiguous); __Pyx_DECREF_SET(indirect_contiguous, __pyx_t_1); __Pyx_GIVEREF(__pyx_t_1); __pyx_t_1 = 0; - /* "View.MemoryView":498 + /* "View.MemoryView":316 + * + * DEF THREAD_LOCKS_PREALLOCATED = 8 + * cdef int __pyx_memoryview_thread_locks_used = 0 # <<<<<<<<<<<<<< + * cdef PyThread_type_lock[THREAD_LOCKS_PREALLOCATED] __pyx_memoryview_thread_locks = [ + * PyThread_allocate_lock(), + */ + __pyx_memoryview_thread_locks_used = 0; + + /* "View.MemoryView":317 + * DEF THREAD_LOCKS_PREALLOCATED = 8 + * cdef int __pyx_memoryview_thread_locks_used = 0 + * cdef PyThread_type_lock[THREAD_LOCKS_PREALLOCATED] __pyx_memoryview_thread_locks = [ # <<<<<<<<<<<<<< + * PyThread_allocate_lock(), + * PyThread_allocate_lock(), + */ + __pyx_t_3[0] = PyThread_allocate_lock(); + __pyx_t_3[1] = PyThread_allocate_lock(); + __pyx_t_3[2] = PyThread_allocate_lock(); + __pyx_t_3[3] = PyThread_allocate_lock(); + __pyx_t_3[4] = PyThread_allocate_lock(); + __pyx_t_3[5] = PyThread_allocate_lock(); + __pyx_t_3[6] = PyThread_allocate_lock(); + __pyx_t_3[7] = PyThread_allocate_lock(); + memcpy(&(__pyx_memoryview_thread_locks[0]), __pyx_t_3, sizeof(__pyx_memoryview_thread_locks[0]) * (8)); 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- /* "View.MemoryView":954 - * return self.from_object + /* "View.MemoryView":991 + * return self.from_object * * __pyx_getbuffer = capsule( &__pyx_memoryview_getbuffer, "getbuffer(obj, view, flags)") # <<<<<<<<<<<<<< * * */ - __pyx_t_1 = __pyx_capsule_create(((void *)(&__pyx_memoryview_getbuffer)), __pyx_k_getbuffer_obj_view_flags); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 954; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __pyx_capsule_create(((void *)(&__pyx_memoryview_getbuffer)), ((char *)"getbuffer(obj, view, flags)")); if (unlikely(!__pyx_t_1)) __PYX_ERR(2, 991, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_1); - if (PyDict_SetItem(__pyx_memoryviewslice_type->tp_dict, __pyx_n_s_pyx_getbuffer, __pyx_t_1) < 0) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 954; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyDict_SetItem((PyObject *)__pyx_memoryviewslice_type->tp_dict, __pyx_n_s_pyx_getbuffer, __pyx_t_1) < 0) __PYX_ERR(2, 991, __pyx_L1_error) __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; PyType_Modified(__pyx_memoryviewslice_type); - /* "View.MemoryView":1364 - * - * @cname('__pyx_memoryview__slice_assign_scalar') - * cdef void _slice_assign_scalar(char *data, Py_ssize_t *shape, # <<<<<<<<<<<<<< - * Py_ssize_t *strides, int ndim, - * size_t itemsize, void *item) nogil: + /* "(tree fragment)":1 + * def __pyx_unpickle_Enum(__pyx_type, long __pyx_checksum, __pyx_state): # <<<<<<<<<<<<<< + * cdef object __pyx_PickleError + * cdef object __pyx_result + */ + __pyx_t_1 = PyCFunction_NewEx(&__pyx_mdef_15View_dot_MemoryView_1__pyx_unpickle_Enum, NULL, __pyx_n_s_View_MemoryView); if (unlikely(!__pyx_t_1)) __PYX_ERR(2, 1, __pyx_L1_error) + __Pyx_GOTREF(__pyx_t_1); + if (PyDict_SetItem(__pyx_d, __pyx_n_s_pyx_unpickle_Enum, __pyx_t_1) < 0) __PYX_ERR(2, 1, __pyx_L1_error) + __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; + + /* "(tree fragment)":11 + * __pyx_unpickle_Enum__set_state( __pyx_result, __pyx_state) + * return __pyx_result + * cdef __pyx_unpickle_Enum__set_state(Enum __pyx_result, tuple __pyx_state): # <<<<<<<<<<<<<< + * __pyx_result.name = __pyx_state[0] + * if len(__pyx_state) > 1 and hasattr(__pyx_result, '__dict__'): */ /*--- Wrapped vars code ---*/ @@ -18082,29 +20737,32 @@ PyMODINIT_FUNC PyInit_stationary_cython(void) __Pyx_XDECREF(__pyx_t_1); if (__pyx_m) { if (__pyx_d) { - __Pyx_AddTraceback("init GPy.kern._src.stationary_cython", __pyx_clineno, __pyx_lineno, __pyx_filename); + __Pyx_AddTraceback("init GPy.kern.src.stationary_cython", __pyx_clineno, __pyx_lineno, __pyx_filename); } - Py_DECREF(__pyx_m); __pyx_m = 0; + Py_CLEAR(__pyx_m); } else if (!PyErr_Occurred()) { - PyErr_SetString(PyExc_ImportError, "init GPy.kern._src.stationary_cython"); + PyErr_SetString(PyExc_ImportError, "init GPy.kern.src.stationary_cython"); } __pyx_L0:; __Pyx_RefNannyFinishContext(); - #if PY_MAJOR_VERSION < 3 - return; - #else + #if CYTHON_PEP489_MULTI_PHASE_INIT + return (__pyx_m != NULL) ? 0 : -1; + #elif PY_MAJOR_VERSION >= 3 return __pyx_m; + #else + return; #endif } /* --- Runtime support code --- */ +/* Refnanny */ #if CYTHON_REFNANNY static __Pyx_RefNannyAPIStruct *__Pyx_RefNannyImportAPI(const char *modname) { PyObject *m = NULL, *p = NULL; void *r = NULL; - m = PyImport_ImportModule((char *)modname); + m = PyImport_ImportModule(modname); if (!m) goto end; - p = PyObject_GetAttrString(m, (char *)"RefNannyAPI"); + p = PyObject_GetAttrString(m, "RefNannyAPI"); if (!p) goto end; r = PyLong_AsVoidPtr(p); end: @@ -18114,6 +20772,21 @@ end: } #endif +/* PyObjectGetAttrStr */ +#if CYTHON_USE_TYPE_SLOTS +static CYTHON_INLINE PyObject* __Pyx_PyObject_GetAttrStr(PyObject* obj, PyObject* attr_name) { + PyTypeObject* tp = Py_TYPE(obj); + if (likely(tp->tp_getattro)) + return tp->tp_getattro(obj, attr_name); +#if PY_MAJOR_VERSION < 3 + if (likely(tp->tp_getattr)) + return tp->tp_getattr(obj, PyString_AS_STRING(attr_name)); +#endif + return PyObject_GetAttr(obj, attr_name); +} +#endif + +/* GetBuiltinName */ static PyObject *__Pyx_GetBuiltinName(PyObject *name) { PyObject* result = __Pyx_PyObject_GetAttrStr(__pyx_b, name); if (unlikely(!result)) { @@ -18127,6 +20800,7 @@ static PyObject *__Pyx_GetBuiltinName(PyObject *name) { return result; } +/* RaiseArgTupleInvalid */ static void __Pyx_RaiseArgtupleInvalid( const char* func_name, int exact, @@ -18152,6 +20826,7 @@ static void __Pyx_RaiseArgtupleInvalid( (num_expected == 1) ? "" : "s", num_found); } +/* RaiseDoubleKeywords */ static void __Pyx_RaiseDoubleKeywordsError( const char* func_name, PyObject* kw_name) @@ -18165,6 +20840,7 @@ static void __Pyx_RaiseDoubleKeywordsError( #endif } +/* ParseKeywords */ static int __Pyx_ParseOptionalKeywords( PyObject *kwds, PyObject **argnames[], @@ -18266,36 +20942,39 @@ bad: return -1; } -static void __Pyx_RaiseArgumentTypeInvalid(const char* name, PyObject *obj, PyTypeObject *type) { - PyErr_Format(PyExc_TypeError, - "Argument '%.200s' has incorrect type (expected %.200s, got %.200s)", - name, type->tp_name, Py_TYPE(obj)->tp_name); -} -static CYTHON_INLINE int __Pyx_ArgTypeTest(PyObject *obj, PyTypeObject *type, int none_allowed, - const char *name, int exact) +/* ArgTypeTest */ +static int __Pyx__ArgTypeTest(PyObject *obj, PyTypeObject *type, const char *name, int exact) { if (unlikely(!type)) { PyErr_SetString(PyExc_SystemError, "Missing type object"); return 0; } - if (none_allowed && obj == Py_None) return 1; else if (exact) { - if (likely(Py_TYPE(obj) == type)) return 1; #if PY_MAJOR_VERSION == 2 - else if ((type == &PyBaseString_Type) && likely(__Pyx_PyBaseString_CheckExact(obj))) return 1; + if ((type == &PyBaseString_Type) && likely(__Pyx_PyBaseString_CheckExact(obj))) return 1; #endif } else { - if (likely(PyObject_TypeCheck(obj, type))) return 1; + if (likely(__Pyx_TypeCheck(obj, type))) return 1; } - __Pyx_RaiseArgumentTypeInvalid(name, obj, type); + PyErr_Format(PyExc_TypeError, + "Argument '%.200s' has incorrect type (expected %.200s, got %.200s)", + name, type->tp_name, Py_TYPE(obj)->tp_name); return 0; } -static CYTHON_INLINE int __Pyx_IsLittleEndian(void) { - unsigned int n = 1; - return *(unsigned char*)(&n) != 0; +/* IsLittleEndian */ +static CYTHON_INLINE int __Pyx_Is_Little_Endian(void) +{ + union { + uint32_t u32; + uint8_t u8[4]; + } S; + S.u32 = 0x01020304; + return S.u8[0] == 4; } + +/* BufferFormatCheck */ static void __Pyx_BufFmt_Init(__Pyx_BufFmt_Context* ctx, __Pyx_BufFmt_StackElem* stack, __Pyx_TypeInfo* type) { @@ -18617,7 +21296,7 @@ static int __Pyx_BufFmt_ProcessTypeChunk(__Pyx_BufFmt_Context* ctx) { ctx->is_complex = 0; return 0; } -static CYTHON_INLINE PyObject * +static PyObject * __pyx_buffmt_parse_array(__Pyx_BufFmt_Context* ctx, const char** tsp) { const char *ts = *tsp; @@ -18682,7 +21361,7 @@ static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const cha ++ts; break; case '<': - if (!__Pyx_IsLittleEndian()) { + if (!__Pyx_Is_Little_Endian()) { PyErr_SetString(PyExc_ValueError, "Little-endian buffer not supported on big-endian compiler"); return NULL; } @@ -18691,7 +21370,7 @@ static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const cha break; case '>': case '!': - if (__Pyx_IsLittleEndian()) { + if (__Pyx_Is_Little_Endian()) { PyErr_SetString(PyExc_ValueError, "Big-endian buffer not supported on little-endian compiler"); return NULL; } @@ -18755,6 +21434,7 @@ static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const cha __Pyx_BufFmt_RaiseUnexpectedChar('Z'); return NULL; } + CYTHON_FALLTHROUGH; case 'c': case 'b': case 'B': case 'h': case 'H': case 'i': case 'I': case 'l': case 'L': case 'q': case 'Q': case 'f': case 'd': case 'g': @@ -18767,6 +21447,7 @@ static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const cha ++ts; break; } + CYTHON_FALLTHROUGH; case 's': if (__Pyx_BufFmt_ProcessTypeChunk(ctx) == -1) return NULL; ctx->enc_count = ctx->new_count; @@ -18794,24 +21475,30 @@ static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const cha } } } -static CYTHON_INLINE void __Pyx_ZeroBuffer(Py_buffer* buf) { + +/* BufferGetAndValidate */ + static CYTHON_INLINE void __Pyx_SafeReleaseBuffer(Py_buffer* info) { + if (unlikely(info->buf == NULL)) return; + if (info->suboffsets == __Pyx_minusones) info->suboffsets = NULL; + __Pyx_ReleaseBuffer(info); +} +static void __Pyx_ZeroBuffer(Py_buffer* buf) { buf->buf = NULL; buf->obj = NULL; buf->strides = __Pyx_zeros; buf->shape = __Pyx_zeros; buf->suboffsets = __Pyx_minusones; } -static CYTHON_INLINE int __Pyx_GetBufferAndValidate( +static int __Pyx__GetBufferAndValidate( Py_buffer* buf, PyObject* obj, __Pyx_TypeInfo* dtype, int flags, int nd, int cast, __Pyx_BufFmt_StackElem* stack) { - if (obj == Py_None || obj == NULL) { - __Pyx_ZeroBuffer(buf); - return 0; - } buf->buf = NULL; - if (__Pyx_GetBuffer(obj, buf, flags) == -1) goto fail; - if (buf->ndim != nd) { + if (unlikely(__Pyx_GetBuffer(obj, buf, flags) == -1)) { + __Pyx_ZeroBuffer(buf); + return -1; + } + if (unlikely(buf->ndim != nd)) { PyErr_Format(PyExc_ValueError, "Buffer has wrong number of dimensions (expected %d, got %d)", nd, buf->ndim); @@ -18822,7 +21509,7 @@ static CYTHON_INLINE int __Pyx_GetBufferAndValidate( __Pyx_BufFmt_Init(&ctx, stack, dtype); if (!__Pyx_BufFmt_CheckString(&ctx, buf->format)) goto fail; } - if ((unsigned)buf->itemsize != dtype->size) { + if (unlikely((unsigned)buf->itemsize != dtype->size)) { PyErr_Format(PyExc_ValueError, "Item size of buffer (%" CYTHON_FORMAT_SSIZE_T "d byte%s) does not match size of '%s' (%" CYTHON_FORMAT_SSIZE_T "d byte%s)", buf->itemsize, (buf->itemsize > 1) ? "s" : "", @@ -18832,19 +21519,14 @@ static CYTHON_INLINE int __Pyx_GetBufferAndValidate( if (buf->suboffsets == NULL) buf->suboffsets = __Pyx_minusones; return 0; fail:; - __Pyx_ZeroBuffer(buf); + __Pyx_SafeReleaseBuffer(buf); return -1; } -static CYTHON_INLINE void __Pyx_SafeReleaseBuffer(Py_buffer* info) { - if (info->buf == NULL) return; - if (info->suboffsets == __Pyx_minusones) info->suboffsets = NULL; - __Pyx_ReleaseBuffer(info); -} -static CYTHON_INLINE void __Pyx_ErrRestore(PyObject *type, PyObject *value, PyObject *tb) { -#if CYTHON_COMPILING_IN_CPYTHON +/* PyErrFetchRestore */ + #if CYTHON_FAST_THREAD_STATE +static CYTHON_INLINE void __Pyx_ErrRestoreInState(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb) { PyObject *tmp_type, *tmp_value, *tmp_tb; - PyThreadState *tstate = PyThreadState_GET(); tmp_type = tstate->curexc_type; tmp_value = tstate->curexc_value; tmp_tb = tstate->curexc_traceback; @@ -18854,25 +21536,19 @@ static CYTHON_INLINE void __Pyx_ErrRestore(PyObject *type, PyObject *value, PyOb Py_XDECREF(tmp_type); Py_XDECREF(tmp_value); Py_XDECREF(tmp_tb); -#else - PyErr_Restore(type, value, tb); -#endif } -static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb) { -#if CYTHON_COMPILING_IN_CPYTHON - PyThreadState *tstate = PyThreadState_GET(); +static CYTHON_INLINE void __Pyx_ErrFetchInState(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb) { *type = tstate->curexc_type; *value = tstate->curexc_value; *tb = tstate->curexc_traceback; tstate->curexc_type = 0; tstate->curexc_value = 0; tstate->curexc_traceback = 0; -#else - PyErr_Fetch(type, value, tb); -#endif } +#endif -static int +/* MemviewSliceInit */ + static int __Pyx_init_memviewslice(struct __pyx_memoryview_obj *memview, int ndim, __Pyx_memviewslice *memviewslice, @@ -18925,7 +21601,10 @@ no_fail: __Pyx_RefNannyFinishContext(); return retval; } -static CYTHON_INLINE void __pyx_fatalerror(const char *fmt, ...) { +#ifndef Py_NO_RETURN +#define Py_NO_RETURN +#endif +static void __pyx_fatalerror(const char *fmt, ...) Py_NO_RETURN { va_list vargs; char msg[200]; #ifdef HAVE_STDARG_PROTOTYPES @@ -18934,8 +21613,8 @@ static CYTHON_INLINE void __pyx_fatalerror(const char *fmt, ...) { va_start(vargs); #endif vsnprintf(msg, 200, fmt, vargs); - Py_FatalError(msg); va_end(vargs); + Py_FatalError(msg); } static CYTHON_INLINE int __pyx_add_acquisition_count_locked(__pyx_atomic_int *acquisition_count, @@ -19006,7 +21685,8 @@ static CYTHON_INLINE void __Pyx_XDEC_MEMVIEW(__Pyx_memviewslice *memslice, } } -#if CYTHON_COMPILING_IN_CPYTHON +/* PyObjectCall */ + #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyObject_Call(PyObject *func, PyObject *arg, PyObject *kw) { PyObject *result; ternaryfunc call = func->ob_type->tp_call; @@ -19025,9 +21705,11 @@ static CYTHON_INLINE PyObject* __Pyx_PyObject_Call(PyObject *func, PyObject *arg } #endif -#if PY_MAJOR_VERSION < 3 +/* RaiseException */ + #if PY_MAJOR_VERSION < 3 static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, CYTHON_UNUSED PyObject *cause) { + __Pyx_PyThreadState_declare Py_XINCREF(type); if (!value || value == Py_None) value = NULL; @@ -19066,6 +21748,7 @@ static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, goto raise_error; } } + __Pyx_PyThreadState_assign __Pyx_ErrRestore(type, value, tb); return; raise_error: @@ -19138,11 +21821,7 @@ static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject "raise: exception class must be a subclass of BaseException"); goto bad; } -#if PY_VERSION_HEX >= 0x03030000 if (cause) { -#else - if (cause && cause != Py_None) { -#endif PyObject *fixed_cause; if (cause == Py_None) { fixed_cause = NULL; @@ -19170,7 +21849,7 @@ static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject PyErr_Restore(tmp_type, tmp_value, tb); Py_XDECREF(tmp_tb); #else - PyThreadState *tstate = PyThreadState_GET(); + PyThreadState *tstate = __Pyx_PyThreadState_Current; PyObject* tmp_tb = tstate->curexc_traceback; if (tb != tmp_tb) { Py_INCREF(tb); @@ -19185,34 +21864,449 @@ bad: } #endif -static CYTHON_INLINE void __Pyx_RaiseTooManyValuesError(Py_ssize_t expected) { +/* PyCFunctionFastCall */ + #if CYTHON_FAST_PYCCALL +static CYTHON_INLINE PyObject * __Pyx_PyCFunction_FastCall(PyObject *func_obj, PyObject **args, Py_ssize_t nargs) { + PyCFunctionObject *func = (PyCFunctionObject*)func_obj; + PyCFunction meth = PyCFunction_GET_FUNCTION(func); + PyObject *self = PyCFunction_GET_SELF(func); + int flags = PyCFunction_GET_FLAGS(func); + assert(PyCFunction_Check(func)); + assert(METH_FASTCALL == (flags & ~(METH_CLASS | METH_STATIC | METH_COEXIST | METH_KEYWORDS | METH_STACKLESS))); + assert(nargs >= 0); + assert(nargs == 0 || args != NULL); + /* _PyCFunction_FastCallDict() must not be called with an exception set, + because it may clear it (directly or indirectly) and so the + caller loses its exception */ + assert(!PyErr_Occurred()); + if ((PY_VERSION_HEX < 0x030700A0) || unlikely(flags & METH_KEYWORDS)) { + return (*((__Pyx_PyCFunctionFastWithKeywords)(void*)meth)) (self, args, nargs, NULL); + } else { + return (*((__Pyx_PyCFunctionFast)(void*)meth)) (self, args, nargs); + } +} +#endif + +/* PyFunctionFastCall */ + #if CYTHON_FAST_PYCALL +static PyObject* __Pyx_PyFunction_FastCallNoKw(PyCodeObject *co, PyObject **args, Py_ssize_t na, + PyObject *globals) { + PyFrameObject *f; + PyThreadState *tstate = __Pyx_PyThreadState_Current; + PyObject **fastlocals; + Py_ssize_t i; + PyObject *result; + assert(globals != NULL); + /* XXX Perhaps we should create a specialized + PyFrame_New() that doesn't take locals, but does + take builtins without sanity checking them. + */ + assert(tstate != NULL); + f = PyFrame_New(tstate, co, globals, NULL); + if (f == NULL) { + return NULL; + } + fastlocals = __Pyx_PyFrame_GetLocalsplus(f); + for (i = 0; i < na; i++) { + Py_INCREF(*args); + fastlocals[i] = *args++; + } + result = PyEval_EvalFrameEx(f,0); + ++tstate->recursion_depth; + Py_DECREF(f); + --tstate->recursion_depth; + return result; +} +#if 1 || PY_VERSION_HEX < 0x030600B1 +static PyObject *__Pyx_PyFunction_FastCallDict(PyObject *func, PyObject **args, int nargs, PyObject *kwargs) { + PyCodeObject *co = (PyCodeObject *)PyFunction_GET_CODE(func); + PyObject *globals = PyFunction_GET_GLOBALS(func); + PyObject *argdefs = PyFunction_GET_DEFAULTS(func); + PyObject *closure; +#if PY_MAJOR_VERSION >= 3 + PyObject *kwdefs; +#endif + PyObject *kwtuple, **k; + PyObject **d; + Py_ssize_t nd; + Py_ssize_t nk; + PyObject *result; + assert(kwargs == NULL || PyDict_Check(kwargs)); + nk = kwargs ? PyDict_Size(kwargs) : 0; + if (Py_EnterRecursiveCall((char*)" while calling a Python object")) { + return NULL; + } + if ( +#if PY_MAJOR_VERSION >= 3 + co->co_kwonlyargcount == 0 && +#endif + likely(kwargs == NULL || nk == 0) && + co->co_flags == (CO_OPTIMIZED | CO_NEWLOCALS | CO_NOFREE)) { + if (argdefs == NULL && co->co_argcount == nargs) { + result = __Pyx_PyFunction_FastCallNoKw(co, args, nargs, globals); + goto done; + } + else if (nargs == 0 && argdefs != NULL + && co->co_argcount == Py_SIZE(argdefs)) { + /* function called with no arguments, but all parameters have + a default value: use default values as arguments .*/ + args = &PyTuple_GET_ITEM(argdefs, 0); + result =__Pyx_PyFunction_FastCallNoKw(co, args, Py_SIZE(argdefs), globals); + goto done; + } + } + if (kwargs != NULL) { + Py_ssize_t pos, i; + kwtuple = PyTuple_New(2 * nk); + if (kwtuple == NULL) { + result = NULL; + goto done; + } + k = &PyTuple_GET_ITEM(kwtuple, 0); + pos = i = 0; + while (PyDict_Next(kwargs, &pos, &k[i], &k[i+1])) { + Py_INCREF(k[i]); + Py_INCREF(k[i+1]); + i += 2; + } + nk = i / 2; + } + else { + kwtuple = NULL; + k = NULL; + } + closure = PyFunction_GET_CLOSURE(func); +#if PY_MAJOR_VERSION >= 3 + kwdefs = PyFunction_GET_KW_DEFAULTS(func); +#endif + if (argdefs != NULL) { + d = &PyTuple_GET_ITEM(argdefs, 0); + nd = Py_SIZE(argdefs); + } + else { + d = NULL; + nd = 0; + } +#if PY_MAJOR_VERSION >= 3 + result = PyEval_EvalCodeEx((PyObject*)co, globals, (PyObject *)NULL, + args, nargs, + k, (int)nk, + d, (int)nd, kwdefs, closure); +#else + result = PyEval_EvalCodeEx(co, globals, (PyObject *)NULL, + args, nargs, + k, (int)nk, + d, (int)nd, closure); +#endif + Py_XDECREF(kwtuple); +done: + Py_LeaveRecursiveCall(); + return result; +} +#endif +#endif + +/* PyObjectCallMethO */ + #if CYTHON_COMPILING_IN_CPYTHON +static CYTHON_INLINE PyObject* __Pyx_PyObject_CallMethO(PyObject *func, PyObject *arg) { + PyObject *self, *result; + PyCFunction cfunc; + cfunc = PyCFunction_GET_FUNCTION(func); + self = PyCFunction_GET_SELF(func); + if (unlikely(Py_EnterRecursiveCall((char*)" while calling a Python object"))) + return NULL; + result = cfunc(self, arg); + Py_LeaveRecursiveCall(); + if (unlikely(!result) && unlikely(!PyErr_Occurred())) { + PyErr_SetString( + PyExc_SystemError, + "NULL result without error in PyObject_Call"); + } + return result; +} +#endif + +/* PyObjectCallOneArg */ + #if CYTHON_COMPILING_IN_CPYTHON +static PyObject* __Pyx__PyObject_CallOneArg(PyObject *func, PyObject *arg) { + PyObject *result; + PyObject *args = PyTuple_New(1); + if (unlikely(!args)) return NULL; + Py_INCREF(arg); + PyTuple_SET_ITEM(args, 0, arg); + result = __Pyx_PyObject_Call(func, args, NULL); + Py_DECREF(args); + return result; +} +static CYTHON_INLINE PyObject* __Pyx_PyObject_CallOneArg(PyObject *func, PyObject *arg) { +#if CYTHON_FAST_PYCALL + if (PyFunction_Check(func)) { + return __Pyx_PyFunction_FastCall(func, &arg, 1); + } +#endif + if (likely(PyCFunction_Check(func))) { + if (likely(PyCFunction_GET_FLAGS(func) & METH_O)) { + return __Pyx_PyObject_CallMethO(func, arg); +#if CYTHON_FAST_PYCCALL + } else if (PyCFunction_GET_FLAGS(func) & METH_FASTCALL) { + return __Pyx_PyCFunction_FastCall(func, &arg, 1); +#endif + } + } + return __Pyx__PyObject_CallOneArg(func, arg); +} +#else +static CYTHON_INLINE PyObject* __Pyx_PyObject_CallOneArg(PyObject *func, PyObject *arg) { + PyObject *result; + PyObject *args = PyTuple_Pack(1, arg); + if (unlikely(!args)) return NULL; + result = __Pyx_PyObject_Call(func, args, NULL); + Py_DECREF(args); + return result; +} +#endif + +/* DictGetItem */ + #if PY_MAJOR_VERSION >= 3 && !CYTHON_COMPILING_IN_PYPY +static PyObject *__Pyx_PyDict_GetItem(PyObject *d, PyObject* key) { + PyObject *value; + value = PyDict_GetItemWithError(d, key); + if (unlikely(!value)) { + if (!PyErr_Occurred()) { + if (unlikely(PyTuple_Check(key))) { + PyObject* args = PyTuple_Pack(1, key); + if (likely(args)) { + PyErr_SetObject(PyExc_KeyError, args); + Py_DECREF(args); + } + } else { + PyErr_SetObject(PyExc_KeyError, key); + } + } + return NULL; + } + Py_INCREF(value); + return value; +} +#endif + +/* RaiseTooManyValuesToUnpack */ + static CYTHON_INLINE void __Pyx_RaiseTooManyValuesError(Py_ssize_t expected) { PyErr_Format(PyExc_ValueError, "too many values to unpack (expected %" CYTHON_FORMAT_SSIZE_T "d)", expected); } -static CYTHON_INLINE void __Pyx_RaiseNeedMoreValuesError(Py_ssize_t index) { +/* RaiseNeedMoreValuesToUnpack */ + static CYTHON_INLINE void __Pyx_RaiseNeedMoreValuesError(Py_ssize_t index) { PyErr_Format(PyExc_ValueError, "need more than %" CYTHON_FORMAT_SSIZE_T "d value%.1s to unpack", index, (index == 1) ? "" : "s"); } -static CYTHON_INLINE void __Pyx_RaiseNoneNotIterableError(void) { +/* RaiseNoneIterError */ + static CYTHON_INLINE void __Pyx_RaiseNoneNotIterableError(void) { PyErr_SetString(PyExc_TypeError, "'NoneType' object is not iterable"); } -static CYTHON_INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type) { +/* ExtTypeTest */ + static CYTHON_INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type) { if (unlikely(!type)) { PyErr_SetString(PyExc_SystemError, "Missing type object"); return 0; } - if (likely(PyObject_TypeCheck(obj, type))) + if (likely(__Pyx_TypeCheck(obj, type))) return 1; PyErr_Format(PyExc_TypeError, "Cannot convert %.200s to %.200s", Py_TYPE(obj)->tp_name, type->tp_name); return 0; } -static CYTHON_INLINE int __Pyx_PyBytes_Equals(PyObject* s1, PyObject* s2, int equals) { +/* GetTopmostException */ + #if CYTHON_USE_EXC_INFO_STACK +static _PyErr_StackItem * +__Pyx_PyErr_GetTopmostException(PyThreadState *tstate) +{ + _PyErr_StackItem *exc_info = tstate->exc_info; + while ((exc_info->exc_type == NULL || exc_info->exc_type == Py_None) && + exc_info->previous_item != NULL) + { + exc_info = exc_info->previous_item; + } + return exc_info; +} +#endif + +/* SaveResetException */ + #if CYTHON_FAST_THREAD_STATE +static CYTHON_INLINE void __Pyx__ExceptionSave(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb) { + #if CYTHON_USE_EXC_INFO_STACK + _PyErr_StackItem *exc_info = __Pyx_PyErr_GetTopmostException(tstate); + *type = exc_info->exc_type; + *value = exc_info->exc_value; + *tb = exc_info->exc_traceback; + #else + *type = tstate->exc_type; + *value = tstate->exc_value; + *tb = tstate->exc_traceback; + #endif + Py_XINCREF(*type); + Py_XINCREF(*value); + Py_XINCREF(*tb); +} +static CYTHON_INLINE void __Pyx__ExceptionReset(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb) { + PyObject *tmp_type, *tmp_value, *tmp_tb; + #if CYTHON_USE_EXC_INFO_STACK + _PyErr_StackItem *exc_info = tstate->exc_info; + tmp_type = exc_info->exc_type; + tmp_value = exc_info->exc_value; + tmp_tb = exc_info->exc_traceback; + exc_info->exc_type = type; + exc_info->exc_value = value; + exc_info->exc_traceback = tb; + #else + tmp_type = tstate->exc_type; + tmp_value = tstate->exc_value; + tmp_tb = tstate->exc_traceback; + tstate->exc_type = type; + tstate->exc_value = value; + tstate->exc_traceback = tb; + #endif + Py_XDECREF(tmp_type); + Py_XDECREF(tmp_value); + Py_XDECREF(tmp_tb); +} +#endif + +/* PyErrExceptionMatches */ + #if CYTHON_FAST_THREAD_STATE +static int __Pyx_PyErr_ExceptionMatchesTuple(PyObject *exc_type, PyObject *tuple) { + Py_ssize_t i, n; + n = PyTuple_GET_SIZE(tuple); +#if PY_MAJOR_VERSION >= 3 + for (i=0; icurexc_type; + if (exc_type == err) return 1; + if (unlikely(!exc_type)) return 0; + if (unlikely(PyTuple_Check(err))) + return __Pyx_PyErr_ExceptionMatchesTuple(exc_type, err); + return __Pyx_PyErr_GivenExceptionMatches(exc_type, err); +} +#endif + +/* GetException */ + #if CYTHON_FAST_THREAD_STATE +static int __Pyx__GetException(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb) +#else +static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb) +#endif +{ + PyObject *local_type, *local_value, *local_tb; +#if CYTHON_FAST_THREAD_STATE + PyObject *tmp_type, *tmp_value, *tmp_tb; + local_type = tstate->curexc_type; + local_value = tstate->curexc_value; + local_tb = tstate->curexc_traceback; + tstate->curexc_type = 0; + tstate->curexc_value = 0; + tstate->curexc_traceback = 0; +#else + PyErr_Fetch(&local_type, &local_value, &local_tb); +#endif + PyErr_NormalizeException(&local_type, &local_value, &local_tb); +#if CYTHON_FAST_THREAD_STATE + if (unlikely(tstate->curexc_type)) +#else + if (unlikely(PyErr_Occurred())) +#endif + goto bad; + #if PY_MAJOR_VERSION >= 3 + if (local_tb) { + if (unlikely(PyException_SetTraceback(local_value, local_tb) < 0)) + goto bad; + } + #endif + Py_XINCREF(local_tb); + Py_XINCREF(local_type); + Py_XINCREF(local_value); + *type = local_type; + *value = local_value; + *tb = local_tb; +#if CYTHON_FAST_THREAD_STATE + #if CYTHON_USE_EXC_INFO_STACK + { + _PyErr_StackItem *exc_info = tstate->exc_info; + tmp_type = exc_info->exc_type; + tmp_value = exc_info->exc_value; + tmp_tb = exc_info->exc_traceback; + exc_info->exc_type = local_type; + exc_info->exc_value = local_value; + exc_info->exc_traceback = local_tb; + } + #else + tmp_type = tstate->exc_type; + tmp_value = tstate->exc_value; + tmp_tb = tstate->exc_traceback; + tstate->exc_type = local_type; + tstate->exc_value = local_value; + tstate->exc_traceback = local_tb; + #endif + Py_XDECREF(tmp_type); + Py_XDECREF(tmp_value); + Py_XDECREF(tmp_tb); +#else + PyErr_SetExcInfo(local_type, local_value, local_tb); +#endif + return 0; +bad: + *type = 0; + *value = 0; + *tb = 0; + Py_XDECREF(local_type); + Py_XDECREF(local_value); + Py_XDECREF(local_tb); + return -1; +} + +/* PyObjectCall2Args */ + static CYTHON_UNUSED PyObject* __Pyx_PyObject_Call2Args(PyObject* function, PyObject* arg1, PyObject* arg2) { + PyObject *args, *result = NULL; + #if CYTHON_FAST_PYCALL + if (PyFunction_Check(function)) { + PyObject *args[2] = {arg1, arg2}; + return __Pyx_PyFunction_FastCall(function, args, 2); + } + #endif + #if CYTHON_FAST_PYCCALL + if (__Pyx_PyFastCFunction_Check(function)) { + PyObject *args[2] = {arg1, arg2}; + return __Pyx_PyCFunction_FastCall(function, args, 2); + } + #endif + args = PyTuple_New(2); + if (unlikely(!args)) goto done; + Py_INCREF(arg1); + PyTuple_SET_ITEM(args, 0, arg1); + Py_INCREF(arg2); + PyTuple_SET_ITEM(args, 1, arg2); + Py_INCREF(function); + result = __Pyx_PyObject_Call(function, args, NULL); + Py_DECREF(args); + Py_DECREF(function); +done: + return result; +} + +/* BytesEquals */ + static CYTHON_INLINE int __Pyx_PyBytes_Equals(PyObject* s1, PyObject* s2, int equals) { #if CYTHON_COMPILING_IN_PYPY return PyObject_RichCompareBool(s1, s2, equals); #else @@ -19230,7 +22324,16 @@ static CYTHON_INLINE int __Pyx_PyBytes_Equals(PyObject* s1, PyObject* s2, int eq } else if (length == 1) { return (equals == Py_EQ); } else { - int result = memcmp(ps1, ps2, (size_t)length); + int result; +#if CYTHON_USE_UNICODE_INTERNALS + Py_hash_t hash1, hash2; + hash1 = ((PyBytesObject*)s1)->ob_shash; + hash2 = ((PyBytesObject*)s2)->ob_shash; + if (hash1 != hash2 && hash1 != -1 && hash2 != -1) { + return (equals == Py_NE); + } +#endif + result = memcmp(ps1, ps2, (size_t)length); return (equals == Py_EQ) ? (result == 0) : (result != 0); } } else if ((s1 == Py_None) & PyBytes_CheckExact(s2)) { @@ -19249,7 +22352,8 @@ static CYTHON_INLINE int __Pyx_PyBytes_Equals(PyObject* s1, PyObject* s2, int eq #endif } -static CYTHON_INLINE int __Pyx_PyUnicode_Equals(PyObject* s1, PyObject* s2, int equals) { +/* UnicodeEquals */ + static CYTHON_INLINE int __Pyx_PyUnicode_Equals(PyObject* s1, PyObject* s2, int equals) { #if CYTHON_COMPILING_IN_PYPY return PyObject_RichCompareBool(s1, s2, equals); #else @@ -19289,6 +22393,21 @@ static CYTHON_INLINE int __Pyx_PyUnicode_Equals(PyObject* s1, PyObject* s2, int if (length != __Pyx_PyUnicode_GET_LENGTH(s2)) { goto return_ne; } +#if CYTHON_USE_UNICODE_INTERNALS + { + Py_hash_t hash1, hash2; + #if CYTHON_PEP393_ENABLED + hash1 = ((PyASCIIObject*)s1)->hash; + hash2 = ((PyASCIIObject*)s2)->hash; + #else + hash1 = ((PyUnicodeObject*)s1)->hash; + hash2 = ((PyUnicodeObject*)s2)->hash; + #endif + if (hash1 != hash2 && hash1 != -1 && hash2 != -1) { + goto return_ne; + } + } +#endif kind = __Pyx_PyUnicode_KIND(s1); if (kind != __Pyx_PyUnicode_KIND(s2)) { goto return_ne; @@ -19313,6 +22432,9 @@ static CYTHON_INLINE int __Pyx_PyUnicode_Equals(PyObject* s1, PyObject* s2, int } else { int result; PyObject* py_result = PyObject_RichCompare(s1, s2, equals); + #if PY_MAJOR_VERSION < 3 + Py_XDECREF(owned_ref); + #endif if (!py_result) return -1; result = __Pyx_PyObject_IsTrue(py_result); @@ -19332,15 +22454,17 @@ return_ne: #endif } -static CYTHON_INLINE Py_ssize_t __Pyx_div_Py_ssize_t(Py_ssize_t a, Py_ssize_t b) { +/* None */ + static CYTHON_INLINE Py_ssize_t __Pyx_div_Py_ssize_t(Py_ssize_t a, Py_ssize_t b) { Py_ssize_t q = a / b; Py_ssize_t r = a - q*b; q -= ((r != 0) & ((r ^ b) < 0)); return q; } -static CYTHON_INLINE PyObject *__Pyx_GetAttr(PyObject *o, PyObject *n) { -#if CYTHON_COMPILING_IN_CPYTHON +/* GetAttr */ + static CYTHON_INLINE PyObject *__Pyx_GetAttr(PyObject *o, PyObject *n) { +#if CYTHON_USE_TYPE_SLOTS #if PY_MAJOR_VERSION >= 3 if (likely(PyUnicode_Check(n))) #else @@ -19351,7 +22475,124 @@ static CYTHON_INLINE PyObject *__Pyx_GetAttr(PyObject *o, PyObject *n) { return PyObject_GetAttr(o, n); } -static CYTHON_INLINE PyObject* __Pyx_decode_c_string( +/* GetItemInt */ + static PyObject *__Pyx_GetItemInt_Generic(PyObject *o, PyObject* j) { + PyObject *r; + if (!j) return NULL; + r = PyObject_GetItem(o, j); + Py_DECREF(j); + return r; +} +static CYTHON_INLINE PyObject *__Pyx_GetItemInt_List_Fast(PyObject *o, Py_ssize_t i, + CYTHON_NCP_UNUSED int wraparound, + CYTHON_NCP_UNUSED int boundscheck) { +#if CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS + Py_ssize_t wrapped_i = i; + if (wraparound & unlikely(i < 0)) { + wrapped_i += PyList_GET_SIZE(o); + } + if ((!boundscheck) || likely(__Pyx_is_valid_index(wrapped_i, PyList_GET_SIZE(o)))) { + PyObject *r = PyList_GET_ITEM(o, wrapped_i); + Py_INCREF(r); + return r; + } + return __Pyx_GetItemInt_Generic(o, PyInt_FromSsize_t(i)); +#else + return PySequence_GetItem(o, i); +#endif +} +static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Tuple_Fast(PyObject *o, Py_ssize_t i, + CYTHON_NCP_UNUSED int wraparound, + CYTHON_NCP_UNUSED int boundscheck) { +#if CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS + Py_ssize_t wrapped_i = i; + if (wraparound & unlikely(i < 0)) { + wrapped_i += PyTuple_GET_SIZE(o); + } + if ((!boundscheck) || likely(__Pyx_is_valid_index(wrapped_i, PyTuple_GET_SIZE(o)))) { + PyObject *r = PyTuple_GET_ITEM(o, wrapped_i); + Py_INCREF(r); + return r; + } + return __Pyx_GetItemInt_Generic(o, PyInt_FromSsize_t(i)); +#else + return PySequence_GetItem(o, i); +#endif +} +static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Fast(PyObject *o, Py_ssize_t i, int is_list, + CYTHON_NCP_UNUSED int wraparound, + CYTHON_NCP_UNUSED int boundscheck) { +#if CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS && CYTHON_USE_TYPE_SLOTS + if (is_list || PyList_CheckExact(o)) { + Py_ssize_t n = ((!wraparound) | likely(i >= 0)) ? i : i + PyList_GET_SIZE(o); + if ((!boundscheck) || (likely(__Pyx_is_valid_index(n, PyList_GET_SIZE(o))))) { + PyObject *r = PyList_GET_ITEM(o, n); + Py_INCREF(r); + return r; + } + } + else if (PyTuple_CheckExact(o)) { + Py_ssize_t n = ((!wraparound) | likely(i >= 0)) ? i : i + PyTuple_GET_SIZE(o); + if ((!boundscheck) || likely(__Pyx_is_valid_index(n, PyTuple_GET_SIZE(o)))) { + PyObject *r = PyTuple_GET_ITEM(o, n); + Py_INCREF(r); + return r; + } + } else { + PySequenceMethods *m = Py_TYPE(o)->tp_as_sequence; + if (likely(m && m->sq_item)) { + if (wraparound && unlikely(i < 0) && likely(m->sq_length)) { + Py_ssize_t l = m->sq_length(o); + if (likely(l >= 0)) { + i += l; + } else { + if (!PyErr_ExceptionMatches(PyExc_OverflowError)) + return NULL; + PyErr_Clear(); + } + } + return m->sq_item(o, i); + } + } +#else + if (is_list || PySequence_Check(o)) { + return PySequence_GetItem(o, i); + } +#endif + return __Pyx_GetItemInt_Generic(o, PyInt_FromSsize_t(i)); +} + +/* ObjectGetItem */ + #if CYTHON_USE_TYPE_SLOTS +static PyObject *__Pyx_PyObject_GetIndex(PyObject *obj, PyObject* index) { + PyObject *runerr; + Py_ssize_t key_value; + PySequenceMethods *m = Py_TYPE(obj)->tp_as_sequence; + if (unlikely(!(m && m->sq_item))) { + PyErr_Format(PyExc_TypeError, "'%.200s' object is not subscriptable", Py_TYPE(obj)->tp_name); + return NULL; + } + key_value = __Pyx_PyIndex_AsSsize_t(index); + if (likely(key_value != -1 || !(runerr = PyErr_Occurred()))) { + return __Pyx_GetItemInt_Fast(obj, key_value, 0, 1, 1); + } + if (PyErr_GivenExceptionMatches(runerr, PyExc_OverflowError)) { + PyErr_Clear(); + PyErr_Format(PyExc_IndexError, "cannot fit '%.200s' into an index-sized integer", Py_TYPE(index)->tp_name); + } + return NULL; +} +static PyObject *__Pyx_PyObject_GetItem(PyObject *obj, PyObject* key) { + PyMappingMethods *m = Py_TYPE(obj)->tp_as_mapping; + if (likely(m && m->mp_subscript)) { + return m->mp_subscript(obj, key); + } + return __Pyx_PyObject_GetIndex(obj, key); +} +#endif + +/* decode_c_string */ + static CYTHON_INLINE PyObject* __Pyx_decode_c_string( const char* cstring, Py_ssize_t start, Py_ssize_t stop, const char* encoding, const char* errors, PyObject* (*decode_func)(const char *s, Py_ssize_t size, const char *errors)) { @@ -19383,120 +22624,99 @@ static CYTHON_INLINE PyObject* __Pyx_decode_c_string( } } -static CYTHON_INLINE void __Pyx_ExceptionSave(PyObject **type, PyObject **value, PyObject **tb) { -#if CYTHON_COMPILING_IN_CPYTHON - PyThreadState *tstate = PyThreadState_GET(); - *type = tstate->exc_type; - *value = tstate->exc_value; - *tb = tstate->exc_traceback; - Py_XINCREF(*type); - Py_XINCREF(*value); - Py_XINCREF(*tb); -#else - PyErr_GetExcInfo(type, value, tb); -#endif +/* GetAttr3 */ + static PyObject *__Pyx_GetAttr3Default(PyObject *d) { + __Pyx_PyThreadState_declare + __Pyx_PyThreadState_assign + if (unlikely(!__Pyx_PyErr_ExceptionMatches(PyExc_AttributeError))) + return NULL; + __Pyx_PyErr_Clear(); + Py_INCREF(d); + return d; } -static void __Pyx_ExceptionReset(PyObject *type, PyObject *value, PyObject *tb) { -#if CYTHON_COMPILING_IN_CPYTHON - PyObject *tmp_type, *tmp_value, *tmp_tb; - PyThreadState *tstate = PyThreadState_GET(); - tmp_type = tstate->exc_type; - tmp_value = tstate->exc_value; - tmp_tb = tstate->exc_traceback; - tstate->exc_type = type; - tstate->exc_value = value; - tstate->exc_traceback = tb; - Py_XDECREF(tmp_type); - Py_XDECREF(tmp_value); - Py_XDECREF(tmp_tb); -#else - PyErr_SetExcInfo(type, value, tb); -#endif +static CYTHON_INLINE PyObject *__Pyx_GetAttr3(PyObject *o, PyObject *n, PyObject *d) { + PyObject *r = __Pyx_GetAttr(o, n); + return (likely(r)) ? r : __Pyx_GetAttr3Default(d); } -static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb) { - PyObject *local_type, *local_value, *local_tb; -#if CYTHON_COMPILING_IN_CPYTHON - PyObject *tmp_type, *tmp_value, *tmp_tb; - PyThreadState *tstate = PyThreadState_GET(); - local_type = tstate->curexc_type; - local_value = tstate->curexc_value; - local_tb = tstate->curexc_traceback; - tstate->curexc_type = 0; - tstate->curexc_value = 0; - tstate->curexc_traceback = 0; +/* GetModuleGlobalName */ + #if CYTHON_USE_DICT_VERSIONS +static PyObject *__Pyx__GetModuleGlobalName(PyObject *name, PY_UINT64_T *dict_version, PyObject **dict_cached_value) #else - PyErr_Fetch(&local_type, &local_value, &local_tb); +static CYTHON_INLINE PyObject *__Pyx__GetModuleGlobalName(PyObject *name) #endif - PyErr_NormalizeException(&local_type, &local_value, &local_tb); -#if CYTHON_COMPILING_IN_CPYTHON - if (unlikely(tstate->curexc_type)) -#else - if (unlikely(PyErr_Occurred())) -#endif - goto bad; - #if PY_MAJOR_VERSION >= 3 - if (local_tb) { - if (unlikely(PyException_SetTraceback(local_value, local_tb) < 0)) - goto bad; +{ + PyObject *result; +#if !CYTHON_AVOID_BORROWED_REFS +#if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX >= 0x030500A1 + result = _PyDict_GetItem_KnownHash(__pyx_d, name, ((PyASCIIObject *) name)->hash); + __PYX_UPDATE_DICT_CACHE(__pyx_d, result, *dict_cached_value, *dict_version) + if (likely(result)) { + return __Pyx_NewRef(result); + } else if (unlikely(PyErr_Occurred())) { + return NULL; } - #endif - Py_XINCREF(local_tb); - Py_XINCREF(local_type); - Py_XINCREF(local_value); - *type = local_type; - *value = local_value; - *tb = local_tb; -#if CYTHON_COMPILING_IN_CPYTHON - tmp_type = tstate->exc_type; - tmp_value = tstate->exc_value; - tmp_tb = tstate->exc_traceback; - tstate->exc_type = local_type; - tstate->exc_value = local_value; - tstate->exc_traceback = local_tb; - Py_XDECREF(tmp_type); - Py_XDECREF(tmp_value); - Py_XDECREF(tmp_tb); #else - PyErr_SetExcInfo(local_type, local_value, local_tb); + result = PyDict_GetItem(__pyx_d, name); + __PYX_UPDATE_DICT_CACHE(__pyx_d, result, *dict_cached_value, *dict_version) + if (likely(result)) { + return __Pyx_NewRef(result); + } #endif - return 0; -bad: - *type = 0; - *value = 0; - *tb = 0; - Py_XDECREF(local_type); - Py_XDECREF(local_value); - Py_XDECREF(local_tb); - return -1; +#else + result = PyObject_GetItem(__pyx_d, name); + __PYX_UPDATE_DICT_CACHE(__pyx_d, result, *dict_cached_value, *dict_version) + if (likely(result)) { + return __Pyx_NewRef(result); + } + PyErr_Clear(); +#endif + return __Pyx_GetBuiltinName(name); } -static CYTHON_INLINE void __Pyx_ExceptionSwap(PyObject **type, PyObject **value, PyObject **tb) { +/* SwapException */ + #if CYTHON_FAST_THREAD_STATE +static CYTHON_INLINE void __Pyx__ExceptionSwap(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb) { PyObject *tmp_type, *tmp_value, *tmp_tb; -#if CYTHON_COMPILING_IN_CPYTHON - PyThreadState *tstate = PyThreadState_GET(); + #if CYTHON_USE_EXC_INFO_STACK + _PyErr_StackItem *exc_info = tstate->exc_info; + tmp_type = exc_info->exc_type; + tmp_value = exc_info->exc_value; + tmp_tb = exc_info->exc_traceback; + exc_info->exc_type = *type; + exc_info->exc_value = *value; + exc_info->exc_traceback = *tb; + #else tmp_type = tstate->exc_type; tmp_value = tstate->exc_value; tmp_tb = tstate->exc_traceback; tstate->exc_type = *type; tstate->exc_value = *value; tstate->exc_traceback = *tb; -#else - PyErr_GetExcInfo(&tmp_type, &tmp_value, &tmp_tb); - PyErr_SetExcInfo(*type, *value, *tb); -#endif + #endif *type = tmp_type; *value = tmp_value; *tb = tmp_tb; } +#else +static CYTHON_INLINE void __Pyx_ExceptionSwap(PyObject **type, PyObject **value, PyObject **tb) { + PyObject *tmp_type, *tmp_value, *tmp_tb; + PyErr_GetExcInfo(&tmp_type, &tmp_value, &tmp_tb); + PyErr_SetExcInfo(*type, *value, *tb); + *type = tmp_type; + *value = tmp_value; + *tb = tmp_tb; +} +#endif -static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level) { +/* Import */ + static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level) { PyObject *empty_list = 0; PyObject *module = 0; PyObject *global_dict = 0; PyObject *empty_dict = 0; PyObject *list; - #if PY_VERSION_HEX < 0x03030000 + #if PY_MAJOR_VERSION < 3 PyObject *py_import; py_import = __Pyx_PyObject_GetAttrStr(__pyx_b, __pyx_n_s_import); if (!py_import) @@ -19520,17 +22740,8 @@ static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level) { #if PY_MAJOR_VERSION >= 3 if (level == -1) { if (strchr(__Pyx_MODULE_NAME, '.')) { - #if PY_VERSION_HEX < 0x03030000 - PyObject *py_level = PyInt_FromLong(1); - if (!py_level) - goto bad; - module = PyObject_CallFunctionObjArgs(py_import, - name, global_dict, empty_dict, list, py_level, NULL); - Py_DECREF(py_level); - #else module = PyImport_ImportModuleLevelObject( name, global_dict, empty_dict, list, 1); - #endif if (!module) { if (!PyErr_ExceptionMatches(PyExc_ImportError)) goto bad; @@ -19541,12 +22752,12 @@ static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level) { } #endif if (!module) { - #if PY_VERSION_HEX < 0x03030000 + #if PY_MAJOR_VERSION < 3 PyObject *py_level = PyInt_FromLong(level); if (!py_level) goto bad; module = PyObject_CallFunctionObjArgs(py_import, - name, global_dict, empty_dict, list, py_level, NULL); + name, global_dict, empty_dict, list, py_level, (PyObject *)NULL); Py_DECREF(py_level); #else module = PyImport_ImportModuleLevelObject( @@ -19555,7 +22766,7 @@ static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level) { } } bad: - #if PY_VERSION_HEX < 0x03030000 + #if PY_MAJOR_VERSION < 3 Py_XDECREF(py_import); #endif Py_XDECREF(empty_list); @@ -19563,92 +22774,108 @@ bad: return module; } -static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Generic(PyObject *o, PyObject* j) { - PyObject *r; - if (!j) return NULL; - r = PyObject_GetItem(o, j); - Py_DECREF(j); - return r; -} -static CYTHON_INLINE PyObject *__Pyx_GetItemInt_List_Fast(PyObject *o, Py_ssize_t i, - CYTHON_NCP_UNUSED int wraparound, - CYTHON_NCP_UNUSED int boundscheck) { -#if CYTHON_COMPILING_IN_CPYTHON - if (wraparound & unlikely(i < 0)) i += PyList_GET_SIZE(o); - if ((!boundscheck) || likely((0 <= i) & (i < PyList_GET_SIZE(o)))) { - PyObject *r = PyList_GET_ITEM(o, i); - Py_INCREF(r); - return r; +/* FastTypeChecks */ + #if CYTHON_COMPILING_IN_CPYTHON +static int __Pyx_InBases(PyTypeObject *a, PyTypeObject *b) { + while (a) { + a = a->tp_base; + if (a == b) + return 1; } - return __Pyx_GetItemInt_Generic(o, PyInt_FromSsize_t(i)); -#else - return PySequence_GetItem(o, i); -#endif + return b == &PyBaseObject_Type; } -static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Tuple_Fast(PyObject *o, Py_ssize_t i, - CYTHON_NCP_UNUSED int wraparound, - CYTHON_NCP_UNUSED int boundscheck) { -#if CYTHON_COMPILING_IN_CPYTHON - if (wraparound & unlikely(i < 0)) i += PyTuple_GET_SIZE(o); - if ((!boundscheck) || likely((0 <= i) & (i < PyTuple_GET_SIZE(o)))) { - PyObject *r = PyTuple_GET_ITEM(o, i); - Py_INCREF(r); - return r; +static CYTHON_INLINE int __Pyx_IsSubtype(PyTypeObject *a, PyTypeObject *b) { + PyObject *mro; + if (a == b) return 1; + mro = a->tp_mro; + if (likely(mro)) { + Py_ssize_t i, n; + n = PyTuple_GET_SIZE(mro); + for (i = 0; i < n; i++) { + if (PyTuple_GET_ITEM(mro, i) == (PyObject *)b) + return 1; + } + return 0; } - return __Pyx_GetItemInt_Generic(o, PyInt_FromSsize_t(i)); -#else - return PySequence_GetItem(o, i); -#endif + return __Pyx_InBases(a, b); } -static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Fast(PyObject *o, Py_ssize_t i, int is_list, - CYTHON_NCP_UNUSED int wraparound, - CYTHON_NCP_UNUSED int boundscheck) { -#if CYTHON_COMPILING_IN_CPYTHON - if (is_list || PyList_CheckExact(o)) { - Py_ssize_t n = ((!wraparound) | likely(i >= 0)) ? i : i + PyList_GET_SIZE(o); - if ((!boundscheck) || (likely((n >= 0) & (n < PyList_GET_SIZE(o))))) { - PyObject *r = PyList_GET_ITEM(o, n); - Py_INCREF(r); - return r; - } - } - else if (PyTuple_CheckExact(o)) { - Py_ssize_t n = ((!wraparound) | likely(i >= 0)) ? i : i + PyTuple_GET_SIZE(o); - if ((!boundscheck) || likely((n >= 0) & (n < PyTuple_GET_SIZE(o)))) { - PyObject *r = PyTuple_GET_ITEM(o, n); - Py_INCREF(r); - return r; - } - } else { - PySequenceMethods *m = Py_TYPE(o)->tp_as_sequence; - if (likely(m && m->sq_item)) { - if (wraparound && unlikely(i < 0) && likely(m->sq_length)) { - Py_ssize_t l = m->sq_length(o); - if (likely(l >= 0)) { - i += l; - } else { - if (PyErr_ExceptionMatches(PyExc_OverflowError)) - PyErr_Clear(); - else - return NULL; - } - } - return m->sq_item(o, i); +#if PY_MAJOR_VERSION == 2 +static int __Pyx_inner_PyErr_GivenExceptionMatches2(PyObject *err, PyObject* exc_type1, PyObject* exc_type2) { + PyObject *exception, *value, *tb; + int res; + __Pyx_PyThreadState_declare + __Pyx_PyThreadState_assign + __Pyx_ErrFetch(&exception, &value, &tb); + res = exc_type1 ? PyObject_IsSubclass(err, exc_type1) : 0; + if (unlikely(res == -1)) { + PyErr_WriteUnraisable(err); + res = 0; + } + if (!res) { + res = PyObject_IsSubclass(err, exc_type2); + if (unlikely(res == -1)) { + PyErr_WriteUnraisable(err); + res = 0; } } + __Pyx_ErrRestore(exception, value, tb); + return res; +} #else - if (is_list || PySequence_Check(o)) { - return PySequence_GetItem(o, i); +static CYTHON_INLINE int __Pyx_inner_PyErr_GivenExceptionMatches2(PyObject *err, PyObject* exc_type1, PyObject *exc_type2) { + int res = exc_type1 ? __Pyx_IsSubtype((PyTypeObject*)err, (PyTypeObject*)exc_type1) : 0; + if (!res) { + res = __Pyx_IsSubtype((PyTypeObject*)err, (PyTypeObject*)exc_type2); + } + return res; +} +#endif +static int __Pyx_PyErr_GivenExceptionMatchesTuple(PyObject *exc_type, PyObject *tuple) { + Py_ssize_t i, n; + assert(PyExceptionClass_Check(exc_type)); + n = PyTuple_GET_SIZE(tuple); +#if PY_MAJOR_VERSION >= 3 + for (i=0; inb_add(op1, op2); } #endif - #if CYTHON_USE_PYLONG_INTERNALS && PY_MAJOR_VERSION >= 3 + #if CYTHON_USE_PYLONG_INTERNALS if (likely(PyLong_CheckExact(op1))) { const long b = intval; long a, x; +#ifdef HAVE_LONG_LONG const PY_LONG_LONG llb = intval; PY_LONG_LONG lla, llx; +#endif const digit* digits = ((PyLongObject*)op1)->ob_digit; const Py_ssize_t size = Py_SIZE(op1); if (likely(__Pyx_sst_abs(size) <= 1)) { @@ -19678,58 +22907,80 @@ static PyObject* __Pyx_PyInt_AddObjC(PyObject *op1, PyObject *op2, CYTHON_UNUSED if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) { a = -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); break; +#ifdef HAVE_LONG_LONG } else if (8 * sizeof(PY_LONG_LONG) - 1 > 2 * PyLong_SHIFT) { lla = -(PY_LONG_LONG) (((((unsigned PY_LONG_LONG)digits[1]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[0])); goto long_long; +#endif } + CYTHON_FALLTHROUGH; case 2: if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) { a = (long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); break; +#ifdef HAVE_LONG_LONG } else if (8 * sizeof(PY_LONG_LONG) - 1 > 2 * PyLong_SHIFT) { lla = (PY_LONG_LONG) (((((unsigned PY_LONG_LONG)digits[1]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[0])); goto long_long; +#endif } + CYTHON_FALLTHROUGH; case -3: if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) { a = -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); break; +#ifdef HAVE_LONG_LONG } else if (8 * sizeof(PY_LONG_LONG) - 1 > 3 * PyLong_SHIFT) { lla = -(PY_LONG_LONG) (((((((unsigned PY_LONG_LONG)digits[2]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[1]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[0])); goto long_long; +#endif } + CYTHON_FALLTHROUGH; case 3: if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) { a = (long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); break; +#ifdef HAVE_LONG_LONG } else if (8 * sizeof(PY_LONG_LONG) - 1 > 3 * PyLong_SHIFT) { lla = (PY_LONG_LONG) (((((((unsigned PY_LONG_LONG)digits[2]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[1]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[0])); goto long_long; +#endif } + CYTHON_FALLTHROUGH; case -4: if (8 * sizeof(long) - 1 > 4 * PyLong_SHIFT) { a = -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); break; +#ifdef HAVE_LONG_LONG } else if (8 * sizeof(PY_LONG_LONG) - 1 > 4 * PyLong_SHIFT) { lla = -(PY_LONG_LONG) (((((((((unsigned PY_LONG_LONG)digits[3]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[2]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[1]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[0])); goto long_long; +#endif } + CYTHON_FALLTHROUGH; case 4: if (8 * sizeof(long) - 1 > 4 * PyLong_SHIFT) { a = (long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); break; +#ifdef HAVE_LONG_LONG } else if (8 * sizeof(PY_LONG_LONG) - 1 > 4 * PyLong_SHIFT) { lla = (PY_LONG_LONG) (((((((((unsigned PY_LONG_LONG)digits[3]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[2]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[1]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[0])); goto long_long; +#endif } + CYTHON_FALLTHROUGH; default: return PyLong_Type.tp_as_number->nb_add(op1, op2); } } x = a + b; return PyLong_FromLong(x); +#ifdef HAVE_LONG_LONG long_long: llx = lla + llb; return PyLong_FromLongLong(llx); +#endif + + } #endif if (PyFloat_CheckExact(op1)) { @@ -19745,27 +22996,35 @@ static PyObject* __Pyx_PyInt_AddObjC(PyObject *op1, PyObject *op2, CYTHON_UNUSED } #endif -static CYTHON_INLINE void __Pyx_RaiseUnboundLocalError(const char *varname) { +/* None */ + static CYTHON_INLINE void __Pyx_RaiseUnboundLocalError(const char *varname) { PyErr_Format(PyExc_UnboundLocalError, "local variable '%s' referenced before assignment", varname); } -static CYTHON_INLINE long __Pyx_div_long(long a, long b) { +/* None */ + static CYTHON_INLINE long __Pyx_div_long(long a, long b) { long q = a / b; long r = a - q*b; q -= ((r != 0) & ((r ^ b) < 0)); return q; } -static void __Pyx_WriteUnraisable(const char *name, CYTHON_UNUSED int clineno, +/* WriteUnraisableException */ + static void __Pyx_WriteUnraisable(const char *name, CYTHON_UNUSED int clineno, CYTHON_UNUSED int lineno, CYTHON_UNUSED const char *filename, int full_traceback, CYTHON_UNUSED int nogil) { PyObject *old_exc, *old_val, *old_tb; PyObject *ctx; + __Pyx_PyThreadState_declare #ifdef WITH_THREAD PyGILState_STATE state; if (nogil) state = PyGILState_Ensure(); +#ifdef _MSC_VER + else state = (PyGILState_STATE)-1; #endif +#endif + __Pyx_PyThreadState_assign __Pyx_ErrFetch(&old_exc, &old_val, &old_tb); if (full_traceback) { Py_XINCREF(old_exc); @@ -19792,56 +23051,90 @@ static void __Pyx_WriteUnraisable(const char *name, CYTHON_UNUSED int clineno, #endif } -#if CYTHON_COMPILING_IN_CPYTHON -static CYTHON_INLINE PyObject* __Pyx_PyObject_CallMethO(PyObject *func, PyObject *arg) { - PyObject *self, *result; - PyCFunction cfunc; - cfunc = PyCFunction_GET_FUNCTION(func); - self = PyCFunction_GET_SELF(func); - if (unlikely(Py_EnterRecursiveCall((char*)" while calling a Python object"))) - return NULL; - result = cfunc(self, arg); - Py_LeaveRecursiveCall(); - if (unlikely(!result) && unlikely(!PyErr_Occurred())) { - PyErr_SetString( - PyExc_SystemError, - "NULL result without error in PyObject_Call"); +/* ImportFrom */ + static PyObject* __Pyx_ImportFrom(PyObject* module, PyObject* name) { + PyObject* value = __Pyx_PyObject_GetAttrStr(module, name); + if (unlikely(!value) && PyErr_ExceptionMatches(PyExc_AttributeError)) { + PyErr_Format(PyExc_ImportError, + #if PY_MAJOR_VERSION < 3 + "cannot import name %.230s", PyString_AS_STRING(name)); + #else + "cannot import name %S", name); + #endif } - return result; + return value; } -#endif -#if CYTHON_COMPILING_IN_CPYTHON -static PyObject* __Pyx__PyObject_CallOneArg(PyObject *func, PyObject *arg) { - PyObject *result; - PyObject *args = PyTuple_New(1); - if (unlikely(!args)) return NULL; - Py_INCREF(arg); - PyTuple_SET_ITEM(args, 0, arg); - result = __Pyx_PyObject_Call(func, args, NULL); - Py_DECREF(args); - return result; +/* HasAttr */ + static CYTHON_INLINE int __Pyx_HasAttr(PyObject *o, PyObject *n) { + PyObject *r; + if (unlikely(!__Pyx_PyBaseString_Check(n))) { + PyErr_SetString(PyExc_TypeError, + "hasattr(): attribute name must be string"); + return -1; + } + r = __Pyx_GetAttr(o, n); + if (unlikely(!r)) { + PyErr_Clear(); + return 0; + } else { + Py_DECREF(r); + return 1; + } } -static CYTHON_INLINE PyObject* __Pyx_PyObject_CallOneArg(PyObject *func, PyObject *arg) { -#ifdef __Pyx_CyFunction_USED - if (likely(PyCFunction_Check(func) || PyObject_TypeCheck(func, __pyx_CyFunctionType))) { + +/* PyObject_GenericGetAttrNoDict */ + #if CYTHON_USE_TYPE_SLOTS && CYTHON_USE_PYTYPE_LOOKUP && PY_VERSION_HEX < 0x03070000 +static PyObject *__Pyx_RaiseGenericGetAttributeError(PyTypeObject *tp, PyObject *attr_name) { + PyErr_Format(PyExc_AttributeError, +#if PY_MAJOR_VERSION >= 3 + "'%.50s' object has no attribute '%U'", + tp->tp_name, attr_name); #else - if (likely(PyCFunction_Check(func))) { + "'%.50s' object has no attribute '%.400s'", + tp->tp_name, PyString_AS_STRING(attr_name)); #endif - if (likely(PyCFunction_GET_FLAGS(func) & METH_O)) { - return __Pyx_PyObject_CallMethO(func, arg); + return NULL; +} +static CYTHON_INLINE PyObject* __Pyx_PyObject_GenericGetAttrNoDict(PyObject* obj, PyObject* attr_name) { + PyObject *descr; + PyTypeObject *tp = Py_TYPE(obj); + if (unlikely(!PyString_Check(attr_name))) { + return PyObject_GenericGetAttr(obj, attr_name); + } + assert(!tp->tp_dictoffset); + descr = _PyType_Lookup(tp, attr_name); + if (unlikely(!descr)) { + return __Pyx_RaiseGenericGetAttributeError(tp, attr_name); + } + Py_INCREF(descr); + #if PY_MAJOR_VERSION < 3 + if (likely(PyType_HasFeature(Py_TYPE(descr), Py_TPFLAGS_HAVE_CLASS))) + #endif + { + descrgetfunc f = Py_TYPE(descr)->tp_descr_get; + if (unlikely(f)) { + PyObject *res = f(descr, obj, (PyObject *)tp); + Py_DECREF(descr); + return res; } } - return __Pyx__PyObject_CallOneArg(func, arg); -} -#else -static CYTHON_INLINE PyObject* __Pyx_PyObject_CallOneArg(PyObject *func, PyObject *arg) { - PyObject* args = PyTuple_Pack(1, arg); - return (likely(args)) ? __Pyx_PyObject_Call(func, args, NULL) : NULL; + return descr; } #endif -static int __Pyx_SetVtable(PyObject *dict, void *vtable) { +/* PyObject_GenericGetAttr */ + #if CYTHON_USE_TYPE_SLOTS && CYTHON_USE_PYTYPE_LOOKUP && PY_VERSION_HEX < 0x03070000 +static PyObject* __Pyx_PyObject_GenericGetAttr(PyObject* obj, PyObject* attr_name) { + if (unlikely(Py_TYPE(obj)->tp_dictoffset)) { + return PyObject_GenericGetAttr(obj, attr_name); + } + return __Pyx_PyObject_GenericGetAttrNoDict(obj, attr_name); +} +#endif + +/* SetVTable */ + static int __Pyx_SetVtable(PyObject *dict, void *vtable) { #if PY_VERSION_HEX >= 0x02070000 PyObject *ob = PyCapsule_New(vtable, 0, 0); #else @@ -19858,7 +23151,187 @@ bad: return -1; } -static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) { +/* SetupReduce */ + static int __Pyx_setup_reduce_is_named(PyObject* meth, PyObject* name) { + int ret; + PyObject *name_attr; + name_attr = __Pyx_PyObject_GetAttrStr(meth, __pyx_n_s_name_2); + if (likely(name_attr)) { + ret = PyObject_RichCompareBool(name_attr, name, Py_EQ); + } else { + ret = -1; + } + if (unlikely(ret < 0)) { + PyErr_Clear(); + ret = 0; + } + Py_XDECREF(name_attr); + return ret; +} +static int __Pyx_setup_reduce(PyObject* type_obj) { + int ret = 0; + PyObject *object_reduce = NULL; + PyObject *object_reduce_ex = NULL; + PyObject *reduce = NULL; + PyObject *reduce_ex = NULL; + PyObject *reduce_cython = NULL; + PyObject *setstate = NULL; + PyObject *setstate_cython = NULL; +#if CYTHON_USE_PYTYPE_LOOKUP + if (_PyType_Lookup((PyTypeObject*)type_obj, __pyx_n_s_getstate)) goto GOOD; +#else + if (PyObject_HasAttr(type_obj, __pyx_n_s_getstate)) goto GOOD; +#endif +#if CYTHON_USE_PYTYPE_LOOKUP + object_reduce_ex = _PyType_Lookup(&PyBaseObject_Type, __pyx_n_s_reduce_ex); if (!object_reduce_ex) goto BAD; +#else + object_reduce_ex = __Pyx_PyObject_GetAttrStr((PyObject*)&PyBaseObject_Type, __pyx_n_s_reduce_ex); if (!object_reduce_ex) goto BAD; +#endif + reduce_ex = __Pyx_PyObject_GetAttrStr(type_obj, __pyx_n_s_reduce_ex); if (unlikely(!reduce_ex)) goto BAD; + if (reduce_ex == object_reduce_ex) { +#if CYTHON_USE_PYTYPE_LOOKUP + object_reduce = _PyType_Lookup(&PyBaseObject_Type, __pyx_n_s_reduce); if (!object_reduce) goto BAD; +#else + object_reduce = __Pyx_PyObject_GetAttrStr((PyObject*)&PyBaseObject_Type, __pyx_n_s_reduce); if (!object_reduce) goto BAD; +#endif + reduce = __Pyx_PyObject_GetAttrStr(type_obj, __pyx_n_s_reduce); if (unlikely(!reduce)) goto BAD; + if (reduce == object_reduce || __Pyx_setup_reduce_is_named(reduce, __pyx_n_s_reduce_cython)) { + reduce_cython = __Pyx_PyObject_GetAttrStr(type_obj, __pyx_n_s_reduce_cython); if (unlikely(!reduce_cython)) goto BAD; + ret = PyDict_SetItem(((PyTypeObject*)type_obj)->tp_dict, __pyx_n_s_reduce, reduce_cython); if (unlikely(ret < 0)) goto BAD; + ret = PyDict_DelItem(((PyTypeObject*)type_obj)->tp_dict, __pyx_n_s_reduce_cython); if (unlikely(ret < 0)) goto BAD; + setstate = __Pyx_PyObject_GetAttrStr(type_obj, __pyx_n_s_setstate); + if (!setstate) PyErr_Clear(); + if (!setstate || __Pyx_setup_reduce_is_named(setstate, __pyx_n_s_setstate_cython)) { + setstate_cython = __Pyx_PyObject_GetAttrStr(type_obj, __pyx_n_s_setstate_cython); if (unlikely(!setstate_cython)) goto BAD; + ret = PyDict_SetItem(((PyTypeObject*)type_obj)->tp_dict, __pyx_n_s_setstate, setstate_cython); if (unlikely(ret < 0)) goto BAD; + ret = PyDict_DelItem(((PyTypeObject*)type_obj)->tp_dict, __pyx_n_s_setstate_cython); if (unlikely(ret < 0)) goto BAD; + } + PyType_Modified((PyTypeObject*)type_obj); + } + } + goto GOOD; +BAD: + if (!PyErr_Occurred()) + PyErr_Format(PyExc_RuntimeError, "Unable to initialize pickling for %s", ((PyTypeObject*)type_obj)->tp_name); + ret = -1; +GOOD: +#if !CYTHON_USE_PYTYPE_LOOKUP + Py_XDECREF(object_reduce); + Py_XDECREF(object_reduce_ex); +#endif + Py_XDECREF(reduce); + Py_XDECREF(reduce_ex); + Py_XDECREF(reduce_cython); + Py_XDECREF(setstate); + Py_XDECREF(setstate_cython); + return ret; +} + +/* TypeImport */ + #ifndef __PYX_HAVE_RT_ImportType +#define __PYX_HAVE_RT_ImportType +static PyTypeObject *__Pyx_ImportType(PyObject *module, const char *module_name, const char *class_name, + size_t size, enum __Pyx_ImportType_CheckSize check_size) +{ + PyObject *result = 0; + char warning[200]; + Py_ssize_t basicsize; +#ifdef Py_LIMITED_API + PyObject *py_basicsize; +#endif + result = PyObject_GetAttrString(module, class_name); + if (!result) + goto bad; + if (!PyType_Check(result)) { + PyErr_Format(PyExc_TypeError, + "%.200s.%.200s is not a type object", + module_name, class_name); + goto bad; + } +#ifndef Py_LIMITED_API + basicsize = ((PyTypeObject *)result)->tp_basicsize; +#else + py_basicsize = PyObject_GetAttrString(result, "__basicsize__"); + if (!py_basicsize) + goto bad; + basicsize = PyLong_AsSsize_t(py_basicsize); + Py_DECREF(py_basicsize); + py_basicsize = 0; + if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred()) + goto bad; +#endif + if ((size_t)basicsize < size) { + PyErr_Format(PyExc_ValueError, + "%.200s.%.200s size changed, may indicate binary incompatibility. " + "Expected %zd from C header, got %zd from PyObject", + module_name, class_name, size, basicsize); + goto bad; + } + if (check_size == __Pyx_ImportType_CheckSize_Error && (size_t)basicsize != size) { + PyErr_Format(PyExc_ValueError, + "%.200s.%.200s size changed, may indicate binary incompatibility. " + "Expected %zd from C header, got %zd from PyObject", + module_name, class_name, size, basicsize); + goto bad; + } + else if (check_size == __Pyx_ImportType_CheckSize_Warn && (size_t)basicsize > size) { + PyOS_snprintf(warning, sizeof(warning), + "%s.%s size changed, may indicate binary incompatibility. " + "Expected %zd from C header, got %zd from PyObject", + module_name, class_name, size, basicsize); + if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad; + } + return (PyTypeObject *)result; +bad: + Py_XDECREF(result); + return NULL; +} +#endif + +/* CLineInTraceback */ + #ifndef CYTHON_CLINE_IN_TRACEBACK +static int __Pyx_CLineForTraceback(PyThreadState *tstate, int c_line) { + PyObject *use_cline; + PyObject *ptype, *pvalue, *ptraceback; +#if CYTHON_COMPILING_IN_CPYTHON + PyObject **cython_runtime_dict; +#endif + if (unlikely(!__pyx_cython_runtime)) { + return c_line; + } + __Pyx_ErrFetchInState(tstate, &ptype, &pvalue, &ptraceback); +#if CYTHON_COMPILING_IN_CPYTHON + cython_runtime_dict = _PyObject_GetDictPtr(__pyx_cython_runtime); + if (likely(cython_runtime_dict)) { + __PYX_PY_DICT_LOOKUP_IF_MODIFIED( + use_cline, *cython_runtime_dict, + __Pyx_PyDict_GetItemStr(*cython_runtime_dict, __pyx_n_s_cline_in_traceback)) + } else +#endif + { + PyObject *use_cline_obj = __Pyx_PyObject_GetAttrStr(__pyx_cython_runtime, __pyx_n_s_cline_in_traceback); + if (use_cline_obj) { + use_cline = PyObject_Not(use_cline_obj) ? Py_False : Py_True; + Py_DECREF(use_cline_obj); + } else { + PyErr_Clear(); + use_cline = NULL; + } + } + if (!use_cline) { + c_line = 0; + PyObject_SetAttr(__pyx_cython_runtime, __pyx_n_s_cline_in_traceback, Py_False); + } + else if (use_cline == Py_False || (use_cline != Py_True && PyObject_Not(use_cline) != 0)) { + c_line = 0; + } + __Pyx_ErrRestoreInState(tstate, ptype, pvalue, ptraceback); + return c_line; +} +#endif + +/* CodeObjectCache */ + static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) { int start = 0, mid = 0, end = count - 1; if (end >= 0 && code_line > entries[end].code_line) { return count; @@ -19937,7 +23410,8 @@ static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) { Py_INCREF(code_object); } -#include "compile.h" +/* AddTraceback */ + #include "compile.h" #include "frameobject.h" #include "traceback.h" static PyCodeObject* __Pyx_CreateCodeObjectForTraceback( @@ -19996,21 +23470,25 @@ static void __Pyx_AddTraceback(const char *funcname, int c_line, int py_line, const char *filename) { PyCodeObject *py_code = 0; PyFrameObject *py_frame = 0; - py_code = __pyx_find_code_object(c_line ? c_line : py_line); + PyThreadState *tstate = __Pyx_PyThreadState_Current; + if (c_line) { + c_line = __Pyx_CLineForTraceback(tstate, c_line); + } + py_code = __pyx_find_code_object(c_line ? -c_line : py_line); if (!py_code) { py_code = __Pyx_CreateCodeObjectForTraceback( funcname, c_line, py_line, filename); if (!py_code) goto bad; - __pyx_insert_code_object(c_line ? c_line : py_line, py_code); + __pyx_insert_code_object(c_line ? -c_line : py_line, py_code); } py_frame = PyFrame_New( - PyThreadState_GET(), /*PyThreadState *tstate,*/ - py_code, /*PyCodeObject *code,*/ - __pyx_d, /*PyObject *globals,*/ - 0 /*PyObject *locals*/ + tstate, /*PyThreadState *tstate,*/ + py_code, /*PyCodeObject *code,*/ + __pyx_d, /*PyObject *globals,*/ + 0 /*PyObject *locals*/ ); if (!py_frame) goto bad; - py_frame->f_lineno = py_line; + __Pyx_PyFrame_SetLineNumber(py_frame, py_line); PyTraceBack_Here(py_frame); bad: Py_XDECREF(py_code); @@ -20020,9 +23498,9 @@ bad: #if PY_MAJOR_VERSION < 3 static int __Pyx_GetBuffer(PyObject *obj, Py_buffer *view, int flags) { if (PyObject_CheckBuffer(obj)) return PyObject_GetBuffer(obj, view, flags); - if (PyObject_TypeCheck(obj, __pyx_ptype_5numpy_ndarray)) return __pyx_pw_5numpy_7ndarray_1__getbuffer__(obj, view, flags); - if (PyObject_TypeCheck(obj, __pyx_array_type)) return __pyx_array_getbuffer(obj, view, flags); - if (PyObject_TypeCheck(obj, __pyx_memoryview_type)) return __pyx_memoryview_getbuffer(obj, view, flags); + if (__Pyx_TypeCheck(obj, __pyx_ptype_5numpy_ndarray)) return __pyx_pw_5numpy_7ndarray_1__getbuffer__(obj, view, flags); + if (__Pyx_TypeCheck(obj, __pyx_array_type)) return __pyx_array_getbuffer(obj, view, flags); + if (__Pyx_TypeCheck(obj, __pyx_memoryview_type)) return __pyx_memoryview_getbuffer(obj, view, flags); PyErr_Format(PyExc_TypeError, "'%.200s' does not have the buffer interface", Py_TYPE(obj)->tp_name); return -1; } @@ -20033,14 +23511,87 @@ static void __Pyx_ReleaseBuffer(Py_buffer *view) { PyBuffer_Release(view); return; } - if (PyObject_TypeCheck(obj, __pyx_ptype_5numpy_ndarray)) { __pyx_pw_5numpy_7ndarray_3__releasebuffer__(obj, view); return; } - Py_DECREF(obj); + if ((0)) {} + else if (__Pyx_TypeCheck(obj, __pyx_ptype_5numpy_ndarray)) __pyx_pw_5numpy_7ndarray_3__releasebuffer__(obj, view); view->obj = NULL; + Py_DECREF(obj); } #endif - #define __PYX_VERIFY_RETURN_INT(target_type, func_type, func_value)\ + /* MemviewSliceIsContig */ + static int +__pyx_memviewslice_is_contig(const __Pyx_memviewslice mvs, char order, int ndim) +{ + int i, index, step, start; + Py_ssize_t itemsize = mvs.memview->view.itemsize; + if (order == 'F') { + step = 1; + start = 0; + } else { + step = -1; + start = ndim - 1; + } + for (i = 0; i < ndim; i++) { + index = start + step * i; + if (mvs.suboffsets[index] >= 0 || mvs.strides[index] != itemsize) + return 0; + itemsize *= mvs.shape[index]; + } + return 1; +} + +/* OverlappingSlices */ + static void +__pyx_get_array_memory_extents(__Pyx_memviewslice *slice, + void **out_start, void **out_end, + int ndim, size_t itemsize) +{ + char *start, *end; + int i; + start = end = slice->data; + for (i = 0; i < ndim; i++) { + Py_ssize_t stride = slice->strides[i]; + Py_ssize_t extent = slice->shape[i]; + if (extent == 0) { + *out_start = *out_end = start; + return; + } else { + if (stride > 0) + end += stride * (extent - 1); + else + start += stride * (extent - 1); + } + } + *out_start = start; + *out_end = end + itemsize; +} +static int +__pyx_slices_overlap(__Pyx_memviewslice *slice1, + __Pyx_memviewslice *slice2, + int ndim, size_t itemsize) +{ + void *start1, *end1, *start2, *end2; + __pyx_get_array_memory_extents(slice1, &start1, &end1, ndim, itemsize); + __pyx_get_array_memory_extents(slice2, &start2, &end2, ndim, itemsize); + return (start1 < end2) && (start2 < end1); +} + +/* Capsule */ + static CYTHON_INLINE PyObject * +__pyx_capsule_create(void *p, CYTHON_UNUSED const char *sig) +{ + PyObject *cobj; +#if PY_VERSION_HEX >= 0x02070000 + cobj = PyCapsule_New(p, sig, NULL); +#else + cobj = PyCObject_FromVoidPtr(p, NULL); +#endif + return cobj; +} + +/* CIntFromPyVerify */ + #define __PYX_VERIFY_RETURN_INT(target_type, func_type, func_value)\ __PYX__VERIFY_RETURN_INT(target_type, func_type, func_value, 0) #define __PYX_VERIFY_RETURN_INT_EXC(target_type, func_type, func_value)\ __PYX__VERIFY_RETURN_INT(target_type, func_type, func_value, 1) @@ -20061,191 +23612,8 @@ static void __Pyx_ReleaseBuffer(Py_buffer *view) { return (target_type) value;\ } -static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { - const int neg_one = (int) -1, const_zero = (int) 0; - const int is_unsigned = neg_one > const_zero; -#if PY_MAJOR_VERSION < 3 - if (likely(PyInt_Check(x))) { - if (sizeof(int) < sizeof(long)) { - __PYX_VERIFY_RETURN_INT(int, long, PyInt_AS_LONG(x)) - } else { - long val = PyInt_AS_LONG(x); - if (is_unsigned && unlikely(val < 0)) { - goto raise_neg_overflow; - } - return (int) val; - } - } else -#endif - if (likely(PyLong_Check(x))) { - if (is_unsigned) { -#if CYTHON_USE_PYLONG_INTERNALS - const digit* digits = ((PyLongObject*)x)->ob_digit; - switch (Py_SIZE(x)) { - case 0: return (int) 0; - case 1: __PYX_VERIFY_RETURN_INT(int, digit, digits[0]) - case 2: - if (8 * sizeof(int) > 1 * PyLong_SHIFT) { - if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) - } else if (8 * sizeof(int) >= 2 * PyLong_SHIFT) { - return (int) (((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0])); - } - } - break; - case 3: - if (8 * sizeof(int) > 2 * PyLong_SHIFT) { - if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) - } else if (8 * sizeof(int) >= 3 * PyLong_SHIFT) { - return (int) (((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0])); - } - } - break; - case 4: - if (8 * sizeof(int) > 3 * PyLong_SHIFT) { - if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) - } else if (8 * sizeof(int) >= 4 * PyLong_SHIFT) { - return (int) (((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0])); - } - } - break; - } -#endif -#if CYTHON_COMPILING_IN_CPYTHON - if (unlikely(Py_SIZE(x) < 0)) { - goto raise_neg_overflow; - } -#else - { - int result = PyObject_RichCompareBool(x, Py_False, Py_LT); - if (unlikely(result < 0)) - return (int) -1; - if (unlikely(result == 1)) - goto raise_neg_overflow; - } -#endif - if (sizeof(int) <= sizeof(unsigned long)) { - __PYX_VERIFY_RETURN_INT_EXC(int, unsigned long, PyLong_AsUnsignedLong(x)) - } else if (sizeof(int) <= sizeof(unsigned PY_LONG_LONG)) { - __PYX_VERIFY_RETURN_INT_EXC(int, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) - } - } else { -#if CYTHON_USE_PYLONG_INTERNALS - const digit* digits = ((PyLongObject*)x)->ob_digit; - switch (Py_SIZE(x)) { - case 0: return (int) 0; - case -1: __PYX_VERIFY_RETURN_INT(int, sdigit, -(sdigit) digits[0]) - case 1: __PYX_VERIFY_RETURN_INT(int, digit, +digits[0]) - case -2: - if (8 * sizeof(int) - 1 > 1 * PyLong_SHIFT) { - if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) - } else if (8 * sizeof(int) - 1 > 2 * PyLong_SHIFT) { - return (int) (((int)-1)*(((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); - } - } - break; - case 2: - if (8 * sizeof(int) > 1 * PyLong_SHIFT) { - if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) - } else if (8 * sizeof(int) - 1 > 2 * PyLong_SHIFT) { - return (int) ((((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); - } - } - break; - case -3: - if (8 * sizeof(int) - 1 > 2 * PyLong_SHIFT) { - if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) - } else if (8 * sizeof(int) - 1 > 3 * PyLong_SHIFT) { - return (int) (((int)-1)*(((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); - } - } - break; - case 3: - if (8 * sizeof(int) > 2 * PyLong_SHIFT) { - if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) - } else if (8 * sizeof(int) - 1 > 3 * PyLong_SHIFT) { - return (int) ((((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); - } - } - break; - case -4: - if (8 * sizeof(int) - 1 > 3 * PyLong_SHIFT) { - if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) - } else if (8 * sizeof(int) - 1 > 4 * PyLong_SHIFT) { - return (int) (((int)-1)*(((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); - } - } - break; - case 4: - if (8 * sizeof(int) > 3 * PyLong_SHIFT) { - if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) - } else if (8 * sizeof(int) - 1 > 4 * PyLong_SHIFT) { - return (int) ((((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); - } - } - break; - } -#endif - if (sizeof(int) <= sizeof(long)) { - __PYX_VERIFY_RETURN_INT_EXC(int, long, PyLong_AsLong(x)) - } else if (sizeof(int) <= sizeof(PY_LONG_LONG)) { - __PYX_VERIFY_RETURN_INT_EXC(int, PY_LONG_LONG, PyLong_AsLongLong(x)) - } - } - { -#if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) - PyErr_SetString(PyExc_RuntimeError, - "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); -#else - int val; - PyObject *v = __Pyx_PyNumber_Int(x); - #if PY_MAJOR_VERSION < 3 - if (likely(v) && !PyLong_Check(v)) { - PyObject *tmp = v; - v = PyNumber_Long(tmp); - Py_DECREF(tmp); - } - #endif - if (likely(v)) { - int one = 1; int is_little = (int)*(unsigned char *)&one; - unsigned char *bytes = (unsigned char *)&val; - int ret = _PyLong_AsByteArray((PyLongObject *)v, - bytes, sizeof(val), - is_little, !is_unsigned); - Py_DECREF(v); - if (likely(!ret)) - return val; - } -#endif - return (int) -1; - } - } else { - int val; - PyObject *tmp = __Pyx_PyNumber_Int(x); - if (!tmp) return (int) -1; - val = __Pyx_PyInt_As_int(tmp); - Py_DECREF(tmp); - return val; - } -raise_overflow: - PyErr_SetString(PyExc_OverflowError, - "value too large to convert to int"); - return (int) -1; -raise_neg_overflow: - PyErr_SetString(PyExc_OverflowError, - "can't convert negative value to int"); - return (int) -1; -} - -static int +/* TypeInfoCompare */ + static int __pyx_typeinfo_cmp(__Pyx_TypeInfo *a, __Pyx_TypeInfo *b) { int i; @@ -20285,7 +23653,8 @@ __pyx_typeinfo_cmp(__Pyx_TypeInfo *a, __Pyx_TypeInfo *b) return 1; } -static int +/* MemviewSliceValidateAndInit */ + static int __pyx_check_strides(Py_buffer *buf, int dim, int ndim, int spec) { if (buf->shape[dim] <= 1) @@ -20466,7 +23835,8 @@ no_fail: return retval; } -static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_dsds_double(PyObject *obj) { +/* ObjectToMemviewSlice */ + static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_dsds_double(PyObject *obj, int writable_flag) { __Pyx_memviewslice result = { 0, 0, { 0 }, { 0 }, { 0 } }; __Pyx_BufFmt_StackElem stack[1]; int axes_specs[] = { (__Pyx_MEMVIEW_DIRECT | __Pyx_MEMVIEW_STRIDED), (__Pyx_MEMVIEW_DIRECT | __Pyx_MEMVIEW_STRIDED) }; @@ -20476,7 +23846,7 @@ static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_dsds_d return result; } retcode = __Pyx_ValidateAndInit_memviewslice(axes_specs, 0, - PyBUF_RECORDS, 2, + PyBUF_RECORDS_RO | writable_flag, 2, &__Pyx_TypeInfo_double, stack, &result, obj); if (unlikely(retcode == -1)) @@ -20488,7 +23858,8 @@ __pyx_fail: return result; } -static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_ds_double(PyObject *obj) { +/* ObjectToMemviewSlice */ + static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_ds_double(PyObject *obj, int writable_flag) { __Pyx_memviewslice result = { 0, 0, { 0 }, { 0 }, { 0 } }; __Pyx_BufFmt_StackElem stack[1]; int axes_specs[] = { (__Pyx_MEMVIEW_DIRECT | __Pyx_MEMVIEW_STRIDED) }; @@ -20498,7 +23869,7 @@ static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_ds_dou return result; } retcode = __Pyx_ValidateAndInit_memviewslice(axes_specs, 0, - PyBUF_RECORDS, 1, + PyBUF_RECORDS_RO | writable_flag, 1, &__Pyx_TypeInfo_double, stack, &result, obj); if (unlikely(retcode == -1)) @@ -20510,22 +23881,27 @@ __pyx_fail: return result; } -static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value) { - const int neg_one = (int) -1, const_zero = (int) 0; +/* CIntToPy */ + static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value) { + const int neg_one = (int) ((int) 0 - (int) 1), const_zero = (int) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(int) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(int) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); +#ifdef HAVE_LONG_LONG } else if (sizeof(int) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); +#endif } } else { if (sizeof(int) <= sizeof(long)) { return PyInt_FromLong((long) value); +#ifdef HAVE_LONG_LONG } else if (sizeof(int) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); +#endif } } { @@ -20536,7 +23912,8 @@ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value) { } } -#if CYTHON_CCOMPLEX +/* Declarations */ + #if CYTHON_CCOMPLEX #ifdef __cplusplus static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) { return ::std::complex< float >(x, y); @@ -20555,60 +23932,86 @@ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value) { } #endif -#if CYTHON_CCOMPLEX +/* Arithmetic */ + #if CYTHON_CCOMPLEX #else - static CYTHON_INLINE int __Pyx_c_eqf(__pyx_t_float_complex a, __pyx_t_float_complex b) { + static CYTHON_INLINE int __Pyx_c_eq_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { return (a.real == b.real) && (a.imag == b.imag); } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sumf(__pyx_t_float_complex a, __pyx_t_float_complex b) { + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sum_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { __pyx_t_float_complex z; z.real = a.real + b.real; z.imag = a.imag + b.imag; return z; } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_difff(__pyx_t_float_complex a, __pyx_t_float_complex b) { + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_diff_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { __pyx_t_float_complex z; z.real = a.real - b.real; z.imag = a.imag - b.imag; return z; } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_prodf(__pyx_t_float_complex a, __pyx_t_float_complex b) { + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_prod_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { __pyx_t_float_complex z; z.real = a.real * b.real - a.imag * b.imag; z.imag = a.real * b.imag + a.imag * b.real; return z; } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quotf(__pyx_t_float_complex a, __pyx_t_float_complex b) { - __pyx_t_float_complex z; - float denom = b.real * b.real + b.imag * b.imag; - z.real = (a.real * b.real + a.imag * b.imag) / denom; - z.imag = (a.imag * b.real - a.real * b.imag) / denom; - return z; + #if 1 + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quot_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { + if (b.imag == 0) { + return __pyx_t_float_complex_from_parts(a.real / b.real, a.imag / b.real); + } else if (fabsf(b.real) >= fabsf(b.imag)) { + if (b.real == 0 && b.imag == 0) { + return __pyx_t_float_complex_from_parts(a.real / b.real, a.imag / b.imag); + } else { + float r = b.imag / b.real; + float s = 1.0 / (b.real + b.imag * r); + return __pyx_t_float_complex_from_parts( + (a.real + a.imag * r) * s, (a.imag - a.real * r) * s); + } + } else { + float r = b.real / b.imag; + float s = 1.0 / (b.imag + b.real * r); + return __pyx_t_float_complex_from_parts( + (a.real * r + a.imag) * s, (a.imag * r - a.real) * s); + } } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_negf(__pyx_t_float_complex a) { + #else + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quot_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { + if (b.imag == 0) { + return __pyx_t_float_complex_from_parts(a.real / b.real, a.imag / b.real); + } else { + float denom = b.real * b.real + b.imag * b.imag; + return __pyx_t_float_complex_from_parts( + (a.real * b.real + a.imag * b.imag) / denom, + (a.imag * b.real - a.real * b.imag) / denom); + } + } + #endif + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_neg_float(__pyx_t_float_complex a) { __pyx_t_float_complex z; z.real = -a.real; z.imag = -a.imag; return z; } - static CYTHON_INLINE int __Pyx_c_is_zerof(__pyx_t_float_complex a) { + static CYTHON_INLINE int __Pyx_c_is_zero_float(__pyx_t_float_complex a) { return (a.real == 0) && (a.imag == 0); } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conjf(__pyx_t_float_complex a) { + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conj_float(__pyx_t_float_complex a) { __pyx_t_float_complex z; z.real = a.real; z.imag = -a.imag; return z; } #if 1 - static CYTHON_INLINE float __Pyx_c_absf(__pyx_t_float_complex z) { + static CYTHON_INLINE float __Pyx_c_abs_float(__pyx_t_float_complex z) { #if !defined(HAVE_HYPOT) || defined(_MSC_VER) return sqrtf(z.real*z.real + z.imag*z.imag); #else return hypotf(z.real, z.imag); #endif } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_powf(__pyx_t_float_complex a, __pyx_t_float_complex b) { + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_pow_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { __pyx_t_float_complex z; float r, lnr, theta, z_r, z_theta; if (b.imag == 0 && b.real == (int)b.real) { @@ -20626,24 +24029,32 @@ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value) { case 1: return a; case 2: - z = __Pyx_c_prodf(a, a); - return __Pyx_c_prodf(a, a); + z = __Pyx_c_prod_float(a, a); + return __Pyx_c_prod_float(a, a); case 3: - z = __Pyx_c_prodf(a, a); - return __Pyx_c_prodf(z, a); + z = __Pyx_c_prod_float(a, a); + return __Pyx_c_prod_float(z, a); case 4: - z = __Pyx_c_prodf(a, a); - return __Pyx_c_prodf(z, z); + z = __Pyx_c_prod_float(a, a); + return __Pyx_c_prod_float(z, z); } } if (a.imag == 0) { if (a.real == 0) { return a; + } else if (b.imag == 0) { + z.real = powf(a.real, b.real); + z.imag = 0; + return z; + } else if (a.real > 0) { + r = a.real; + theta = 0; + } else { + r = -a.real; + theta = atan2f(0, -1); } - r = a.real; - theta = 0; } else { - r = __Pyx_c_absf(a); + r = __Pyx_c_abs_float(a); theta = atan2f(a.imag, a.real); } lnr = logf(r); @@ -20656,7 +24067,8 @@ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value) { #endif #endif -#if CYTHON_CCOMPLEX +/* Declarations */ + #if CYTHON_CCOMPLEX #ifdef __cplusplus static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) { return ::std::complex< double >(x, y); @@ -20675,60 +24087,86 @@ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value) { } #endif -#if CYTHON_CCOMPLEX +/* Arithmetic */ + #if CYTHON_CCOMPLEX #else - static CYTHON_INLINE int __Pyx_c_eq(__pyx_t_double_complex a, __pyx_t_double_complex b) { + static CYTHON_INLINE int __Pyx_c_eq_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { return (a.real == b.real) && (a.imag == b.imag); } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum(__pyx_t_double_complex a, __pyx_t_double_complex b) { + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { __pyx_t_double_complex z; z.real = a.real + b.real; z.imag = a.imag + b.imag; return z; } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff(__pyx_t_double_complex a, __pyx_t_double_complex b) { + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { __pyx_t_double_complex z; z.real = a.real - b.real; z.imag = a.imag - b.imag; return z; } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_prod(__pyx_t_double_complex a, __pyx_t_double_complex b) { + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_prod_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { __pyx_t_double_complex z; z.real = a.real * b.real - a.imag * b.imag; z.imag = a.real * b.imag + a.imag * b.real; return z; } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot(__pyx_t_double_complex a, __pyx_t_double_complex b) { - __pyx_t_double_complex z; - double denom = b.real * b.real + b.imag * b.imag; - z.real = (a.real * b.real + a.imag * b.imag) / denom; - z.imag = (a.imag * b.real - a.real * b.imag) / denom; - return z; + #if 1 + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { + if (b.imag == 0) { + return __pyx_t_double_complex_from_parts(a.real / b.real, a.imag / b.real); + } else if (fabs(b.real) >= fabs(b.imag)) { + if (b.real == 0 && b.imag == 0) { + return __pyx_t_double_complex_from_parts(a.real / b.real, a.imag / b.imag); + } else { + double r = b.imag / b.real; + double s = 1.0 / (b.real + b.imag * r); + return __pyx_t_double_complex_from_parts( + (a.real + a.imag * r) * s, (a.imag - a.real * r) * s); + } + } else { + double r = b.real / b.imag; + double s = 1.0 / (b.imag + b.real * r); + return __pyx_t_double_complex_from_parts( + (a.real * r + a.imag) * s, (a.imag * r - a.real) * s); + } } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg(__pyx_t_double_complex a) { + #else + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { + if (b.imag == 0) { + return __pyx_t_double_complex_from_parts(a.real / b.real, a.imag / b.real); + } else { + double denom = b.real * b.real + b.imag * b.imag; + return __pyx_t_double_complex_from_parts( + (a.real * b.real + a.imag * b.imag) / denom, + (a.imag * b.real - a.real * b.imag) / denom); + } + } + #endif + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg_double(__pyx_t_double_complex a) { __pyx_t_double_complex z; z.real = -a.real; z.imag = -a.imag; return z; } - static CYTHON_INLINE int __Pyx_c_is_zero(__pyx_t_double_complex a) { + static CYTHON_INLINE int __Pyx_c_is_zero_double(__pyx_t_double_complex a) { return (a.real == 0) && (a.imag == 0); } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj(__pyx_t_double_complex a) { + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj_double(__pyx_t_double_complex a) { __pyx_t_double_complex z; z.real = a.real; z.imag = -a.imag; return z; } #if 1 - static CYTHON_INLINE double __Pyx_c_abs(__pyx_t_double_complex z) { + static CYTHON_INLINE double __Pyx_c_abs_double(__pyx_t_double_complex z) { #if !defined(HAVE_HYPOT) || defined(_MSC_VER) return sqrt(z.real*z.real + z.imag*z.imag); #else return hypot(z.real, z.imag); #endif } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow(__pyx_t_double_complex a, __pyx_t_double_complex b) { + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { __pyx_t_double_complex z; double r, lnr, theta, z_r, z_theta; if (b.imag == 0 && b.real == (int)b.real) { @@ -20746,24 +24184,32 @@ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value) { case 1: return a; case 2: - z = __Pyx_c_prod(a, a); - return __Pyx_c_prod(a, a); + z = __Pyx_c_prod_double(a, a); + return __Pyx_c_prod_double(a, a); case 3: - z = __Pyx_c_prod(a, a); - return __Pyx_c_prod(z, a); + z = __Pyx_c_prod_double(a, a); + return __Pyx_c_prod_double(z, a); case 4: - z = __Pyx_c_prod(a, a); - return __Pyx_c_prod(z, z); + z = __Pyx_c_prod_double(a, a); + return __Pyx_c_prod_double(z, z); } } if (a.imag == 0) { if (a.real == 0) { return a; + } else if (b.imag == 0) { + z.real = pow(a.real, b.real); + z.imag = 0; + return z; + } else if (a.real > 0) { + r = a.real; + theta = 0; + } else { + r = -a.real; + theta = atan2(0, -1); } - r = a.real; - theta = 0; } else { - r = __Pyx_c_abs(a); + r = __Pyx_c_abs_double(a); theta = atan2(a.imag, a.real); } lnr = log(r); @@ -20776,22 +24222,27 @@ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value) { #endif #endif -static CYTHON_INLINE PyObject* __Pyx_PyInt_From_enum__NPY_TYPES(enum NPY_TYPES value) { - const enum NPY_TYPES neg_one = (enum NPY_TYPES) -1, const_zero = (enum NPY_TYPES) 0; +/* CIntToPy */ + static CYTHON_INLINE PyObject* __Pyx_PyInt_From_enum__NPY_TYPES(enum NPY_TYPES value) { + const enum NPY_TYPES neg_one = (enum NPY_TYPES) ((enum NPY_TYPES) 0 - (enum NPY_TYPES) 1), const_zero = (enum NPY_TYPES) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(enum NPY_TYPES) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(enum NPY_TYPES) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); +#ifdef HAVE_LONG_LONG } else if (sizeof(enum NPY_TYPES) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); +#endif } } else { if (sizeof(enum NPY_TYPES) <= sizeof(long)) { return PyInt_FromLong((long) value); +#ifdef HAVE_LONG_LONG } else if (sizeof(enum NPY_TYPES) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); +#endif } } { @@ -20802,64 +24253,8 @@ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_enum__NPY_TYPES(enum NPY_TYPES v } } -static int -__pyx_memviewslice_is_contig(const __Pyx_memviewslice *mvs, - char order, int ndim) -{ - int i, index, step, start; - Py_ssize_t itemsize = mvs->memview->view.itemsize; - if (order == 'F') { - step = 1; - start = 0; - } else { - step = -1; - start = ndim - 1; - } - for (i = 0; i < ndim; i++) { - index = start + step * i; - if (mvs->suboffsets[index] >= 0 || mvs->strides[index] != itemsize) - return 0; - itemsize *= mvs->shape[index]; - } - return 1; -} - -static void -__pyx_get_array_memory_extents(__Pyx_memviewslice *slice, - void **out_start, void **out_end, - int ndim, size_t itemsize) -{ - char *start, *end; - int i; - start = end = slice->data; - for (i = 0; i < ndim; i++) { - Py_ssize_t stride = slice->strides[i]; - Py_ssize_t extent = slice->shape[i]; - if (extent == 0) { - *out_start = *out_end = start; - return; - } else { - if (stride > 0) - end += stride * (extent - 1); - else - start += stride * (extent - 1); - } - } - *out_start = start; - *out_end = end + itemsize; -} -static int -__pyx_slices_overlap(__Pyx_memviewslice *slice1, - __Pyx_memviewslice *slice2, - int ndim, size_t itemsize) -{ - void *start1, *end1, *start2, *end2; - __pyx_get_array_memory_extents(slice1, &start1, &end1, ndim, itemsize); - __pyx_get_array_memory_extents(slice2, &start2, &end2, ndim, itemsize); - return (start1 < end2) && (start2 < end1); -} - -static __Pyx_memviewslice +/* MemviewSliceCopyTemplate */ + static __Pyx_memviewslice __pyx_memoryview_copy_new_contig(const __Pyx_memviewslice *from_mvs, const char *mode, int ndim, size_t sizeof_dtype, int contig_flag, @@ -20925,57 +24320,20 @@ no_fail: return new_mvs; } -static CYTHON_INLINE PyObject * -__pyx_capsule_create(void *p, CYTHON_UNUSED const char *sig) -{ - PyObject *cobj; -#if PY_VERSION_HEX >= 0x02070000 - cobj = PyCapsule_New(p, sig, NULL); -#else - cobj = PyCObject_FromVoidPtr(p, NULL); -#endif - return cobj; -} - -static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) { - const long neg_one = (long) -1, const_zero = (long) 0; - const int is_unsigned = neg_one > const_zero; - if (is_unsigned) { - if (sizeof(long) < sizeof(long)) { - return PyInt_FromLong((long) value); - } else if (sizeof(long) <= sizeof(unsigned long)) { - return PyLong_FromUnsignedLong((unsigned long) value); - } else if (sizeof(long) <= sizeof(unsigned PY_LONG_LONG)) { - return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); - } - } else { - if (sizeof(long) <= sizeof(long)) { - return PyInt_FromLong((long) value); - } else if (sizeof(long) <= sizeof(PY_LONG_LONG)) { - return PyLong_FromLongLong((PY_LONG_LONG) value); - } - } - { - int one = 1; int little = (int)*(unsigned char *)&one; - unsigned char *bytes = (unsigned char *)&value; - return _PyLong_FromByteArray(bytes, sizeof(long), - little, !is_unsigned); - } -} - -static CYTHON_INLINE char __Pyx_PyInt_As_char(PyObject *x) { - const char neg_one = (char) -1, const_zero = (char) 0; +/* CIntFromPy */ + static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { + const int neg_one = (int) ((int) 0 - (int) 1), const_zero = (int) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { - if (sizeof(char) < sizeof(long)) { - __PYX_VERIFY_RETURN_INT(char, long, PyInt_AS_LONG(x)) + if (sizeof(int) < sizeof(long)) { + __PYX_VERIFY_RETURN_INT(int, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } - return (char) val; + return (int) val; } } else #endif @@ -20984,32 +24342,32 @@ static CYTHON_INLINE char __Pyx_PyInt_As_char(PyObject *x) { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { - case 0: return (char) 0; - case 1: __PYX_VERIFY_RETURN_INT(char, digit, digits[0]) + case 0: return (int) 0; + case 1: __PYX_VERIFY_RETURN_INT(int, digit, digits[0]) case 2: - if (8 * sizeof(char) > 1 * PyLong_SHIFT) { + if (8 * sizeof(int) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(char, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) - } else if (8 * sizeof(char) >= 2 * PyLong_SHIFT) { - return (char) (((((char)digits[1]) << PyLong_SHIFT) | (char)digits[0])); + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) >= 2 * PyLong_SHIFT) { + return (int) (((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0])); } } break; case 3: - if (8 * sizeof(char) > 2 * PyLong_SHIFT) { + if (8 * sizeof(int) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(char, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) - } else if (8 * sizeof(char) >= 3 * PyLong_SHIFT) { - return (char) (((((((char)digits[2]) << PyLong_SHIFT) | (char)digits[1]) << PyLong_SHIFT) | (char)digits[0])); + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) >= 3 * PyLong_SHIFT) { + return (int) (((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0])); } } break; case 4: - if (8 * sizeof(char) > 3 * PyLong_SHIFT) { + if (8 * sizeof(int) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(char, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) - } else if (8 * sizeof(char) >= 4 * PyLong_SHIFT) { - return (char) (((((((((char)digits[3]) << PyLong_SHIFT) | (char)digits[2]) << PyLong_SHIFT) | (char)digits[1]) << PyLong_SHIFT) | (char)digits[0])); + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) >= 4 * PyLong_SHIFT) { + return (int) (((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0])); } } break; @@ -21023,83 +24381,87 @@ static CYTHON_INLINE char __Pyx_PyInt_As_char(PyObject *x) { { int result = PyObject_RichCompareBool(x, Py_False, Py_LT); if (unlikely(result < 0)) - return (char) -1; + return (int) -1; if (unlikely(result == 1)) goto raise_neg_overflow; } #endif - if (sizeof(char) <= sizeof(unsigned long)) { - __PYX_VERIFY_RETURN_INT_EXC(char, unsigned long, PyLong_AsUnsignedLong(x)) - } else if (sizeof(char) <= sizeof(unsigned PY_LONG_LONG)) { - __PYX_VERIFY_RETURN_INT_EXC(char, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) + if (sizeof(int) <= sizeof(unsigned long)) { + __PYX_VERIFY_RETURN_INT_EXC(int, unsigned long, PyLong_AsUnsignedLong(x)) +#ifdef HAVE_LONG_LONG + } else if (sizeof(int) <= sizeof(unsigned PY_LONG_LONG)) { + __PYX_VERIFY_RETURN_INT_EXC(int, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) +#endif } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { - case 0: return (char) 0; - case -1: __PYX_VERIFY_RETURN_INT(char, sdigit, -(sdigit) digits[0]) - case 1: __PYX_VERIFY_RETURN_INT(char, digit, +digits[0]) + case 0: return (int) 0; + case -1: __PYX_VERIFY_RETURN_INT(int, sdigit, (sdigit) (-(sdigit)digits[0])) + case 1: __PYX_VERIFY_RETURN_INT(int, digit, +digits[0]) case -2: - if (8 * sizeof(char) - 1 > 1 * PyLong_SHIFT) { + if (8 * sizeof(int) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(char, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) - } else if (8 * sizeof(char) - 1 > 2 * PyLong_SHIFT) { - return (char) (((char)-1)*(((((char)digits[1]) << PyLong_SHIFT) | (char)digits[0]))); + __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) - 1 > 2 * PyLong_SHIFT) { + return (int) (((int)-1)*(((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; case 2: - if (8 * sizeof(char) > 1 * PyLong_SHIFT) { + if (8 * sizeof(int) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(char, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) - } else if (8 * sizeof(char) - 1 > 2 * PyLong_SHIFT) { - return (char) ((((((char)digits[1]) << PyLong_SHIFT) | (char)digits[0]))); + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) - 1 > 2 * PyLong_SHIFT) { + return (int) ((((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; case -3: - if (8 * sizeof(char) - 1 > 2 * PyLong_SHIFT) { + if (8 * sizeof(int) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(char, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) - } else if (8 * sizeof(char) - 1 > 3 * PyLong_SHIFT) { - return (char) (((char)-1)*(((((((char)digits[2]) << PyLong_SHIFT) | (char)digits[1]) << PyLong_SHIFT) | (char)digits[0]))); + __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) - 1 > 3 * PyLong_SHIFT) { + return (int) (((int)-1)*(((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; case 3: - if (8 * sizeof(char) > 2 * PyLong_SHIFT) { + if (8 * sizeof(int) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(char, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) - } else if (8 * sizeof(char) - 1 > 3 * PyLong_SHIFT) { - return (char) ((((((((char)digits[2]) << PyLong_SHIFT) | (char)digits[1]) << PyLong_SHIFT) | (char)digits[0]))); + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) - 1 > 3 * PyLong_SHIFT) { + return (int) ((((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; case -4: - if (8 * sizeof(char) - 1 > 3 * PyLong_SHIFT) { + if (8 * sizeof(int) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(char, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) - } else if (8 * sizeof(char) - 1 > 4 * PyLong_SHIFT) { - return (char) (((char)-1)*(((((((((char)digits[3]) << PyLong_SHIFT) | (char)digits[2]) << PyLong_SHIFT) | (char)digits[1]) << PyLong_SHIFT) | (char)digits[0]))); + __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) - 1 > 4 * PyLong_SHIFT) { + return (int) (((int)-1)*(((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; case 4: - if (8 * sizeof(char) > 3 * PyLong_SHIFT) { + if (8 * sizeof(int) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(char, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) - } else if (8 * sizeof(char) - 1 > 4 * PyLong_SHIFT) { - return (char) ((((((((((char)digits[3]) << PyLong_SHIFT) | (char)digits[2]) << PyLong_SHIFT) | (char)digits[1]) << PyLong_SHIFT) | (char)digits[0]))); + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) - 1 > 4 * PyLong_SHIFT) { + return (int) ((((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; } #endif - if (sizeof(char) <= sizeof(long)) { - __PYX_VERIFY_RETURN_INT_EXC(char, long, PyLong_AsLong(x)) - } else if (sizeof(char) <= sizeof(PY_LONG_LONG)) { - __PYX_VERIFY_RETURN_INT_EXC(char, PY_LONG_LONG, PyLong_AsLongLong(x)) + if (sizeof(int) <= sizeof(long)) { + __PYX_VERIFY_RETURN_INT_EXC(int, long, PyLong_AsLong(x)) +#ifdef HAVE_LONG_LONG + } else if (sizeof(int) <= sizeof(PY_LONG_LONG)) { + __PYX_VERIFY_RETURN_INT_EXC(int, PY_LONG_LONG, PyLong_AsLongLong(x)) +#endif } } { @@ -21107,8 +24469,8 @@ static CYTHON_INLINE char __Pyx_PyInt_As_char(PyObject *x) { PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else - char val; - PyObject *v = __Pyx_PyNumber_Int(x); + int val; + PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; @@ -21127,28 +24489,29 @@ static CYTHON_INLINE char __Pyx_PyInt_As_char(PyObject *x) { return val; } #endif - return (char) -1; + return (int) -1; } } else { - char val; - PyObject *tmp = __Pyx_PyNumber_Int(x); - if (!tmp) return (char) -1; - val = __Pyx_PyInt_As_char(tmp); + int val; + PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); + if (!tmp) return (int) -1; + val = __Pyx_PyInt_As_int(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, - "value too large to convert to char"); - return (char) -1; + "value too large to convert to int"); + return (int) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, - "can't convert negative value to char"); - return (char) -1; + "can't convert negative value to int"); + return (int) -1; } -static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { - const long neg_one = (long) -1, const_zero = (long) 0; +/* CIntFromPy */ + static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { + const long neg_one = (long) ((long) 0 - (long) 1), const_zero = (long) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { @@ -21214,15 +24577,17 @@ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { #endif if (sizeof(long) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(long, unsigned long, PyLong_AsUnsignedLong(x)) +#ifdef HAVE_LONG_LONG } else if (sizeof(long) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(long, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) +#endif } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (long) 0; - case -1: __PYX_VERIFY_RETURN_INT(long, sdigit, -(sdigit) digits[0]) + case -1: __PYX_VERIFY_RETURN_INT(long, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(long, digit, +digits[0]) case -2: if (8 * sizeof(long) - 1 > 1 * PyLong_SHIFT) { @@ -21282,8 +24647,10 @@ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { #endif if (sizeof(long) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(long, long, PyLong_AsLong(x)) +#ifdef HAVE_LONG_LONG } else if (sizeof(long) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(long, PY_LONG_LONG, PyLong_AsLongLong(x)) +#endif } } { @@ -21292,7 +24659,7 @@ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else long val; - PyObject *v = __Pyx_PyNumber_Int(x); + PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; @@ -21315,7 +24682,7 @@ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { } } else { long val; - PyObject *tmp = __Pyx_PyNumber_Int(x); + PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (long) -1; val = __Pyx_PyInt_As_long(tmp); Py_DECREF(tmp); @@ -21331,7 +24698,228 @@ raise_neg_overflow: return (long) -1; } -static int __Pyx_check_binary_version(void) { +/* CIntToPy */ + static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) { + const long neg_one = (long) ((long) 0 - (long) 1), const_zero = (long) 0; + const int is_unsigned = neg_one > const_zero; + if (is_unsigned) { + if (sizeof(long) < sizeof(long)) { + return PyInt_FromLong((long) value); + } else if (sizeof(long) <= sizeof(unsigned long)) { + return PyLong_FromUnsignedLong((unsigned long) value); +#ifdef HAVE_LONG_LONG + } else if (sizeof(long) <= sizeof(unsigned PY_LONG_LONG)) { + return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); +#endif + } + } else { + if (sizeof(long) <= sizeof(long)) { + return PyInt_FromLong((long) value); +#ifdef HAVE_LONG_LONG + } else if (sizeof(long) <= sizeof(PY_LONG_LONG)) { + return PyLong_FromLongLong((PY_LONG_LONG) value); +#endif + } + } + { + int one = 1; int little = (int)*(unsigned char *)&one; + unsigned char *bytes = (unsigned char *)&value; + return _PyLong_FromByteArray(bytes, sizeof(long), + little, !is_unsigned); + } +} + +/* CIntFromPy */ + static CYTHON_INLINE char __Pyx_PyInt_As_char(PyObject *x) { + const char neg_one = (char) ((char) 0 - (char) 1), const_zero = (char) 0; + const int is_unsigned = neg_one > const_zero; +#if PY_MAJOR_VERSION < 3 + if (likely(PyInt_Check(x))) { + if (sizeof(char) < sizeof(long)) { + __PYX_VERIFY_RETURN_INT(char, long, PyInt_AS_LONG(x)) + } else { + long val = PyInt_AS_LONG(x); + if (is_unsigned && unlikely(val < 0)) { + goto raise_neg_overflow; + } + return (char) val; + } + } else +#endif + if (likely(PyLong_Check(x))) { + if (is_unsigned) { +#if CYTHON_USE_PYLONG_INTERNALS + const digit* digits = ((PyLongObject*)x)->ob_digit; + switch (Py_SIZE(x)) { + case 0: return (char) 0; + case 1: __PYX_VERIFY_RETURN_INT(char, digit, digits[0]) + case 2: + if (8 * sizeof(char) > 1 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(char, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(char) >= 2 * PyLong_SHIFT) { + return (char) (((((char)digits[1]) << PyLong_SHIFT) | (char)digits[0])); + } + } + break; + case 3: + if (8 * sizeof(char) > 2 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(char, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(char) >= 3 * PyLong_SHIFT) { + return (char) (((((((char)digits[2]) << PyLong_SHIFT) | (char)digits[1]) << PyLong_SHIFT) | (char)digits[0])); + } + } + break; + case 4: + if (8 * sizeof(char) > 3 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(char, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(char) >= 4 * PyLong_SHIFT) { + return (char) (((((((((char)digits[3]) << PyLong_SHIFT) | (char)digits[2]) << PyLong_SHIFT) | (char)digits[1]) << PyLong_SHIFT) | (char)digits[0])); + } + } + break; + } +#endif +#if CYTHON_COMPILING_IN_CPYTHON + if (unlikely(Py_SIZE(x) < 0)) { + goto raise_neg_overflow; + } +#else + { + int result = PyObject_RichCompareBool(x, Py_False, Py_LT); + if (unlikely(result < 0)) + return (char) -1; + if (unlikely(result == 1)) + goto raise_neg_overflow; + } +#endif + if (sizeof(char) <= sizeof(unsigned long)) { + __PYX_VERIFY_RETURN_INT_EXC(char, unsigned long, PyLong_AsUnsignedLong(x)) +#ifdef HAVE_LONG_LONG + } else if (sizeof(char) <= sizeof(unsigned PY_LONG_LONG)) { + __PYX_VERIFY_RETURN_INT_EXC(char, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) +#endif + } + } else { +#if CYTHON_USE_PYLONG_INTERNALS + const digit* digits = ((PyLongObject*)x)->ob_digit; + switch (Py_SIZE(x)) { + case 0: return (char) 0; + case -1: __PYX_VERIFY_RETURN_INT(char, sdigit, (sdigit) (-(sdigit)digits[0])) + case 1: __PYX_VERIFY_RETURN_INT(char, digit, +digits[0]) + case -2: + if (8 * sizeof(char) - 1 > 1 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(char, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(char) - 1 > 2 * PyLong_SHIFT) { + return (char) (((char)-1)*(((((char)digits[1]) << PyLong_SHIFT) | (char)digits[0]))); + } + } + break; + case 2: + if (8 * sizeof(char) > 1 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(char, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(char) - 1 > 2 * PyLong_SHIFT) { + return (char) ((((((char)digits[1]) << PyLong_SHIFT) | (char)digits[0]))); + } + } + break; + case -3: + if (8 * sizeof(char) - 1 > 2 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(char, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(char) - 1 > 3 * PyLong_SHIFT) { + return (char) (((char)-1)*(((((((char)digits[2]) << PyLong_SHIFT) | (char)digits[1]) << PyLong_SHIFT) | (char)digits[0]))); + } + } + break; + case 3: + if (8 * sizeof(char) > 2 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(char, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(char) - 1 > 3 * PyLong_SHIFT) { + return (char) ((((((((char)digits[2]) << PyLong_SHIFT) | (char)digits[1]) << PyLong_SHIFT) | (char)digits[0]))); + } + } + break; + case -4: + if (8 * sizeof(char) - 1 > 3 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(char, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(char) - 1 > 4 * PyLong_SHIFT) { + return (char) (((char)-1)*(((((((((char)digits[3]) << PyLong_SHIFT) | (char)digits[2]) << PyLong_SHIFT) | (char)digits[1]) << PyLong_SHIFT) | (char)digits[0]))); + } + } + break; + case 4: + if (8 * sizeof(char) > 3 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(char, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(char) - 1 > 4 * PyLong_SHIFT) { + return (char) ((((((((((char)digits[3]) << PyLong_SHIFT) | (char)digits[2]) << PyLong_SHIFT) | (char)digits[1]) << PyLong_SHIFT) | (char)digits[0]))); + } + } + break; + } +#endif + if (sizeof(char) <= sizeof(long)) { + __PYX_VERIFY_RETURN_INT_EXC(char, long, PyLong_AsLong(x)) +#ifdef HAVE_LONG_LONG + } else if (sizeof(char) <= sizeof(PY_LONG_LONG)) { + __PYX_VERIFY_RETURN_INT_EXC(char, PY_LONG_LONG, PyLong_AsLongLong(x)) +#endif + } + } + { +#if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) + PyErr_SetString(PyExc_RuntimeError, + "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); +#else + char val; + PyObject *v = __Pyx_PyNumber_IntOrLong(x); + #if PY_MAJOR_VERSION < 3 + if (likely(v) && !PyLong_Check(v)) { + PyObject *tmp = v; + v = PyNumber_Long(tmp); + Py_DECREF(tmp); + } + #endif + if (likely(v)) { + int one = 1; int is_little = (int)*(unsigned char *)&one; + unsigned char *bytes = (unsigned char *)&val; + int ret = _PyLong_AsByteArray((PyLongObject *)v, + bytes, sizeof(val), + is_little, !is_unsigned); + Py_DECREF(v); + if (likely(!ret)) + return val; + } +#endif + return (char) -1; + } + } else { + char val; + PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); + if (!tmp) return (char) -1; + val = __Pyx_PyInt_As_char(tmp); + Py_DECREF(tmp); + return val; + } +raise_overflow: + PyErr_SetString(PyExc_OverflowError, + "value too large to convert to char"); + return (char) -1; +raise_neg_overflow: + PyErr_SetString(PyExc_OverflowError, + "can't convert negative value to char"); + return (char) -1; +} + +/* CheckBinaryVersion */ + static int __Pyx_check_binary_version(void) { char ctversion[4], rtversion[4]; PyOS_snprintf(ctversion, 4, "%d.%d", PY_MAJOR_VERSION, PY_MINOR_VERSION); PyOS_snprintf(rtversion, 4, "%s", Py_GetVersion()); @@ -21346,88 +24934,8 @@ static int __Pyx_check_binary_version(void) { return 0; } -#ifndef __PYX_HAVE_RT_ImportModule -#define __PYX_HAVE_RT_ImportModule -static PyObject *__Pyx_ImportModule(const char *name) { - PyObject *py_name = 0; - PyObject *py_module = 0; - py_name = __Pyx_PyIdentifier_FromString(name); - if (!py_name) - goto bad; - py_module = PyImport_Import(py_name); - Py_DECREF(py_name); - return py_module; -bad: - Py_XDECREF(py_name); - return 0; -} -#endif - -#ifndef __PYX_HAVE_RT_ImportType -#define __PYX_HAVE_RT_ImportType -static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name, - size_t size, int strict) -{ - PyObject *py_module = 0; - PyObject *result = 0; - PyObject *py_name = 0; - char warning[200]; - Py_ssize_t basicsize; -#ifdef Py_LIMITED_API - PyObject *py_basicsize; -#endif - py_module = __Pyx_ImportModule(module_name); - if (!py_module) - goto bad; - py_name = __Pyx_PyIdentifier_FromString(class_name); - if (!py_name) - goto bad; - result = PyObject_GetAttr(py_module, py_name); - Py_DECREF(py_name); - py_name = 0; - Py_DECREF(py_module); - py_module = 0; - if (!result) - goto bad; - if (!PyType_Check(result)) { - PyErr_Format(PyExc_TypeError, - "%.200s.%.200s is not a type object", - module_name, class_name); - goto bad; - } -#ifndef Py_LIMITED_API - basicsize = ((PyTypeObject *)result)->tp_basicsize; -#else - py_basicsize = PyObject_GetAttrString(result, "__basicsize__"); - if (!py_basicsize) - goto bad; - basicsize = PyLong_AsSsize_t(py_basicsize); - Py_DECREF(py_basicsize); - py_basicsize = 0; - if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred()) - goto bad; -#endif - if (!strict && (size_t)basicsize > size) { - PyOS_snprintf(warning, sizeof(warning), - "%s.%s size changed, may indicate binary incompatibility", - module_name, class_name); - if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad; - } - else if ((size_t)basicsize != size) { - PyErr_Format(PyExc_ValueError, - "%.200s.%.200s has the wrong size, try recompiling", - module_name, class_name); - goto bad; - } - return (PyTypeObject *)result; -bad: - Py_XDECREF(py_module); - Py_XDECREF(result); - return NULL; -} -#endif - -static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) { +/* InitStrings */ + static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) { while (t->p) { #if PY_MAJOR_VERSION < 3 if (t->is_unicode) { @@ -21452,6 +24960,8 @@ static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) { #endif if (!*t->p) return -1; + if (PyObject_Hash(*t->p) == -1) + return -1; ++t; } return 0; @@ -21460,50 +24970,57 @@ static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) { static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(const char* c_str) { return __Pyx_PyUnicode_FromStringAndSize(c_str, (Py_ssize_t)strlen(c_str)); } -static CYTHON_INLINE char* __Pyx_PyObject_AsString(PyObject* o) { +static CYTHON_INLINE const char* __Pyx_PyObject_AsString(PyObject* o) { Py_ssize_t ignore; return __Pyx_PyObject_AsStringAndSize(o, &ignore); } -static CYTHON_INLINE char* __Pyx_PyObject_AsStringAndSize(PyObject* o, Py_ssize_t *length) { -#if CYTHON_COMPILING_IN_CPYTHON && (__PYX_DEFAULT_STRING_ENCODING_IS_ASCII || __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT) +#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII || __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT +#if !CYTHON_PEP393_ENABLED +static const char* __Pyx_PyUnicode_AsStringAndSize(PyObject* o, Py_ssize_t *length) { + char* defenc_c; + PyObject* defenc = _PyUnicode_AsDefaultEncodedString(o, NULL); + if (!defenc) return NULL; + defenc_c = PyBytes_AS_STRING(defenc); +#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII + { + char* end = defenc_c + PyBytes_GET_SIZE(defenc); + char* c; + for (c = defenc_c; c < end; c++) { + if ((unsigned char) (*c) >= 128) { + PyUnicode_AsASCIIString(o); + return NULL; + } + } + } +#endif + *length = PyBytes_GET_SIZE(defenc); + return defenc_c; +} +#else +static CYTHON_INLINE const char* __Pyx_PyUnicode_AsStringAndSize(PyObject* o, Py_ssize_t *length) { + if (unlikely(__Pyx_PyUnicode_READY(o) == -1)) return NULL; +#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII + if (likely(PyUnicode_IS_ASCII(o))) { + *length = PyUnicode_GET_LENGTH(o); + return PyUnicode_AsUTF8(o); + } else { + PyUnicode_AsASCIIString(o); + return NULL; + } +#else + return PyUnicode_AsUTF8AndSize(o, length); +#endif +} +#endif +#endif +static CYTHON_INLINE const char* __Pyx_PyObject_AsStringAndSize(PyObject* o, Py_ssize_t *length) { +#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII || __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT if ( #if PY_MAJOR_VERSION < 3 && __PYX_DEFAULT_STRING_ENCODING_IS_ASCII __Pyx_sys_getdefaultencoding_not_ascii && #endif PyUnicode_Check(o)) { -#if PY_VERSION_HEX < 0x03030000 - char* defenc_c; - PyObject* defenc = _PyUnicode_AsDefaultEncodedString(o, NULL); - if (!defenc) return NULL; - defenc_c = PyBytes_AS_STRING(defenc); -#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII - { - char* end = defenc_c + PyBytes_GET_SIZE(defenc); - char* c; - for (c = defenc_c; c < end; c++) { - if ((unsigned char) (*c) >= 128) { - PyUnicode_AsASCIIString(o); - return NULL; - } - } - } -#endif - *length = PyBytes_GET_SIZE(defenc); - return defenc_c; -#else - if (__Pyx_PyUnicode_READY(o) == -1) return NULL; -#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII - if (PyUnicode_IS_ASCII(o)) { - *length = PyUnicode_GET_LENGTH(o); - return PyUnicode_AsUTF8(o); - } else { - PyUnicode_AsASCIIString(o); - return NULL; - } -#else - return PyUnicode_AsUTF8AndSize(o, length); -#endif -#endif + return __Pyx_PyUnicode_AsStringAndSize(o, length); } else #endif #if (!CYTHON_COMPILING_IN_PYPY) || (defined(PyByteArray_AS_STRING) && defined(PyByteArray_GET_SIZE)) @@ -21527,43 +25044,74 @@ static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) { if (is_true | (x == Py_False) | (x == Py_None)) return is_true; else return PyObject_IsTrue(x); } -static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x) { +static CYTHON_INLINE int __Pyx_PyObject_IsTrueAndDecref(PyObject* x) { + int retval; + if (unlikely(!x)) return -1; + retval = __Pyx_PyObject_IsTrue(x); + Py_DECREF(x); + return retval; +} +static PyObject* __Pyx_PyNumber_IntOrLongWrongResultType(PyObject* result, const char* type_name) { +#if PY_MAJOR_VERSION >= 3 + if (PyLong_Check(result)) { + if (PyErr_WarnFormat(PyExc_DeprecationWarning, 1, + "__int__ returned non-int (type %.200s). " + "The ability to return an instance of a strict subclass of int " + "is deprecated, and may be removed in a future version of Python.", + Py_TYPE(result)->tp_name)) { + Py_DECREF(result); + return NULL; + } + return result; + } +#endif + PyErr_Format(PyExc_TypeError, + "__%.4s__ returned non-%.4s (type %.200s)", + type_name, type_name, Py_TYPE(result)->tp_name); + Py_DECREF(result); + return NULL; +} +static CYTHON_INLINE PyObject* __Pyx_PyNumber_IntOrLong(PyObject* x) { +#if CYTHON_USE_TYPE_SLOTS PyNumberMethods *m; +#endif const char *name = NULL; PyObject *res = NULL; #if PY_MAJOR_VERSION < 3 - if (PyInt_Check(x) || PyLong_Check(x)) + if (likely(PyInt_Check(x) || PyLong_Check(x))) #else - if (PyLong_Check(x)) + if (likely(PyLong_Check(x))) #endif return __Pyx_NewRef(x); +#if CYTHON_USE_TYPE_SLOTS m = Py_TYPE(x)->tp_as_number; -#if PY_MAJOR_VERSION < 3 + #if PY_MAJOR_VERSION < 3 if (m && m->nb_int) { name = "int"; - res = PyNumber_Int(x); + res = m->nb_int(x); } else if (m && m->nb_long) { name = "long"; - res = PyNumber_Long(x); + res = m->nb_long(x); } -#else - if (m && m->nb_int) { + #else + if (likely(m && m->nb_int)) { name = "int"; - res = PyNumber_Long(x); + res = m->nb_int(x); + } + #endif +#else + if (!PyBytes_CheckExact(x) && !PyUnicode_CheckExact(x)) { + res = PyNumber_Int(x); } #endif - if (res) { + if (likely(res)) { #if PY_MAJOR_VERSION < 3 - if (!PyInt_Check(res) && !PyLong_Check(res)) { + if (unlikely(!PyInt_Check(res) && !PyLong_Check(res))) { #else - if (!PyLong_Check(res)) { + if (unlikely(!PyLong_CheckExact(res))) { #endif - PyErr_Format(PyExc_TypeError, - "__%.4s__ returned non-%.4s (type %.200s)", - name, name, Py_TYPE(res)->tp_name); - Py_DECREF(res); - return NULL; + return __Pyx_PyNumber_IntOrLongWrongResultType(res, name); } } else if (!PyErr_Occurred()) { @@ -21580,7 +25128,7 @@ static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) { if (sizeof(Py_ssize_t) >= sizeof(long)) return PyInt_AS_LONG(b); else - return PyInt_AsSsize_t(x); + return PyInt_AsSsize_t(b); } #endif if (likely(PyLong_CheckExact(b))) { @@ -21634,6 +25182,9 @@ static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) { Py_DECREF(x); return ival; } +static CYTHON_INLINE PyObject * __Pyx_PyBool_FromLong(long b) { + return b ? __Pyx_NewRef(Py_True) : __Pyx_NewRef(Py_False); +} static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) { return PyInt_FromSize_t(ival); } diff --git a/GPy/kern/src/stationary_cython.pyx b/GPy/kern/src/stationary_cython.pyx index 75319aa3..0d8215ce 100644 --- a/GPy/kern/src/stationary_cython.pyx +++ b/GPy/kern/src/stationary_cython.pyx @@ -6,6 +6,8 @@ cimport numpy as np from cython.parallel import prange cimport cython +np.import_array() + ctypedef np.float64_t DTYPE_t cdef extern from "stationary_utils.h": diff --git a/GPy/models/state_space_cython.c b/GPy/models/state_space_cython.c index 3e6f3513..2f462748 100644 --- a/GPy/models/state_space_cython.c +++ b/GPy/models/state_space_cython.c @@ -1,36 +1,18 @@ -/* Generated by Cython 0.22 */ - -/* BEGIN: Cython Metadata -{ - "distutils": { - "depends": [] - } -} -END: Cython Metadata */ +/* Generated by Cython 0.29.2 */ #define PY_SSIZE_T_CLEAN -#ifndef CYTHON_USE_PYLONG_INTERNALS -#ifdef PYLONG_BITS_IN_DIGIT -#define CYTHON_USE_PYLONG_INTERNALS 0 -#else -#include "pyconfig.h" -#ifdef PYLONG_BITS_IN_DIGIT -#define CYTHON_USE_PYLONG_INTERNALS 1 -#else -#define CYTHON_USE_PYLONG_INTERNALS 0 -#endif -#endif -#endif #include "Python.h" #ifndef Py_PYTHON_H #error Python headers needed to compile C extensions, please install development version of Python. -#elif PY_VERSION_HEX < 0x02060000 || (0x03000000 <= PY_VERSION_HEX && PY_VERSION_HEX < 0x03020000) - #error Cython requires Python 2.6+ or Python 3.2+. +#elif PY_VERSION_HEX < 0x02060000 || (0x03000000 <= PY_VERSION_HEX && PY_VERSION_HEX < 0x03030000) + #error Cython requires Python 2.6+ or Python 3.3+. #else -#define CYTHON_ABI "0_22" +#define CYTHON_ABI "0_29_2" +#define CYTHON_HEX_VERSION 0x001D02F0 +#define CYTHON_FUTURE_DIVISION 0 #include #ifndef offsetof -#define offsetof(type, member) ( (size_t) & ((type*)0) -> member ) + #define offsetof(type, member) ( (size_t) & ((type*)0) -> member ) #endif #if !defined(WIN32) && !defined(MS_WINDOWS) #ifndef __stdcall @@ -49,6 +31,12 @@ END: Cython Metadata */ #ifndef DL_EXPORT #define DL_EXPORT(t) t #endif +#define __PYX_COMMA , +#ifndef HAVE_LONG_LONG + #if PY_VERSION_HEX >= 0x02070000 + #define HAVE_LONG_LONG + #endif +#endif #ifndef PY_LONG_LONG #define PY_LONG_LONG LONG_LONG #endif @@ -56,77 +44,462 @@ END: Cython Metadata */ #define Py_HUGE_VAL HUGE_VAL #endif #ifdef PYPY_VERSION -#define CYTHON_COMPILING_IN_PYPY 1 -#define CYTHON_COMPILING_IN_CPYTHON 0 + #define CYTHON_COMPILING_IN_PYPY 1 + #define CYTHON_COMPILING_IN_PYSTON 0 + #define CYTHON_COMPILING_IN_CPYTHON 0 + #undef CYTHON_USE_TYPE_SLOTS + #define CYTHON_USE_TYPE_SLOTS 0 + #undef CYTHON_USE_PYTYPE_LOOKUP + #define CYTHON_USE_PYTYPE_LOOKUP 0 + #if PY_VERSION_HEX < 0x03050000 + #undef CYTHON_USE_ASYNC_SLOTS + #define CYTHON_USE_ASYNC_SLOTS 0 + #elif !defined(CYTHON_USE_ASYNC_SLOTS) + #define CYTHON_USE_ASYNC_SLOTS 1 + #endif + #undef CYTHON_USE_PYLIST_INTERNALS + #define CYTHON_USE_PYLIST_INTERNALS 0 + #undef CYTHON_USE_UNICODE_INTERNALS + #define CYTHON_USE_UNICODE_INTERNALS 0 + #undef CYTHON_USE_UNICODE_WRITER + #define CYTHON_USE_UNICODE_WRITER 0 + #undef CYTHON_USE_PYLONG_INTERNALS + #define CYTHON_USE_PYLONG_INTERNALS 0 + #undef CYTHON_AVOID_BORROWED_REFS + #define CYTHON_AVOID_BORROWED_REFS 1 + #undef CYTHON_ASSUME_SAFE_MACROS + #define CYTHON_ASSUME_SAFE_MACROS 0 + #undef CYTHON_UNPACK_METHODS + #define CYTHON_UNPACK_METHODS 0 + #undef CYTHON_FAST_THREAD_STATE + #define CYTHON_FAST_THREAD_STATE 0 + #undef CYTHON_FAST_PYCALL + #define CYTHON_FAST_PYCALL 0 + #undef CYTHON_PEP489_MULTI_PHASE_INIT + #define CYTHON_PEP489_MULTI_PHASE_INIT 0 + #undef CYTHON_USE_TP_FINALIZE + #define CYTHON_USE_TP_FINALIZE 0 + #undef CYTHON_USE_DICT_VERSIONS + #define CYTHON_USE_DICT_VERSIONS 0 + #undef CYTHON_USE_EXC_INFO_STACK + #define CYTHON_USE_EXC_INFO_STACK 0 +#elif defined(PYSTON_VERSION) + #define CYTHON_COMPILING_IN_PYPY 0 + #define CYTHON_COMPILING_IN_PYSTON 1 + #define CYTHON_COMPILING_IN_CPYTHON 0 + #ifndef CYTHON_USE_TYPE_SLOTS + #define CYTHON_USE_TYPE_SLOTS 1 + #endif + #undef CYTHON_USE_PYTYPE_LOOKUP + #define CYTHON_USE_PYTYPE_LOOKUP 0 + #undef CYTHON_USE_ASYNC_SLOTS + #define CYTHON_USE_ASYNC_SLOTS 0 + #undef CYTHON_USE_PYLIST_INTERNALS + #define CYTHON_USE_PYLIST_INTERNALS 0 + #ifndef CYTHON_USE_UNICODE_INTERNALS + #define CYTHON_USE_UNICODE_INTERNALS 1 + #endif + #undef CYTHON_USE_UNICODE_WRITER + #define CYTHON_USE_UNICODE_WRITER 0 + #undef CYTHON_USE_PYLONG_INTERNALS + #define CYTHON_USE_PYLONG_INTERNALS 0 + #ifndef CYTHON_AVOID_BORROWED_REFS + #define CYTHON_AVOID_BORROWED_REFS 0 + #endif + #ifndef CYTHON_ASSUME_SAFE_MACROS + #define CYTHON_ASSUME_SAFE_MACROS 1 + #endif + #ifndef CYTHON_UNPACK_METHODS + #define CYTHON_UNPACK_METHODS 1 + #endif + #undef CYTHON_FAST_THREAD_STATE + #define CYTHON_FAST_THREAD_STATE 0 + #undef CYTHON_FAST_PYCALL + #define CYTHON_FAST_PYCALL 0 + #undef CYTHON_PEP489_MULTI_PHASE_INIT + #define CYTHON_PEP489_MULTI_PHASE_INIT 0 + #undef CYTHON_USE_TP_FINALIZE + #define CYTHON_USE_TP_FINALIZE 0 + #undef CYTHON_USE_DICT_VERSIONS + #define CYTHON_USE_DICT_VERSIONS 0 + #undef CYTHON_USE_EXC_INFO_STACK + #define CYTHON_USE_EXC_INFO_STACK 0 #else -#define CYTHON_COMPILING_IN_PYPY 0 -#define CYTHON_COMPILING_IN_CPYTHON 1 + #define CYTHON_COMPILING_IN_PYPY 0 + #define CYTHON_COMPILING_IN_PYSTON 0 + #define CYTHON_COMPILING_IN_CPYTHON 1 + #ifndef CYTHON_USE_TYPE_SLOTS + #define CYTHON_USE_TYPE_SLOTS 1 + #endif + #if PY_VERSION_HEX < 0x02070000 + #undef CYTHON_USE_PYTYPE_LOOKUP + #define CYTHON_USE_PYTYPE_LOOKUP 0 + #elif !defined(CYTHON_USE_PYTYPE_LOOKUP) + #define CYTHON_USE_PYTYPE_LOOKUP 1 + #endif + #if PY_MAJOR_VERSION < 3 + #undef CYTHON_USE_ASYNC_SLOTS + #define CYTHON_USE_ASYNC_SLOTS 0 + #elif !defined(CYTHON_USE_ASYNC_SLOTS) + #define CYTHON_USE_ASYNC_SLOTS 1 + #endif + #if PY_VERSION_HEX < 0x02070000 + #undef CYTHON_USE_PYLONG_INTERNALS + #define CYTHON_USE_PYLONG_INTERNALS 0 + #elif !defined(CYTHON_USE_PYLONG_INTERNALS) + #define CYTHON_USE_PYLONG_INTERNALS 1 + #endif + #ifndef CYTHON_USE_PYLIST_INTERNALS + #define CYTHON_USE_PYLIST_INTERNALS 1 + #endif + #ifndef CYTHON_USE_UNICODE_INTERNALS + #define CYTHON_USE_UNICODE_INTERNALS 1 + #endif + #if PY_VERSION_HEX < 0x030300F0 + #undef CYTHON_USE_UNICODE_WRITER + #define CYTHON_USE_UNICODE_WRITER 0 + #elif !defined(CYTHON_USE_UNICODE_WRITER) + #define CYTHON_USE_UNICODE_WRITER 1 + #endif + #ifndef CYTHON_AVOID_BORROWED_REFS + #define CYTHON_AVOID_BORROWED_REFS 0 + #endif + #ifndef CYTHON_ASSUME_SAFE_MACROS + #define CYTHON_ASSUME_SAFE_MACROS 1 + #endif + #ifndef CYTHON_UNPACK_METHODS + #define CYTHON_UNPACK_METHODS 1 + #endif + #ifndef CYTHON_FAST_THREAD_STATE + #define CYTHON_FAST_THREAD_STATE 1 + #endif + #ifndef CYTHON_FAST_PYCALL + #define CYTHON_FAST_PYCALL 1 + #endif + #ifndef CYTHON_PEP489_MULTI_PHASE_INIT + #define CYTHON_PEP489_MULTI_PHASE_INIT (PY_VERSION_HEX >= 0x03050000) + #endif + #ifndef CYTHON_USE_TP_FINALIZE + #define CYTHON_USE_TP_FINALIZE (PY_VERSION_HEX >= 0x030400a1) + #endif + #ifndef CYTHON_USE_DICT_VERSIONS + #define CYTHON_USE_DICT_VERSIONS (PY_VERSION_HEX >= 0x030600B1) + #endif + #ifndef CYTHON_USE_EXC_INFO_STACK + #define CYTHON_USE_EXC_INFO_STACK (PY_VERSION_HEX >= 0x030700A3) + #endif #endif +#if !defined(CYTHON_FAST_PYCCALL) +#define CYTHON_FAST_PYCCALL (CYTHON_FAST_PYCALL && PY_VERSION_HEX >= 0x030600B1) +#endif +#if CYTHON_USE_PYLONG_INTERNALS + #include "longintrepr.h" + #undef SHIFT + #undef BASE + #undef MASK + #ifdef SIZEOF_VOID_P + enum { __pyx_check_sizeof_voidp = 1 / (int)(SIZEOF_VOID_P == sizeof(void*)) }; + #endif +#endif +#ifndef __has_attribute + #define __has_attribute(x) 0 +#endif +#ifndef __has_cpp_attribute + #define __has_cpp_attribute(x) 0 +#endif +#ifndef CYTHON_RESTRICT + #if defined(__GNUC__) + #define CYTHON_RESTRICT __restrict__ + #elif defined(_MSC_VER) && _MSC_VER >= 1400 + #define CYTHON_RESTRICT __restrict + #elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L + #define CYTHON_RESTRICT restrict + #else + #define CYTHON_RESTRICT + #endif +#endif +#ifndef CYTHON_UNUSED +# if defined(__GNUC__) +# if !(defined(__cplusplus)) || (__GNUC__ > 3 || (__GNUC__ == 3 && __GNUC_MINOR__ >= 4)) +# define CYTHON_UNUSED __attribute__ ((__unused__)) +# else +# define CYTHON_UNUSED +# endif +# elif defined(__ICC) || (defined(__INTEL_COMPILER) && !defined(_MSC_VER)) +# define CYTHON_UNUSED __attribute__ ((__unused__)) +# else +# define CYTHON_UNUSED +# endif +#endif +#ifndef CYTHON_MAYBE_UNUSED_VAR +# if defined(__cplusplus) + template void CYTHON_MAYBE_UNUSED_VAR( const T& ) { } +# else +# define CYTHON_MAYBE_UNUSED_VAR(x) (void)(x) +# endif +#endif +#ifndef CYTHON_NCP_UNUSED +# if CYTHON_COMPILING_IN_CPYTHON +# define CYTHON_NCP_UNUSED +# else +# define CYTHON_NCP_UNUSED CYTHON_UNUSED +# endif +#endif +#define __Pyx_void_to_None(void_result) ((void)(void_result), Py_INCREF(Py_None), Py_None) +#ifdef _MSC_VER + #ifndef _MSC_STDINT_H_ + #if _MSC_VER < 1300 + typedef unsigned char uint8_t; + typedef unsigned int uint32_t; + #else + typedef unsigned __int8 uint8_t; + typedef unsigned __int32 uint32_t; + #endif + #endif +#else + #include +#endif +#ifndef CYTHON_FALLTHROUGH + #if defined(__cplusplus) && __cplusplus >= 201103L + #if __has_cpp_attribute(fallthrough) + #define CYTHON_FALLTHROUGH [[fallthrough]] + #elif __has_cpp_attribute(clang::fallthrough) + #define CYTHON_FALLTHROUGH [[clang::fallthrough]] + #elif __has_cpp_attribute(gnu::fallthrough) + #define CYTHON_FALLTHROUGH [[gnu::fallthrough]] + #endif + #endif + #ifndef CYTHON_FALLTHROUGH + #if __has_attribute(fallthrough) + #define CYTHON_FALLTHROUGH __attribute__((fallthrough)) + #else + #define CYTHON_FALLTHROUGH + #endif + #endif + #if defined(__clang__ ) && defined(__apple_build_version__) + #if __apple_build_version__ < 7000000 + #undef CYTHON_FALLTHROUGH + #define CYTHON_FALLTHROUGH + #endif + #endif +#endif + +#ifndef CYTHON_INLINE + #if defined(__clang__) + #define CYTHON_INLINE __inline__ __attribute__ ((__unused__)) + #elif defined(__GNUC__) + #define CYTHON_INLINE __inline__ + #elif defined(_MSC_VER) + #define CYTHON_INLINE __inline + #elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L + #define CYTHON_INLINE inline + #else + #define CYTHON_INLINE + #endif +#endif + #if CYTHON_COMPILING_IN_PYPY && PY_VERSION_HEX < 0x02070600 && !defined(Py_OptimizeFlag) -#define Py_OptimizeFlag 0 + #define Py_OptimizeFlag 0 #endif #define __PYX_BUILD_PY_SSIZE_T "n" #define CYTHON_FORMAT_SSIZE_T "z" #if PY_MAJOR_VERSION < 3 #define __Pyx_BUILTIN_MODULE_NAME "__builtin__" - #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) \ + #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)\ PyCode_New(a+k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) #define __Pyx_DefaultClassType PyClass_Type #else #define __Pyx_BUILTIN_MODULE_NAME "builtins" - #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) \ + #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)\ PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) #define __Pyx_DefaultClassType PyType_Type #endif -#if PY_MAJOR_VERSION >= 3 +#ifndef Py_TPFLAGS_CHECKTYPES #define Py_TPFLAGS_CHECKTYPES 0 +#endif +#ifndef Py_TPFLAGS_HAVE_INDEX #define Py_TPFLAGS_HAVE_INDEX 0 +#endif +#ifndef Py_TPFLAGS_HAVE_NEWBUFFER #define Py_TPFLAGS_HAVE_NEWBUFFER 0 #endif -#if PY_VERSION_HEX < 0x030400a1 && !defined(Py_TPFLAGS_HAVE_FINALIZE) +#ifndef Py_TPFLAGS_HAVE_FINALIZE #define Py_TPFLAGS_HAVE_FINALIZE 0 #endif +#ifndef METH_STACKLESS + #define METH_STACKLESS 0 +#endif +#if PY_VERSION_HEX <= 0x030700A3 || !defined(METH_FASTCALL) + #ifndef METH_FASTCALL + #define METH_FASTCALL 0x80 + #endif + typedef PyObject *(*__Pyx_PyCFunctionFast) (PyObject *self, PyObject *const *args, Py_ssize_t nargs); + typedef PyObject *(*__Pyx_PyCFunctionFastWithKeywords) (PyObject *self, PyObject *const *args, + Py_ssize_t nargs, PyObject *kwnames); +#else + #define __Pyx_PyCFunctionFast _PyCFunctionFast + #define __Pyx_PyCFunctionFastWithKeywords _PyCFunctionFastWithKeywords +#endif +#if CYTHON_FAST_PYCCALL +#define __Pyx_PyFastCFunction_Check(func)\ + ((PyCFunction_Check(func) && (METH_FASTCALL == (PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST | METH_KEYWORDS | METH_STACKLESS))))) +#else +#define __Pyx_PyFastCFunction_Check(func) 0 +#endif +#if CYTHON_USE_DICT_VERSIONS +#define __PYX_GET_DICT_VERSION(dict) (((PyDictObject*)(dict))->ma_version_tag) +#define __PYX_UPDATE_DICT_CACHE(dict, value, cache_var, version_var)\ + (version_var) = __PYX_GET_DICT_VERSION(dict);\ + (cache_var) = (value); +#define __PYX_PY_DICT_LOOKUP_IF_MODIFIED(VAR, DICT, LOOKUP) {\ + static PY_UINT64_T __pyx_dict_version = 0;\ + static PyObject *__pyx_dict_cached_value = NULL;\ + if (likely(__PYX_GET_DICT_VERSION(DICT) == __pyx_dict_version)) {\ + (VAR) = __pyx_dict_cached_value;\ + } else {\ + (VAR) = __pyx_dict_cached_value = (LOOKUP);\ + __pyx_dict_version = __PYX_GET_DICT_VERSION(DICT);\ + }\ + } +#else +#define __PYX_GET_DICT_VERSION(dict) (0) +#define __PYX_UPDATE_DICT_CACHE(dict, value, cache_var, version_var) +#define __PYX_PY_DICT_LOOKUP_IF_MODIFIED(VAR, DICT, LOOKUP) (VAR) = (LOOKUP); +#endif +#if CYTHON_COMPILING_IN_PYPY && !defined(PyObject_Malloc) + #define PyObject_Malloc(s) PyMem_Malloc(s) + #define PyObject_Free(p) PyMem_Free(p) + #define PyObject_Realloc(p) PyMem_Realloc(p) +#endif +#if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX < 0x030400A1 + #define PyMem_RawMalloc(n) PyMem_Malloc(n) + #define PyMem_RawRealloc(p, n) PyMem_Realloc(p, n) + #define PyMem_RawFree(p) PyMem_Free(p) +#endif +#if CYTHON_COMPILING_IN_PYSTON + #define __Pyx_PyCode_HasFreeVars(co) PyCode_HasFreeVars(co) + #define __Pyx_PyFrame_SetLineNumber(frame, lineno) PyFrame_SetLineNumber(frame, lineno) +#else + #define __Pyx_PyCode_HasFreeVars(co) (PyCode_GetNumFree(co) > 0) + #define __Pyx_PyFrame_SetLineNumber(frame, lineno) (frame)->f_lineno = (lineno) +#endif +#if !CYTHON_FAST_THREAD_STATE || PY_VERSION_HEX < 0x02070000 + #define __Pyx_PyThreadState_Current PyThreadState_GET() +#elif PY_VERSION_HEX >= 0x03060000 + #define __Pyx_PyThreadState_Current _PyThreadState_UncheckedGet() +#elif PY_VERSION_HEX >= 0x03000000 + #define __Pyx_PyThreadState_Current PyThreadState_GET() +#else + #define __Pyx_PyThreadState_Current _PyThreadState_Current +#endif +#if PY_VERSION_HEX < 0x030700A2 && !defined(PyThread_tss_create) && !defined(Py_tss_NEEDS_INIT) +#include "pythread.h" +#define Py_tss_NEEDS_INIT 0 +typedef int Py_tss_t; +static CYTHON_INLINE int PyThread_tss_create(Py_tss_t *key) { + *key = PyThread_create_key(); + return 0; // PyThread_create_key reports success always +} +static CYTHON_INLINE Py_tss_t * PyThread_tss_alloc(void) { + Py_tss_t *key = (Py_tss_t *)PyObject_Malloc(sizeof(Py_tss_t)); + *key = Py_tss_NEEDS_INIT; + return key; +} +static CYTHON_INLINE void PyThread_tss_free(Py_tss_t *key) { + PyObject_Free(key); +} +static CYTHON_INLINE int PyThread_tss_is_created(Py_tss_t *key) { + return *key != Py_tss_NEEDS_INIT; +} +static CYTHON_INLINE void PyThread_tss_delete(Py_tss_t *key) { + PyThread_delete_key(*key); + *key = Py_tss_NEEDS_INIT; +} +static CYTHON_INLINE int PyThread_tss_set(Py_tss_t *key, void *value) { + return PyThread_set_key_value(*key, value); +} +static CYTHON_INLINE void * PyThread_tss_get(Py_tss_t *key) { + return PyThread_get_key_value(*key); +} +#endif // TSS (Thread Specific Storage) API +#if CYTHON_COMPILING_IN_CPYTHON || defined(_PyDict_NewPresized) +#define __Pyx_PyDict_NewPresized(n) ((n <= 8) ? PyDict_New() : _PyDict_NewPresized(n)) +#else +#define __Pyx_PyDict_NewPresized(n) PyDict_New() +#endif +#if PY_MAJOR_VERSION >= 3 || CYTHON_FUTURE_DIVISION + #define __Pyx_PyNumber_Divide(x,y) PyNumber_TrueDivide(x,y) + #define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceTrueDivide(x,y) +#else + #define __Pyx_PyNumber_Divide(x,y) PyNumber_Divide(x,y) + #define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceDivide(x,y) +#endif +#if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX >= 0x030500A1 && CYTHON_USE_UNICODE_INTERNALS +#define __Pyx_PyDict_GetItemStr(dict, name) _PyDict_GetItem_KnownHash(dict, name, ((PyASCIIObject *) name)->hash) +#else +#define __Pyx_PyDict_GetItemStr(dict, name) PyDict_GetItem(dict, name) +#endif #if PY_VERSION_HEX > 0x03030000 && defined(PyUnicode_KIND) #define CYTHON_PEP393_ENABLED 1 - #define __Pyx_PyUnicode_READY(op) (likely(PyUnicode_IS_READY(op)) ? \ + #define __Pyx_PyUnicode_READY(op) (likely(PyUnicode_IS_READY(op)) ?\ 0 : _PyUnicode_Ready((PyObject *)(op))) #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_LENGTH(u) #define __Pyx_PyUnicode_READ_CHAR(u, i) PyUnicode_READ_CHAR(u, i) + #define __Pyx_PyUnicode_MAX_CHAR_VALUE(u) PyUnicode_MAX_CHAR_VALUE(u) #define __Pyx_PyUnicode_KIND(u) PyUnicode_KIND(u) #define __Pyx_PyUnicode_DATA(u) PyUnicode_DATA(u) #define __Pyx_PyUnicode_READ(k, d, i) PyUnicode_READ(k, d, i) + #define __Pyx_PyUnicode_WRITE(k, d, i, ch) PyUnicode_WRITE(k, d, i, ch) + #define __Pyx_PyUnicode_IS_TRUE(u) (0 != (likely(PyUnicode_IS_READY(u)) ? PyUnicode_GET_LENGTH(u) : PyUnicode_GET_SIZE(u))) #else #define CYTHON_PEP393_ENABLED 0 + #define PyUnicode_1BYTE_KIND 1 + #define PyUnicode_2BYTE_KIND 2 + #define PyUnicode_4BYTE_KIND 4 #define __Pyx_PyUnicode_READY(op) (0) #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_SIZE(u) #define __Pyx_PyUnicode_READ_CHAR(u, i) ((Py_UCS4)(PyUnicode_AS_UNICODE(u)[i])) + #define __Pyx_PyUnicode_MAX_CHAR_VALUE(u) ((sizeof(Py_UNICODE) == 2) ? 65535 : 1114111) #define __Pyx_PyUnicode_KIND(u) (sizeof(Py_UNICODE)) #define __Pyx_PyUnicode_DATA(u) ((void*)PyUnicode_AS_UNICODE(u)) #define __Pyx_PyUnicode_READ(k, d, i) ((void)(k), (Py_UCS4)(((Py_UNICODE*)d)[i])) + #define __Pyx_PyUnicode_WRITE(k, d, i, ch) (((void)(k)), ((Py_UNICODE*)d)[i] = ch) + #define __Pyx_PyUnicode_IS_TRUE(u) (0 != PyUnicode_GET_SIZE(u)) #endif #if CYTHON_COMPILING_IN_PYPY #define __Pyx_PyUnicode_Concat(a, b) PyNumber_Add(a, b) #define __Pyx_PyUnicode_ConcatSafe(a, b) PyNumber_Add(a, b) - #define __Pyx_PyFrozenSet_Size(s) PyObject_Size(s) #else #define __Pyx_PyUnicode_Concat(a, b) PyUnicode_Concat(a, b) - #define __Pyx_PyUnicode_ConcatSafe(a, b) ((unlikely((a) == Py_None) || unlikely((b) == Py_None)) ? \ + #define __Pyx_PyUnicode_ConcatSafe(a, b) ((unlikely((a) == Py_None) || unlikely((b) == Py_None)) ?\ PyNumber_Add(a, b) : __Pyx_PyUnicode_Concat(a, b)) - #define __Pyx_PyFrozenSet_Size(s) PySet_Size(s) #endif -#define __Pyx_PyString_FormatSafe(a, b) ((unlikely((a) == Py_None)) ? PyNumber_Remainder(a, b) : __Pyx_PyString_Format(a, b)) -#define __Pyx_PyUnicode_FormatSafe(a, b) ((unlikely((a) == Py_None)) ? PyNumber_Remainder(a, b) : PyUnicode_Format(a, b)) +#if CYTHON_COMPILING_IN_PYPY && !defined(PyUnicode_Contains) + #define PyUnicode_Contains(u, s) PySequence_Contains(u, s) +#endif +#if CYTHON_COMPILING_IN_PYPY && !defined(PyByteArray_Check) + #define PyByteArray_Check(obj) PyObject_TypeCheck(obj, &PyByteArray_Type) +#endif +#if CYTHON_COMPILING_IN_PYPY && !defined(PyObject_Format) + #define PyObject_Format(obj, fmt) PyObject_CallMethod(obj, "__format__", "O", fmt) +#endif +#define __Pyx_PyString_FormatSafe(a, b) ((unlikely((a) == Py_None || (PyString_Check(b) && !PyString_CheckExact(b)))) ? PyNumber_Remainder(a, b) : __Pyx_PyString_Format(a, b)) +#define __Pyx_PyUnicode_FormatSafe(a, b) ((unlikely((a) == Py_None || (PyUnicode_Check(b) && !PyUnicode_CheckExact(b)))) ? PyNumber_Remainder(a, b) : PyUnicode_Format(a, b)) #if PY_MAJOR_VERSION >= 3 #define __Pyx_PyString_Format(a, b) PyUnicode_Format(a, b) #else #define __Pyx_PyString_Format(a, b) PyString_Format(a, b) #endif +#if PY_MAJOR_VERSION < 3 && !defined(PyObject_ASCII) + #define PyObject_ASCII(o) PyObject_Repr(o) +#endif #if PY_MAJOR_VERSION >= 3 #define PyBaseString_Type PyUnicode_Type #define PyStringObject PyUnicodeObject #define PyString_Type PyUnicode_Type #define PyString_Check PyUnicode_Check #define PyString_CheckExact PyUnicode_CheckExact + #define PyObject_Unicode PyObject_Str #endif #if PY_MAJOR_VERSION >= 3 #define __Pyx_PyBaseString_Check(obj) PyUnicode_Check(obj) @@ -138,7 +511,11 @@ END: Cython Metadata */ #ifndef PySet_CheckExact #define PySet_CheckExact(obj) (Py_TYPE(obj) == &PySet_Type) #endif -#define __Pyx_TypeCheck(obj, type) PyObject_TypeCheck(obj, (PyTypeObject *)type) +#if CYTHON_ASSUME_SAFE_MACROS + #define __Pyx_PySequence_SIZE(seq) Py_SIZE(seq) +#else + #define __Pyx_PySequence_SIZE(seq) PySequence_Size(seq) +#endif #if PY_MAJOR_VERSION >= 3 #define PyIntObject PyLongObject #define PyInt_Type PyLong_Type @@ -173,71 +550,53 @@ END: Cython Metadata */ #define __Pyx_PyInt_AsHash_t PyInt_AsSsize_t #endif #if PY_MAJOR_VERSION >= 3 - #define __Pyx_PyMethod_New(func, self, klass) ((self) ? PyMethod_New(func, self) : PyInstanceMethod_New(func)) + #define __Pyx_PyMethod_New(func, self, klass) ((self) ? PyMethod_New(func, self) : (Py_INCREF(func), func)) #else #define __Pyx_PyMethod_New(func, self, klass) PyMethod_New(func, self, klass) #endif -#ifndef CYTHON_INLINE - #if defined(__GNUC__) - #define CYTHON_INLINE __inline__ - #elif defined(_MSC_VER) - #define CYTHON_INLINE __inline - #elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L - #define CYTHON_INLINE inline +#if CYTHON_USE_ASYNC_SLOTS + #if PY_VERSION_HEX >= 0x030500B1 + #define __Pyx_PyAsyncMethodsStruct PyAsyncMethods + #define __Pyx_PyType_AsAsync(obj) (Py_TYPE(obj)->tp_as_async) #else - #define CYTHON_INLINE + #define __Pyx_PyType_AsAsync(obj) ((__Pyx_PyAsyncMethodsStruct*) (Py_TYPE(obj)->tp_reserved)) #endif +#else + #define __Pyx_PyType_AsAsync(obj) NULL #endif -#ifndef CYTHON_RESTRICT - #if defined(__GNUC__) - #define CYTHON_RESTRICT __restrict__ - #elif defined(_MSC_VER) && _MSC_VER >= 1400 - #define CYTHON_RESTRICT __restrict - #elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L - #define CYTHON_RESTRICT restrict - #else - #define CYTHON_RESTRICT - #endif +#ifndef __Pyx_PyAsyncMethodsStruct + typedef struct { + unaryfunc am_await; + unaryfunc am_aiter; + unaryfunc am_anext; + } __Pyx_PyAsyncMethodsStruct; #endif + +#if defined(WIN32) || defined(MS_WINDOWS) + #define _USE_MATH_DEFINES +#endif +#include #ifdef NAN #define __PYX_NAN() ((float) NAN) #else static CYTHON_INLINE float __PYX_NAN() { - /* Initialize NaN. The sign is irrelevant, an exponent with all bits 1 and - a nonzero mantissa means NaN. If the first bit in the mantissa is 1, it is - a quiet NaN. */ float value; memset(&value, 0xFF, sizeof(value)); return value; } #endif -#define __Pyx_void_to_None(void_result) (void_result, Py_INCREF(Py_None), Py_None) -#ifdef __cplusplus -template -void __Pyx_call_destructor(T* x) { - x->~T(); -} -template -class __Pyx_FakeReference { - public: - __Pyx_FakeReference() : ptr(NULL) { } - __Pyx_FakeReference(T& ref) : ptr(&ref) { } - T *operator->() { return ptr; } - operator T&() { return *ptr; } - private: - T *ptr; -}; -#endif - - -#if PY_MAJOR_VERSION >= 3 - #define __Pyx_PyNumber_Divide(x,y) PyNumber_TrueDivide(x,y) - #define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceTrueDivide(x,y) +#if defined(__CYGWIN__) && defined(_LDBL_EQ_DBL) +#define __Pyx_truncl trunc #else - #define __Pyx_PyNumber_Divide(x,y) PyNumber_Divide(x,y) - #define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceDivide(x,y) +#define __Pyx_truncl truncl #endif + +#define __PYX_ERR(f_index, lineno, Ln_error) \ +{ \ + __pyx_filename = __pyx_f[f_index]; __pyx_lineno = lineno; __pyx_clineno = __LINE__; goto Ln_error; \ +} + #ifndef __PYX_EXTERN_C #ifdef __cplusplus #define __PYX_EXTERN_C extern "C" @@ -246,15 +605,11 @@ class __Pyx_FakeReference { #endif #endif -#if defined(WIN32) || defined(MS_WINDOWS) -#define _USE_MATH_DEFINES -#endif -#include #define __PYX_HAVE__GPy__models__state_space_cython #define __PYX_HAVE_API__GPy__models__state_space_cython -#include "string.h" -#include "stdio.h" -#include "stdlib.h" +/* Early includes */ +#include +#include #include "numpy/arrayobject.h" #include "numpy/ufuncobject.h" #include "numpy/npy_math.h" @@ -262,24 +617,11 @@ class __Pyx_FakeReference { #include #endif /* _OPENMP */ -#ifdef PYREX_WITHOUT_ASSERTIONS +#if defined(PYREX_WITHOUT_ASSERTIONS) && !defined(CYTHON_WITHOUT_ASSERTIONS) #define CYTHON_WITHOUT_ASSERTIONS #endif -#ifndef CYTHON_UNUSED -# if defined(__GNUC__) -# if !(defined(__cplusplus)) || (__GNUC__ > 3 || (__GNUC__ == 3 && __GNUC_MINOR__ >= 4)) -# define CYTHON_UNUSED __attribute__ ((__unused__)) -# else -# define CYTHON_UNUSED -# endif -# elif defined(__ICC) || (defined(__INTEL_COMPILER) && !defined(_MSC_VER)) -# define CYTHON_UNUSED __attribute__ ((__unused__)) -# else -# define CYTHON_UNUSED -# endif -#endif -typedef struct {PyObject **p; char *s; const Py_ssize_t n; const char* encoding; +typedef struct {PyObject **p; const char *s; const Py_ssize_t n; const char* encoding; const char is_unicode; const char is_str; const char intern; } __Pyx_StringTabEntry; #define __PYX_DEFAULT_STRING_ENCODING_IS_ASCII 0 @@ -287,18 +629,39 @@ typedef struct {PyObject **p; char *s; const Py_ssize_t n; const char* encoding; #define __PYX_DEFAULT_STRING_ENCODING "" #define __Pyx_PyObject_FromString __Pyx_PyBytes_FromString #define __Pyx_PyObject_FromStringAndSize __Pyx_PyBytes_FromStringAndSize -#define __Pyx_fits_Py_ssize_t(v, type, is_signed) ( \ - (sizeof(type) < sizeof(Py_ssize_t)) || \ - (sizeof(type) > sizeof(Py_ssize_t) && \ - likely(v < (type)PY_SSIZE_T_MAX || \ - v == (type)PY_SSIZE_T_MAX) && \ - (!is_signed || likely(v > (type)PY_SSIZE_T_MIN || \ - v == (type)PY_SSIZE_T_MIN))) || \ - (sizeof(type) == sizeof(Py_ssize_t) && \ - (is_signed || likely(v < (type)PY_SSIZE_T_MAX || \ +#define __Pyx_uchar_cast(c) ((unsigned char)c) +#define __Pyx_long_cast(x) ((long)x) +#define __Pyx_fits_Py_ssize_t(v, type, is_signed) (\ + (sizeof(type) < sizeof(Py_ssize_t)) ||\ + (sizeof(type) > sizeof(Py_ssize_t) &&\ + likely(v < (type)PY_SSIZE_T_MAX ||\ + v == (type)PY_SSIZE_T_MAX) &&\ + (!is_signed || likely(v > (type)PY_SSIZE_T_MIN ||\ + v == (type)PY_SSIZE_T_MIN))) ||\ + (sizeof(type) == sizeof(Py_ssize_t) &&\ + (is_signed || likely(v < (type)PY_SSIZE_T_MAX ||\ v == (type)PY_SSIZE_T_MAX))) ) -static CYTHON_INLINE char* __Pyx_PyObject_AsString(PyObject*); -static CYTHON_INLINE char* __Pyx_PyObject_AsStringAndSize(PyObject*, Py_ssize_t* length); +static CYTHON_INLINE int __Pyx_is_valid_index(Py_ssize_t i, Py_ssize_t limit) { + return (size_t) i < (size_t) limit; +} +#if defined (__cplusplus) && __cplusplus >= 201103L + #include + #define __Pyx_sst_abs(value) std::abs(value) +#elif SIZEOF_INT >= SIZEOF_SIZE_T + #define __Pyx_sst_abs(value) abs(value) +#elif SIZEOF_LONG >= SIZEOF_SIZE_T + #define __Pyx_sst_abs(value) labs(value) +#elif defined (_MSC_VER) + #define __Pyx_sst_abs(value) ((Py_ssize_t)_abs64(value)) +#elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L + #define __Pyx_sst_abs(value) llabs(value) +#elif defined (__GNUC__) + #define __Pyx_sst_abs(value) __builtin_llabs(value) +#else + #define __Pyx_sst_abs(value) ((value<0) ? -value : value) +#endif +static CYTHON_INLINE const char* __Pyx_PyObject_AsString(PyObject*); +static CYTHON_INLINE const char* __Pyx_PyObject_AsStringAndSize(PyObject*, Py_ssize_t* length); #define __Pyx_PyByteArray_FromString(s) PyByteArray_FromStringAndSize((const char*)s, strlen((const char*)s)) #define __Pyx_PyByteArray_FromStringAndSize(s, l) PyByteArray_FromStringAndSize((const char*)s, l) #define __Pyx_PyBytes_FromString PyBytes_FromString @@ -311,38 +674,52 @@ static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(const char*); #define __Pyx_PyStr_FromString __Pyx_PyUnicode_FromString #define __Pyx_PyStr_FromStringAndSize __Pyx_PyUnicode_FromStringAndSize #endif -#define __Pyx_PyObject_AsSString(s) ((signed char*) __Pyx_PyObject_AsString(s)) -#define __Pyx_PyObject_AsUString(s) ((unsigned char*) __Pyx_PyObject_AsString(s)) +#define __Pyx_PyBytes_AsWritableString(s) ((char*) PyBytes_AS_STRING(s)) +#define __Pyx_PyBytes_AsWritableSString(s) ((signed char*) PyBytes_AS_STRING(s)) +#define __Pyx_PyBytes_AsWritableUString(s) ((unsigned char*) PyBytes_AS_STRING(s)) +#define __Pyx_PyBytes_AsString(s) ((const char*) PyBytes_AS_STRING(s)) +#define __Pyx_PyBytes_AsSString(s) ((const signed char*) PyBytes_AS_STRING(s)) +#define __Pyx_PyBytes_AsUString(s) ((const unsigned char*) PyBytes_AS_STRING(s)) +#define __Pyx_PyObject_AsWritableString(s) ((char*) __Pyx_PyObject_AsString(s)) +#define __Pyx_PyObject_AsWritableSString(s) ((signed char*) __Pyx_PyObject_AsString(s)) +#define __Pyx_PyObject_AsWritableUString(s) ((unsigned char*) __Pyx_PyObject_AsString(s)) +#define __Pyx_PyObject_AsSString(s) ((const signed char*) __Pyx_PyObject_AsString(s)) +#define __Pyx_PyObject_AsUString(s) ((const unsigned char*) __Pyx_PyObject_AsString(s)) #define __Pyx_PyObject_FromCString(s) __Pyx_PyObject_FromString((const char*)s) #define __Pyx_PyBytes_FromCString(s) __Pyx_PyBytes_FromString((const char*)s) #define __Pyx_PyByteArray_FromCString(s) __Pyx_PyByteArray_FromString((const char*)s) #define __Pyx_PyStr_FromCString(s) __Pyx_PyStr_FromString((const char*)s) #define __Pyx_PyUnicode_FromCString(s) __Pyx_PyUnicode_FromString((const char*)s) -#if PY_MAJOR_VERSION < 3 -static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u) -{ +static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u) { const Py_UNICODE *u_end = u; while (*u_end++) ; return (size_t)(u_end - u - 1); } -#else -#define __Pyx_Py_UNICODE_strlen Py_UNICODE_strlen -#endif #define __Pyx_PyUnicode_FromUnicode(u) PyUnicode_FromUnicode(u, __Pyx_Py_UNICODE_strlen(u)) #define __Pyx_PyUnicode_FromUnicodeAndLength PyUnicode_FromUnicode #define __Pyx_PyUnicode_AsUnicode PyUnicode_AsUnicode -#define __Pyx_Owned_Py_None(b) (Py_INCREF(Py_None), Py_None) -#define __Pyx_PyBool_FromLong(b) ((b) ? (Py_INCREF(Py_True), Py_True) : (Py_INCREF(Py_False), Py_False)) +#define __Pyx_NewRef(obj) (Py_INCREF(obj), obj) +#define __Pyx_Owned_Py_None(b) __Pyx_NewRef(Py_None) +static CYTHON_INLINE PyObject * __Pyx_PyBool_FromLong(long b); static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject*); -static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x); +static CYTHON_INLINE int __Pyx_PyObject_IsTrueAndDecref(PyObject*); +static CYTHON_INLINE PyObject* __Pyx_PyNumber_IntOrLong(PyObject* x); +#define __Pyx_PySequence_Tuple(obj)\ + (likely(PyTuple_CheckExact(obj)) ? __Pyx_NewRef(obj) : PySequence_Tuple(obj)) static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject*); static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t); -#if CYTHON_COMPILING_IN_CPYTHON +#if CYTHON_ASSUME_SAFE_MACROS #define __pyx_PyFloat_AsDouble(x) (PyFloat_CheckExact(x) ? PyFloat_AS_DOUBLE(x) : PyFloat_AsDouble(x)) #else #define __pyx_PyFloat_AsDouble(x) PyFloat_AsDouble(x) #endif #define __pyx_PyFloat_AsFloat(x) ((float) __pyx_PyFloat_AsDouble(x)) +#if PY_MAJOR_VERSION >= 3 +#define __Pyx_PyNumber_Int(x) (PyLong_CheckExact(x) ? __Pyx_NewRef(x) : PyNumber_Long(x)) +#else +#define __Pyx_PyNumber_Int(x) (PyInt_CheckExact(x) ? __Pyx_NewRef(x) : PyNumber_Int(x)) +#endif +#define __Pyx_PyNumber_Float(x) (PyFloat_CheckExact(x) ? __Pyx_NewRef(x) : PyNumber_Float(x)) #if PY_MAJOR_VERSION < 3 && __PYX_DEFAULT_STRING_ENCODING_IS_ASCII static int __Pyx_sys_getdefaultencoding_not_ascii; static int __Pyx_init_sys_getdefaultencoding_params(void) { @@ -406,7 +783,7 @@ static int __Pyx_init_sys_getdefaultencoding_params(void) { if (!default_encoding) goto bad; default_encoding_c = PyBytes_AsString(default_encoding); if (!default_encoding_c) goto bad; - __PYX_DEFAULT_STRING_ENCODING = (char*) malloc(strlen(default_encoding_c)); + __PYX_DEFAULT_STRING_ENCODING = (char*) malloc(strlen(default_encoding_c) + 1); if (!__PYX_DEFAULT_STRING_ENCODING) goto bad; strcpy(__PYX_DEFAULT_STRING_ENCODING, default_encoding_c); Py_DECREF(default_encoding); @@ -427,17 +804,21 @@ bad: #define likely(x) (x) #define unlikely(x) (x) #endif /* __GNUC__ */ +static CYTHON_INLINE void __Pyx_pretend_to_initialize(void* ptr) { (void)ptr; } -static PyObject *__pyx_m; +static PyObject *__pyx_m = NULL; static PyObject *__pyx_d; static PyObject *__pyx_b; +static PyObject *__pyx_cython_runtime = NULL; static PyObject *__pyx_empty_tuple; static PyObject *__pyx_empty_bytes; +static PyObject *__pyx_empty_unicode; static int __pyx_lineno; static int __pyx_clineno = 0; static const char * __pyx_cfilenm= __FILE__; static const char *__pyx_filename; +/* Header.proto */ #if !defined(CYTHON_CCOMPLEX) #if defined(__cplusplus) #define CYTHON_CCOMPLEX 1 @@ -462,9 +843,11 @@ static const char *__pyx_filename; static const char *__pyx_f[] = { "GPy/models/state_space_cython.pyx", + "stringsource", "__init__.pxd", "type.pxd", }; +/* BufferFormatStructs.proto */ #define IS_UNSIGNED(type) (((type) -1) > 0) struct __Pyx_StructField_; #define __PYX_BUF_FLAGS_PACKED_STRUCT (1 << 0) @@ -501,7 +884,7 @@ typedef struct { } __Pyx_BufFmt_Context; -/* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":726 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":776 * # in Cython to enable them only on the right systems. * * ctypedef npy_int8 int8_t # <<<<<<<<<<<<<< @@ -510,7 +893,7 @@ typedef struct { */ typedef npy_int8 __pyx_t_5numpy_int8_t; -/* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":727 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":777 * * ctypedef npy_int8 int8_t * ctypedef npy_int16 int16_t # <<<<<<<<<<<<<< @@ -519,7 +902,7 @@ typedef npy_int8 __pyx_t_5numpy_int8_t; */ typedef npy_int16 __pyx_t_5numpy_int16_t; -/* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":728 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":778 * ctypedef npy_int8 int8_t * ctypedef npy_int16 int16_t * ctypedef npy_int32 int32_t # <<<<<<<<<<<<<< @@ -528,7 +911,7 @@ typedef npy_int16 __pyx_t_5numpy_int16_t; */ typedef npy_int32 __pyx_t_5numpy_int32_t; -/* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":729 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":779 * ctypedef npy_int16 int16_t * ctypedef npy_int32 int32_t * ctypedef npy_int64 int64_t # <<<<<<<<<<<<<< @@ -537,7 +920,7 @@ typedef npy_int32 __pyx_t_5numpy_int32_t; */ typedef npy_int64 __pyx_t_5numpy_int64_t; -/* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":733 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":783 * #ctypedef npy_int128 int128_t * * ctypedef npy_uint8 uint8_t # <<<<<<<<<<<<<< @@ -546,7 +929,7 @@ typedef npy_int64 __pyx_t_5numpy_int64_t; */ typedef npy_uint8 __pyx_t_5numpy_uint8_t; -/* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":734 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":784 * * ctypedef npy_uint8 uint8_t * ctypedef npy_uint16 uint16_t # <<<<<<<<<<<<<< @@ -555,7 +938,7 @@ typedef npy_uint8 __pyx_t_5numpy_uint8_t; */ typedef npy_uint16 __pyx_t_5numpy_uint16_t; -/* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":735 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":785 * ctypedef npy_uint8 uint8_t * ctypedef npy_uint16 uint16_t * ctypedef npy_uint32 uint32_t # <<<<<<<<<<<<<< @@ -564,7 +947,7 @@ typedef npy_uint16 __pyx_t_5numpy_uint16_t; */ typedef npy_uint32 __pyx_t_5numpy_uint32_t; -/* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":736 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":786 * ctypedef npy_uint16 uint16_t * ctypedef npy_uint32 uint32_t * ctypedef npy_uint64 uint64_t # <<<<<<<<<<<<<< @@ -573,7 +956,7 @@ typedef npy_uint32 __pyx_t_5numpy_uint32_t; */ typedef npy_uint64 __pyx_t_5numpy_uint64_t; -/* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":740 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":790 * #ctypedef npy_uint128 uint128_t * * ctypedef npy_float32 float32_t # <<<<<<<<<<<<<< @@ -582,7 +965,7 @@ typedef npy_uint64 __pyx_t_5numpy_uint64_t; */ typedef npy_float32 __pyx_t_5numpy_float32_t; -/* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":741 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":791 * * ctypedef npy_float32 float32_t * ctypedef npy_float64 float64_t # <<<<<<<<<<<<<< @@ -591,7 +974,7 @@ typedef npy_float32 __pyx_t_5numpy_float32_t; */ typedef npy_float64 __pyx_t_5numpy_float64_t; -/* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":750 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":800 * # The int types are mapped a bit surprising -- * # numpy.int corresponds to 'l' and numpy.long to 'q' * ctypedef npy_long int_t # <<<<<<<<<<<<<< @@ -600,7 +983,7 @@ typedef npy_float64 __pyx_t_5numpy_float64_t; */ typedef npy_long __pyx_t_5numpy_int_t; -/* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":751 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":801 * # numpy.int corresponds to 'l' and numpy.long to 'q' * ctypedef npy_long int_t * ctypedef npy_longlong long_t # <<<<<<<<<<<<<< @@ -609,7 +992,7 @@ typedef npy_long __pyx_t_5numpy_int_t; */ typedef npy_longlong __pyx_t_5numpy_long_t; -/* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":752 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":802 * ctypedef npy_long int_t * ctypedef npy_longlong long_t * ctypedef npy_longlong longlong_t # <<<<<<<<<<<<<< @@ -618,7 +1001,7 @@ typedef npy_longlong __pyx_t_5numpy_long_t; */ typedef npy_longlong __pyx_t_5numpy_longlong_t; -/* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":754 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":804 * ctypedef npy_longlong longlong_t * * ctypedef npy_ulong uint_t # <<<<<<<<<<<<<< @@ -627,7 +1010,7 @@ typedef npy_longlong __pyx_t_5numpy_longlong_t; */ typedef npy_ulong __pyx_t_5numpy_uint_t; -/* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":755 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":805 * * ctypedef npy_ulong uint_t * ctypedef npy_ulonglong ulong_t # <<<<<<<<<<<<<< @@ -636,7 +1019,7 @@ typedef npy_ulong __pyx_t_5numpy_uint_t; */ typedef npy_ulonglong __pyx_t_5numpy_ulong_t; -/* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":756 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":806 * ctypedef npy_ulong uint_t * ctypedef npy_ulonglong ulong_t * ctypedef npy_ulonglong ulonglong_t # <<<<<<<<<<<<<< @@ -645,7 +1028,7 @@ typedef npy_ulonglong __pyx_t_5numpy_ulong_t; */ typedef npy_ulonglong __pyx_t_5numpy_ulonglong_t; -/* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":758 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":808 * ctypedef npy_ulonglong ulonglong_t * * ctypedef npy_intp intp_t # <<<<<<<<<<<<<< @@ -654,7 +1037,7 @@ typedef npy_ulonglong __pyx_t_5numpy_ulonglong_t; */ typedef npy_intp __pyx_t_5numpy_intp_t; -/* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":759 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":809 * * ctypedef npy_intp intp_t * ctypedef npy_uintp uintp_t # <<<<<<<<<<<<<< @@ -663,7 +1046,7 @@ typedef npy_intp __pyx_t_5numpy_intp_t; */ typedef npy_uintp __pyx_t_5numpy_uintp_t; -/* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":761 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":811 * ctypedef npy_uintp uintp_t * * ctypedef npy_double float_t # <<<<<<<<<<<<<< @@ -672,7 +1055,7 @@ typedef npy_uintp __pyx_t_5numpy_uintp_t; */ typedef npy_double __pyx_t_5numpy_float_t; -/* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":762 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":812 * * ctypedef npy_double float_t * ctypedef npy_double double_t # <<<<<<<<<<<<<< @@ -681,7 +1064,7 @@ typedef npy_double __pyx_t_5numpy_float_t; */ typedef npy_double __pyx_t_5numpy_double_t; -/* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":763 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":813 * ctypedef npy_double float_t * ctypedef npy_double double_t * ctypedef npy_longdouble longdouble_t # <<<<<<<<<<<<<< @@ -707,6 +1090,7 @@ typedef __pyx_t_5numpy_float64_t __pyx_t_3GPy_6models_18state_space_cython_DTYPE * # Template class for dynamic callables */ typedef __pyx_t_5numpy_int64_t __pyx_t_3GPy_6models_18state_space_cython_DTYPE_int_t; +/* Declarations.proto */ #if CYTHON_CCOMPLEX #ifdef __cplusplus typedef ::std::complex< float > __pyx_t_float_complex; @@ -716,7 +1100,9 @@ typedef __pyx_t_5numpy_int64_t __pyx_t_3GPy_6models_18state_space_cython_DTYPE_i #else typedef struct { float real, imag; } __pyx_t_float_complex; #endif +static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float, float); +/* Declarations.proto */ #if CYTHON_CCOMPLEX #ifdef __cplusplus typedef ::std::complex< double > __pyx_t_double_complex; @@ -726,6 +1112,7 @@ typedef __pyx_t_5numpy_int64_t __pyx_t_3GPy_6models_18state_space_cython_DTYPE_i #else typedef struct { double real, imag; } __pyx_t_double_complex; #endif +static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double, double); /*--- Type declarations ---*/ @@ -737,7 +1124,7 @@ struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython; struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython; struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython; -/* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":765 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":815 * ctypedef npy_longdouble longdouble_t * * ctypedef npy_cfloat cfloat_t # <<<<<<<<<<<<<< @@ -746,7 +1133,7 @@ struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython; */ typedef npy_cfloat __pyx_t_5numpy_cfloat_t; -/* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":766 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":816 * * ctypedef npy_cfloat cfloat_t * ctypedef npy_cdouble cdouble_t # <<<<<<<<<<<<<< @@ -755,7 +1142,7 @@ typedef npy_cfloat __pyx_t_5numpy_cfloat_t; */ typedef npy_cdouble __pyx_t_5numpy_cdouble_t; -/* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":767 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":817 * ctypedef npy_cfloat cfloat_t * ctypedef npy_cdouble cdouble_t * ctypedef npy_clongdouble clongdouble_t # <<<<<<<<<<<<<< @@ -764,7 +1151,7 @@ typedef npy_cdouble __pyx_t_5numpy_cdouble_t; */ typedef npy_clongdouble __pyx_t_5numpy_clongdouble_t; -/* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":769 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":819 * ctypedef npy_clongdouble clongdouble_t * * ctypedef npy_cdouble complex_t # <<<<<<<<<<<<<< @@ -776,6 +1163,7 @@ struct __pyx_opt_args_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cyth struct __pyx_opt_args_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_reset; struct __pyx_opt_args_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_reset; struct __pyx_opt_args_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_reset; +struct __pyx_opt_args_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_Q_inverse; /* "GPy/models/state_space_cython.pyx":40 * raise NotImplemented("(cython) dQk is not implemented!") @@ -813,7 +1201,7 @@ struct __pyx_opt_args_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_ int compute_derivatives; }; -/* "GPy/models/state_space_cython.pyx":444 +/* "GPy/models/state_space_cython.pyx":446 * return np.dot(A, m) # default dynamic model * * cpdef reset(self, bint compute_derivatives=False): # <<<<<<<<<<<<<< @@ -825,6 +1213,18 @@ struct __pyx_opt_args_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython int compute_derivatives; }; +/* "GPy/models/state_space_cython.pyx":501 + * + * + * cpdef Q_inverse(self, int k, float jitter=0.0): # <<<<<<<<<<<<<< + * """ + * Square root of the noise matrix Q + */ +struct __pyx_opt_args_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_Q_inverse { + int __pyx_n; + float jitter; +}; + /* "GPy/models/state_space_cython.pyx":21 * * # Template class for dynamic callables @@ -1043,10 +1443,12 @@ static struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_Std_Dynamic_Cal struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_AQcompute_batch_Cython { struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_Q_handling_Cython __pyx_base; 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#else #define __Pyx_PyObject_GetAttrStr(o,n) PyObject_GetAttr(o,n) #endif +/* GetBuiltinName.proto */ static PyObject *__Pyx_GetBuiltinName(PyObject *name); -static CYTHON_INLINE int __Pyx_GetBufferAndValidate(Py_buffer* buf, PyObject* obj, - __Pyx_TypeInfo* dtype, int flags, int nd, int cast, __Pyx_BufFmt_StackElem* stack); -static CYTHON_INLINE void __Pyx_SafeReleaseBuffer(Py_buffer* info); +/* IsLittleEndian.proto */ +static CYTHON_INLINE int __Pyx_Is_Little_Endian(void); +/* BufferFormatCheck.proto */ +static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const char* ts); +static void __Pyx_BufFmt_Init(__Pyx_BufFmt_Context* ctx, + __Pyx_BufFmt_StackElem* stack, + __Pyx_TypeInfo* type); + +/* BufferGetAndValidate.proto */ +#define __Pyx_GetBufferAndValidate(buf, obj, dtype, flags, nd, cast, stack)\ + ((obj == Py_None || obj == NULL) ?\ + (__Pyx_ZeroBuffer(buf), 0) :\ + __Pyx__GetBufferAndValidate(buf, obj, dtype, flags, nd, cast, stack)) +static int __Pyx__GetBufferAndValidate(Py_buffer* buf, PyObject* obj, + __Pyx_TypeInfo* dtype, int flags, int nd, int cast, __Pyx_BufFmt_StackElem* stack); +static void __Pyx_ZeroBuffer(Py_buffer* buf); +static CYTHON_INLINE void __Pyx_SafeReleaseBuffer(Py_buffer* info); +static Py_ssize_t __Pyx_minusones[] = { -1, -1, -1, -1, -1, -1, -1, -1 }; +static Py_ssize_t __Pyx_zeros[] = { 0, 0, 0, 0, 0, 0, 0, 0 }; + +/* PyFunctionFastCall.proto */ +#if CYTHON_FAST_PYCALL +#define __Pyx_PyFunction_FastCall(func, args, nargs)\ + __Pyx_PyFunction_FastCallDict((func), (args), (nargs), NULL) +#if 1 || PY_VERSION_HEX < 0x030600B1 +static PyObject *__Pyx_PyFunction_FastCallDict(PyObject *func, PyObject **args, int nargs, PyObject *kwargs); +#else +#define __Pyx_PyFunction_FastCallDict(func, args, nargs, kwargs) _PyFunction_FastCallDict(func, args, nargs, kwargs) +#endif +#define __Pyx_BUILD_ASSERT_EXPR(cond)\ + (sizeof(char [1 - 2*!(cond)]) - 1) +#ifndef Py_MEMBER_SIZE +#define Py_MEMBER_SIZE(type, member) sizeof(((type *)0)->member) +#endif + static size_t __pyx_pyframe_localsplus_offset = 0; + #include "frameobject.h" + #define __Pxy_PyFrame_Initialize_Offsets()\ + ((void)__Pyx_BUILD_ASSERT_EXPR(sizeof(PyFrameObject) == offsetof(PyFrameObject, f_localsplus) + Py_MEMBER_SIZE(PyFrameObject, f_localsplus)),\ + (void)(__pyx_pyframe_localsplus_offset = ((size_t)PyFrame_Type.tp_basicsize) - Py_MEMBER_SIZE(PyFrameObject, f_localsplus))) + #define __Pyx_PyFrame_GetLocalsplus(frame)\ + (assert(__pyx_pyframe_localsplus_offset), (PyObject **)(((char *)(frame)) + __pyx_pyframe_localsplus_offset)) +#endif + +/* PyCFunctionFastCall.proto */ +#if CYTHON_FAST_PYCCALL +static CYTHON_INLINE PyObject *__Pyx_PyCFunction_FastCall(PyObject *func, PyObject **args, Py_ssize_t nargs); +#else +#define __Pyx_PyCFunction_FastCall(func, args, nargs) (assert(0), NULL) +#endif + +/* PyObjectCall.proto */ #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyObject_Call(PyObject *func, PyObject *arg, PyObject *kw); #else #define __Pyx_PyObject_Call(func, arg, kw) PyObject_Call(func, arg, kw) #endif -static CYTHON_INLINE void __Pyx_ErrRestore(PyObject *type, PyObject *value, PyObject *tb); -static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb); +/* PyThreadStateGet.proto */ +#if CYTHON_FAST_THREAD_STATE +#define __Pyx_PyThreadState_declare PyThreadState *__pyx_tstate; +#define __Pyx_PyThreadState_assign __pyx_tstate = __Pyx_PyThreadState_Current; +#define __Pyx_PyErr_Occurred() __pyx_tstate->curexc_type +#else +#define __Pyx_PyThreadState_declare +#define __Pyx_PyThreadState_assign +#define __Pyx_PyErr_Occurred() PyErr_Occurred() +#endif +/* PyErrFetchRestore.proto */ +#if CYTHON_FAST_THREAD_STATE +#define __Pyx_PyErr_Clear() __Pyx_ErrRestore(NULL, NULL, NULL) +#define __Pyx_ErrRestoreWithState(type, value, tb) __Pyx_ErrRestoreInState(PyThreadState_GET(), type, value, tb) +#define __Pyx_ErrFetchWithState(type, value, tb) __Pyx_ErrFetchInState(PyThreadState_GET(), type, value, tb) +#define __Pyx_ErrRestore(type, value, tb) __Pyx_ErrRestoreInState(__pyx_tstate, type, value, tb) +#define __Pyx_ErrFetch(type, value, tb) __Pyx_ErrFetchInState(__pyx_tstate, type, value, tb) +static CYTHON_INLINE void __Pyx_ErrRestoreInState(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb); +static CYTHON_INLINE void __Pyx_ErrFetchInState(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb); +#if CYTHON_COMPILING_IN_CPYTHON +#define __Pyx_PyErr_SetNone(exc) (Py_INCREF(exc), __Pyx_ErrRestore((exc), NULL, NULL)) +#else +#define __Pyx_PyErr_SetNone(exc) PyErr_SetNone(exc) +#endif +#else +#define __Pyx_PyErr_Clear() PyErr_Clear() +#define __Pyx_PyErr_SetNone(exc) PyErr_SetNone(exc) +#define __Pyx_ErrRestoreWithState(type, value, tb) PyErr_Restore(type, value, tb) +#define __Pyx_ErrFetchWithState(type, value, tb) PyErr_Fetch(type, value, tb) +#define __Pyx_ErrRestoreInState(tstate, type, value, tb) PyErr_Restore(type, value, tb) +#define __Pyx_ErrFetchInState(tstate, type, value, tb) PyErr_Fetch(type, value, tb) +#define __Pyx_ErrRestore(type, value, tb) PyErr_Restore(type, value, tb) +#define __Pyx_ErrFetch(type, value, tb) PyErr_Fetch(type, value, tb) +#endif + +/* RaiseException.proto */ static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause); +/* RaiseArgTupleInvalid.proto */ static void __Pyx_RaiseArgtupleInvalid(const char* func_name, int exact, Py_ssize_t num_min, Py_ssize_t num_max, Py_ssize_t num_found); +/* RaiseDoubleKeywords.proto */ static void __Pyx_RaiseDoubleKeywordsError(const char* func_name, PyObject* kw_name); -static int __Pyx_ParseOptionalKeywords(PyObject *kwds, PyObject **argnames[], \ - PyObject *kwds2, PyObject *values[], Py_ssize_t num_pos_args, \ +/* ParseKeywords.proto */ +static int __Pyx_ParseOptionalKeywords(PyObject *kwds, PyObject **argnames[],\ + PyObject *kwds2, PyObject *values[], Py_ssize_t num_pos_args,\ const char* function_name); -static CYTHON_INLINE int __Pyx_ArgTypeTest(PyObject *obj, PyTypeObject *type, int none_allowed, - const char *name, int exact); +/* ArgTypeTest.proto */ +#define __Pyx_ArgTypeTest(obj, type, none_allowed, name, exact)\ + ((likely((Py_TYPE(obj) == type) | (none_allowed && (obj == Py_None)))) ? 1 :\ + __Pyx__ArgTypeTest(obj, type, name, exact)) +static int __Pyx__ArgTypeTest(PyObject *obj, PyTypeObject *type, const char *name, int exact); +/* PyObjectCall2Args.proto */ +static CYTHON_UNUSED PyObject* __Pyx_PyObject_Call2Args(PyObject* function, PyObject* arg1, PyObject* arg2); + +/* PyObjectCallMethO.proto */ #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyObject_CallMethO(PyObject *func, PyObject *arg); #endif +/* PyObjectCallOneArg.proto */ static CYTHON_INLINE PyObject* __Pyx_PyObject_CallOneArg(PyObject *func, PyObject *arg); -static CYTHON_INLINE PyObject *__Pyx_GetModuleGlobalName(PyObject *name); +/* PyErrExceptionMatches.proto */ +#if CYTHON_FAST_THREAD_STATE +#define __Pyx_PyErr_ExceptionMatches(err) __Pyx_PyErr_ExceptionMatchesInState(__pyx_tstate, err) +static CYTHON_INLINE int __Pyx_PyErr_ExceptionMatchesInState(PyThreadState* tstate, PyObject* err); +#else +#define __Pyx_PyErr_ExceptionMatches(err) PyErr_ExceptionMatches(err) +#endif +/* GetAttr.proto */ +static CYTHON_INLINE PyObject *__Pyx_GetAttr(PyObject *, PyObject *); + +/* GetAttr3.proto */ +static CYTHON_INLINE PyObject *__Pyx_GetAttr3(PyObject *, PyObject *, PyObject *); + +/* GetModuleGlobalName.proto */ +#if CYTHON_USE_DICT_VERSIONS +#define __Pyx_GetModuleGlobalName(var, name) {\ + static PY_UINT64_T __pyx_dict_version = 0;\ + static PyObject *__pyx_dict_cached_value = NULL;\ + (var) = (likely(__pyx_dict_version == __PYX_GET_DICT_VERSION(__pyx_d))) ?\ + (likely(__pyx_dict_cached_value) ? __Pyx_NewRef(__pyx_dict_cached_value) : __Pyx_GetBuiltinName(name)) :\ + __Pyx__GetModuleGlobalName(name, &__pyx_dict_version, &__pyx_dict_cached_value);\ +} +#define __Pyx_GetModuleGlobalNameUncached(var, name) {\ + PY_UINT64_T __pyx_dict_version;\ + PyObject *__pyx_dict_cached_value;\ + (var) = __Pyx__GetModuleGlobalName(name, &__pyx_dict_version, &__pyx_dict_cached_value);\ +} +static PyObject *__Pyx__GetModuleGlobalName(PyObject *name, PY_UINT64_T *dict_version, PyObject **dict_cached_value); +#else +#define __Pyx_GetModuleGlobalName(var, name) (var) = __Pyx__GetModuleGlobalName(name) +#define __Pyx_GetModuleGlobalNameUncached(var, name) (var) = __Pyx__GetModuleGlobalName(name) +static CYTHON_INLINE PyObject *__Pyx__GetModuleGlobalName(PyObject *name); +#endif + +/* GetItemInt.proto */ +#define __Pyx_GetItemInt(o, i, type, is_signed, to_py_func, is_list, wraparound, boundscheck)\ + (__Pyx_fits_Py_ssize_t(i, type, is_signed) ?\ + __Pyx_GetItemInt_Fast(o, (Py_ssize_t)i, is_list, wraparound, boundscheck) :\ + (is_list ? (PyErr_SetString(PyExc_IndexError, "list index out of range"), (PyObject*)NULL) :\ + __Pyx_GetItemInt_Generic(o, to_py_func(i)))) +#define __Pyx_GetItemInt_List(o, i, type, is_signed, to_py_func, is_list, wraparound, boundscheck)\ + (__Pyx_fits_Py_ssize_t(i, type, is_signed) ?\ + __Pyx_GetItemInt_List_Fast(o, (Py_ssize_t)i, wraparound, boundscheck) :\ + (PyErr_SetString(PyExc_IndexError, "list index out of range"), (PyObject*)NULL)) +static CYTHON_INLINE PyObject *__Pyx_GetItemInt_List_Fast(PyObject *o, Py_ssize_t i, + int wraparound, int boundscheck); +#define __Pyx_GetItemInt_Tuple(o, i, type, is_signed, to_py_func, is_list, wraparound, boundscheck)\ + (__Pyx_fits_Py_ssize_t(i, type, is_signed) ?\ + __Pyx_GetItemInt_Tuple_Fast(o, (Py_ssize_t)i, wraparound, boundscheck) :\ + (PyErr_SetString(PyExc_IndexError, "tuple index out of range"), (PyObject*)NULL)) +static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Tuple_Fast(PyObject *o, Py_ssize_t i, + int wraparound, int boundscheck); +static PyObject *__Pyx_GetItemInt_Generic(PyObject *o, PyObject* j); +static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Fast(PyObject *o, Py_ssize_t i, + int is_list, int wraparound, int boundscheck); + +/* ObjectGetItem.proto */ +#if CYTHON_USE_TYPE_SLOTS +static CYTHON_INLINE PyObject *__Pyx_PyObject_GetItem(PyObject *obj, PyObject* key); +#else +#define __Pyx_PyObject_GetItem(obj, key) PyObject_GetItem(obj, key) +#endif + +/* ExtTypeTest.proto */ static CYTHON_INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type); +/* BufferFallbackError.proto */ static void __Pyx_RaiseBufferFallbackError(void); +/* RaiseTooManyValuesToUnpack.proto */ static CYTHON_INLINE void __Pyx_RaiseTooManyValuesError(Py_ssize_t expected); +/* RaiseNeedMoreValuesToUnpack.proto */ static CYTHON_INLINE void __Pyx_RaiseNeedMoreValuesError(Py_ssize_t index); +/* IterFinish.proto */ static CYTHON_INLINE int __Pyx_IterFinish(void); +/* UnpackItemEndCheck.proto */ static int __Pyx_IternextUnpackEndCheck(PyObject *retval, Py_ssize_t expected); -static CYTHON_INLINE int __Pyx_PyDict_Contains(PyObject* item, PyObject* dict, int eq) { +/* PyDictContains.proto */ +static CYTHON_INLINE int __Pyx_PyDict_ContainsTF(PyObject* item, PyObject* dict, int eq) { int result = PyDict_Contains(dict, item); return unlikely(result < 0) ? result : (result == (eq == Py_EQ)); } -#if PY_MAJOR_VERSION >= 3 -static PyObject *__Pyx_PyDict_GetItem(PyObject *d, PyObject* key) { - PyObject *value; - value = PyDict_GetItemWithError(d, key); - if (unlikely(!value)) { - if (!PyErr_Occurred()) { - PyObject* args = PyTuple_Pack(1, key); - if (likely(args)) - PyErr_SetObject(PyExc_KeyError, args); - Py_XDECREF(args); - } - return NULL; - } - Py_INCREF(value); - return value; -} +/* DictGetItem.proto */ +#if PY_MAJOR_VERSION >= 3 && !CYTHON_COMPILING_IN_PYPY +static PyObject *__Pyx_PyDict_GetItem(PyObject *d, PyObject* key); +#define __Pyx_PyObject_Dict_GetItem(obj, name)\ + (likely(PyDict_CheckExact(obj)) ?\ + __Pyx_PyDict_GetItem(obj, name) : PyObject_GetItem(obj, name)) #else - #define __Pyx_PyDict_GetItem(d, key) PyObject_GetItem(d, key) +#define __Pyx_PyDict_GetItem(d, key) PyObject_GetItem(d, key) +#define __Pyx_PyObject_Dict_GetItem(obj, name) PyObject_GetItem(obj, name) #endif -#if CYTHON_COMPILING_IN_CPYTHON -#define __Pyx_PyObject_DelAttrStr(o,n) __Pyx_PyObject_SetAttrStr(o,n,NULL) -static CYTHON_INLINE int __Pyx_PyObject_SetAttrStr(PyObject* obj, PyObject* attr_name, PyObject* value) { - PyTypeObject* tp = Py_TYPE(obj); - if (likely(tp->tp_setattro)) - return tp->tp_setattro(obj, attr_name, value); -#if PY_MAJOR_VERSION < 3 - if (likely(tp->tp_setattr)) - return tp->tp_setattr(obj, PyString_AS_STRING(attr_name), value); -#endif - return PyObject_SetAttr(obj, attr_name, value); -} +/* PyObjectSetAttrStr.proto */ +#if CYTHON_USE_TYPE_SLOTS +#define __Pyx_PyObject_DelAttrStr(o,n) __Pyx_PyObject_SetAttrStr(o, n, NULL) +static CYTHON_INLINE int __Pyx_PyObject_SetAttrStr(PyObject* obj, PyObject* attr_name, PyObject* value); #else #define __Pyx_PyObject_DelAttrStr(o,n) PyObject_DelAttr(o,n) #define __Pyx_PyObject_SetAttrStr(o,n,v) PyObject_SetAttr(o,n,v) #endif -#define __Pyx_GetItemInt(o, i, type, is_signed, to_py_func, is_list, wraparound, boundscheck) \ - (__Pyx_fits_Py_ssize_t(i, type, is_signed) ? \ - __Pyx_GetItemInt_Fast(o, (Py_ssize_t)i, is_list, wraparound, boundscheck) : \ - (is_list ? (PyErr_SetString(PyExc_IndexError, "list index out of range"), (PyObject*)NULL) : \ - __Pyx_GetItemInt_Generic(o, to_py_func(i)))) -#define __Pyx_GetItemInt_List(o, i, type, is_signed, to_py_func, is_list, wraparound, boundscheck) \ - (__Pyx_fits_Py_ssize_t(i, type, is_signed) ? \ - __Pyx_GetItemInt_List_Fast(o, (Py_ssize_t)i, wraparound, boundscheck) : \ - (PyErr_SetString(PyExc_IndexError, "list index out of range"), (PyObject*)NULL)) -static CYTHON_INLINE PyObject *__Pyx_GetItemInt_List_Fast(PyObject *o, Py_ssize_t i, - int wraparound, int boundscheck); -#define __Pyx_GetItemInt_Tuple(o, i, type, is_signed, to_py_func, is_list, wraparound, boundscheck) \ - (__Pyx_fits_Py_ssize_t(i, type, is_signed) ? \ - __Pyx_GetItemInt_Tuple_Fast(o, (Py_ssize_t)i, wraparound, boundscheck) : \ - (PyErr_SetString(PyExc_IndexError, "tuple index out of range"), (PyObject*)NULL)) -static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Tuple_Fast(PyObject *o, Py_ssize_t i, - int wraparound, int boundscheck); -static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Generic(PyObject *o, PyObject* j); -static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Fast(PyObject *o, Py_ssize_t i, - int is_list, int wraparound, int boundscheck); +/* PySequenceContains.proto */ +static CYTHON_INLINE int __Pyx_PySequence_ContainsTF(PyObject* item, PyObject* seq, int eq) { + int result = PySequence_Contains(seq, item); + return unlikely(result < 0) ? result : (result == (eq == Py_EQ)); +} +/* SetItemInt.proto */ +#define __Pyx_SetItemInt(o, i, v, type, is_signed, to_py_func, is_list, wraparound, boundscheck)\ + (__Pyx_fits_Py_ssize_t(i, type, is_signed) ?\ + __Pyx_SetItemInt_Fast(o, (Py_ssize_t)i, v, is_list, wraparound, boundscheck) :\ + (is_list ? (PyErr_SetString(PyExc_IndexError, "list assignment index out of range"), -1) :\ + __Pyx_SetItemInt_Generic(o, to_py_func(i), v))) +static int __Pyx_SetItemInt_Generic(PyObject *o, PyObject *j, PyObject *v); +static CYTHON_INLINE int __Pyx_SetItemInt_Fast(PyObject *o, Py_ssize_t i, PyObject *v, + int is_list, int wraparound, int boundscheck); + +/* PyFloatBinop.proto */ +#if !CYTHON_COMPILING_IN_PYPY +static PyObject* __Pyx_PyFloat_DivideCObj(PyObject *op1, PyObject *op2, double floatval, int inplace); +#else +#define __Pyx_PyFloat_DivideCObj(op1, op2, floatval, inplace)\ + ((inplace ? __Pyx_PyNumber_InPlaceDivide(op1, op2) : __Pyx_PyNumber_Divide(op1, op2))) + #endif + +/* Import.proto */ +static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level); + +/* ImportFrom.proto */ +static PyObject* __Pyx_ImportFrom(PyObject* module, PyObject* name); + +/* HasAttr.proto */ +static CYTHON_INLINE int __Pyx_HasAttr(PyObject *, PyObject *); + +/* RaiseNoneIterError.proto */ static CYTHON_INLINE void __Pyx_RaiseNoneNotIterableError(void); +/* GetTopmostException.proto */ +#if CYTHON_USE_EXC_INFO_STACK +static _PyErr_StackItem * __Pyx_PyErr_GetTopmostException(PyThreadState *tstate); +#endif + +/* SaveResetException.proto */ +#if CYTHON_FAST_THREAD_STATE +#define __Pyx_ExceptionSave(type, value, tb) __Pyx__ExceptionSave(__pyx_tstate, type, value, tb) +static CYTHON_INLINE void __Pyx__ExceptionSave(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb); +#define __Pyx_ExceptionReset(type, value, tb) __Pyx__ExceptionReset(__pyx_tstate, type, value, tb) +static CYTHON_INLINE void __Pyx__ExceptionReset(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb); +#else +#define __Pyx_ExceptionSave(type, value, tb) PyErr_GetExcInfo(type, value, tb) +#define __Pyx_ExceptionReset(type, value, tb) PyErr_SetExcInfo(type, value, tb) +#endif + +/* GetException.proto */ +#if CYTHON_FAST_THREAD_STATE +#define __Pyx_GetException(type, value, tb) __Pyx__GetException(__pyx_tstate, type, value, tb) +static int __Pyx__GetException(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb); +#else +static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb); +#endif + +/* CallNextTpTraverse.proto */ static int __Pyx_call_next_tp_traverse(PyObject* obj, visitproc v, void *a, traverseproc current_tp_traverse); +/* CallNextTpClear.proto */ static void __Pyx_call_next_tp_clear(PyObject* obj, inquiry current_tp_dealloc); +/* PyObject_GenericGetAttrNoDict.proto */ +#if CYTHON_USE_TYPE_SLOTS && CYTHON_USE_PYTYPE_LOOKUP && PY_VERSION_HEX < 0x03070000 +static CYTHON_INLINE PyObject* __Pyx_PyObject_GenericGetAttrNoDict(PyObject* obj, PyObject* attr_name); +#else +#define __Pyx_PyObject_GenericGetAttrNoDict PyObject_GenericGetAttr +#endif + +/* PyObject_GenericGetAttr.proto */ +#if CYTHON_USE_TYPE_SLOTS && CYTHON_USE_PYTYPE_LOOKUP && PY_VERSION_HEX < 0x03070000 +static PyObject* __Pyx_PyObject_GenericGetAttr(PyObject* obj, PyObject* attr_name); +#else +#define __Pyx_PyObject_GenericGetAttr PyObject_GenericGetAttr +#endif + +/* SetVTable.proto */ static int __Pyx_SetVtable(PyObject *dict, void *vtable); +/* SetupReduce.proto */ +static int __Pyx_setup_reduce(PyObject* type_obj); + +/* TypeImport.proto */ +#ifndef __PYX_HAVE_RT_ImportType_proto +#define __PYX_HAVE_RT_ImportType_proto +enum __Pyx_ImportType_CheckSize { + __Pyx_ImportType_CheckSize_Error = 0, + __Pyx_ImportType_CheckSize_Warn = 1, + __Pyx_ImportType_CheckSize_Ignore = 2 +}; +static PyTypeObject *__Pyx_ImportType(PyObject* module, const char *module_name, const char *class_name, size_t size, enum __Pyx_ImportType_CheckSize check_size); +#endif + +/* CLineInTraceback.proto */ +#ifdef CYTHON_CLINE_IN_TRACEBACK +#define __Pyx_CLineForTraceback(tstate, c_line) (((CYTHON_CLINE_IN_TRACEBACK)) ? c_line : 0) +#else +static int __Pyx_CLineForTraceback(PyThreadState *tstate, int c_line); +#endif + +/* CodeObjectCache.proto */ typedef struct { - int code_line; PyCodeObject* code_object; + int code_line; } __Pyx_CodeObjectCacheEntry; struct __Pyx_CodeObjectCache { int count; @@ -1258,9 +1874,14 @@ static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int co static PyCodeObject *__pyx_find_code_object(int code_line); static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object); +/* AddTraceback.proto */ static void __Pyx_AddTraceback(const char *funcname, int c_line, int py_line, const char *filename); +/* CIntToPy.proto */ +static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value); + +/* BufferStructDeclare.proto */ typedef struct { Py_ssize_t shape, strides, suboffsets; } __Pyx_Buf_DimInfo; @@ -1283,21 +1904,13 @@ typedef struct { #endif -static Py_ssize_t __Pyx_zeros[] = {0, 0, 0, 0, 0, 0, 0, 0}; -static Py_ssize_t __Pyx_minusones[] = {-1, -1, -1, -1, -1, -1, -1, -1}; - -static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level); - -static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *); - -static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *); - -static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value); - +/* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value); +/* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_Py_intptr_t(Py_intptr_t value); +/* RealImag.proto */ #if CYTHON_CCOMPLEX #ifdef __cplusplus #define __Pyx_CREAL(z) ((z).real()) @@ -1310,7 +1923,8 @@ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_Py_intptr_t(Py_intptr_t value); #define __Pyx_CREAL(z) ((z).real) #define __Pyx_CIMAG(z) ((z).imag) #endif -#if (defined(_WIN32) || defined(__clang__)) && defined(__cplusplus) && CYTHON_CCOMPLEX +#if defined(__cplusplus) && CYTHON_CCOMPLEX\ + && (defined(_WIN32) || defined(__clang__) || (defined(__GNUC__) && (__GNUC__ >= 5 || __GNUC__ == 4 && __GNUC_MINOR__ >= 4 )) || __cplusplus >= 201103) #define __Pyx_SET_CREAL(z,x) ((z).real(x)) #define __Pyx_SET_CIMAG(z,y) ((z).imag(y)) #else @@ -1318,98 +1932,108 @@ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_Py_intptr_t(Py_intptr_t value); #define __Pyx_SET_CIMAG(z,y) __Pyx_CIMAG(z) = (y) #endif -static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float, float); - +/* Arithmetic.proto */ #if CYTHON_CCOMPLEX - #define __Pyx_c_eqf(a, b) ((a)==(b)) - #define __Pyx_c_sumf(a, b) ((a)+(b)) - #define __Pyx_c_difff(a, b) ((a)-(b)) - #define __Pyx_c_prodf(a, b) ((a)*(b)) - #define __Pyx_c_quotf(a, b) ((a)/(b)) - #define __Pyx_c_negf(a) (-(a)) + #define __Pyx_c_eq_float(a, b) ((a)==(b)) + #define __Pyx_c_sum_float(a, b) ((a)+(b)) + #define __Pyx_c_diff_float(a, b) ((a)-(b)) + #define __Pyx_c_prod_float(a, b) ((a)*(b)) + #define __Pyx_c_quot_float(a, b) ((a)/(b)) + #define __Pyx_c_neg_float(a) (-(a)) #ifdef __cplusplus - #define __Pyx_c_is_zerof(z) ((z)==(float)0) - #define __Pyx_c_conjf(z) (::std::conj(z)) + #define __Pyx_c_is_zero_float(z) ((z)==(float)0) + #define __Pyx_c_conj_float(z) (::std::conj(z)) #if 1 - #define __Pyx_c_absf(z) (::std::abs(z)) - #define __Pyx_c_powf(a, b) (::std::pow(a, b)) + #define __Pyx_c_abs_float(z) (::std::abs(z)) + #define __Pyx_c_pow_float(a, b) (::std::pow(a, b)) #endif #else - #define __Pyx_c_is_zerof(z) ((z)==0) - #define __Pyx_c_conjf(z) (conjf(z)) + #define __Pyx_c_is_zero_float(z) ((z)==0) + #define __Pyx_c_conj_float(z) (conjf(z)) #if 1 - #define __Pyx_c_absf(z) (cabsf(z)) - #define __Pyx_c_powf(a, b) (cpowf(a, b)) + #define __Pyx_c_abs_float(z) (cabsf(z)) + #define __Pyx_c_pow_float(a, b) (cpowf(a, b)) #endif #endif #else - static CYTHON_INLINE int __Pyx_c_eqf(__pyx_t_float_complex, __pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sumf(__pyx_t_float_complex, __pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_difff(__pyx_t_float_complex, __pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_prodf(__pyx_t_float_complex, __pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quotf(__pyx_t_float_complex, __pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_negf(__pyx_t_float_complex); - static CYTHON_INLINE int __Pyx_c_is_zerof(__pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conjf(__pyx_t_float_complex); + static CYTHON_INLINE int __Pyx_c_eq_float(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sum_float(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_diff_float(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_prod_float(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quot_float(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_neg_float(__pyx_t_float_complex); + static CYTHON_INLINE int __Pyx_c_is_zero_float(__pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conj_float(__pyx_t_float_complex); #if 1 - static CYTHON_INLINE float __Pyx_c_absf(__pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_powf(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE float __Pyx_c_abs_float(__pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_pow_float(__pyx_t_float_complex, __pyx_t_float_complex); #endif #endif -static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double, double); - +/* Arithmetic.proto */ #if CYTHON_CCOMPLEX - #define __Pyx_c_eq(a, b) ((a)==(b)) - #define __Pyx_c_sum(a, b) ((a)+(b)) - #define __Pyx_c_diff(a, b) ((a)-(b)) - #define __Pyx_c_prod(a, b) ((a)*(b)) - #define __Pyx_c_quot(a, b) ((a)/(b)) - #define __Pyx_c_neg(a) (-(a)) + #define __Pyx_c_eq_double(a, b) ((a)==(b)) + #define __Pyx_c_sum_double(a, b) ((a)+(b)) + #define __Pyx_c_diff_double(a, b) ((a)-(b)) + #define __Pyx_c_prod_double(a, b) ((a)*(b)) + #define __Pyx_c_quot_double(a, b) ((a)/(b)) + #define __Pyx_c_neg_double(a) (-(a)) #ifdef __cplusplus - #define __Pyx_c_is_zero(z) ((z)==(double)0) - #define __Pyx_c_conj(z) (::std::conj(z)) + #define __Pyx_c_is_zero_double(z) ((z)==(double)0) + #define __Pyx_c_conj_double(z) (::std::conj(z)) #if 1 - #define __Pyx_c_abs(z) (::std::abs(z)) - #define __Pyx_c_pow(a, b) (::std::pow(a, b)) + #define __Pyx_c_abs_double(z) (::std::abs(z)) + #define __Pyx_c_pow_double(a, b) (::std::pow(a, b)) #endif #else - #define __Pyx_c_is_zero(z) ((z)==0) - #define __Pyx_c_conj(z) (conj(z)) + #define __Pyx_c_is_zero_double(z) ((z)==0) + #define __Pyx_c_conj_double(z) (conj(z)) #if 1 - #define __Pyx_c_abs(z) (cabs(z)) - #define __Pyx_c_pow(a, b) (cpow(a, b)) + #define __Pyx_c_abs_double(z) (cabs(z)) + #define __Pyx_c_pow_double(a, b) (cpow(a, b)) #endif #endif #else - static CYTHON_INLINE int __Pyx_c_eq(__pyx_t_double_complex, __pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum(__pyx_t_double_complex, __pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff(__pyx_t_double_complex, __pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_prod(__pyx_t_double_complex, __pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot(__pyx_t_double_complex, __pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg(__pyx_t_double_complex); - static CYTHON_INLINE int __Pyx_c_is_zero(__pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj(__pyx_t_double_complex); + static CYTHON_INLINE int __Pyx_c_eq_double(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum_double(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff_double(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_prod_double(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot_double(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg_double(__pyx_t_double_complex); + static CYTHON_INLINE int __Pyx_c_is_zero_double(__pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj_double(__pyx_t_double_complex); #if 1 - static CYTHON_INLINE double __Pyx_c_abs(__pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE double __Pyx_c_abs_double(__pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow_double(__pyx_t_double_complex, __pyx_t_double_complex); #endif #endif +/* CIntToPy.proto */ +static CYTHON_INLINE PyObject* __Pyx_PyInt_From_enum__NPY_TYPES(enum NPY_TYPES value); + +/* CIntFromPy.proto */ +static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *); + +/* CIntFromPy.proto */ +static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *); + +/* FastTypeChecks.proto */ +#if CYTHON_COMPILING_IN_CPYTHON +#define __Pyx_TypeCheck(obj, type) __Pyx_IsSubtype(Py_TYPE(obj), (PyTypeObject *)type) +static CYTHON_INLINE int __Pyx_IsSubtype(PyTypeObject *a, PyTypeObject *b); +static CYTHON_INLINE int __Pyx_PyErr_GivenExceptionMatches(PyObject *err, PyObject *type); +static CYTHON_INLINE int __Pyx_PyErr_GivenExceptionMatches2(PyObject *err, PyObject *type1, PyObject *type2); +#else +#define __Pyx_TypeCheck(obj, type) PyObject_TypeCheck(obj, (PyTypeObject *)type) +#define __Pyx_PyErr_GivenExceptionMatches(err, type) PyErr_GivenExceptionMatches(err, type) +#define __Pyx_PyErr_GivenExceptionMatches2(err, type1, type2) (PyErr_GivenExceptionMatches(err, type1) || PyErr_GivenExceptionMatches(err, type2)) +#endif +#define __Pyx_PyException_Check(obj) __Pyx_TypeCheck(obj, PyExc_Exception) + +/* CheckBinaryVersion.proto */ static int __Pyx_check_binary_version(void); -#if !defined(__Pyx_PyIdentifier_FromString) -#if PY_MAJOR_VERSION < 3 - #define __Pyx_PyIdentifier_FromString(s) PyString_FromString(s) -#else - #define __Pyx_PyIdentifier_FromString(s) PyUnicode_FromString(s) -#endif -#endif - -static PyObject *__Pyx_ImportModule(const char *name); - -static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name, size_t size, int strict); - +/* InitStrings.proto */ static int __Pyx_InitStrings(__Pyx_StringTabEntry *t); static PyObject *__pyx_f_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_f_a(CYTHON_UNUSED struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_self, CYTHON_UNUSED int __pyx_v_k, CYTHON_UNUSED PyArrayObject *__pyx_v_m, CYTHON_UNUSED PyArrayObject *__pyx_v_A, int __pyx_skip_dispatch); /* proto*/ @@ -1446,23 +2070,26 @@ static PyObject *__pyx_f_3GPy_6models_18state_space_cython_22AQcompute_batch_Cyt static PyObject *__pyx_f_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_dAk(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_v_k, int __pyx_skip_dispatch); /* proto*/ static PyObject *__pyx_f_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_dQk(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_v_k, int __pyx_skip_dispatch); /* proto*/ static PyObject *__pyx_f_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_Q_srk(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_v_k, int __pyx_skip_dispatch); /* proto*/ +static PyObject *__pyx_f_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_Q_inverse(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_v_k, int __pyx_skip_dispatch, struct __pyx_opt_args_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_Q_inverse *__pyx_optional_args); /* proto*/ /* Module declarations from 'cpython.buffer' */ -/* Module declarations from 'cpython.ref' */ - /* Module declarations from 'libc.string' */ /* Module declarations from 'libc.stdio' */ -/* Module declarations from 'cpython.object' */ - /* Module declarations from '__builtin__' */ /* Module declarations from 'cpython.type' */ static PyTypeObject *__pyx_ptype_7cpython_4type_type = 0; -/* Module declarations from 'libc.stdlib' */ +/* Module declarations from 'cpython' */ + +/* Module declarations from 'cpython.object' */ + +/* Module declarations from 'cpython.ref' */ + +/* Module declarations from 'cpython.mem' */ /* Module declarations from 'numpy' */ @@ -1484,9 +2111,17 @@ static PyTypeObject *__pyx_ptype_3GPy_6models_18state_space_cython_Std_Measureme static PyTypeObject *__pyx_ptype_3GPy_6models_18state_space_cython_Q_handling_Cython = 0; static PyTypeObject *__pyx_ptype_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython = 0; static PyTypeObject *__pyx_ptype_3GPy_6models_18state_space_cython_AQcompute_batch_Cython = 0; +static PyObject *__pyx_f_3GPy_6models_18state_space_cython___pyx_unpickle_Dynamic_Callables_Cython__set_state(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *, PyObject *); /*proto*/ +static PyObject *__pyx_f_3GPy_6models_18state_space_cython___pyx_unpickle_Measurement_Callables_Cython__set_state(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *, PyObject *); /*proto*/ +static PyObject *__pyx_f_3GPy_6models_18state_space_cython___pyx_unpickle_R_handling_Cython__set_state(struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython *, PyObject *); /*proto*/ +static PyObject *__pyx_f_3GPy_6models_18state_space_cython___pyx_unpickle_Std_Measurement_Callables_Cython__set_state(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *, PyObject *); /*proto*/ +static PyObject *__pyx_f_3GPy_6models_18state_space_cython___pyx_unpickle_Q_handling_Cython__set_state(struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython *, PyObject *); /*proto*/ +static PyObject *__pyx_f_3GPy_6models_18state_space_cython___pyx_unpickle_Std_Dynamic_Callables_Cython__set_state(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *, PyObject *); /*proto*/ +static PyObject *__pyx_f_3GPy_6models_18state_space_cython___pyx_unpickle_AQcompute_batch_Cython__set_state(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *, PyObject *); /*proto*/ static __Pyx_TypeInfo __Pyx_TypeInfo_nn___pyx_t_3GPy_6models_18state_space_cython_DTYPE_t = { "DTYPE_t", NULL, sizeof(__pyx_t_3GPy_6models_18state_space_cython_DTYPE_t), { 0 }, 0, 'R', 0, 0 }; static __Pyx_TypeInfo __Pyx_TypeInfo_nn___pyx_t_3GPy_6models_18state_space_cython_DTYPE_int_t = { "DTYPE_int_t", NULL, sizeof(__pyx_t_3GPy_6models_18state_space_cython_DTYPE_int_t), { 0 }, 0, IS_UNSIGNED(__pyx_t_3GPy_6models_18state_space_cython_DTYPE_int_t) ? 'U' : 'I', IS_UNSIGNED(__pyx_t_3GPy_6models_18state_space_cython_DTYPE_int_t), 0 }; #define __Pyx_MODULE_NAME "GPy.models.state_space_cython" +extern int __pyx_module_is_main_GPy__models__state_space_cython; int __pyx_module_is_main_GPy__models__state_space_cython = 0; /* Implementation of 'GPy.models.state_space_cython' */ @@ -1495,272 +2130,264 @@ static PyObject *__pyx_builtin_ValueError; static PyObject *__pyx_builtin_super; static PyObject *__pyx_builtin_range; static PyObject *__pyx_builtin_RuntimeError; -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_f_a(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_k, PyArrayObject *__pyx_v_m, PyArrayObject *__pyx_v_A); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_2Ak(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_k, PyArrayObject *__pyx_v_m, PyArrayObject *__pyx_v_P); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_4Qk(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_6Q_srk(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_8dAk(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_10dQk(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_12reset(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_compute_derivatives); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_f_h(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_self, int __pyx_v_k, PyArrayObject *__pyx_v_m_pred, PyArrayObject *__pyx_v_Hk); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_2Hk(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_self, int __pyx_v_k, PyArrayObject *__pyx_v_m_pred, PyArrayObject *__pyx_v_P_pred); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_4Rk(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_6R_isrk(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_8dHk(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_10dRk(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_12reset(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_self, PyObject *__pyx_v_compute_derivatives); /* proto */ -static int __pyx_pf_3GPy_6models_18state_space_cython_17R_handling_Cython___init__(struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython *__pyx_v_self, PyArrayObject *__pyx_v_R, PyArrayObject *__pyx_v_index, int __pyx_v_R_time_var_index, int __pyx_v_p_unique_R_number, PyArrayObject *__pyx_v_dR); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_17R_handling_Cython_2Rk(struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_17R_handling_Cython_4dRk(struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_17R_handling_Cython_6R_isrk(struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ -static int __pyx_pf_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython___init__(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *__pyx_v_self, PyArrayObject *__pyx_v_H, int __pyx_v_H_time_var_index, PyArrayObject *__pyx_v_R, PyArrayObject *__pyx_v_index, int __pyx_v_R_time_var_index, int __pyx_v_unique_R_number, PyArrayObject *__pyx_v_dH, PyArrayObject *__pyx_v_dR); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_2f_h(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *__pyx_v_self, int __pyx_v_k, PyArrayObject *__pyx_v_m, PyArrayObject *__pyx_v_H); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_4Hk(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *__pyx_v_self, int __pyx_v_k, PyArrayObject *__pyx_v_m_pred, PyArrayObject *__pyx_v_P_pred); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_6dHk(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ -static int __pyx_pf_3GPy_6models_18state_space_cython_17Q_handling_Cython___init__(struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython *__pyx_v_self, PyArrayObject *__pyx_v_Q, PyArrayObject *__pyx_v_index, int __pyx_v_Q_time_var_index, int __pyx_v_p_unique_Q_number, PyArrayObject *__pyx_v_dQ); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_17Q_handling_Cython_2Qk(struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_17Q_handling_Cython_4dQk(struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_17Q_handling_Cython_6Q_srk(struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ -static int __pyx_pf_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython___init__(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *__pyx_v_self, PyArrayObject *__pyx_v_A, int __pyx_v_A_time_var_index, PyArrayObject *__pyx_v_Q, PyArrayObject *__pyx_v_index, int __pyx_v_Q_time_var_index, int __pyx_v_unique_Q_number, PyArrayObject *__pyx_v_dA, PyArrayObject *__pyx_v_dQ); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_2f_a(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_k, PyArrayObject *__pyx_v_m, PyArrayObject *__pyx_v_A); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_4Ak(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_k, PyArrayObject *__pyx_v_m_pred, PyArrayObject *__pyx_v_P_pred); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_6dAk(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_8reset(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_compute_derivatives); /* proto */ -static int __pyx_pf_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython___init__(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, PyArrayObject *__pyx_v_As, PyArrayObject *__pyx_v_Qs, PyArrayObject *__pyx_v_reconstruct_indices, PyArrayObject *__pyx_v_dAs, PyArrayObject *__pyx_v_dQs); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_2f_a(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_v_k, PyArrayObject *__pyx_v_m, PyArrayObject *__pyx_v_A); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_4reset(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_v_compute_derivatives); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_6Ak(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_v_k, PyArrayObject *__pyx_v_m, PyArrayObject *__pyx_v_P); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_8Qk(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_10dAk(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_12dQk(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_14Q_srk(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython__kalman_prediction_step_SVD_Cython(CYTHON_UNUSED PyObject *__pyx_self, long __pyx_v_k, PyArrayObject *__pyx_v_p_m, PyObject *__pyx_v_p_P, struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_p_dynamic_callables, int __pyx_v_calc_grad_log_likelihood, PyArrayObject *__pyx_v_p_dm, PyArrayObject *__pyx_v_p_dP); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_2_kalman_update_step_SVD_Cython(CYTHON_UNUSED PyObject *__pyx_self, long __pyx_v_k, PyArrayObject *__pyx_v_p_m, PyObject *__pyx_v_p_P, struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_p_measurement_callables, PyArrayObject *__pyx_v_measurement, int __pyx_v_calc_log_likelihood, int __pyx_v_calc_grad_log_likelihood, PyArrayObject *__pyx_v_p_dm, PyArrayObject *__pyx_v_p_dP); /* proto */ -static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_4_cont_discr_kalman_filter_raw_Cython(CYTHON_UNUSED PyObject *__pyx_self, int __pyx_v_state_dim, struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_p_dynamic_callables, struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_p_measurement_callables, CYTHON_UNUSED PyObject *__pyx_v_X, PyObject *__pyx_v_Y, PyArrayObject *__pyx_v_m_init, PyArrayObject *__pyx_v_P_init, CYTHON_UNUSED PyObject *__pyx_v_p_kalman_filter_type, int __pyx_v_calc_log_likelihood, int __pyx_v_calc_grad_log_likelihood, int __pyx_v_grad_params_no, PyArrayObject *__pyx_v_dm_init, PyArrayObject *__pyx_v_dP_init); /* proto */ -static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, Py_buffer *__pyx_v_info, int __pyx_v_flags); /* proto */ -static void __pyx_pf_5numpy_7ndarray_2__releasebuffer__(PyArrayObject *__pyx_v_self, Py_buffer *__pyx_v_info); /* proto */ -static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ -static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_Measurement_Callables_Cython(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ -static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_R_handling_Cython(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ -static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ -static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_Q_handling_Cython(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ -static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ -static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_AQcompute_batch_Cython(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ -static char __pyx_k_A[] = "A"; -static char __pyx_k_B[] = "B"; -static char __pyx_k_H[] = "H"; -static char __pyx_k_I[] = "I"; -static char __pyx_k_K[] = "K"; -static char __pyx_k_L[] = "L"; -static char __pyx_k_M[] = "M"; -static char __pyx_k_O[] = "O"; -static char __pyx_k_P[] = "P"; -static char __pyx_k_Q[] = "Q"; -static char __pyx_k_R[] = "R"; -static char __pyx_k_S[] = "S"; -static char __pyx_k_T[] = "T"; -static char __pyx_k_U[] = "U"; -static char __pyx_k_X[] = "X"; -static char __pyx_k_Y[] = "Y"; -static char __pyx_k_b[] = "b"; -static char __pyx_k_d[] = "d"; -static char __pyx_k_f[] = "f"; -static char __pyx_k_g[] = "g"; -static char __pyx_k_h[] = "h"; -static char __pyx_k_i[] = "i"; -static char __pyx_k_j[] = "j"; -static char __pyx_k_k[] = "k"; -static char __pyx_k_l[] = "l"; -static char __pyx_k_m[] = "m"; -static char __pyx_k_q[] = "q"; -static char __pyx_k_v[] = "v"; -static char __pyx_k_Ak[] = "Ak"; -static char __pyx_k_As[] = "As"; -static char __pyx_k_Hk[] = "Hk"; -static char __pyx_k_Qk[] = "Qk"; -static char __pyx_k_Qs[] = "Qs"; -static char __pyx_k_Rk[] = "Rk"; -static char __pyx_k_Vh[] = "Vh"; -static char __pyx_k_Zd[] = "Zd"; -static char __pyx_k_Zf[] = "Zf"; -static char __pyx_k_Zg[] = "Zg"; -static char __pyx_k_dA[] = "dA"; -static char __pyx_k_dH[] = "dH"; -static char __pyx_k_dK[] = "dK"; -static char __pyx_k_dQ[] = "dQ"; -static char __pyx_k_dR[] = "dR"; -static char __pyx_k_dS[] = "dS"; -static char __pyx_k_dv[] = "dv"; -static char __pyx_k_np[] = "np"; -static char __pyx_k_pi[] = "pi"; -static char __pyx_k_sp[] = "sp"; -static char __pyx_k_all[] = "all"; -static char __pyx_k_any[] = "any"; -static char __pyx_k_dAk[] = "dAk"; -static char __pyx_k_dAs[] = "dAs"; -static char __pyx_k_dHk[] = "dHk"; -static char __pyx_k_dQk[] = "dQk"; -static char __pyx_k_dQs[] = "dQs"; -static char __pyx_k_dRk[] = "dRk"; -static char __pyx_k_dot[] = "dot"; -static char __pyx_k_f_a[] = "f_a"; -static char __pyx_k_f_h[] = "f_h"; -static char __pyx_k_log[] = "log"; -static char __pyx_k_p_P[] = "p_P"; -static char __pyx_k_p_m[] = "p_m"; -static char __pyx_k_res[] = "res"; -static char __pyx_k_ret[] = "ret"; -static char __pyx_k_sum[] = "sum"; -static char __pyx_k_svd[] = "svd"; -static char __pyx_k_Q_sr[] = "Q_sr"; -static char __pyx_k_axis[] = "axis"; -static char __pyx_k_diag[] = "diag"; -static char __pyx_k_init[] = "__init__"; -static char __pyx_k_main[] = "__main__"; -static char __pyx_k_p_dP[] = "p_dP"; -static char __pyx_k_p_dm[] = "p_dm"; -static char __pyx_k_sqrt[] = "sqrt"; -static char __pyx_k_test[] = "__test__"; -static char __pyx_k_tmp1[] = "tmp1"; -static char __pyx_k_tmp2[] = "tmp2"; -static char __pyx_k_tmp3[] = "tmp3"; -static char __pyx_k_tmp5[] = "tmp5"; -static char __pyx_k_DTYPE[] = "DTYPE"; -static char __pyx_k_P_upd[] = "P_upd"; -static char __pyx_k_Q_srk[] = "Q_srk"; -static char __pyx_k_R_isr[] = "R_isr"; -static char __pyx_k_S_new[] = "S_new"; -static char __pyx_k_S_old[] = "S_old"; -static char __pyx_k_S_svd[] = "S_svd"; -static char __pyx_k_S_upd[] = "S_upd"; -static char __pyx_k_U_upd[] = "U_upd"; -static char __pyx_k_V_new[] = "V_new"; -static char __pyx_k_V_old[] = "V_old"; -static char __pyx_k_dtype[] = "dtype"; -static char __pyx_k_empty[] = "empty"; -static char __pyx_k_index[] = "index"; -static char __pyx_k_int64[] = "int64"; -static char __pyx_k_isnan[] = "isnan"; -static char __pyx_k_m_upd[] = "m_upd"; -static char __pyx_k_numpy[] = "numpy"; -static char __pyx_k_param[] = "param"; -static char __pyx_k_range[] = "range"; -static char __pyx_k_reset[] = "reset"; -static char __pyx_k_scipy[] = "scipy"; -static char __pyx_k_shape[] = "shape"; -static char __pyx_k_super[] = "super"; -static char __pyx_k_zeros[] = "zeros"; -static char __pyx_k_P_init[] = "P_init"; -static char __pyx_k_P_pred[] = "P_pred"; -static char __pyx_k_R_isrk[] = "R_isrk"; -static char __pyx_k_S_pred[] = "S_pred"; -static char __pyx_k_V_pred[] = "V_pred"; -static char __pyx_k_dP_upd[] = "dP_upd"; -static char __pyx_k_dm_upd[] = "dm_upd"; -static char __pyx_k_import[] = "__import__"; -static char __pyx_k_linalg[] = "linalg"; -static char __pyx_k_m_init[] = "m_init"; -static char __pyx_k_m_pred[] = "m_pred"; -static char __pyx_k_nbytes[] = "nbytes"; -static char __pyx_k_unique[] = "unique"; -static char __pyx_k_vstack[] = "vstack"; -static char __pyx_k_dP_init[] = "dP_init"; -static char __pyx_k_dP_pred[] = "dP_pred"; -static char __pyx_k_dm_init[] = "dm_init"; -static char __pyx_k_dm_pred[] = "dm_pred"; -static char __pyx_k_float64[] = "float64"; -static char __pyx_k_regular[] = "regular"; -static char __pyx_k_Prev_cov[] = "Prev_cov"; -static char __pyx_k_steps_no[] = "steps_no"; -static char __pyx_k_DTYPE_int[] = "DTYPE_int"; -static char __pyx_k_prev_mean[] = "prev_mean"; -static char __pyx_k_state_dim[] = "state_dim"; -static char __pyx_k_ValueError[] = "ValueError"; -static char __pyx_k_compute_uv[] = "compute_uv"; -static char __pyx_k_pyx_vtable[] = "__pyx_vtable__"; -static char __pyx_k_svd_1_matr[] = "svd_1_matr"; -static char __pyx_k_svd_2_matr[] = "svd_2_matr"; -static char __pyx_k_measurement[] = "measurement"; -static char __pyx_k_overwrite_a[] = "overwrite_a"; -static char __pyx_k_RuntimeError[] = "RuntimeError"; -static char __pyx_k_check_finite[] = "check_finite"; -static char __pyx_k_k_measurment[] = "k_measurment"; -static char __pyx_k_param_number[] = "param_number"; -static char __pyx_k_dA_all_params[] = "dA_all_params"; -static char __pyx_k_dH_all_params[] = "dH_all_params"; -static char __pyx_k_dQ_all_params[] = "dQ_all_params"; -static char __pyx_k_dR_all_params[] = "dR_all_params"; -static char __pyx_k_full_matrices[] = "full_matrices"; -static char __pyx_k_NotImplemented[] = "NotImplemented"; -static char __pyx_k_grad_params_no[] = "grad_params_no"; -static char __pyx_k_log_likelihood[] = "log_likelihood"; -static char __pyx_k_time_series_no[] = "time_series_no"; -static char __pyx_k_unique_Q_number[] = "unique_Q_number"; -static char __pyx_k_unique_R_number[] = "unique_R_number"; -static char __pyx_k_A_time_var_index[] = "A_time_var_index"; -static char __pyx_k_H_time_var_index[] = "H_time_var_index"; -static char __pyx_k_Q_time_var_index[] = "Q_time_var_index"; -static char __pyx_k_R_time_var_index[] = "R_time_var_index"; -static char __pyx_k_p_unique_Q_number[] = "p_unique_Q_number"; -static char __pyx_k_p_unique_R_number[] = "p_unique_R_number"; -static char __pyx_k_dP_pred_all_params[] = "dP_pred_all_params"; -static char __pyx_k_dm_pred_all_params[] = "dm_pred_all_params"; -static char __pyx_k_total_size_of_data[] = "total_size_of_data"; -static char __pyx_k_calc_log_likelihood[] = "calc_log_likelihood"; -static char __pyx_k_compute_derivatives[] = "compute_derivatives"; -static char __pyx_k_grad_log_likelihood[] = "grad_log_likelihood"; -static char __pyx_k_p_dynamic_callables[] = "p_dynamic_callables"; -static char __pyx_k_reconstruct_indices[] = "reconstruct_indices"; -static char __pyx_k_p_kalman_filter_type[] = "p_kalman_filter_type"; -static char __pyx_k_dA_derivative_is_None[] = "dA derivative is None"; -static char __pyx_k_dH_derivative_is_None[] = "dH derivative is None"; -static char __pyx_k_dQ_derivative_is_None[] = "dQ derivative is None"; -static char __pyx_k_dR_derivative_is_None[] = "dR derivative is None"; -static char __pyx_k_log_likelihood_update[] = "log_likelihood_update"; -static char __pyx_k_measurement_dim_gt_one[] = "measurement_dim_gt_one"; -static char __pyx_k_d_log_likelihood_update[] = "d_log_likelihood_update"; -static char __pyx_k_p_measurement_callables[] = "p_measurement_callables"; -static char __pyx_k_calc_grad_log_likelihood[] = "calc_grad_log_likelihood"; -static char __pyx_k_ndarray_is_not_C_contiguous[] = "ndarray is not C contiguous"; -static char __pyx_k_cython_Ak_is_not_implemented[] = "(cython) Ak is not implemented!"; -static char __pyx_k_cython_Hk_is_not_implemented[] = "(cython) Hk is not implemented!"; -static char __pyx_k_cython_Qk_is_not_implemented[] = "(cython) Qk is not implemented!"; -static char __pyx_k_cython_Rk_is_not_implemented[] = "(cython) Rk is not implemented!"; -static char __pyx_k_GPy_models_state_space_cython[] = "GPy.models.state_space_cython"; -static char __pyx_k_cython_dAk_is_not_implemented[] = "(cython) dAk is not implemented!"; -static char __pyx_k_cython_dQk_is_not_implemented[] = "(cython) dQk is not implemented!"; -static char __pyx_k_cython_f_a_is_not_implemented[] = "(cython) f_a is not implemented!"; -static char __pyx_k_kalman_update_step_SVD_Cython[] = "_kalman_update_step_SVD_Cython"; -static char __pyx_k_Contains_some_cython_code_for_s[] = "\nContains some cython code for state space modelling.\n"; -static char __pyx_k_Nan_values_in_likelihood_update[] = "Nan values in likelihood update!"; -static char __pyx_k_cont_discr_kalman_filter_raw_Cy[] = "_cont_discr_kalman_filter_raw_Cython"; -static char __pyx_k_cython_Q_srk_is_not_implemented[] = "(cython) Q_srk is not implemented!"; -static char __pyx_k_cython_reset_is_not_implemented[] = "(cython) reset is not implemented!"; -static char __pyx_k_kalman_prediction_step_SVD_Cyth[] = "_kalman_prediction_step_SVD_Cython"; -static char __pyx_k_unknown_dtype_code_in_numpy_pxd[] = "unknown dtype code in numpy.pxd (%d)"; -static char __pyx_k_users_agrigori_SpiderOak_sp_hiv[] = "/users/agrigori/SpiderOak/sp_hive/Programming/python/GPy/GPy/models/state_space_cython.pyx"; -static char __pyx_k_Format_string_allocated_too_shor[] = "Format string allocated too short, see comment in numpy.pxd"; -static char __pyx_k_Kalman_Filter_Update_SVD_S_is_ne[] = "Kalman Filter Update SVD: S is negative step %i"; -static char __pyx_k_Measurement_dimension_larger_the[] = "Measurement dimension larger then 1 is currently not supported"; -static char __pyx_k_Nan_measurements_are_currently_n[] = "Nan measurements are currently not supported if\n they are intermixed with not NaN measurements"; -static char __pyx_k_Non_native_byte_order_not_suppor[] = "Non-native byte order not supported"; -static char __pyx_k_ndarray_is_not_Fortran_contiguou[] = "ndarray is not Fortran contiguous"; -static char __pyx_k_Format_string_allocated_too_shor_2[] = "Format string allocated too short."; +static PyObject *__pyx_builtin_ImportError; +static const char __pyx_k_A[] = "A"; +static const char __pyx_k_H[] = "H"; +static const char __pyx_k_K[] = "K"; +static const char __pyx_k_M[] = "M"; +static const char __pyx_k_P[] = "P"; +static const char __pyx_k_Q[] = "Q"; +static const char __pyx_k_R[] = "R"; +static const char __pyx_k_S[] = "S"; +static const char __pyx_k_T[] = "T"; +static const char __pyx_k_U[] = "U"; +static const char __pyx_k_X[] = "X"; +static const char __pyx_k_Y[] = "Y"; +static const char __pyx_k_j[] = "j"; +static const char __pyx_k_k[] = "k"; +static const char __pyx_k_m[] = "m"; +static const char __pyx_k_v[] = "v"; +static const char __pyx_k_Ak[] = "Ak"; +static const char __pyx_k_As[] = "As"; +static const char __pyx_k_Hk[] = "Hk"; +static const char __pyx_k_Qk[] = "Qk"; +static const char __pyx_k_Qs[] = "Qs"; +static const char __pyx_k_Rk[] = "Rk"; +static const char __pyx_k_Vh[] = "Vh"; +static const char __pyx_k_dA[] = "dA"; +static const char __pyx_k_dH[] = "dH"; +static const char __pyx_k_dK[] = "dK"; +static const char __pyx_k_dQ[] = "dQ"; +static const char __pyx_k_dR[] = "dR"; +static const char __pyx_k_dS[] = "dS"; +static const char __pyx_k_dv[] = "dv"; +static const char __pyx_k_np[] = "np"; +static const char __pyx_k_pi[] = "pi"; +static const char __pyx_k_sp[] = "sp"; +static const char __pyx_k_all[] = "all"; +static const char __pyx_k_any[] = "any"; +static const char __pyx_k_dAk[] = "dAk"; +static const char __pyx_k_dAs[] = "dAs"; +static const char __pyx_k_dHk[] = "dHk"; +static const char __pyx_k_dQk[] = "dQk"; +static const char __pyx_k_dQs[] = "dQs"; +static const char __pyx_k_dRk[] = "dRk"; +static const char __pyx_k_dot[] = "dot"; +static const char __pyx_k_f_a[] = "f_a"; +static const char __pyx_k_f_h[] = "f_h"; +static const char __pyx_k_log[] = "log"; +static const char __pyx_k_new[] = "__new__"; +static const char __pyx_k_p_P[] = "p_P"; +static const char __pyx_k_p_m[] = "p_m"; +static const char __pyx_k_res[] = "res"; +static const char __pyx_k_ret[] = "ret"; +static const char __pyx_k_sum[] = "sum"; +static const char __pyx_k_svd[] = "svd"; +static const char __pyx_k_Q_sr[] = "Q_sr"; +static const char __pyx_k_axis[] = "axis"; +static const char __pyx_k_diag[] = "diag"; +static const char __pyx_k_dict[] = "__dict__"; +static const char __pyx_k_init[] = "__init__"; +static const char __pyx_k_main[] = "__main__"; +static const char __pyx_k_name[] = "__name__"; +static const char __pyx_k_p_dP[] = "p_dP"; +static const char __pyx_k_p_dm[] = "p_dm"; +static const char __pyx_k_sqrt[] = "sqrt"; +static const char __pyx_k_test[] = "__test__"; +static const char __pyx_k_tmp1[] = "tmp1"; +static const char __pyx_k_tmp2[] = "tmp2"; +static const char __pyx_k_tmp3[] = "tmp3"; +static const char __pyx_k_tmp5[] = "tmp5"; +static const char __pyx_k_DTYPE[] = "DTYPE"; +static const char __pyx_k_P_upd[] = "P_upd"; +static const char __pyx_k_Q_srk[] = "Q_srk"; +static const char __pyx_k_R_isr[] = "R_isr"; +static const char __pyx_k_S_new[] = "S_new"; +static const char __pyx_k_S_old[] = "S_old"; +static const char __pyx_k_S_svd[] = "S_svd"; +static const char __pyx_k_S_upd[] = "S_upd"; +static const char __pyx_k_U_upd[] = "U_upd"; +static const char __pyx_k_V_new[] = "V_new"; +static const char __pyx_k_V_old[] = "V_old"; +static const char __pyx_k_dtype[] = "dtype"; +static const char __pyx_k_empty[] = "empty"; +static const char __pyx_k_index[] = "index"; +static const char __pyx_k_int64[] = "int64"; +static const char __pyx_k_isnan[] = "isnan"; +static const char __pyx_k_m_upd[] = "m_upd"; +static const char __pyx_k_numpy[] = "numpy"; +static const char __pyx_k_param[] = "param"; +static const char __pyx_k_range[] = "range"; +static const char __pyx_k_reset[] = "reset"; +static const char __pyx_k_scipy[] = "scipy"; +static const char __pyx_k_shape[] = "shape"; +static const char __pyx_k_super[] = "super"; +static const char __pyx_k_zeros[] = "zeros"; +static const char __pyx_k_P_init[] = "P_init"; +static const char __pyx_k_P_pred[] = "P_pred"; +static const char __pyx_k_R_isrk[] = "R_isrk"; +static const char __pyx_k_S_pred[] = "S_pred"; +static const char __pyx_k_V_pred[] = "V_pred"; +static const char __pyx_k_dP_upd[] = "dP_upd"; +static const char __pyx_k_dm_upd[] = "dm_upd"; +static const char __pyx_k_import[] = "__import__"; +static const char __pyx_k_jitter[] = "jitter"; +static const char __pyx_k_linalg[] = "linalg"; +static const char __pyx_k_m_init[] = "m_init"; +static const char __pyx_k_m_pred[] = "m_pred"; +static const char __pyx_k_nbytes[] = "nbytes"; +static const char __pyx_k_pickle[] = "pickle"; +static const char __pyx_k_reduce[] = "__reduce__"; +static const char __pyx_k_unique[] = "unique"; +static const char __pyx_k_update[] = "update"; +static const char __pyx_k_vstack[] = "vstack"; +static const char __pyx_k_dP_init[] = "dP_init"; +static const char __pyx_k_dP_pred[] = "dP_pred"; +static const char __pyx_k_dm_init[] = "dm_init"; +static const char __pyx_k_dm_pred[] = "dm_pred"; +static const char __pyx_k_float64[] = "float64"; +static const char __pyx_k_regular[] = "regular"; +static const char __pyx_k_Prev_cov[] = "Prev_cov"; +static const char __pyx_k_getstate[] = "__getstate__"; +static const char __pyx_k_pyx_type[] = "__pyx_type"; +static const char __pyx_k_setstate[] = "__setstate__"; +static const char __pyx_k_steps_no[] = "steps_no"; +static const char __pyx_k_DTYPE_int[] = "DTYPE_int"; +static const char __pyx_k_Q_inverse[] = "Q_inverse"; +static const char __pyx_k_prev_mean[] = "prev_mean"; +static const char __pyx_k_pyx_state[] = "__pyx_state"; +static const char __pyx_k_reduce_ex[] = "__reduce_ex__"; +static const char __pyx_k_state_dim[] = "state_dim"; +static const char __pyx_k_ValueError[] = "ValueError"; +static const char __pyx_k_compute_uv[] = "compute_uv"; +static const char __pyx_k_pyx_result[] = "__pyx_result"; +static const char __pyx_k_pyx_vtable[] = "__pyx_vtable__"; +static const char __pyx_k_svd_1_matr[] = "svd_1_matr"; +static const char __pyx_k_svd_2_matr[] = "svd_2_matr"; +static const char __pyx_k_ImportError[] = "ImportError"; +static const char __pyx_k_PickleError[] = "PickleError"; +static const char __pyx_k_measurement[] = "measurement"; +static const char __pyx_k_overwrite_a[] = "overwrite_a"; +static const char __pyx_k_RuntimeError[] = "RuntimeError"; +static const char __pyx_k_check_finite[] = "check_finite"; +static const char __pyx_k_k_measurment[] = "k_measurment"; +static const char __pyx_k_param_number[] = "param_number"; +static const char __pyx_k_pyx_checksum[] = "__pyx_checksum"; +static const char __pyx_k_stringsource[] = "stringsource"; +static const char __pyx_k_dA_all_params[] = "dA_all_params"; +static const char __pyx_k_dH_all_params[] = "dH_all_params"; +static const char __pyx_k_dQ_all_params[] = "dQ_all_params"; +static const char __pyx_k_dR_all_params[] = "dR_all_params"; +static const char __pyx_k_full_matrices[] = "full_matrices"; +static const char __pyx_k_reduce_cython[] = "__reduce_cython__"; +static const char __pyx_k_NotImplemented[] = "NotImplemented"; +static const char __pyx_k_Q_inverse_dict[] = "Q_inverse_dict"; +static const char __pyx_k_grad_params_no[] = "grad_params_no"; +static const char __pyx_k_log_likelihood[] = "log_likelihood"; +static const char __pyx_k_time_series_no[] = "time_series_no"; +static const char __pyx_k_pyx_PickleError[] = "__pyx_PickleError"; +static const char __pyx_k_setstate_cython[] = "__setstate_cython__"; +static const char __pyx_k_unique_Q_number[] = "unique_Q_number"; +static const char __pyx_k_unique_R_number[] = "unique_R_number"; +static const char __pyx_k_A_time_var_index[] = "A_time_var_index"; +static const char __pyx_k_H_time_var_index[] = "H_time_var_index"; +static const char __pyx_k_Q_time_var_index[] = "Q_time_var_index"; +static const char __pyx_k_R_time_var_index[] = "R_time_var_index"; +static const char __pyx_k_Q_handling_Cython[] = "Q_handling_Cython"; +static const char __pyx_k_R_handling_Cython[] = "R_handling_Cython"; +static const char __pyx_k_p_unique_Q_number[] = "p_unique_Q_number"; +static const char __pyx_k_p_unique_R_number[] = "p_unique_R_number"; +static const char __pyx_k_Q_square_root_dict[] = "Q_square_root_dict"; +static const char __pyx_k_cline_in_traceback[] = "cline_in_traceback"; +static const char __pyx_k_dP_pred_all_params[] = "dP_pred_all_params"; +static const char __pyx_k_dm_pred_all_params[] = "dm_pred_all_params"; +static const char __pyx_k_total_size_of_data[] = "total_size_of_data"; +static const char __pyx_k_calc_log_likelihood[] = "calc_log_likelihood"; +static const char __pyx_k_compute_derivatives[] = "compute_derivatives"; +static const char __pyx_k_grad_log_likelihood[] = "grad_log_likelihood"; +static const char __pyx_k_p_dynamic_callables[] = "p_dynamic_callables"; +static const char __pyx_k_reconstruct_indices[] = "reconstruct_indices"; +static const char __pyx_k_p_kalman_filter_type[] = "p_kalman_filter_type"; +static const char __pyx_k_dA_derivative_is_None[] = "dA derivative is None"; +static const char __pyx_k_dH_derivative_is_None[] = "dH derivative is None"; +static const char __pyx_k_dQ_derivative_is_None[] = "dQ derivative is None"; +static const char __pyx_k_dR_derivative_is_None[] = "dR derivative is None"; +static const char __pyx_k_log_likelihood_update[] = "log_likelihood_update"; +static const char __pyx_k_AQcompute_batch_Cython[] = "AQcompute_batch_Cython"; +static const char __pyx_k_measurement_dim_gt_one[] = "measurement_dim_gt_one"; +static const char __pyx_k_d_log_likelihood_update[] = "d_log_likelihood_update"; +static const char __pyx_k_p_measurement_callables[] = "p_measurement_callables"; +static const char __pyx_k_Dynamic_Callables_Cython[] = "Dynamic_Callables_Cython"; +static const char __pyx_k_calc_grad_log_likelihood[] = "calc_grad_log_likelihood"; +static const char __pyx_k_ndarray_is_not_C_contiguous[] = "ndarray is not C contiguous"; +static const char __pyx_k_Measurement_Callables_Cython[] = "Measurement_Callables_Cython"; +static const char __pyx_k_Std_Dynamic_Callables_Cython[] = "Std_Dynamic_Callables_Cython"; +static const char __pyx_k_cython_Ak_is_not_implemented[] = "(cython) Ak is not implemented!"; +static const char __pyx_k_cython_Hk_is_not_implemented[] = "(cython) Hk is not implemented!"; +static const char __pyx_k_cython_Qk_is_not_implemented[] = "(cython) Qk is not implemented!"; +static const char __pyx_k_cython_Rk_is_not_implemented[] = "(cython) Rk is not implemented!"; +static const char __pyx_k_GPy_models_state_space_cython[] = "GPy.models.state_space_cython"; +static const char __pyx_k_cython_dAk_is_not_implemented[] = "(cython) dAk is not implemented!"; +static const char __pyx_k_cython_dQk_is_not_implemented[] = "(cython) dQk is not implemented!"; +static const char __pyx_k_cython_f_a_is_not_implemented[] = "(cython) f_a is not implemented!"; +static const char __pyx_k_kalman_update_step_SVD_Cython[] = "_kalman_update_step_SVD_Cython"; +static const char __pyx_k_pyx_unpickle_AQcompute_batch_C[] = "__pyx_unpickle_AQcompute_batch_Cython"; +static const char __pyx_k_pyx_unpickle_Dynamic_Callables[] = "__pyx_unpickle_Dynamic_Callables_Cython"; +static const char __pyx_k_pyx_unpickle_Measurement_Calla[] = "__pyx_unpickle_Measurement_Callables_Cython"; +static const char __pyx_k_pyx_unpickle_Q_handling_Cython[] = "__pyx_unpickle_Q_handling_Cython"; +static const char __pyx_k_pyx_unpickle_R_handling_Cython[] = "__pyx_unpickle_R_handling_Cython"; +static const char __pyx_k_pyx_unpickle_Std_Dynamic_Calla[] = "__pyx_unpickle_Std_Dynamic_Callables_Cython"; +static const char __pyx_k_pyx_unpickle_Std_Measurement_C[] = "__pyx_unpickle_Std_Measurement_Callables_Cython"; +static const char __pyx_k_Contains_some_cython_code_for_s[] = "\nContains some cython code for state space modelling.\n"; +static const char __pyx_k_Nan_values_in_likelihood_update[] = "Nan values in likelihood update!"; +static const char __pyx_k_cont_discr_kalman_filter_raw_Cy[] = "_cont_discr_kalman_filter_raw_Cython"; +static const char __pyx_k_cython_Q_srk_is_not_implemented[] = "(cython) Q_srk is not implemented!"; +static const char __pyx_k_cython_reset_is_not_implemented[] = "(cython) reset is not implemented!"; +static const char __pyx_k_kalman_prediction_step_SVD_Cyth[] = "_kalman_prediction_step_SVD_Cython"; +static const char __pyx_k_numpy_core_multiarray_failed_to[] = "numpy.core.multiarray failed to import"; +static const char __pyx_k_unknown_dtype_code_in_numpy_pxd[] = "unknown dtype code in numpy.pxd (%d)"; +static const char __pyx_k_Format_string_allocated_too_shor[] = "Format string allocated too short, see comment in numpy.pxd"; +static const char __pyx_k_GPy_models_state_space_cython_py[] = "GPy/models/state_space_cython.pyx"; +static const char __pyx_k_Incompatible_checksums_s_vs_0x14[] = "Incompatible checksums (%s vs 0x146e1f7 = (As, Q, Q_square_root, Q_svd_dict, Q_time_var_index, Qs, dAs, dQ, dQs, index, last_k, reconstruct_indices, svd_each_time))"; +static const char __pyx_k_Incompatible_checksums_s_vs_0x70[] = "Incompatible checksums (%s vs 0x706c35f = (H, H_time_var_index, R, R_square_root, R_time_var_index, dH, dR, index, svd_each_time))"; +static const char __pyx_k_Incompatible_checksums_s_vs_0x77[] = "Incompatible checksums (%s vs 0x77b5360 = (Q, Q_square_root, Q_time_var_index, dQ, index, svd_each_time))"; +static const char __pyx_k_Incompatible_checksums_s_vs_0x9e[] = "Incompatible checksums (%s vs 0x9e97ca7 = (R, R_square_root, R_time_var_index, dR, index, svd_each_time))"; +static const char __pyx_k_Incompatible_checksums_s_vs_0xd4[] = "Incompatible checksums (%s vs 0xd41d8cd = ())"; +static const char __pyx_k_Incompatible_checksums_s_vs_0xdf[] = "Incompatible checksums (%s vs 0xdff0f56 = (A, A_time_var_index, Q, Q_square_root, Q_time_var_index, dA, dQ, index, svd_each_time))"; +static const char __pyx_k_Kalman_Filter_Update_SVD_S_is_ne[] = "Kalman Filter Update SVD: S is negative step %i"; +static const char __pyx_k_Measurement_dimension_larger_the[] = "Measurement dimension larger then 1 is currently not supported"; +static const char __pyx_k_Nan_measurements_are_currently_n[] = "Nan measurements are currently not supported if\n they are intermixed with not NaN measurements"; +static const char __pyx_k_Non_native_byte_order_not_suppor[] = "Non-native byte order not supported"; +static const char __pyx_k_Std_Measurement_Callables_Cython[] = "Std_Measurement_Callables_Cython"; +static const char __pyx_k_ndarray_is_not_Fortran_contiguou[] = "ndarray is not Fortran contiguous"; +static const char __pyx_k_numpy_core_umath_failed_to_impor[] = "numpy.core.umath failed to import"; +static const char __pyx_k_Format_string_allocated_too_shor_2[] = "Format string allocated too short."; static PyObject *__pyx_n_s_A; +static PyObject *__pyx_n_s_AQcompute_batch_Cython; static PyObject *__pyx_n_s_A_time_var_index; static PyObject *__pyx_n_s_Ak; static PyObject *__pyx_n_s_As; static PyObject *__pyx_n_s_DTYPE; static PyObject *__pyx_n_s_DTYPE_int; +static PyObject *__pyx_n_s_Dynamic_Callables_Cython; static PyObject *__pyx_kp_u_Format_string_allocated_too_shor; static PyObject *__pyx_kp_u_Format_string_allocated_too_shor_2; static PyObject *__pyx_n_s_GPy_models_state_space_cython; +static PyObject *__pyx_kp_s_GPy_models_state_space_cython_py; static PyObject *__pyx_n_s_H; static PyObject *__pyx_n_s_H_time_var_index; static PyObject *__pyx_n_s_Hk; +static PyObject *__pyx_n_s_ImportError; +static PyObject *__pyx_kp_s_Incompatible_checksums_s_vs_0x14; +static PyObject *__pyx_kp_s_Incompatible_checksums_s_vs_0x70; +static PyObject *__pyx_kp_s_Incompatible_checksums_s_vs_0x77; +static PyObject *__pyx_kp_s_Incompatible_checksums_s_vs_0x9e; +static PyObject *__pyx_kp_s_Incompatible_checksums_s_vs_0xd4; +static PyObject *__pyx_kp_s_Incompatible_checksums_s_vs_0xdf; static PyObject *__pyx_n_s_K; static PyObject *__pyx_kp_s_Kalman_Filter_Update_SVD_S_is_ne; static PyObject *__pyx_n_s_M; +static PyObject *__pyx_n_s_Measurement_Callables_Cython; static PyObject *__pyx_kp_s_Measurement_dimension_larger_the; static PyObject *__pyx_kp_s_Nan_measurements_are_currently_n; static PyObject *__pyx_kp_s_Nan_values_in_likelihood_update; @@ -1770,14 +2397,20 @@ static PyObject *__pyx_n_s_P; static PyObject *__pyx_n_s_P_init; static PyObject *__pyx_n_s_P_pred; static PyObject *__pyx_n_s_P_upd; +static PyObject *__pyx_n_s_PickleError; static PyObject *__pyx_n_s_Prev_cov; static PyObject *__pyx_n_s_Q; +static PyObject *__pyx_n_s_Q_handling_Cython; +static PyObject *__pyx_n_s_Q_inverse; +static PyObject *__pyx_n_s_Q_inverse_dict; +static PyObject *__pyx_n_s_Q_square_root_dict; static PyObject *__pyx_n_s_Q_sr; static PyObject *__pyx_n_s_Q_srk; static PyObject *__pyx_n_s_Q_time_var_index; static PyObject *__pyx_n_s_Qk; static PyObject *__pyx_n_s_Qs; static PyObject *__pyx_n_s_R; +static PyObject *__pyx_n_s_R_handling_Cython; static PyObject *__pyx_n_s_R_isr; static PyObject *__pyx_n_s_R_isrk; static PyObject *__pyx_n_s_R_time_var_index; @@ -1789,6 +2422,8 @@ static PyObject *__pyx_n_s_S_old; static PyObject *__pyx_n_s_S_pred; static PyObject *__pyx_n_s_S_svd; static PyObject *__pyx_n_s_S_upd; +static PyObject *__pyx_n_s_Std_Dynamic_Callables_Cython; +static PyObject *__pyx_n_s_Std_Measurement_Callables_Cython; static PyObject *__pyx_n_s_T; static PyObject *__pyx_n_s_U; static PyObject *__pyx_n_s_U_upd; @@ -1805,6 +2440,7 @@ static PyObject *__pyx_n_s_axis; static PyObject *__pyx_n_s_calc_grad_log_likelihood; static PyObject *__pyx_n_s_calc_log_likelihood; static PyObject *__pyx_n_s_check_finite; +static PyObject *__pyx_n_s_cline_in_traceback; static PyObject *__pyx_n_s_compute_derivatives; static PyObject *__pyx_n_s_compute_uv; static PyObject *__pyx_n_s_cont_discr_kalman_filter_raw_Cy; @@ -1843,6 +2479,7 @@ static PyObject *__pyx_n_s_dRk; static PyObject *__pyx_n_s_dS; static PyObject *__pyx_n_s_d_log_likelihood_update; static PyObject *__pyx_n_s_diag; +static PyObject *__pyx_n_s_dict; static PyObject *__pyx_n_s_dm_init; static PyObject *__pyx_n_s_dm_pred; static PyObject *__pyx_n_s_dm_pred_all_params; @@ -1855,6 +2492,7 @@ static PyObject *__pyx_n_s_f_a; static PyObject *__pyx_n_s_f_h; static PyObject *__pyx_n_s_float64; static PyObject *__pyx_n_s_full_matrices; +static PyObject *__pyx_n_s_getstate; static PyObject *__pyx_n_s_grad_log_likelihood; static PyObject *__pyx_n_s_grad_params_no; static PyObject *__pyx_n_s_import; @@ -1863,6 +2501,7 @@ static PyObject *__pyx_n_s_init; static PyObject *__pyx_n_s_int64; static PyObject *__pyx_n_s_isnan; static PyObject *__pyx_n_s_j; +static PyObject *__pyx_n_s_jitter; static PyObject *__pyx_n_s_k; static PyObject *__pyx_n_s_k_measurment; static PyObject *__pyx_n_s_kalman_prediction_step_SVD_Cyth; @@ -1878,11 +2517,15 @@ static PyObject *__pyx_n_s_m_upd; static PyObject *__pyx_n_s_main; static PyObject *__pyx_n_s_measurement; static PyObject *__pyx_n_s_measurement_dim_gt_one; +static PyObject *__pyx_n_s_name; static PyObject *__pyx_n_s_nbytes; static PyObject *__pyx_kp_u_ndarray_is_not_C_contiguous; static PyObject *__pyx_kp_u_ndarray_is_not_Fortran_contiguou; +static PyObject *__pyx_n_s_new; static PyObject *__pyx_n_s_np; static PyObject *__pyx_n_s_numpy; +static PyObject *__pyx_kp_s_numpy_core_multiarray_failed_to; +static PyObject *__pyx_kp_s_numpy_core_umath_failed_to_impor; static PyObject *__pyx_n_s_overwrite_a; static PyObject *__pyx_n_s_p_P; static PyObject *__pyx_n_s_p_dP; @@ -1896,20 +2539,39 @@ static PyObject *__pyx_n_s_p_unique_R_number; static PyObject *__pyx_n_s_param; static PyObject *__pyx_n_s_param_number; static PyObject *__pyx_n_s_pi; +static PyObject *__pyx_n_s_pickle; static PyObject *__pyx_n_s_prev_mean; +static PyObject *__pyx_n_s_pyx_PickleError; +static PyObject *__pyx_n_s_pyx_checksum; +static PyObject *__pyx_n_s_pyx_result; +static PyObject *__pyx_n_s_pyx_state; +static PyObject *__pyx_n_s_pyx_type; +static PyObject *__pyx_n_s_pyx_unpickle_AQcompute_batch_C; +static PyObject *__pyx_n_s_pyx_unpickle_Dynamic_Callables; +static PyObject *__pyx_n_s_pyx_unpickle_Measurement_Calla; +static PyObject *__pyx_n_s_pyx_unpickle_Q_handling_Cython; +static PyObject *__pyx_n_s_pyx_unpickle_R_handling_Cython; +static PyObject *__pyx_n_s_pyx_unpickle_Std_Dynamic_Calla; +static PyObject *__pyx_n_s_pyx_unpickle_Std_Measurement_C; static PyObject *__pyx_n_s_pyx_vtable; static PyObject *__pyx_n_s_range; static PyObject *__pyx_n_s_reconstruct_indices; +static PyObject *__pyx_n_s_reduce; +static PyObject *__pyx_n_s_reduce_cython; +static PyObject *__pyx_n_s_reduce_ex; static PyObject *__pyx_n_s_regular; static PyObject *__pyx_n_s_res; static PyObject *__pyx_n_s_reset; static PyObject *__pyx_n_s_ret; static PyObject *__pyx_n_s_scipy; +static PyObject *__pyx_n_s_setstate; +static PyObject *__pyx_n_s_setstate_cython; static PyObject *__pyx_n_s_shape; static PyObject *__pyx_n_s_sp; static PyObject *__pyx_n_s_sqrt; static PyObject *__pyx_n_s_state_dim; static PyObject *__pyx_n_s_steps_no; +static PyObject *__pyx_kp_s_stringsource; static PyObject *__pyx_n_s_sum; static PyObject *__pyx_n_s_super; static PyObject *__pyx_n_s_svd; @@ -1926,10 +2588,83 @@ static PyObject *__pyx_n_s_unique; static PyObject *__pyx_n_s_unique_Q_number; static PyObject *__pyx_n_s_unique_R_number; static PyObject *__pyx_kp_u_unknown_dtype_code_in_numpy_pxd; -static PyObject *__pyx_kp_s_users_agrigori_SpiderOak_sp_hiv; +static PyObject *__pyx_n_s_update; static PyObject *__pyx_n_s_v; static PyObject *__pyx_n_s_vstack; static PyObject *__pyx_n_s_zeros; +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_f_a(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_k, PyArrayObject *__pyx_v_m, PyArrayObject *__pyx_v_A); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_2Ak(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_k, PyArrayObject *__pyx_v_m, PyArrayObject *__pyx_v_P); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_4Qk(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_6Q_srk(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_8dAk(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_10dQk(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_12reset(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_compute_derivatives); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_14__reduce_cython__(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_16__setstate_cython__(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_self, PyObject *__pyx_v___pyx_state); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_f_h(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_self, int __pyx_v_k, PyArrayObject *__pyx_v_m_pred, PyArrayObject *__pyx_v_Hk); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_2Hk(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_self, int __pyx_v_k, PyArrayObject *__pyx_v_m_pred, PyArrayObject *__pyx_v_P_pred); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_4Rk(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_6R_isrk(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_8dHk(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_10dRk(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_12reset(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_self, PyObject *__pyx_v_compute_derivatives); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_14__reduce_cython__(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_16__setstate_cython__(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_self, PyObject *__pyx_v___pyx_state); /* proto */ +static int __pyx_pf_3GPy_6models_18state_space_cython_17R_handling_Cython___init__(struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython *__pyx_v_self, PyArrayObject *__pyx_v_R, PyArrayObject *__pyx_v_index, int __pyx_v_R_time_var_index, int __pyx_v_p_unique_R_number, PyArrayObject *__pyx_v_dR); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_17R_handling_Cython_2Rk(struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_17R_handling_Cython_4dRk(struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_17R_handling_Cython_6R_isrk(struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_17R_handling_Cython_8__reduce_cython__(struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_17R_handling_Cython_10__setstate_cython__(struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython *__pyx_v_self, PyObject *__pyx_v___pyx_state); /* proto */ +static int __pyx_pf_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython___init__(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *__pyx_v_self, PyArrayObject *__pyx_v_H, int __pyx_v_H_time_var_index, PyArrayObject *__pyx_v_R, PyArrayObject *__pyx_v_index, int __pyx_v_R_time_var_index, int __pyx_v_unique_R_number, PyArrayObject *__pyx_v_dH, PyArrayObject *__pyx_v_dR); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_2f_h(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *__pyx_v_self, int __pyx_v_k, PyArrayObject *__pyx_v_m, PyArrayObject *__pyx_v_H); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_4Hk(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *__pyx_v_self, int __pyx_v_k, PyArrayObject *__pyx_v_m_pred, PyArrayObject *__pyx_v_P_pred); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_6dHk(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_8__reduce_cython__(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_10__setstate_cython__(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *__pyx_v_self, PyObject *__pyx_v___pyx_state); /* proto */ +static int __pyx_pf_3GPy_6models_18state_space_cython_17Q_handling_Cython___init__(struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython *__pyx_v_self, PyArrayObject *__pyx_v_Q, PyArrayObject *__pyx_v_index, int __pyx_v_Q_time_var_index, int __pyx_v_p_unique_Q_number, PyArrayObject *__pyx_v_dQ); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_17Q_handling_Cython_2Qk(struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_17Q_handling_Cython_4dQk(struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_17Q_handling_Cython_6Q_srk(struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_17Q_handling_Cython_8__reduce_cython__(struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_17Q_handling_Cython_10__setstate_cython__(struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython *__pyx_v_self, PyObject *__pyx_v___pyx_state); /* proto */ +static int __pyx_pf_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython___init__(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *__pyx_v_self, PyArrayObject *__pyx_v_A, int __pyx_v_A_time_var_index, PyArrayObject *__pyx_v_Q, PyArrayObject *__pyx_v_index, int __pyx_v_Q_time_var_index, int __pyx_v_unique_Q_number, PyArrayObject *__pyx_v_dA, PyArrayObject *__pyx_v_dQ); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_2f_a(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_k, PyArrayObject *__pyx_v_m, PyArrayObject *__pyx_v_A); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_4Ak(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_k, PyArrayObject *__pyx_v_m_pred, PyArrayObject *__pyx_v_P_pred); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_6dAk(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_8reset(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *__pyx_v_self, int __pyx_v_compute_derivatives); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_10__reduce_cython__(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_12__setstate_cython__(struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *__pyx_v_self, PyObject *__pyx_v___pyx_state); /* proto */ +static int __pyx_pf_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython___init__(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, PyArrayObject *__pyx_v_As, PyArrayObject *__pyx_v_Qs, PyArrayObject *__pyx_v_reconstruct_indices, PyArrayObject *__pyx_v_dAs, PyArrayObject *__pyx_v_dQs); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_2f_a(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_v_k, PyArrayObject *__pyx_v_m, PyArrayObject *__pyx_v_A); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_4reset(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_v_compute_derivatives); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_6Ak(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_v_k, PyArrayObject *__pyx_v_m, PyArrayObject *__pyx_v_P); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_8Qk(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_10dAk(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_12dQk(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_14Q_srk(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_v_k); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_16Q_inverse(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, int __pyx_v_k, float __pyx_v_jitter); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_18__reduce_cython__(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_20__setstate_cython__(struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *__pyx_v_self, PyObject *__pyx_v___pyx_state); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython__kalman_prediction_step_SVD_Cython(CYTHON_UNUSED PyObject *__pyx_self, long __pyx_v_k, PyArrayObject *__pyx_v_p_m, PyObject *__pyx_v_p_P, struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_p_dynamic_callables, int __pyx_v_calc_grad_log_likelihood, PyArrayObject *__pyx_v_p_dm, PyArrayObject *__pyx_v_p_dP); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_2_kalman_update_step_SVD_Cython(CYTHON_UNUSED PyObject *__pyx_self, long __pyx_v_k, PyArrayObject *__pyx_v_p_m, PyObject *__pyx_v_p_P, struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_p_measurement_callables, PyArrayObject *__pyx_v_measurement, int __pyx_v_calc_log_likelihood, int __pyx_v_calc_grad_log_likelihood, PyArrayObject *__pyx_v_p_dm, PyArrayObject *__pyx_v_p_dP); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_4_cont_discr_kalman_filter_raw_Cython(CYTHON_UNUSED PyObject *__pyx_self, int __pyx_v_state_dim, struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *__pyx_v_p_dynamic_callables, struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *__pyx_v_p_measurement_callables, CYTHON_UNUSED PyObject *__pyx_v_X, PyObject *__pyx_v_Y, PyArrayObject *__pyx_v_m_init, PyArrayObject *__pyx_v_P_init, CYTHON_UNUSED PyObject *__pyx_v_p_kalman_filter_type, int __pyx_v_calc_log_likelihood, int __pyx_v_calc_grad_log_likelihood, int __pyx_v_grad_params_no, PyArrayObject *__pyx_v_dm_init, PyArrayObject *__pyx_v_dP_init); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_6__pyx_unpickle_Dynamic_Callables_Cython(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v___pyx_type, long __pyx_v___pyx_checksum, PyObject *__pyx_v___pyx_state); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_8__pyx_unpickle_Measurement_Callables_Cython(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v___pyx_type, long __pyx_v___pyx_checksum, PyObject *__pyx_v___pyx_state); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_10__pyx_unpickle_R_handling_Cython(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v___pyx_type, long __pyx_v___pyx_checksum, PyObject *__pyx_v___pyx_state); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_12__pyx_unpickle_Std_Measurement_Callables_Cython(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v___pyx_type, long __pyx_v___pyx_checksum, PyObject *__pyx_v___pyx_state); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_14__pyx_unpickle_Q_handling_Cython(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v___pyx_type, long __pyx_v___pyx_checksum, PyObject *__pyx_v___pyx_state); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_16__pyx_unpickle_Std_Dynamic_Callables_Cython(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v___pyx_type, long __pyx_v___pyx_checksum, PyObject *__pyx_v___pyx_state); /* proto */ +static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_18__pyx_unpickle_AQcompute_batch_Cython(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v___pyx_type, long __pyx_v___pyx_checksum, PyObject *__pyx_v___pyx_state); /* proto */ +static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, Py_buffer *__pyx_v_info, int __pyx_v_flags); /* proto */ +static void __pyx_pf_5numpy_7ndarray_2__releasebuffer__(PyArrayObject *__pyx_v_self, Py_buffer *__pyx_v_info); /* proto */ +static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ +static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_Measurement_Callables_Cython(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ +static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_R_handling_Cython(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ +static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ +static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_Q_handling_Cython(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ +static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ +static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_AQcompute_batch_Cython(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_float_0_5; static PyObject *__pyx_float_1_0; static PyObject *__pyx_float_1eneg_17; @@ -1937,6 +2672,12 @@ static PyObject *__pyx_float_neg_0_5; static PyObject *__pyx_int_0; static PyObject *__pyx_int_1; static PyObject *__pyx_int_2; +static PyObject *__pyx_int_21422583; +static PyObject *__pyx_int_117883743; +static PyObject *__pyx_int_125522784; +static PyObject *__pyx_int_166296743; +static PyObject *__pyx_int_222419149; +static PyObject *__pyx_int_234819414; static PyObject *__pyx_tuple_; static PyObject *__pyx_tuple__2; static PyObject *__pyx_tuple__3; @@ -1946,117 +2687,43 @@ static PyObject *__pyx_tuple__6; static PyObject *__pyx_tuple__7; static PyObject *__pyx_tuple__8; static PyObject *__pyx_tuple__9; -static PyObject *__pyx_slice__15; -static PyObject *__pyx_slice__16; -static PyObject *__pyx_slice__18; 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Total number of iterations equal to the \n number of measurements.\n \n p_m: matrix of size (state_dim, time_series_no)\n Mean value from the previous step. For \"multiple time series mode\" \n it is matrix, second dimension of which correspond to different\n time series.\n \n p_P: tuple (Prev_cov, S, V)\n Covariance matrix from the previous step and its SVD decomposition.\n Prev_cov = V * S * V.T The tuple is (Prev_cov, S, V) \n \n p_a: function (k, x_{k-1}, A_{k}). Dynamic function. \n k (iteration number), starts at 0\n x_{k-1} State from the previous step\n A_{k} Jacobian matrices of f_a. In the linear case it is exactly A_{k}.\n \n p_f_A: function (k, m, P) return Jacobian of dynamic function, it is\n passed into p_a.\n k (iteration number), starts at 0\n m: point where Jacobian is evaluated\n P: parameter for Jacobian, usually covariance matrix.\n \n p_f_Q: function (k). 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PyArrayObject *__pyx_v_p_m = 0; @@ -12969,9 +17426,6 @@ static PyObject *__pyx_pw_3GPy_6models_18state_space_cython_1_kalman_prediction_ int __pyx_v_calc_grad_log_likelihood; PyArrayObject *__pyx_v_p_dm = 0; PyArrayObject *__pyx_v_p_dP = 0; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; PyObject *__pyx_r = 0; __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("_kalman_prediction_step_SVD_Cython (wrapper)", 0); @@ -12979,7 +17433,7 @@ static PyObject *__pyx_pw_3GPy_6models_18state_space_cython_1_kalman_prediction_ static PyObject **__pyx_pyargnames[] = {&__pyx_n_s_k,&__pyx_n_s_p_m,&__pyx_n_s_p_P,&__pyx_n_s_p_dynamic_callables,&__pyx_n_s_calc_grad_log_likelihood,&__pyx_n_s_p_dm,&__pyx_n_s_p_dP,0}; PyObject* values[7] = {0,0,0,0,0,0,0}; - /* "GPy/models/state_space_cython.pyx":513 + /* "GPy/models/state_space_cython.pyx":550 * Dynamic_Callables_Cython p_dynamic_callables, * bint calc_grad_log_likelihood=False, * np.ndarray[DTYPE_t, ndim=3] p_dm = None, # <<<<<<<<<<<<<< @@ -12988,7 +17442,7 @@ static PyObject *__pyx_pw_3GPy_6models_18state_space_cython_1_kalman_prediction_ */ values[5] = (PyObject *)((PyArrayObject *)Py_None); - /* "GPy/models/state_space_cython.pyx":514 + /* "GPy/models/state_space_cython.pyx":551 * bint calc_grad_log_likelihood=False, * np.ndarray[DTYPE_t, ndim=3] p_dm = None, * np.ndarray[DTYPE_t, ndim=3] p_dP = None): # <<<<<<<<<<<<<< @@ -13001,59 +17455,75 @@ static PyObject *__pyx_pw_3GPy_6models_18state_space_cython_1_kalman_prediction_ const Py_ssize_t pos_args = PyTuple_GET_SIZE(__pyx_args); switch (pos_args) { case 7: values[6] = PyTuple_GET_ITEM(__pyx_args, 6); + CYTHON_FALLTHROUGH; case 6: values[5] = PyTuple_GET_ITEM(__pyx_args, 5); + CYTHON_FALLTHROUGH; case 5: values[4] = PyTuple_GET_ITEM(__pyx_args, 4); + CYTHON_FALLTHROUGH; case 4: values[3] = PyTuple_GET_ITEM(__pyx_args, 3); + CYTHON_FALLTHROUGH; case 3: values[2] = PyTuple_GET_ITEM(__pyx_args, 2); + CYTHON_FALLTHROUGH; case 2: values[1] = PyTuple_GET_ITEM(__pyx_args, 1); + CYTHON_FALLTHROUGH; case 1: values[0] = PyTuple_GET_ITEM(__pyx_args, 0); + CYTHON_FALLTHROUGH; case 0: break; default: goto __pyx_L5_argtuple_error; } kw_args = PyDict_Size(__pyx_kwds); 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static PyObject *__pyx_pw_3GPy_6models_18state_space_cython_3_kalman_update_step_SVD_Cython(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds) { long __pyx_v_k; PyArrayObject *__pyx_v_p_m = 0; @@ -14832,9 +19458,6 @@ static PyObject *__pyx_pw_3GPy_6models_18state_space_cython_3_kalman_update_step int __pyx_v_calc_grad_log_likelihood; PyArrayObject *__pyx_v_p_dm = 0; PyArrayObject *__pyx_v_p_dP = 0; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; PyObject *__pyx_r = 0; __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("_kalman_update_step_SVD_Cython (wrapper)", 0); @@ -14842,7 +19465,7 @@ static PyObject *__pyx_pw_3GPy_6models_18state_space_cython_3_kalman_update_step static PyObject **__pyx_pyargnames[] = {&__pyx_n_s_k,&__pyx_n_s_p_m,&__pyx_n_s_p_P,&__pyx_n_s_p_measurement_callables,&__pyx_n_s_measurement,&__pyx_n_s_calc_log_likelihood,&__pyx_n_s_calc_grad_log_likelihood,&__pyx_n_s_p_dm,&__pyx_n_s_p_dP,0}; PyObject* values[9] = {0,0,0,0,0,0,0,0,0}; - /* "GPy/models/state_space_cython.pyx":654 + /* "GPy/models/state_space_cython.pyx":691 * bint calc_log_likelihood= False, * bint calc_grad_log_likelihood=False, * np.ndarray[DTYPE_t, ndim=3] p_dm = None, # <<<<<<<<<<<<<< @@ -14851,7 +19474,7 @@ static PyObject *__pyx_pw_3GPy_6models_18state_space_cython_3_kalman_update_step */ values[7] = (PyObject *)((PyArrayObject *)Py_None); - /* "GPy/models/state_space_cython.pyx":655 + /* "GPy/models/state_space_cython.pyx":692 * bint calc_grad_log_likelihood=False, * np.ndarray[DTYPE_t, ndim=3] p_dm = None, * np.ndarray[DTYPE_t, ndim=3] p_dP = None): # <<<<<<<<<<<<<< @@ -14864,72 +19487,93 @@ static PyObject *__pyx_pw_3GPy_6models_18state_space_cython_3_kalman_update_step const Py_ssize_t pos_args = PyTuple_GET_SIZE(__pyx_args); switch (pos_args) { case 9: values[8] = PyTuple_GET_ITEM(__pyx_args, 8); + CYTHON_FALLTHROUGH; case 8: values[7] = PyTuple_GET_ITEM(__pyx_args, 7); + CYTHON_FALLTHROUGH; case 7: values[6] = PyTuple_GET_ITEM(__pyx_args, 6); + CYTHON_FALLTHROUGH; case 6: values[5] = PyTuple_GET_ITEM(__pyx_args, 5); + CYTHON_FALLTHROUGH; case 5: values[4] = PyTuple_GET_ITEM(__pyx_args, 4); + CYTHON_FALLTHROUGH; case 4: values[3] = PyTuple_GET_ITEM(__pyx_args, 3); + CYTHON_FALLTHROUGH; case 3: values[2] = PyTuple_GET_ITEM(__pyx_args, 2); + CYTHON_FALLTHROUGH; case 2: values[1] = PyTuple_GET_ITEM(__pyx_args, 1); + CYTHON_FALLTHROUGH; case 1: values[0] = PyTuple_GET_ITEM(__pyx_args, 0); + CYTHON_FALLTHROUGH; case 0: break; default: goto __pyx_L5_argtuple_error; } kw_args = PyDict_Size(__pyx_kwds); switch (pos_args) { case 0: - if (likely((values[0] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_k)) != 0)) kw_args--; + if (likely((values[0] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_k)) != 0)) kw_args--; else goto __pyx_L5_argtuple_error; + CYTHON_FALLTHROUGH; case 1: - if (likely((values[1] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_p_m)) != 0)) kw_args--; + if (likely((values[1] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_p_m)) != 0)) kw_args--; 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if (value) { values[5] = value; kw_args--; } } + CYTHON_FALLTHROUGH; case 6: if (kw_args > 0) { - PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_calc_grad_log_likelihood); + PyObject* value = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_calc_grad_log_likelihood); if (value) { values[6] = value; kw_args--; } } + CYTHON_FALLTHROUGH; case 7: if (kw_args > 0) { - PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_p_dm); + PyObject* value = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_p_dm); if (value) { values[7] = value; kw_args--; } } + CYTHON_FALLTHROUGH; case 8: if (kw_args > 0) { - PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_p_dP); + PyObject* value = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_p_dP); if (value) { values[8] = value; kw_args--; } } } if (unlikely(kw_args > 0)) { - if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "_kalman_update_step_SVD_Cython") < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 649; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "_kalman_update_step_SVD_Cython") < 0)) __PYX_ERR(0, 686, __pyx_L3_error) } } else { switch (PyTuple_GET_SIZE(__pyx_args)) { case 9: values[8] = PyTuple_GET_ITEM(__pyx_args, 8); + CYTHON_FALLTHROUGH; case 8: values[7] = PyTuple_GET_ITEM(__pyx_args, 7); + CYTHON_FALLTHROUGH; case 7: values[6] = PyTuple_GET_ITEM(__pyx_args, 6); + CYTHON_FALLTHROUGH; case 6: values[5] = PyTuple_GET_ITEM(__pyx_args, 5); + CYTHON_FALLTHROUGH; case 5: values[4] = PyTuple_GET_ITEM(__pyx_args, 4); values[3] = PyTuple_GET_ITEM(__pyx_args, 3); values[2] = PyTuple_GET_ITEM(__pyx_args, 2); @@ -14939,16 +19583,16 @@ static PyObject *__pyx_pw_3GPy_6models_18state_space_cython_3_kalman_update_step default: goto __pyx_L5_argtuple_error; } } - __pyx_v_k = __Pyx_PyInt_As_long(values[0]); if (unlikely((__pyx_v_k == (long)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 649; 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- /* "GPy/models/state_space_cython.pyx":649 + /* "GPy/models/state_space_cython.pyx":686 * * @cython.boundscheck(False) * def _kalman_update_step_SVD_Cython(long k, np.ndarray[DTYPE_t, ndim=2] p_m, tuple p_P, # <<<<<<<<<<<<<< @@ -15144,7 +19788,7 @@ static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_2_kalman_update_step PyObject *__pyx_t_10 = NULL; PyObject *__pyx_t_11 = NULL; PyObject *__pyx_t_12 = NULL; - Py_ssize_t __pyx_t_13; + int __pyx_t_13; PyObject *__pyx_t_14 = NULL; PyArrayObject *__pyx_t_15 = NULL; PyArrayObject *__pyx_t_16 = NULL; @@ -15156,22 +19800,19 @@ static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_2_kalman_update_step PyArrayObject *__pyx_t_22 = NULL; int __pyx_t_23; PyArrayObject *__pyx_t_24 = NULL; - int __pyx_t_25; + PyObject *__pyx_t_25 = NULL; PyObject *__pyx_t_26 = NULL; PyObject *__pyx_t_27 = NULL; - PyObject *__pyx_t_28 = NULL; + PyArrayObject *__pyx_t_28 = NULL; PyArrayObject *__pyx_t_29 = NULL; PyArrayObject *__pyx_t_30 = NULL; PyArrayObject *__pyx_t_31 = NULL; 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__pyx_pybuffernd_p_dP.diminfo[0].shape = __pyx_pybuffernd_p_dP.rcbuffer->pybuffer.shape[0]; __pyx_pybuffernd_p_dP.diminfo[1].strides = __pyx_pybuffernd_p_dP.rcbuffer->pybuffer.strides[1]; __pyx_pybuffernd_p_dP.diminfo[1].shape = __pyx_pybuffernd_p_dP.rcbuffer->pybuffer.shape[1]; __pyx_pybuffernd_p_dP.diminfo[2].strides = __pyx_pybuffernd_p_dP.rcbuffer->pybuffer.strides[2]; __pyx_pybuffernd_p_dP.diminfo[2].shape = __pyx_pybuffernd_p_dP.rcbuffer->pybuffer.shape[2]; - /* "GPy/models/state_space_cython.pyx":731 + /* "GPy/models/state_space_cython.pyx":768 * """ * * cdef np.ndarray[DTYPE_t, ndim=2] m_pred = p_m # from prediction step # <<<<<<<<<<<<<< @@ -15365,14 +20006,14 @@ static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_2_kalman_update_step __Pyx_BufFmt_StackElem __pyx_stack[1]; if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_m_pred.rcbuffer->pybuffer, (PyObject*)((PyArrayObject *)__pyx_v_p_m), &__Pyx_TypeInfo_nn___pyx_t_3GPy_6models_18state_space_cython_DTYPE_t, PyBUF_FORMAT| PyBUF_STRIDES, 2, 0, __pyx_stack) == -1)) { __pyx_v_m_pred = ((PyArrayObject *)Py_None); __Pyx_INCREF(Py_None); __pyx_pybuffernd_m_pred.rcbuffer->pybuffer.buf = NULL; - {__pyx_filename = __pyx_f[0]; __pyx_lineno = 731; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __PYX_ERR(0, 768, __pyx_L1_error) } else {__pyx_pybuffernd_m_pred.diminfo[0].strides = __pyx_pybuffernd_m_pred.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_m_pred.diminfo[0].shape = __pyx_pybuffernd_m_pred.rcbuffer->pybuffer.shape[0]; __pyx_pybuffernd_m_pred.diminfo[1].strides = __pyx_pybuffernd_m_pred.rcbuffer->pybuffer.strides[1]; __pyx_pybuffernd_m_pred.diminfo[1].shape = __pyx_pybuffernd_m_pred.rcbuffer->pybuffer.shape[1]; } } __Pyx_INCREF(((PyObject *)__pyx_v_p_m)); __pyx_v_m_pred = ((PyArrayObject *)__pyx_v_p_m); - /* "GPy/models/state_space_cython.pyx":733 + /* "GPy/models/state_space_cython.pyx":770 * cdef np.ndarray[DTYPE_t, ndim=2] m_pred = p_m # from prediction step * #P_pred,S_pred,V_pred = p_P # from prediction step * cdef np.ndarray[DTYPE_t, ndim=2] P_pred = p_P[0] # <<<<<<<<<<<<<< @@ -15381,23 +20022,23 @@ static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_2_kalman_update_step */ if (unlikely(__pyx_v_p_P == Py_None)) { PyErr_SetString(PyExc_TypeError, "'NoneType' object is not subscriptable"); - {__pyx_filename = __pyx_f[0]; __pyx_lineno = 733; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __PYX_ERR(0, 770, __pyx_L1_error) } - if (!(likely(((PyTuple_GET_ITEM(__pyx_v_p_P, 0)) == Py_None) || likely(__Pyx_TypeTest(PyTuple_GET_ITEM(__pyx_v_p_P, 0), __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 733; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (!(likely(((PyTuple_GET_ITEM(__pyx_v_p_P, 0)) == Py_None) || likely(__Pyx_TypeTest(PyTuple_GET_ITEM(__pyx_v_p_P, 0), __pyx_ptype_5numpy_ndarray))))) __PYX_ERR(0, 770, __pyx_L1_error) __pyx_t_1 = PyTuple_GET_ITEM(__pyx_v_p_P, 0); __Pyx_INCREF(__pyx_t_1); { __Pyx_BufFmt_StackElem __pyx_stack[1]; if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_P_pred.rcbuffer->pybuffer, (PyObject*)((PyArrayObject *)__pyx_t_1), &__Pyx_TypeInfo_nn___pyx_t_3GPy_6models_18state_space_cython_DTYPE_t, PyBUF_FORMAT| PyBUF_STRIDES, 2, 0, __pyx_stack) == -1)) { __pyx_v_P_pred = ((PyArrayObject *)Py_None); __Pyx_INCREF(Py_None); __pyx_pybuffernd_P_pred.rcbuffer->pybuffer.buf = NULL; - {__pyx_filename = __pyx_f[0]; __pyx_lineno = 733; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __PYX_ERR(0, 770, __pyx_L1_error) } else {__pyx_pybuffernd_P_pred.diminfo[0].strides = __pyx_pybuffernd_P_pred.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_P_pred.diminfo[0].shape = __pyx_pybuffernd_P_pred.rcbuffer->pybuffer.shape[0]; __pyx_pybuffernd_P_pred.diminfo[1].strides = __pyx_pybuffernd_P_pred.rcbuffer->pybuffer.strides[1]; __pyx_pybuffernd_P_pred.diminfo[1].shape = __pyx_pybuffernd_P_pred.rcbuffer->pybuffer.shape[1]; } } __pyx_v_P_pred = ((PyArrayObject *)__pyx_t_1); __pyx_t_1 = 0; - /* "GPy/models/state_space_cython.pyx":734 + /* "GPy/models/state_space_cython.pyx":771 * #P_pred,S_pred,V_pred = p_P # from prediction step * cdef np.ndarray[DTYPE_t, ndim=2] P_pred = p_P[0] * cdef np.ndarray[DTYPE_t, ndim=1] S_pred = p_P[1] # <<<<<<<<<<<<<< @@ -15406,23 +20047,23 @@ static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_2_kalman_update_step */ if (unlikely(__pyx_v_p_P == Py_None)) { PyErr_SetString(PyExc_TypeError, "'NoneType' object is not subscriptable"); - {__pyx_filename = __pyx_f[0]; __pyx_lineno = 734; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __PYX_ERR(0, 771, __pyx_L1_error) } - if (!(likely(((PyTuple_GET_ITEM(__pyx_v_p_P, 1)) == Py_None) || likely(__Pyx_TypeTest(PyTuple_GET_ITEM(__pyx_v_p_P, 1), __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 734; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (!(likely(((PyTuple_GET_ITEM(__pyx_v_p_P, 1)) == Py_None) || likely(__Pyx_TypeTest(PyTuple_GET_ITEM(__pyx_v_p_P, 1), __pyx_ptype_5numpy_ndarray))))) __PYX_ERR(0, 771, __pyx_L1_error) __pyx_t_1 = PyTuple_GET_ITEM(__pyx_v_p_P, 1); __Pyx_INCREF(__pyx_t_1); { __Pyx_BufFmt_StackElem __pyx_stack[1]; if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_S_pred.rcbuffer->pybuffer, (PyObject*)((PyArrayObject *)__pyx_t_1), &__Pyx_TypeInfo_nn___pyx_t_3GPy_6models_18state_space_cython_DTYPE_t, PyBUF_FORMAT| PyBUF_STRIDES, 1, 0, __pyx_stack) == -1)) { __pyx_v_S_pred = ((PyArrayObject *)Py_None); __Pyx_INCREF(Py_None); __pyx_pybuffernd_S_pred.rcbuffer->pybuffer.buf = NULL; - {__pyx_filename = __pyx_f[0]; __pyx_lineno = 734; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __PYX_ERR(0, 771, __pyx_L1_error) } else {__pyx_pybuffernd_S_pred.diminfo[0].strides = __pyx_pybuffernd_S_pred.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_S_pred.diminfo[0].shape = __pyx_pybuffernd_S_pred.rcbuffer->pybuffer.shape[0]; } } __pyx_v_S_pred = ((PyArrayObject *)__pyx_t_1); __pyx_t_1 = 0; - /* "GPy/models/state_space_cython.pyx":735 + /* "GPy/models/state_space_cython.pyx":772 * cdef np.ndarray[DTYPE_t, ndim=2] P_pred = p_P[0] * cdef np.ndarray[DTYPE_t, ndim=1] S_pred = p_P[1] * cdef np.ndarray[DTYPE_t, ndim=2] V_pred = p_P[2] # <<<<<<<<<<<<<< @@ -15431,38 +20072,38 @@ static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_2_kalman_update_step */ if (unlikely(__pyx_v_p_P == Py_None)) { PyErr_SetString(PyExc_TypeError, "'NoneType' object is not subscriptable"); - {__pyx_filename = __pyx_f[0]; __pyx_lineno = 735; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __PYX_ERR(0, 772, __pyx_L1_error) } - if (!(likely(((PyTuple_GET_ITEM(__pyx_v_p_P, 2)) == Py_None) || likely(__Pyx_TypeTest(PyTuple_GET_ITEM(__pyx_v_p_P, 2), __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 735; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (!(likely(((PyTuple_GET_ITEM(__pyx_v_p_P, 2)) == Py_None) || likely(__Pyx_TypeTest(PyTuple_GET_ITEM(__pyx_v_p_P, 2), __pyx_ptype_5numpy_ndarray))))) __PYX_ERR(0, 772, __pyx_L1_error) __pyx_t_1 = PyTuple_GET_ITEM(__pyx_v_p_P, 2); __Pyx_INCREF(__pyx_t_1); { __Pyx_BufFmt_StackElem __pyx_stack[1]; if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_V_pred.rcbuffer->pybuffer, (PyObject*)((PyArrayObject *)__pyx_t_1), &__Pyx_TypeInfo_nn___pyx_t_3GPy_6models_18state_space_cython_DTYPE_t, PyBUF_FORMAT| PyBUF_STRIDES, 2, 0, __pyx_stack) == -1)) { __pyx_v_V_pred = ((PyArrayObject *)Py_None); __Pyx_INCREF(Py_None); __pyx_pybuffernd_V_pred.rcbuffer->pybuffer.buf = NULL; - {__pyx_filename = __pyx_f[0]; __pyx_lineno = 735; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __PYX_ERR(0, 772, __pyx_L1_error) } else {__pyx_pybuffernd_V_pred.diminfo[0].strides = __pyx_pybuffernd_V_pred.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_V_pred.diminfo[0].shape = __pyx_pybuffernd_V_pred.rcbuffer->pybuffer.shape[0]; __pyx_pybuffernd_V_pred.diminfo[1].strides = __pyx_pybuffernd_V_pred.rcbuffer->pybuffer.strides[1]; __pyx_pybuffernd_V_pred.diminfo[1].shape = __pyx_pybuffernd_V_pred.rcbuffer->pybuffer.shape[1]; } } __pyx_v_V_pred = ((PyArrayObject *)__pyx_t_1); __pyx_t_1 = 0; - /* "GPy/models/state_space_cython.pyx":737 + /* "GPy/models/state_space_cython.pyx":774 * cdef np.ndarray[DTYPE_t, ndim=2] V_pred = p_P[2] * * cdef np.ndarray[DTYPE_t, ndim=2] H = p_measurement_callables.Hk(k, m_pred, P_pred) # <<<<<<<<<<<<<< * cdef np.ndarray[DTYPE_t, ndim=2] R = p_measurement_callables.Rk(k) * cdef np.ndarray[DTYPE_t, ndim=2] R_isr =p_measurement_callables.R_isrk(k) # square root of the inverse of R matrix */ - __pyx_t_1 = ((struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *)__pyx_v_p_measurement_callables->__pyx_vtab)->Hk(__pyx_v_p_measurement_callables, __pyx_v_k, ((PyArrayObject *)__pyx_v_m_pred), ((PyArrayObject *)__pyx_v_P_pred), 0); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 737; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = ((struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *)__pyx_v_p_measurement_callables->__pyx_vtab)->Hk(__pyx_v_p_measurement_callables, __pyx_v_k, ((PyArrayObject *)__pyx_v_m_pred), ((PyArrayObject *)__pyx_v_P_pred), 0); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 774, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_1); - if (!(likely(((__pyx_t_1) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_1, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 737; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (!(likely(((__pyx_t_1) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_1, __pyx_ptype_5numpy_ndarray))))) __PYX_ERR(0, 774, __pyx_L1_error) __pyx_t_2 = ((PyArrayObject *)__pyx_t_1); { __Pyx_BufFmt_StackElem __pyx_stack[1]; if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_H.rcbuffer->pybuffer, (PyObject*)__pyx_t_2, &__Pyx_TypeInfo_nn___pyx_t_3GPy_6models_18state_space_cython_DTYPE_t, PyBUF_FORMAT| PyBUF_STRIDES, 2, 0, __pyx_stack) == -1)) { __pyx_v_H = ((PyArrayObject *)Py_None); __Pyx_INCREF(Py_None); __pyx_pybuffernd_H.rcbuffer->pybuffer.buf = NULL; - {__pyx_filename = __pyx_f[0]; __pyx_lineno = 737; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __PYX_ERR(0, 774, __pyx_L1_error) } else {__pyx_pybuffernd_H.diminfo[0].strides = __pyx_pybuffernd_H.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_H.diminfo[0].shape = __pyx_pybuffernd_H.rcbuffer->pybuffer.shape[0]; __pyx_pybuffernd_H.diminfo[1].strides = __pyx_pybuffernd_H.rcbuffer->pybuffer.strides[1]; __pyx_pybuffernd_H.diminfo[1].shape = __pyx_pybuffernd_H.rcbuffer->pybuffer.shape[1]; } } @@ -15470,22 +20111,22 @@ static PyObject *__pyx_pf_3GPy_6models_18state_space_cython_2_kalman_update_step __pyx_v_H = ((PyArrayObject *)__pyx_t_1); __pyx_t_1 = 0; - /* "GPy/models/state_space_cython.pyx":738 + /* "GPy/models/state_space_cython.pyx":775 * * cdef np.ndarray[DTYPE_t, ndim=2] H = p_measurement_callables.Hk(k, m_pred, P_pred) * cdef np.ndarray[DTYPE_t, ndim=2] R = p_measurement_callables.Rk(k) # <<<<<<<<<<<<<< * cdef np.ndarray[DTYPE_t, ndim=2] R_isr =p_measurement_callables.R_isrk(k) # square root of the inverse of R matrix * */ - __pyx_t_1 = ((struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *)__pyx_v_p_measurement_callables->__pyx_vtab)->Rk(__pyx_v_p_measurement_callables, __pyx_v_k, 0); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 738; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = ((struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *)__pyx_v_p_measurement_callables->__pyx_vtab)->Rk(__pyx_v_p_measurement_callables, __pyx_v_k, 0); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 775, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_1); - if (!(likely(((__pyx_t_1) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_1, __pyx_ptype_5numpy_ndarray))))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 738; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (!(likely(((__pyx_t_1) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_1, __pyx_ptype_5numpy_ndarray))))) __PYX_ERR(0, 775, __pyx_L1_error) __pyx_t_3 = ((PyArrayObject *)__pyx_t_1); { __Pyx_BufFmt_StackElem __pyx_stack[1]; if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_R.rcbuffer->pybuffer, (PyObject*)__pyx_t_3, &__Pyx_TypeInfo_nn___pyx_t_3GPy_6models_18state_space_cython_DTYPE_t, PyBUF_FORMAT| PyBUF_STRIDES, 2, 0, __pyx_stack) == -1)) { __pyx_v_R = ((PyArrayObject *)Py_None); 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PyArrayObject *__pyx_v_dm_init = 0; PyArrayObject *__pyx_v_dP_init = 0; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; PyObject *__pyx_r = 0; __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("_cont_discr_kalman_filter_raw_Cython (wrapper)", 0); @@ -18623,7 +23601,7 @@ static PyObject *__pyx_pw_3GPy_6models_18state_space_cython_5_cont_discr_kalman_ static PyObject **__pyx_pyargnames[] = {&__pyx_n_s_state_dim,&__pyx_n_s_p_dynamic_callables,&__pyx_n_s_p_measurement_callables,&__pyx_n_s_X,&__pyx_n_s_Y,&__pyx_n_s_m_init,&__pyx_n_s_P_init,&__pyx_n_s_p_kalman_filter_type,&__pyx_n_s_calc_log_likelihood,&__pyx_n_s_calc_grad_log_likelihood,&__pyx_n_s_grad_params_no,&__pyx_n_s_dm_init,&__pyx_n_s_dP_init,0}; PyObject* values[13] = {0,0,0,0,0,0,0,0,0,0,0,0,0}; - /* "GPy/models/state_space_cython.pyx":877 + /* "GPy/models/state_space_cython.pyx":914 * def _cont_discr_kalman_filter_raw_Cython(int state_dim, Dynamic_Callables_Cython p_dynamic_callables, * Measurement_Callables_Cython p_measurement_callables, X, Y, * np.ndarray[DTYPE_t, ndim=2] m_init=None, np.ndarray[DTYPE_t, ndim=2] P_init=None, # <<<<<<<<<<<<<< @@ -18634,7 +23612,7 @@ static PyObject *__pyx_pw_3GPy_6models_18state_space_cython_5_cont_discr_kalman_ values[6] = (PyObject *)((PyArrayObject *)Py_None); values[7] = ((PyObject *)__pyx_n_s_regular); - /* "GPy/models/state_space_cython.pyx":882 + /* "GPy/models/state_space_cython.pyx":919 * bint calc_grad_log_likelihood=False, * int grad_params_no=0, * np.ndarray[DTYPE_t, ndim=3] dm_init=None, # <<<<<<<<<<<<<< @@ -18643,7 +23621,7 @@ static PyObject *__pyx_pw_3GPy_6models_18state_space_cython_5_cont_discr_kalman_ */ values[11] = (PyObject *)((PyArrayObject *)Py_None); - /* "GPy/models/state_space_cython.pyx":883 + /* "GPy/models/state_space_cython.pyx":920 * int grad_params_no=0, * np.ndarray[DTYPE_t, ndim=3] dm_init=None, * np.ndarray[DTYPE_t, ndim=3] dP_init=None): # <<<<<<<<<<<<<< @@ -18656,100 +23634,133 @@ static PyObject *__pyx_pw_3GPy_6models_18state_space_cython_5_cont_discr_kalman_ const Py_ssize_t pos_args = PyTuple_GET_SIZE(__pyx_args); switch (pos_args) { case 13: values[12] = PyTuple_GET_ITEM(__pyx_args, 12); + CYTHON_FALLTHROUGH; case 12: values[11] = PyTuple_GET_ITEM(__pyx_args, 11); + CYTHON_FALLTHROUGH; case 11: values[10] = PyTuple_GET_ITEM(__pyx_args, 10); + CYTHON_FALLTHROUGH; case 10: values[9] = PyTuple_GET_ITEM(__pyx_args, 9); + CYTHON_FALLTHROUGH; case 9: values[8] = PyTuple_GET_ITEM(__pyx_args, 8); + CYTHON_FALLTHROUGH; case 8: values[7] = PyTuple_GET_ITEM(__pyx_args, 7); + CYTHON_FALLTHROUGH; case 7: values[6] = PyTuple_GET_ITEM(__pyx_args, 6); + CYTHON_FALLTHROUGH; case 6: values[5] = PyTuple_GET_ITEM(__pyx_args, 5); + CYTHON_FALLTHROUGH; case 5: values[4] = PyTuple_GET_ITEM(__pyx_args, 4); + CYTHON_FALLTHROUGH; case 4: values[3] = PyTuple_GET_ITEM(__pyx_args, 3); + CYTHON_FALLTHROUGH; case 3: values[2] = PyTuple_GET_ITEM(__pyx_args, 2); + CYTHON_FALLTHROUGH; case 2: values[1] = PyTuple_GET_ITEM(__pyx_args, 1); + CYTHON_FALLTHROUGH; case 1: values[0] = PyTuple_GET_ITEM(__pyx_args, 0); + CYTHON_FALLTHROUGH; case 0: break; default: goto __pyx_L5_argtuple_error; } kw_args = PyDict_Size(__pyx_kwds); switch (pos_args) { case 0: - if (likely((values[0] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_state_dim)) != 0)) kw_args--; + if (likely((values[0] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_state_dim)) != 0)) kw_args--; 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goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("_cont_discr_kalman_filter_raw_Cython", 0, 5, 13, 2); __PYX_ERR(0, 912, __pyx_L3_error) } + CYTHON_FALLTHROUGH; case 3: - if (likely((values[3] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_X)) != 0)) kw_args--; + if (likely((values[3] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_X)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("_cont_discr_kalman_filter_raw_Cython", 0, 5, 13, 3); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 875; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("_cont_discr_kalman_filter_raw_Cython", 0, 5, 13, 3); __PYX_ERR(0, 912, __pyx_L3_error) } + CYTHON_FALLTHROUGH; case 4: - if (likely((values[4] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_Y)) != 0)) kw_args--; + if (likely((values[4] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_Y)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("_cont_discr_kalman_filter_raw_Cython", 0, 5, 13, 4); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 875; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("_cont_discr_kalman_filter_raw_Cython", 0, 5, 13, 4); __PYX_ERR(0, 912, __pyx_L3_error) } + CYTHON_FALLTHROUGH; case 5: if (kw_args > 0) { - PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_m_init); + PyObject* value = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_m_init); if (value) { values[5] = value; kw_args--; } } + CYTHON_FALLTHROUGH; case 6: if (kw_args > 0) { - PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_P_init); + PyObject* value = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_P_init); if (value) { values[6] = value; kw_args--; } } + CYTHON_FALLTHROUGH; case 7: if (kw_args > 0) { - PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_p_kalman_filter_type); + PyObject* value = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_p_kalman_filter_type); if (value) { values[7] = value; kw_args--; } } + CYTHON_FALLTHROUGH; case 8: if (kw_args > 0) { - PyObject* value = PyDict_GetItem(__pyx_kwds, __pyx_n_s_calc_log_likelihood); 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+ PyObject* value = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_dP_init); if (value) { values[12] = value; kw_args--; } } } if (unlikely(kw_args > 0)) { - if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "_cont_discr_kalman_filter_raw_Cython") < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 875; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "_cont_discr_kalman_filter_raw_Cython") < 0)) __PYX_ERR(0, 912, __pyx_L3_error) } } else { switch (PyTuple_GET_SIZE(__pyx_args)) { case 13: values[12] = PyTuple_GET_ITEM(__pyx_args, 12); + CYTHON_FALLTHROUGH; case 12: values[11] = PyTuple_GET_ITEM(__pyx_args, 11); + CYTHON_FALLTHROUGH; case 11: values[10] = PyTuple_GET_ITEM(__pyx_args, 10); + CYTHON_FALLTHROUGH; case 10: values[9] = PyTuple_GET_ITEM(__pyx_args, 9); + CYTHON_FALLTHROUGH; case 9: values[8] = PyTuple_GET_ITEM(__pyx_args, 8); + CYTHON_FALLTHROUGH; case 8: values[7] = PyTuple_GET_ITEM(__pyx_args, 7); + CYTHON_FALLTHROUGH; case 7: values[6] = PyTuple_GET_ITEM(__pyx_args, 6); + CYTHON_FALLTHROUGH; case 6: values[5] = PyTuple_GET_ITEM(__pyx_args, 5); + CYTHON_FALLTHROUGH; case 5: values[4] = PyTuple_GET_ITEM(__pyx_args, 4); values[3] = PyTuple_GET_ITEM(__pyx_args, 3); values[2] = PyTuple_GET_ITEM(__pyx_args, 2); @@ -18759,7 +23770,7 @@ static PyObject *__pyx_pw_3GPy_6models_18state_space_cython_5_cont_discr_kalman_ default: goto __pyx_L5_argtuple_error; } } - __pyx_v_state_dim = __Pyx_PyInt_As_int(values[0]); if (unlikely((__pyx_v_state_dim == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 875; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_state_dim = __Pyx_PyInt_As_int(values[0]); if (unlikely((__pyx_v_state_dim == (int)-1) && PyErr_Occurred())) __PYX_ERR(0, 912, __pyx_L3_error) __pyx_v_p_dynamic_callables = ((struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *)values[1]); 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} if (values[9]) { - __pyx_v_calc_grad_log_likelihood = __Pyx_PyObject_IsTrue(values[9]); if (unlikely((__pyx_v_calc_grad_log_likelihood == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 880; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_calc_grad_log_likelihood = __Pyx_PyObject_IsTrue(values[9]); if (unlikely((__pyx_v_calc_grad_log_likelihood == (int)-1) && PyErr_Occurred())) __PYX_ERR(0, 917, __pyx_L3_error) } else { - /* "GPy/models/state_space_cython.pyx":880 + /* "GPy/models/state_space_cython.pyx":917 * p_kalman_filter_type='regular', * bint calc_log_likelihood=False, * bint calc_grad_log_likelihood=False, # <<<<<<<<<<<<<< @@ -18794,7 +23805,7 @@ static PyObject *__pyx_pw_3GPy_6models_18state_space_cython_5_cont_discr_kalman_ __pyx_v_calc_grad_log_likelihood = ((int)0); } if (values[10]) { - __pyx_v_grad_params_no = __Pyx_PyInt_As_int(values[10]); if (unlikely((__pyx_v_grad_params_no == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; 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- /* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":233 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":287 * for i in range(ndim): * info.strides[i] = PyArray_STRIDES(self)[i] * info.shape[i] = PyArray_DIMS(self)[i] # <<<<<<<<<<<<<< @@ -21126,20 +29213,28 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ (__pyx_v_info->shape[__pyx_v_i]) = (PyArray_DIMS(__pyx_v_self)[__pyx_v_i]); } - goto __pyx_L11; - } - /*else*/ { - /* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":235 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":280 + * info.buf = PyArray_DATA(self) + * info.ndim = ndim + * if sizeof(npy_intp) != sizeof(Py_ssize_t): # <<<<<<<<<<<<<< + * # Allocate new buffer for strides and shape info. + * # This is allocated as one block, strides first. + */ + goto __pyx_L9; + } + + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":289 * info.shape[i] = PyArray_DIMS(self)[i] * else: * info.strides = PyArray_STRIDES(self) # <<<<<<<<<<<<<< * info.shape = PyArray_DIMS(self) * info.suboffsets = NULL */ + /*else*/ { __pyx_v_info->strides = ((Py_ssize_t *)PyArray_STRIDES(__pyx_v_self)); - /* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":236 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":290 * else: * info.strides = PyArray_STRIDES(self) * info.shape = PyArray_DIMS(self) # <<<<<<<<<<<<<< @@ -21148,9 +29243,9 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ __pyx_v_info->shape = ((Py_ssize_t *)PyArray_DIMS(__pyx_v_self)); } - __pyx_L11:; + __pyx_L9:; - /* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":237 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":291 * info.strides = PyArray_STRIDES(self) * info.shape = PyArray_DIMS(self) * info.suboffsets = NULL # <<<<<<<<<<<<<< @@ -21159,7 +29254,7 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ __pyx_v_info->suboffsets = NULL; - /* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":238 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":292 * info.shape = PyArray_DIMS(self) * info.suboffsets = NULL * info.itemsize = PyArray_ITEMSIZE(self) # <<<<<<<<<<<<<< @@ -21168,7 +29263,7 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ __pyx_v_info->itemsize = PyArray_ITEMSIZE(__pyx_v_self); - /* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":239 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":293 * info.suboffsets = NULL * info.itemsize = PyArray_ITEMSIZE(self) * info.readonly = not PyArray_ISWRITEABLE(self) # <<<<<<<<<<<<<< @@ -21177,98 +29272,54 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ __pyx_v_info->readonly = (!(PyArray_ISWRITEABLE(__pyx_v_self) != 0)); - /* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":242 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":296 * * cdef int t * cdef char* f = NULL # <<<<<<<<<<<<<< - * cdef dtype descr = self.descr - * cdef list stack + * cdef dtype descr = PyArray_DESCR(self) + * cdef int offset */ __pyx_v_f = NULL; - /* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":243 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":297 * cdef int t * cdef char* f = NULL - * cdef dtype descr = self.descr # <<<<<<<<<<<<<< - * cdef list stack + * cdef dtype descr = PyArray_DESCR(self) # <<<<<<<<<<<<<< * cdef int offset + * */ - __pyx_t_3 = ((PyObject *)__pyx_v_self->descr); + __pyx_t_7 = PyArray_DESCR(__pyx_v_self); + __pyx_t_3 = ((PyObject *)__pyx_t_7); __Pyx_INCREF(__pyx_t_3); __pyx_v_descr = ((PyArray_Descr *)__pyx_t_3); __pyx_t_3 = 0; - /* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":247 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":300 * cdef int offset * - * cdef bint hasfields = PyDataType_HASFIELDS(descr) # <<<<<<<<<<<<<< + * info.obj = self # <<<<<<<<<<<<<< * - * if not hasfields and not copy_shape: + * if not PyDataType_HASFIELDS(descr): */ - __pyx_v_hasfields = PyDataType_HASFIELDS(__pyx_v_descr); + __Pyx_INCREF(((PyObject *)__pyx_v_self)); + __Pyx_GIVEREF(((PyObject *)__pyx_v_self)); + __Pyx_GOTREF(__pyx_v_info->obj); + __Pyx_DECREF(__pyx_v_info->obj); + __pyx_v_info->obj = ((PyObject *)__pyx_v_self); - /* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":249 - * cdef bint hasfields = PyDataType_HASFIELDS(descr) + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":302 + * info.obj = self * - * if not hasfields and not copy_shape: # <<<<<<<<<<<<<< - * # do not call releasebuffer - * info.obj = None - */ - __pyx_t_2 = ((!(__pyx_v_hasfields != 0)) != 0); 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+ goto __pyx_L1_error; + __pyx_L8_try_end:; + } + + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":1046 + * raise ImportError("numpy.core.umath failed to import") + * + * cdef inline int import_ufunc() except -1: # <<<<<<<<<<<<<< + * try: + * _import_umath() + */ + + /* function exit code */ + __pyx_r = 0; + goto __pyx_L0; + __pyx_L1_error:; + __Pyx_XDECREF(__pyx_t_5); + __Pyx_XDECREF(__pyx_t_6); + __Pyx_XDECREF(__pyx_t_7); + __Pyx_XDECREF(__pyx_t_8); + __Pyx_AddTraceback("numpy.import_ufunc", __pyx_clineno, __pyx_lineno, __pyx_filename); + __pyx_r = -1; + __pyx_L0:; + __Pyx_RefNannyFinishContext(); + return __pyx_r; +} static struct __pyx_vtabstruct_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython __pyx_vtable_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython; static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython(PyTypeObject *t, CYTHON_UNUSED PyObject *a, CYTHON_UNUSED PyObject *k) { @@ -22866,8 +31383,8 @@ static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_Dynamic_Callable } static void __pyx_tp_dealloc_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython(PyObject *o) { - #if PY_VERSION_HEX >= 0x030400a1 - if (unlikely(Py_TYPE(o)->tp_finalize) && (!PyType_IS_GC(Py_TYPE(o)) || !_PyGC_FINALIZED(o))) { + #if CYTHON_USE_TP_FINALIZE + if (unlikely(PyType_HasFeature(Py_TYPE(o), Py_TPFLAGS_HAVE_FINALIZE) && Py_TYPE(o)->tp_finalize) && (!PyType_IS_GC(Py_TYPE(o)) || !_PyGC_FINALIZED(o))) { if (PyObject_CallFinalizerFromDealloc(o)) return; } #endif @@ -22875,13 +31392,15 @@ static void __pyx_tp_dealloc_3GPy_6models_18state_space_cython_Dynamic_Callables } static PyMethodDef __pyx_methods_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython[] = { - {"f_a", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_1f_a, METH_VARARGS|METH_KEYWORDS, 0}, - {"Ak", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_3Ak, METH_VARARGS|METH_KEYWORDS, 0}, + {"f_a", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_1f_a, METH_VARARGS|METH_KEYWORDS, 0}, + {"Ak", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_3Ak, METH_VARARGS|METH_KEYWORDS, 0}, {"Qk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_5Qk, METH_O, 0}, {"Q_srk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_7Q_srk, METH_O, 0}, {"dAk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_9dAk, METH_O, 0}, {"dQk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_11dQk, METH_O, 0}, - {"reset", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_13reset, METH_VARARGS|METH_KEYWORDS, 0}, + {"reset", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_13reset, METH_VARARGS|METH_KEYWORDS, 0}, + {"__reduce_cython__", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_15__reduce_cython__, METH_NOARGS, 0}, + {"__setstate_cython__", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_17__setstate_cython__, METH_O, 0}, {0, 0, 0, 0} }; @@ -22896,8 +31415,9 @@ static PyTypeObject __pyx_type_3GPy_6models_18state_space_cython_Dynamic_Callabl 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ - #else - 0, /*reserved*/ + #endif + #if PY_MAJOR_VERSION >= 3 + 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ @@ -22958,8 +31478,8 @@ static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_Measurement_Call } static void __pyx_tp_dealloc_3GPy_6models_18state_space_cython_Measurement_Callables_Cython(PyObject *o) { - #if PY_VERSION_HEX >= 0x030400a1 - if (unlikely(Py_TYPE(o)->tp_finalize) && (!PyType_IS_GC(Py_TYPE(o)) || !_PyGC_FINALIZED(o))) { + #if CYTHON_USE_TP_FINALIZE + if (unlikely(PyType_HasFeature(Py_TYPE(o), Py_TPFLAGS_HAVE_FINALIZE) && Py_TYPE(o)->tp_finalize) && (!PyType_IS_GC(Py_TYPE(o)) || !_PyGC_FINALIZED(o))) { if (PyObject_CallFinalizerFromDealloc(o)) return; } #endif @@ -22967,13 +31487,15 @@ static void __pyx_tp_dealloc_3GPy_6models_18state_space_cython_Measurement_Calla } static PyMethodDef __pyx_methods_3GPy_6models_18state_space_cython_Measurement_Callables_Cython[] = { - {"f_h", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_1f_h, METH_VARARGS|METH_KEYWORDS, 0}, - {"Hk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_3Hk, METH_VARARGS|METH_KEYWORDS, 0}, + {"f_h", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_1f_h, METH_VARARGS|METH_KEYWORDS, 0}, + {"Hk", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_3Hk, METH_VARARGS|METH_KEYWORDS, 0}, {"Rk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_5Rk, METH_O, 0}, {"R_isrk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_7R_isrk, METH_O, 0}, {"dHk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_9dHk, METH_O, 0}, {"dRk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_11dRk, METH_O, 0}, - {"reset", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_13reset, METH_VARARGS|METH_KEYWORDS, 0}, + {"reset", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_13reset, METH_VARARGS|METH_KEYWORDS, 0}, + {"__reduce_cython__", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_15__reduce_cython__, METH_NOARGS, 0}, + {"__setstate_cython__", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_17__setstate_cython__, METH_O, 0}, {0, 0, 0, 0} }; @@ -22988,8 +31510,9 @@ static PyTypeObject __pyx_type_3GPy_6models_18state_space_cython_Measurement_Cal 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ - #else - 0, /*reserved*/ + #endif + #if PY_MAJOR_VERSION >= 3 + 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ @@ -23050,8 +31573,8 @@ static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_R_handling_Cytho static void __pyx_tp_dealloc_3GPy_6models_18state_space_cython_R_handling_Cython(PyObject *o) { struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython *p = (struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython *)o; - #if PY_VERSION_HEX >= 0x030400a1 - if (unlikely(Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) { + #if CYTHON_USE_TP_FINALIZE + if (unlikely(PyType_HasFeature(Py_TYPE(o), Py_TPFLAGS_HAVE_FINALIZE) && Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) { if (PyObject_CallFinalizerFromDealloc(o)) return; } #endif @@ -23060,7 +31583,7 @@ static void __pyx_tp_dealloc_3GPy_6models_18state_space_cython_R_handling_Cython Py_CLEAR(p->index); Py_CLEAR(p->dR); Py_CLEAR(p->R_square_root); - #if CYTHON_COMPILING_IN_CPYTHON + #if CYTHON_USE_TYPE_SLOTS if (PyType_IS_GC(Py_TYPE(o)->tp_base)) #endif PyObject_GC_Track(o); @@ -23072,13 +31595,13 @@ static int __pyx_tp_traverse_3GPy_6models_18state_space_cython_R_handling_Cython struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython *p = (struct __pyx_obj_3GPy_6models_18state_space_cython_R_handling_Cython *)o; e = ((likely(__pyx_ptype_3GPy_6models_18state_space_cython_Measurement_Callables_Cython)) ? ((__pyx_ptype_3GPy_6models_18state_space_cython_Measurement_Callables_Cython->tp_traverse) ? __pyx_ptype_3GPy_6models_18state_space_cython_Measurement_Callables_Cython->tp_traverse(o, v, a) : 0) : __Pyx_call_next_tp_traverse(o, v, a, __pyx_tp_traverse_3GPy_6models_18state_space_cython_R_handling_Cython)); if (e) return e; if (p->R) { - e = (*v)(((PyObject*)p->R), a); if (e) return e; + e = (*v)(((PyObject *)p->R), a); if (e) return e; } if (p->index) { - e = (*v)(((PyObject*)p->index), a); if (e) return e; + e = (*v)(((PyObject *)p->index), a); if (e) return e; } if (p->dR) { - e = (*v)(((PyObject*)p->dR), a); if (e) return e; + e = (*v)(((PyObject *)p->dR), a); if (e) return e; } if (p->R_square_root) { e = (*v)(p->R_square_root, a); if (e) return e; @@ -23109,6 +31632,8 @@ static PyMethodDef __pyx_methods_3GPy_6models_18state_space_cython_R_handling_Cy {"Rk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_17R_handling_Cython_3Rk, METH_O, 0}, {"dRk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_17R_handling_Cython_5dRk, METH_O, 0}, {"R_isrk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_17R_handling_Cython_7R_isrk, METH_O, __pyx_doc_3GPy_6models_18state_space_cython_17R_handling_Cython_6R_isrk}, + {"__reduce_cython__", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_17R_handling_Cython_9__reduce_cython__, METH_NOARGS, 0}, + {"__setstate_cython__", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_17R_handling_Cython_11__setstate_cython__, METH_O, 0}, {0, 0, 0, 0} }; @@ -23123,8 +31648,9 @@ static PyTypeObject __pyx_type_3GPy_6models_18state_space_cython_R_handling_Cyth 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ - #else - 0, /*reserved*/ + #endif + #if PY_MAJOR_VERSION >= 3 + 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ @@ -23183,8 +31709,8 @@ static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_Std_Measurement_ static void __pyx_tp_dealloc_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython(PyObject *o) { struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *p = (struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *)o; - #if PY_VERSION_HEX >= 0x030400a1 - if (unlikely(Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) { + #if CYTHON_USE_TP_FINALIZE + if (unlikely(PyType_HasFeature(Py_TYPE(o), Py_TPFLAGS_HAVE_FINALIZE) && Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) { if (PyObject_CallFinalizerFromDealloc(o)) return; } #endif @@ -23200,10 +31726,10 @@ static int __pyx_tp_traverse_3GPy_6models_18state_space_cython_Std_Measurement_C struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *p = (struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython *)o; e = __pyx_tp_traverse_3GPy_6models_18state_space_cython_R_handling_Cython(o, v, a); if (e) return e; if (p->H) { - e = (*v)(((PyObject*)p->H), a); if (e) return e; + e = (*v)(((PyObject *)p->H), a); if (e) return e; } if (p->dH) { - e = (*v)(((PyObject*)p->dH), a); if (e) return e; + e = (*v)(((PyObject *)p->dH), a); if (e) return e; } return 0; } @@ -23222,9 +31748,11 @@ static int __pyx_tp_clear_3GPy_6models_18state_space_cython_Std_Measurement_Call } static PyMethodDef __pyx_methods_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython[] = { - {"f_h", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_3f_h, METH_VARARGS|METH_KEYWORDS, __pyx_doc_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_2f_h}, - {"Hk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_5Hk, METH_VARARGS|METH_KEYWORDS, __pyx_doc_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_4Hk}, + {"f_h", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_3f_h, METH_VARARGS|METH_KEYWORDS, __pyx_doc_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_2f_h}, + {"Hk", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_5Hk, METH_VARARGS|METH_KEYWORDS, __pyx_doc_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_4Hk}, {"dHk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_7dHk, METH_O, 0}, + {"__reduce_cython__", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_9__reduce_cython__, METH_NOARGS, 0}, + {"__setstate_cython__", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_11__setstate_cython__, METH_O, 0}, {0, 0, 0, 0} }; @@ -23239,8 +31767,9 @@ static PyTypeObject __pyx_type_3GPy_6models_18state_space_cython_Std_Measurement 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ - #else - 0, /*reserved*/ + #endif + #if PY_MAJOR_VERSION >= 3 + 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ @@ -23301,8 +31830,8 @@ static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_Q_handling_Cytho static void __pyx_tp_dealloc_3GPy_6models_18state_space_cython_Q_handling_Cython(PyObject *o) { struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython *p = (struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython *)o; - #if PY_VERSION_HEX >= 0x030400a1 - if (unlikely(Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) { + #if CYTHON_USE_TP_FINALIZE + if (unlikely(PyType_HasFeature(Py_TYPE(o), Py_TPFLAGS_HAVE_FINALIZE) && Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) { if (PyObject_CallFinalizerFromDealloc(o)) return; } #endif @@ -23311,7 +31840,7 @@ static void __pyx_tp_dealloc_3GPy_6models_18state_space_cython_Q_handling_Cython Py_CLEAR(p->index); Py_CLEAR(p->dQ); Py_CLEAR(p->Q_square_root); - #if CYTHON_COMPILING_IN_CPYTHON + #if CYTHON_USE_TYPE_SLOTS if (PyType_IS_GC(Py_TYPE(o)->tp_base)) #endif PyObject_GC_Track(o); @@ -23323,13 +31852,13 @@ static int __pyx_tp_traverse_3GPy_6models_18state_space_cython_Q_handling_Cython struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython *p = (struct __pyx_obj_3GPy_6models_18state_space_cython_Q_handling_Cython *)o; e = ((likely(__pyx_ptype_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython)) ? ((__pyx_ptype_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython->tp_traverse) ? __pyx_ptype_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython->tp_traverse(o, v, a) : 0) : __Pyx_call_next_tp_traverse(o, v, a, __pyx_tp_traverse_3GPy_6models_18state_space_cython_Q_handling_Cython)); if (e) return e; if (p->Q) { - e = (*v)(((PyObject*)p->Q), a); if (e) return e; + e = (*v)(((PyObject *)p->Q), a); if (e) return e; } if (p->index) { - e = (*v)(((PyObject*)p->index), a); if (e) return e; + e = (*v)(((PyObject *)p->index), a); if (e) return e; } if (p->dQ) { - e = (*v)(((PyObject*)p->dQ), a); if (e) return e; + e = (*v)(((PyObject *)p->dQ), a); if (e) return e; } if (p->Q_square_root) { e = (*v)(p->Q_square_root, a); if (e) return e; @@ -23360,6 +31889,8 @@ static PyMethodDef __pyx_methods_3GPy_6models_18state_space_cython_Q_handling_Cy {"Qk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_17Q_handling_Cython_3Qk, METH_O, __pyx_doc_3GPy_6models_18state_space_cython_17Q_handling_Cython_2Qk}, {"dQk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_17Q_handling_Cython_5dQk, METH_O, 0}, {"Q_srk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_17Q_handling_Cython_7Q_srk, METH_O, __pyx_doc_3GPy_6models_18state_space_cython_17Q_handling_Cython_6Q_srk}, + {"__reduce_cython__", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_17Q_handling_Cython_9__reduce_cython__, METH_NOARGS, 0}, + {"__setstate_cython__", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_17Q_handling_Cython_11__setstate_cython__, METH_O, 0}, {0, 0, 0, 0} }; @@ -23374,8 +31905,9 @@ static PyTypeObject __pyx_type_3GPy_6models_18state_space_cython_Q_handling_Cyth 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ - #else - 0, /*reserved*/ + #endif + #if PY_MAJOR_VERSION >= 3 + 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ @@ -23434,8 +31966,8 @@ static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_Std_Dynamic_Call static void __pyx_tp_dealloc_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython(PyObject *o) { struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *p = (struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *)o; - #if PY_VERSION_HEX >= 0x030400a1 - if (unlikely(Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) { + #if CYTHON_USE_TP_FINALIZE + if (unlikely(PyType_HasFeature(Py_TYPE(o), Py_TPFLAGS_HAVE_FINALIZE) && Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) { if (PyObject_CallFinalizerFromDealloc(o)) return; } #endif @@ -23451,10 +31983,10 @@ static int __pyx_tp_traverse_3GPy_6models_18state_space_cython_Std_Dynamic_Calla struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *p = (struct __pyx_obj_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython *)o; e = __pyx_tp_traverse_3GPy_6models_18state_space_cython_Q_handling_Cython(o, v, a); if (e) return e; if (p->A) { - e = (*v)(((PyObject*)p->A), a); if (e) return e; + e = (*v)(((PyObject *)p->A), a); if (e) return e; } if (p->dA) { - e = (*v)(((PyObject*)p->dA), a); if (e) return e; + e = (*v)(((PyObject *)p->dA), a); if (e) return e; } return 0; } @@ -23473,10 +32005,12 @@ static int __pyx_tp_clear_3GPy_6models_18state_space_cython_Std_Dynamic_Callable } static PyMethodDef __pyx_methods_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython[] = { - {"f_a", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_3f_a, METH_VARARGS|METH_KEYWORDS, __pyx_doc_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_2f_a}, - {"Ak", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_5Ak, METH_VARARGS|METH_KEYWORDS, __pyx_doc_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_4Ak}, + {"f_a", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_3f_a, METH_VARARGS|METH_KEYWORDS, __pyx_doc_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_2f_a}, + {"Ak", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_5Ak, METH_VARARGS|METH_KEYWORDS, __pyx_doc_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_4Ak}, {"dAk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_7dAk, METH_O, 0}, - {"reset", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_9reset, METH_VARARGS|METH_KEYWORDS, __pyx_doc_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_8reset}, + {"reset", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_9reset, METH_VARARGS|METH_KEYWORDS, __pyx_doc_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_8reset}, + {"__reduce_cython__", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_11__reduce_cython__, METH_NOARGS, 0}, + {"__setstate_cython__", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_13__setstate_cython__, METH_O, 0}, {0, 0, 0, 0} }; @@ -23491,8 +32025,9 @@ static PyTypeObject __pyx_type_3GPy_6models_18state_space_cython_Std_Dynamic_Cal 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ - #else - 0, /*reserved*/ + #endif + #if PY_MAJOR_VERSION >= 3 + 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ @@ -23555,8 +32090,8 @@ static PyObject *__pyx_tp_new_3GPy_6models_18state_space_cython_AQcompute_batch_ static void __pyx_tp_dealloc_3GPy_6models_18state_space_cython_AQcompute_batch_Cython(PyObject *o) { struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *p = (struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *)o; - #if PY_VERSION_HEX >= 0x030400a1 - if (unlikely(Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) { + #if CYTHON_USE_TP_FINALIZE + if (unlikely(PyType_HasFeature(Py_TYPE(o), Py_TPFLAGS_HAVE_FINALIZE) && Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) { if (PyObject_CallFinalizerFromDealloc(o)) return; } #endif @@ -23576,19 +32111,19 @@ static int __pyx_tp_traverse_3GPy_6models_18state_space_cython_AQcompute_batch_C struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *p = (struct __pyx_obj_3GPy_6models_18state_space_cython_AQcompute_batch_Cython *)o; e = __pyx_tp_traverse_3GPy_6models_18state_space_cython_Q_handling_Cython(o, v, a); if (e) return e; if (p->As) { - e = (*v)(((PyObject*)p->As), a); if (e) return e; + e = (*v)(((PyObject *)p->As), a); if (e) return e; } if (p->Qs) { - e = (*v)(((PyObject*)p->Qs), a); if (e) return e; + e = (*v)(((PyObject *)p->Qs), a); if (e) return e; } if (p->dAs) { - e = (*v)(((PyObject*)p->dAs), a); if (e) return e; + e = (*v)(((PyObject *)p->dAs), a); if (e) return e; } if (p->dQs) { - e = (*v)(((PyObject*)p->dQs), a); if (e) return e; + e = (*v)(((PyObject *)p->dQs), a); if (e) return e; } if (p->reconstruct_indices) { - e = (*v)(((PyObject*)p->reconstruct_indices), a); if (e) return e; + e = (*v)(((PyObject *)p->reconstruct_indices), a); if (e) return e; } if (p->Q_svd_dict) { e = (*v)(p->Q_svd_dict, a); if (e) return e; @@ -23622,13 +32157,16 @@ static int __pyx_tp_clear_3GPy_6models_18state_space_cython_AQcompute_batch_Cyth } static PyMethodDef __pyx_methods_3GPy_6models_18state_space_cython_AQcompute_batch_Cython[] = { - {"f_a", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_3f_a, METH_VARARGS|METH_KEYWORDS, __pyx_doc_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_2f_a}, - {"reset", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_5reset, METH_VARARGS|METH_KEYWORDS, __pyx_doc_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_4reset}, - {"Ak", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_7Ak, METH_VARARGS|METH_KEYWORDS, 0}, + {"f_a", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_3f_a, METH_VARARGS|METH_KEYWORDS, __pyx_doc_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_2f_a}, + {"reset", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_5reset, METH_VARARGS|METH_KEYWORDS, __pyx_doc_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_4reset}, + {"Ak", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_7Ak, METH_VARARGS|METH_KEYWORDS, 0}, {"Qk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_9Qk, METH_O, 0}, {"dAk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_11dAk, METH_O, 0}, {"dQk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_13dQk, METH_O, 0}, {"Q_srk", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_15Q_srk, METH_O, __pyx_doc_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_14Q_srk}, + {"Q_inverse", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_17Q_inverse, METH_VARARGS|METH_KEYWORDS, __pyx_doc_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_16Q_inverse}, + {"__reduce_cython__", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_19__reduce_cython__, METH_NOARGS, 0}, + {"__setstate_cython__", (PyCFunction)__pyx_pw_3GPy_6models_18state_space_cython_22AQcompute_batch_Cython_21__setstate_cython__, METH_O, 0}, {0, 0, 0, 0} }; @@ -23643,8 +32181,9 @@ static PyTypeObject __pyx_type_3GPy_6models_18state_space_cython_AQcompute_batch 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ - #else - 0, /*reserved*/ + #endif + #if PY_MAJOR_VERSION >= 3 + 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ @@ -23694,39 +32233,73 @@ static PyMethodDef __pyx_methods[] = { }; #if PY_MAJOR_VERSION >= 3 +#if CYTHON_PEP489_MULTI_PHASE_INIT +static PyObject* __pyx_pymod_create(PyObject *spec, PyModuleDef *def); /*proto*/ +static int __pyx_pymod_exec_state_space_cython(PyObject* module); /*proto*/ +static PyModuleDef_Slot __pyx_moduledef_slots[] = { + {Py_mod_create, (void*)__pyx_pymod_create}, + {Py_mod_exec, (void*)__pyx_pymod_exec_state_space_cython}, + {0, NULL} +}; +#endif + static struct PyModuleDef __pyx_moduledef = { - #if PY_VERSION_HEX < 0x03020000 - { PyObject_HEAD_INIT(NULL) NULL, 0, NULL }, - #else PyModuleDef_HEAD_INIT, - #endif "state_space_cython", __pyx_k_Contains_some_cython_code_for_s, /* m_doc */ + #if CYTHON_PEP489_MULTI_PHASE_INIT + 0, /* m_size */ + #else -1, /* m_size */ + #endif __pyx_methods /* m_methods */, + #if CYTHON_PEP489_MULTI_PHASE_INIT + __pyx_moduledef_slots, /* m_slots */ + #else NULL, /* m_reload */ + #endif NULL, /* m_traverse */ NULL, /* m_clear */ NULL /* m_free */ }; #endif +#ifndef CYTHON_SMALL_CODE +#if defined(__clang__) + #define CYTHON_SMALL_CODE +#elif defined(__GNUC__) && (__GNUC__ > 4 || (__GNUC__ == 4 && __GNUC_MINOR__ >= 3)) + #define CYTHON_SMALL_CODE __attribute__((cold)) +#else + #define CYTHON_SMALL_CODE +#endif +#endif static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_n_s_A, __pyx_k_A, sizeof(__pyx_k_A), 0, 0, 1, 1}, + {&__pyx_n_s_AQcompute_batch_Cython, __pyx_k_AQcompute_batch_Cython, sizeof(__pyx_k_AQcompute_batch_Cython), 0, 0, 1, 1}, {&__pyx_n_s_A_time_var_index, __pyx_k_A_time_var_index, sizeof(__pyx_k_A_time_var_index), 0, 0, 1, 1}, {&__pyx_n_s_Ak, __pyx_k_Ak, sizeof(__pyx_k_Ak), 0, 0, 1, 1}, {&__pyx_n_s_As, __pyx_k_As, sizeof(__pyx_k_As), 0, 0, 1, 1}, {&__pyx_n_s_DTYPE, __pyx_k_DTYPE, sizeof(__pyx_k_DTYPE), 0, 0, 1, 1}, {&__pyx_n_s_DTYPE_int, __pyx_k_DTYPE_int, sizeof(__pyx_k_DTYPE_int), 0, 0, 1, 1}, + {&__pyx_n_s_Dynamic_Callables_Cython, __pyx_k_Dynamic_Callables_Cython, sizeof(__pyx_k_Dynamic_Callables_Cython), 0, 0, 1, 1}, {&__pyx_kp_u_Format_string_allocated_too_shor, __pyx_k_Format_string_allocated_too_shor, sizeof(__pyx_k_Format_string_allocated_too_shor), 0, 1, 0, 0}, {&__pyx_kp_u_Format_string_allocated_too_shor_2, __pyx_k_Format_string_allocated_too_shor_2, sizeof(__pyx_k_Format_string_allocated_too_shor_2), 0, 1, 0, 0}, {&__pyx_n_s_GPy_models_state_space_cython, __pyx_k_GPy_models_state_space_cython, sizeof(__pyx_k_GPy_models_state_space_cython), 0, 0, 1, 1}, + {&__pyx_kp_s_GPy_models_state_space_cython_py, __pyx_k_GPy_models_state_space_cython_py, sizeof(__pyx_k_GPy_models_state_space_cython_py), 0, 0, 1, 0}, {&__pyx_n_s_H, __pyx_k_H, sizeof(__pyx_k_H), 0, 0, 1, 1}, {&__pyx_n_s_H_time_var_index, __pyx_k_H_time_var_index, sizeof(__pyx_k_H_time_var_index), 0, 0, 1, 1}, {&__pyx_n_s_Hk, __pyx_k_Hk, sizeof(__pyx_k_Hk), 0, 0, 1, 1}, + {&__pyx_n_s_ImportError, __pyx_k_ImportError, sizeof(__pyx_k_ImportError), 0, 0, 1, 1}, + {&__pyx_kp_s_Incompatible_checksums_s_vs_0x14, __pyx_k_Incompatible_checksums_s_vs_0x14, sizeof(__pyx_k_Incompatible_checksums_s_vs_0x14), 0, 0, 1, 0}, + {&__pyx_kp_s_Incompatible_checksums_s_vs_0x70, __pyx_k_Incompatible_checksums_s_vs_0x70, sizeof(__pyx_k_Incompatible_checksums_s_vs_0x70), 0, 0, 1, 0}, + {&__pyx_kp_s_Incompatible_checksums_s_vs_0x77, __pyx_k_Incompatible_checksums_s_vs_0x77, sizeof(__pyx_k_Incompatible_checksums_s_vs_0x77), 0, 0, 1, 0}, + {&__pyx_kp_s_Incompatible_checksums_s_vs_0x9e, __pyx_k_Incompatible_checksums_s_vs_0x9e, sizeof(__pyx_k_Incompatible_checksums_s_vs_0x9e), 0, 0, 1, 0}, + {&__pyx_kp_s_Incompatible_checksums_s_vs_0xd4, __pyx_k_Incompatible_checksums_s_vs_0xd4, sizeof(__pyx_k_Incompatible_checksums_s_vs_0xd4), 0, 0, 1, 0}, + {&__pyx_kp_s_Incompatible_checksums_s_vs_0xdf, __pyx_k_Incompatible_checksums_s_vs_0xdf, sizeof(__pyx_k_Incompatible_checksums_s_vs_0xdf), 0, 0, 1, 0}, {&__pyx_n_s_K, __pyx_k_K, sizeof(__pyx_k_K), 0, 0, 1, 1}, {&__pyx_kp_s_Kalman_Filter_Update_SVD_S_is_ne, __pyx_k_Kalman_Filter_Update_SVD_S_is_ne, sizeof(__pyx_k_Kalman_Filter_Update_SVD_S_is_ne), 0, 0, 1, 0}, {&__pyx_n_s_M, __pyx_k_M, sizeof(__pyx_k_M), 0, 0, 1, 1}, + {&__pyx_n_s_Measurement_Callables_Cython, __pyx_k_Measurement_Callables_Cython, sizeof(__pyx_k_Measurement_Callables_Cython), 0, 0, 1, 1}, {&__pyx_kp_s_Measurement_dimension_larger_the, __pyx_k_Measurement_dimension_larger_the, sizeof(__pyx_k_Measurement_dimension_larger_the), 0, 0, 1, 0}, {&__pyx_kp_s_Nan_measurements_are_currently_n, __pyx_k_Nan_measurements_are_currently_n, sizeof(__pyx_k_Nan_measurements_are_currently_n), 0, 0, 1, 0}, {&__pyx_kp_s_Nan_values_in_likelihood_update, __pyx_k_Nan_values_in_likelihood_update, sizeof(__pyx_k_Nan_values_in_likelihood_update), 0, 0, 1, 0}, @@ -23736,14 +32309,20 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_n_s_P_init, __pyx_k_P_init, sizeof(__pyx_k_P_init), 0, 0, 1, 1}, {&__pyx_n_s_P_pred, __pyx_k_P_pred, sizeof(__pyx_k_P_pred), 0, 0, 1, 1}, {&__pyx_n_s_P_upd, __pyx_k_P_upd, sizeof(__pyx_k_P_upd), 0, 0, 1, 1}, + {&__pyx_n_s_PickleError, __pyx_k_PickleError, sizeof(__pyx_k_PickleError), 0, 0, 1, 1}, {&__pyx_n_s_Prev_cov, __pyx_k_Prev_cov, sizeof(__pyx_k_Prev_cov), 0, 0, 1, 1}, {&__pyx_n_s_Q, __pyx_k_Q, sizeof(__pyx_k_Q), 0, 0, 1, 1}, + {&__pyx_n_s_Q_handling_Cython, __pyx_k_Q_handling_Cython, sizeof(__pyx_k_Q_handling_Cython), 0, 0, 1, 1}, + {&__pyx_n_s_Q_inverse, __pyx_k_Q_inverse, sizeof(__pyx_k_Q_inverse), 0, 0, 1, 1}, + {&__pyx_n_s_Q_inverse_dict, __pyx_k_Q_inverse_dict, sizeof(__pyx_k_Q_inverse_dict), 0, 0, 1, 1}, + {&__pyx_n_s_Q_square_root_dict, __pyx_k_Q_square_root_dict, sizeof(__pyx_k_Q_square_root_dict), 0, 0, 1, 1}, {&__pyx_n_s_Q_sr, __pyx_k_Q_sr, sizeof(__pyx_k_Q_sr), 0, 0, 1, 1}, {&__pyx_n_s_Q_srk, __pyx_k_Q_srk, sizeof(__pyx_k_Q_srk), 0, 0, 1, 1}, {&__pyx_n_s_Q_time_var_index, __pyx_k_Q_time_var_index, sizeof(__pyx_k_Q_time_var_index), 0, 0, 1, 1}, {&__pyx_n_s_Qk, __pyx_k_Qk, sizeof(__pyx_k_Qk), 0, 0, 1, 1}, {&__pyx_n_s_Qs, __pyx_k_Qs, sizeof(__pyx_k_Qs), 0, 0, 1, 1}, {&__pyx_n_s_R, __pyx_k_R, sizeof(__pyx_k_R), 0, 0, 1, 1}, + {&__pyx_n_s_R_handling_Cython, __pyx_k_R_handling_Cython, sizeof(__pyx_k_R_handling_Cython), 0, 0, 1, 1}, {&__pyx_n_s_R_isr, __pyx_k_R_isr, sizeof(__pyx_k_R_isr), 0, 0, 1, 1}, {&__pyx_n_s_R_isrk, __pyx_k_R_isrk, sizeof(__pyx_k_R_isrk), 0, 0, 1, 1}, {&__pyx_n_s_R_time_var_index, __pyx_k_R_time_var_index, sizeof(__pyx_k_R_time_var_index), 0, 0, 1, 1}, @@ -23755,6 +32334,8 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_n_s_S_pred, __pyx_k_S_pred, sizeof(__pyx_k_S_pred), 0, 0, 1, 1}, {&__pyx_n_s_S_svd, __pyx_k_S_svd, sizeof(__pyx_k_S_svd), 0, 0, 1, 1}, {&__pyx_n_s_S_upd, __pyx_k_S_upd, sizeof(__pyx_k_S_upd), 0, 0, 1, 1}, + {&__pyx_n_s_Std_Dynamic_Callables_Cython, __pyx_k_Std_Dynamic_Callables_Cython, sizeof(__pyx_k_Std_Dynamic_Callables_Cython), 0, 0, 1, 1}, + {&__pyx_n_s_Std_Measurement_Callables_Cython, __pyx_k_Std_Measurement_Callables_Cython, sizeof(__pyx_k_Std_Measurement_Callables_Cython), 0, 0, 1, 1}, {&__pyx_n_s_T, __pyx_k_T, sizeof(__pyx_k_T), 0, 0, 1, 1}, {&__pyx_n_s_U, __pyx_k_U, sizeof(__pyx_k_U), 0, 0, 1, 1}, {&__pyx_n_s_U_upd, __pyx_k_U_upd, sizeof(__pyx_k_U_upd), 0, 0, 1, 1}, @@ -23771,6 +32352,7 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_n_s_calc_grad_log_likelihood, __pyx_k_calc_grad_log_likelihood, sizeof(__pyx_k_calc_grad_log_likelihood), 0, 0, 1, 1}, {&__pyx_n_s_calc_log_likelihood, __pyx_k_calc_log_likelihood, sizeof(__pyx_k_calc_log_likelihood), 0, 0, 1, 1}, {&__pyx_n_s_check_finite, __pyx_k_check_finite, sizeof(__pyx_k_check_finite), 0, 0, 1, 1}, + {&__pyx_n_s_cline_in_traceback, __pyx_k_cline_in_traceback, sizeof(__pyx_k_cline_in_traceback), 0, 0, 1, 1}, {&__pyx_n_s_compute_derivatives, __pyx_k_compute_derivatives, sizeof(__pyx_k_compute_derivatives), 0, 0, 1, 1}, {&__pyx_n_s_compute_uv, __pyx_k_compute_uv, sizeof(__pyx_k_compute_uv), 0, 0, 1, 1}, {&__pyx_n_s_cont_discr_kalman_filter_raw_Cy, __pyx_k_cont_discr_kalman_filter_raw_Cy, sizeof(__pyx_k_cont_discr_kalman_filter_raw_Cy), 0, 0, 1, 1}, @@ -23809,6 +32391,7 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_n_s_dS, __pyx_k_dS, sizeof(__pyx_k_dS), 0, 0, 1, 1}, {&__pyx_n_s_d_log_likelihood_update, __pyx_k_d_log_likelihood_update, sizeof(__pyx_k_d_log_likelihood_update), 0, 0, 1, 1}, {&__pyx_n_s_diag, __pyx_k_diag, sizeof(__pyx_k_diag), 0, 0, 1, 1}, + {&__pyx_n_s_dict, __pyx_k_dict, sizeof(__pyx_k_dict), 0, 0, 1, 1}, {&__pyx_n_s_dm_init, __pyx_k_dm_init, sizeof(__pyx_k_dm_init), 0, 0, 1, 1}, {&__pyx_n_s_dm_pred, __pyx_k_dm_pred, sizeof(__pyx_k_dm_pred), 0, 0, 1, 1}, {&__pyx_n_s_dm_pred_all_params, __pyx_k_dm_pred_all_params, sizeof(__pyx_k_dm_pred_all_params), 0, 0, 1, 1}, @@ -23821,6 +32404,7 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_n_s_f_h, __pyx_k_f_h, sizeof(__pyx_k_f_h), 0, 0, 1, 1}, {&__pyx_n_s_float64, __pyx_k_float64, sizeof(__pyx_k_float64), 0, 0, 1, 1}, {&__pyx_n_s_full_matrices, __pyx_k_full_matrices, sizeof(__pyx_k_full_matrices), 0, 0, 1, 1}, + {&__pyx_n_s_getstate, __pyx_k_getstate, sizeof(__pyx_k_getstate), 0, 0, 1, 1}, {&__pyx_n_s_grad_log_likelihood, __pyx_k_grad_log_likelihood, sizeof(__pyx_k_grad_log_likelihood), 0, 0, 1, 1}, {&__pyx_n_s_grad_params_no, __pyx_k_grad_params_no, sizeof(__pyx_k_grad_params_no), 0, 0, 1, 1}, {&__pyx_n_s_import, __pyx_k_import, sizeof(__pyx_k_import), 0, 0, 1, 1}, @@ -23829,6 +32413,7 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_n_s_int64, __pyx_k_int64, sizeof(__pyx_k_int64), 0, 0, 1, 1}, {&__pyx_n_s_isnan, __pyx_k_isnan, sizeof(__pyx_k_isnan), 0, 0, 1, 1}, {&__pyx_n_s_j, __pyx_k_j, sizeof(__pyx_k_j), 0, 0, 1, 1}, + {&__pyx_n_s_jitter, __pyx_k_jitter, sizeof(__pyx_k_jitter), 0, 0, 1, 1}, {&__pyx_n_s_k, __pyx_k_k, sizeof(__pyx_k_k), 0, 0, 1, 1}, {&__pyx_n_s_k_measurment, __pyx_k_k_measurment, sizeof(__pyx_k_k_measurment), 0, 0, 1, 1}, {&__pyx_n_s_kalman_prediction_step_SVD_Cyth, __pyx_k_kalman_prediction_step_SVD_Cyth, sizeof(__pyx_k_kalman_prediction_step_SVD_Cyth), 0, 0, 1, 1}, @@ -23844,11 +32429,15 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_n_s_main, __pyx_k_main, sizeof(__pyx_k_main), 0, 0, 1, 1}, {&__pyx_n_s_measurement, __pyx_k_measurement, sizeof(__pyx_k_measurement), 0, 0, 1, 1}, {&__pyx_n_s_measurement_dim_gt_one, __pyx_k_measurement_dim_gt_one, sizeof(__pyx_k_measurement_dim_gt_one), 0, 0, 1, 1}, + {&__pyx_n_s_name, __pyx_k_name, sizeof(__pyx_k_name), 0, 0, 1, 1}, {&__pyx_n_s_nbytes, __pyx_k_nbytes, sizeof(__pyx_k_nbytes), 0, 0, 1, 1}, {&__pyx_kp_u_ndarray_is_not_C_contiguous, __pyx_k_ndarray_is_not_C_contiguous, sizeof(__pyx_k_ndarray_is_not_C_contiguous), 0, 1, 0, 0}, {&__pyx_kp_u_ndarray_is_not_Fortran_contiguou, __pyx_k_ndarray_is_not_Fortran_contiguou, sizeof(__pyx_k_ndarray_is_not_Fortran_contiguou), 0, 1, 0, 0}, + {&__pyx_n_s_new, __pyx_k_new, sizeof(__pyx_k_new), 0, 0, 1, 1}, {&__pyx_n_s_np, __pyx_k_np, sizeof(__pyx_k_np), 0, 0, 1, 1}, {&__pyx_n_s_numpy, __pyx_k_numpy, sizeof(__pyx_k_numpy), 0, 0, 1, 1}, + {&__pyx_kp_s_numpy_core_multiarray_failed_to, __pyx_k_numpy_core_multiarray_failed_to, sizeof(__pyx_k_numpy_core_multiarray_failed_to), 0, 0, 1, 0}, + {&__pyx_kp_s_numpy_core_umath_failed_to_impor, __pyx_k_numpy_core_umath_failed_to_impor, sizeof(__pyx_k_numpy_core_umath_failed_to_impor), 0, 0, 1, 0}, {&__pyx_n_s_overwrite_a, __pyx_k_overwrite_a, sizeof(__pyx_k_overwrite_a), 0, 0, 1, 1}, {&__pyx_n_s_p_P, __pyx_k_p_P, sizeof(__pyx_k_p_P), 0, 0, 1, 1}, {&__pyx_n_s_p_dP, __pyx_k_p_dP, sizeof(__pyx_k_p_dP), 0, 0, 1, 1}, @@ -23862,20 +32451,39 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_n_s_param, __pyx_k_param, sizeof(__pyx_k_param), 0, 0, 1, 1}, {&__pyx_n_s_param_number, __pyx_k_param_number, sizeof(__pyx_k_param_number), 0, 0, 1, 1}, {&__pyx_n_s_pi, __pyx_k_pi, sizeof(__pyx_k_pi), 0, 0, 1, 1}, + {&__pyx_n_s_pickle, __pyx_k_pickle, sizeof(__pyx_k_pickle), 0, 0, 1, 1}, {&__pyx_n_s_prev_mean, __pyx_k_prev_mean, sizeof(__pyx_k_prev_mean), 0, 0, 1, 1}, + {&__pyx_n_s_pyx_PickleError, __pyx_k_pyx_PickleError, sizeof(__pyx_k_pyx_PickleError), 0, 0, 1, 1}, + {&__pyx_n_s_pyx_checksum, __pyx_k_pyx_checksum, sizeof(__pyx_k_pyx_checksum), 0, 0, 1, 1}, + {&__pyx_n_s_pyx_result, __pyx_k_pyx_result, sizeof(__pyx_k_pyx_result), 0, 0, 1, 1}, + {&__pyx_n_s_pyx_state, __pyx_k_pyx_state, sizeof(__pyx_k_pyx_state), 0, 0, 1, 1}, + {&__pyx_n_s_pyx_type, __pyx_k_pyx_type, sizeof(__pyx_k_pyx_type), 0, 0, 1, 1}, + {&__pyx_n_s_pyx_unpickle_AQcompute_batch_C, __pyx_k_pyx_unpickle_AQcompute_batch_C, sizeof(__pyx_k_pyx_unpickle_AQcompute_batch_C), 0, 0, 1, 1}, + {&__pyx_n_s_pyx_unpickle_Dynamic_Callables, __pyx_k_pyx_unpickle_Dynamic_Callables, sizeof(__pyx_k_pyx_unpickle_Dynamic_Callables), 0, 0, 1, 1}, + {&__pyx_n_s_pyx_unpickle_Measurement_Calla, __pyx_k_pyx_unpickle_Measurement_Calla, sizeof(__pyx_k_pyx_unpickle_Measurement_Calla), 0, 0, 1, 1}, + {&__pyx_n_s_pyx_unpickle_Q_handling_Cython, __pyx_k_pyx_unpickle_Q_handling_Cython, sizeof(__pyx_k_pyx_unpickle_Q_handling_Cython), 0, 0, 1, 1}, + {&__pyx_n_s_pyx_unpickle_R_handling_Cython, __pyx_k_pyx_unpickle_R_handling_Cython, sizeof(__pyx_k_pyx_unpickle_R_handling_Cython), 0, 0, 1, 1}, + {&__pyx_n_s_pyx_unpickle_Std_Dynamic_Calla, __pyx_k_pyx_unpickle_Std_Dynamic_Calla, sizeof(__pyx_k_pyx_unpickle_Std_Dynamic_Calla), 0, 0, 1, 1}, + {&__pyx_n_s_pyx_unpickle_Std_Measurement_C, __pyx_k_pyx_unpickle_Std_Measurement_C, sizeof(__pyx_k_pyx_unpickle_Std_Measurement_C), 0, 0, 1, 1}, {&__pyx_n_s_pyx_vtable, __pyx_k_pyx_vtable, sizeof(__pyx_k_pyx_vtable), 0, 0, 1, 1}, {&__pyx_n_s_range, __pyx_k_range, sizeof(__pyx_k_range), 0, 0, 1, 1}, {&__pyx_n_s_reconstruct_indices, __pyx_k_reconstruct_indices, sizeof(__pyx_k_reconstruct_indices), 0, 0, 1, 1}, + {&__pyx_n_s_reduce, __pyx_k_reduce, sizeof(__pyx_k_reduce), 0, 0, 1, 1}, + {&__pyx_n_s_reduce_cython, __pyx_k_reduce_cython, sizeof(__pyx_k_reduce_cython), 0, 0, 1, 1}, + {&__pyx_n_s_reduce_ex, __pyx_k_reduce_ex, sizeof(__pyx_k_reduce_ex), 0, 0, 1, 1}, {&__pyx_n_s_regular, __pyx_k_regular, sizeof(__pyx_k_regular), 0, 0, 1, 1}, {&__pyx_n_s_res, __pyx_k_res, sizeof(__pyx_k_res), 0, 0, 1, 1}, {&__pyx_n_s_reset, __pyx_k_reset, sizeof(__pyx_k_reset), 0, 0, 1, 1}, {&__pyx_n_s_ret, __pyx_k_ret, sizeof(__pyx_k_ret), 0, 0, 1, 1}, {&__pyx_n_s_scipy, __pyx_k_scipy, sizeof(__pyx_k_scipy), 0, 0, 1, 1}, + {&__pyx_n_s_setstate, __pyx_k_setstate, sizeof(__pyx_k_setstate), 0, 0, 1, 1}, + {&__pyx_n_s_setstate_cython, __pyx_k_setstate_cython, sizeof(__pyx_k_setstate_cython), 0, 0, 1, 1}, {&__pyx_n_s_shape, __pyx_k_shape, sizeof(__pyx_k_shape), 0, 0, 1, 1}, {&__pyx_n_s_sp, __pyx_k_sp, sizeof(__pyx_k_sp), 0, 0, 1, 1}, {&__pyx_n_s_sqrt, __pyx_k_sqrt, sizeof(__pyx_k_sqrt), 0, 0, 1, 1}, {&__pyx_n_s_state_dim, __pyx_k_state_dim, sizeof(__pyx_k_state_dim), 0, 0, 1, 1}, {&__pyx_n_s_steps_no, __pyx_k_steps_no, sizeof(__pyx_k_steps_no), 0, 0, 1, 1}, + {&__pyx_kp_s_stringsource, __pyx_k_stringsource, sizeof(__pyx_k_stringsource), 0, 0, 1, 0}, {&__pyx_n_s_sum, __pyx_k_sum, sizeof(__pyx_k_sum), 0, 0, 1, 1}, {&__pyx_n_s_super, __pyx_k_super, sizeof(__pyx_k_super), 0, 0, 1, 1}, {&__pyx_n_s_svd, __pyx_k_svd, sizeof(__pyx_k_svd), 0, 0, 1, 1}, @@ -23892,24 +32500,25 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_n_s_unique_Q_number, __pyx_k_unique_Q_number, sizeof(__pyx_k_unique_Q_number), 0, 0, 1, 1}, {&__pyx_n_s_unique_R_number, __pyx_k_unique_R_number, sizeof(__pyx_k_unique_R_number), 0, 0, 1, 1}, {&__pyx_kp_u_unknown_dtype_code_in_numpy_pxd, __pyx_k_unknown_dtype_code_in_numpy_pxd, sizeof(__pyx_k_unknown_dtype_code_in_numpy_pxd), 0, 1, 0, 0}, - {&__pyx_kp_s_users_agrigori_SpiderOak_sp_hiv, __pyx_k_users_agrigori_SpiderOak_sp_hiv, sizeof(__pyx_k_users_agrigori_SpiderOak_sp_hiv), 0, 0, 1, 0}, + {&__pyx_n_s_update, __pyx_k_update, sizeof(__pyx_k_update), 0, 0, 1, 1}, {&__pyx_n_s_v, __pyx_k_v, sizeof(__pyx_k_v), 0, 0, 1, 1}, {&__pyx_n_s_vstack, __pyx_k_vstack, sizeof(__pyx_k_vstack), 0, 0, 1, 1}, {&__pyx_n_s_zeros, __pyx_k_zeros, sizeof(__pyx_k_zeros), 0, 0, 1, 1}, {0, 0, 0, 0, 0, 0, 0} }; -static int __Pyx_InitCachedBuiltins(void) { - __pyx_builtin_NotImplemented = __Pyx_GetBuiltinName(__pyx_n_s_NotImplemented); if (!__pyx_builtin_NotImplemented) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 23; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_builtin_ValueError = __Pyx_GetBuiltinName(__pyx_n_s_ValueError); if (!__pyx_builtin_ValueError) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 124; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_builtin_super = __Pyx_GetBuiltinName(__pyx_n_s_super); if (!__pyx_builtin_super) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 177; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_builtin_range = __Pyx_GetBuiltinName(__pyx_n_s_range); if (!__pyx_builtin_range) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 627; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_builtin_RuntimeError = __Pyx_GetBuiltinName(__pyx_n_s_RuntimeError); if (!__pyx_builtin_RuntimeError) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 802; __pyx_clineno = __LINE__; goto __pyx_L1_error;} +static CYTHON_SMALL_CODE int __Pyx_InitCachedBuiltins(void) { + __pyx_builtin_NotImplemented = __Pyx_GetBuiltinName(__pyx_n_s_NotImplemented); if (!__pyx_builtin_NotImplemented) __PYX_ERR(0, 23, __pyx_L1_error) + __pyx_builtin_ValueError = __Pyx_GetBuiltinName(__pyx_n_s_ValueError); if (!__pyx_builtin_ValueError) __PYX_ERR(0, 124, __pyx_L1_error) + __pyx_builtin_super = __Pyx_GetBuiltinName(__pyx_n_s_super); if (!__pyx_builtin_super) __PYX_ERR(0, 177, __pyx_L1_error) + __pyx_builtin_range = __Pyx_GetBuiltinName(__pyx_n_s_range); if (!__pyx_builtin_range) __PYX_ERR(0, 664, __pyx_L1_error) + __pyx_builtin_RuntimeError = __Pyx_GetBuiltinName(__pyx_n_s_RuntimeError); if (!__pyx_builtin_RuntimeError) __PYX_ERR(2, 856, __pyx_L1_error) + __pyx_builtin_ImportError = __Pyx_GetBuiltinName(__pyx_n_s_ImportError); if (!__pyx_builtin_ImportError) __PYX_ERR(2, 1038, __pyx_L1_error) return 0; __pyx_L1_error:; return -1; } -static int __Pyx_InitCachedConstants(void) { +static CYTHON_SMALL_CODE int __Pyx_InitCachedConstants(void) { __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("__Pyx_InitCachedConstants", 0); @@ -23920,7 +32529,7 @@ static int __Pyx_InitCachedConstants(void) { * * cpdef Ak(self, int k, np.ndarray[DTYPE_t, ndim=2] m, np.ndarray[DTYPE_t, ndim=2] P): # returns state iteration matrix */ - __pyx_tuple_ = PyTuple_Pack(1, __pyx_kp_s_cython_f_a_is_not_implemented); if (unlikely(!__pyx_tuple_)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 23; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_tuple_ = PyTuple_Pack(1, __pyx_kp_s_cython_f_a_is_not_implemented); if (unlikely(!__pyx_tuple_)) __PYX_ERR(0, 23, __pyx_L1_error) __Pyx_GOTREF(__pyx_tuple_); __Pyx_GIVEREF(__pyx_tuple_); @@ -23931,7 +32540,7 @@ static int __Pyx_InitCachedConstants(void) { * * cpdef Qk(self, int k): */ - __pyx_tuple__2 = PyTuple_Pack(1, __pyx_kp_s_cython_Ak_is_not_implemented); if (unlikely(!__pyx_tuple__2)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 26; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_tuple__2 = PyTuple_Pack(1, __pyx_kp_s_cython_Ak_is_not_implemented); if (unlikely(!__pyx_tuple__2)) __PYX_ERR(0, 26, __pyx_L1_error) __Pyx_GOTREF(__pyx_tuple__2); __Pyx_GIVEREF(__pyx_tuple__2); @@ -23942,7 +32551,7 @@ static int __Pyx_InitCachedConstants(void) { * * cpdef Q_srk(self, int k): */ - __pyx_tuple__3 = PyTuple_Pack(1, __pyx_kp_s_cython_Qk_is_not_implemented); if (unlikely(!__pyx_tuple__3)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 29; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_tuple__3 = PyTuple_Pack(1, __pyx_kp_s_cython_Qk_is_not_implemented); if (unlikely(!__pyx_tuple__3)) __PYX_ERR(0, 29, __pyx_L1_error) __Pyx_GOTREF(__pyx_tuple__3); __Pyx_GIVEREF(__pyx_tuple__3); @@ -23953,7 +32562,7 @@ static int __Pyx_InitCachedConstants(void) { * * cpdef dAk(self, int k): */ - __pyx_tuple__4 = PyTuple_Pack(1, __pyx_kp_s_cython_Q_srk_is_not_implemented); if (unlikely(!__pyx_tuple__4)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 32; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_tuple__4 = PyTuple_Pack(1, __pyx_kp_s_cython_Q_srk_is_not_implemented); if (unlikely(!__pyx_tuple__4)) __PYX_ERR(0, 32, __pyx_L1_error) __Pyx_GOTREF(__pyx_tuple__4); __Pyx_GIVEREF(__pyx_tuple__4); @@ -23964,7 +32573,7 @@ static int __Pyx_InitCachedConstants(void) { * * cpdef dQk(self, int k): */ - __pyx_tuple__5 = PyTuple_Pack(1, __pyx_kp_s_cython_dAk_is_not_implemented); if (unlikely(!__pyx_tuple__5)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 35; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_tuple__5 = PyTuple_Pack(1, __pyx_kp_s_cython_dAk_is_not_implemented); if (unlikely(!__pyx_tuple__5)) __PYX_ERR(0, 35, __pyx_L1_error) __Pyx_GOTREF(__pyx_tuple__5); __Pyx_GIVEREF(__pyx_tuple__5); @@ -23975,7 +32584,7 @@ static int __Pyx_InitCachedConstants(void) { * * cpdef reset(self, bint compute_derivatives = False): */ - __pyx_tuple__6 = PyTuple_Pack(1, __pyx_kp_s_cython_dQk_is_not_implemented); if (unlikely(!__pyx_tuple__6)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 38; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_tuple__6 = PyTuple_Pack(1, __pyx_kp_s_cython_dQk_is_not_implemented); if (unlikely(!__pyx_tuple__6)) __PYX_ERR(0, 38, __pyx_L1_error) __Pyx_GOTREF(__pyx_tuple__6); __Pyx_GIVEREF(__pyx_tuple__6); @@ -23986,21 +32595,10 @@ static int __Pyx_InitCachedConstants(void) { * * # Template class for measurement callables */ - __pyx_tuple__7 = PyTuple_Pack(1, __pyx_kp_s_cython_reset_is_not_implemented); if 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- if (__Pyx_SetVtable(__pyx_type_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython.tp_dict, __pyx_vtabptr_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 21; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - if (PyObject_SetAttrString(__pyx_m, "Dynamic_Callables_Cython", (PyObject *)&__pyx_type_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 21; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if ((CYTHON_USE_TYPE_SLOTS && CYTHON_USE_PYTYPE_LOOKUP) && likely(!__pyx_type_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython.tp_dictoffset && __pyx_type_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython.tp_getattro == PyObject_GenericGetAttr)) { + __pyx_type_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython.tp_getattro = __Pyx_PyObject_GenericGetAttr; + } + if (__Pyx_SetVtable(__pyx_type_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython.tp_dict, __pyx_vtabptr_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython) < 0) __PYX_ERR(0, 21, __pyx_L1_error) + if (PyObject_SetAttr(__pyx_m, __pyx_n_s_Dynamic_Callables_Cython, (PyObject *)&__pyx_type_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython) < 0) __PYX_ERR(0, 21, __pyx_L1_error) + if (__Pyx_setup_reduce((PyObject*)&__pyx_type_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython) < 0) __PYX_ERR(0, 21, __pyx_L1_error) __pyx_ptype_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython = &__pyx_type_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython; __pyx_vtabptr_3GPy_6models_18state_space_cython_Measurement_Callables_Cython = &__pyx_vtable_3GPy_6models_18state_space_cython_Measurement_Callables_Cython; __pyx_vtable_3GPy_6models_18state_space_cython_Measurement_Callables_Cython.f_h = (PyObject *(*)(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *, int, PyArrayObject *, PyArrayObject *, int __pyx_skip_dispatch))__pyx_f_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_f_h; @@ -24901,10 +32954,14 @@ PyMODINIT_FUNC PyInit_state_space_cython(void) __pyx_vtable_3GPy_6models_18state_space_cython_Measurement_Callables_Cython.dHk = (PyObject *(*)(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *, int, int __pyx_skip_dispatch))__pyx_f_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_dHk; __pyx_vtable_3GPy_6models_18state_space_cython_Measurement_Callables_Cython.dRk = (PyObject *(*)(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *, int, int __pyx_skip_dispatch))__pyx_f_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_dRk; __pyx_vtable_3GPy_6models_18state_space_cython_Measurement_Callables_Cython.reset = (PyObject *(*)(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *, int __pyx_skip_dispatch, struct __pyx_opt_args_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_reset *__pyx_optional_args))__pyx_f_3GPy_6models_18state_space_cython_28Measurement_Callables_Cython_reset; - if (PyType_Ready(&__pyx_type_3GPy_6models_18state_space_cython_Measurement_Callables_Cython) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 44; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyType_Ready(&__pyx_type_3GPy_6models_18state_space_cython_Measurement_Callables_Cython) < 0) __PYX_ERR(0, 44, __pyx_L1_error) __pyx_type_3GPy_6models_18state_space_cython_Measurement_Callables_Cython.tp_print = 0; - if (__Pyx_SetVtable(__pyx_type_3GPy_6models_18state_space_cython_Measurement_Callables_Cython.tp_dict, __pyx_vtabptr_3GPy_6models_18state_space_cython_Measurement_Callables_Cython) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 44; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - if (PyObject_SetAttrString(__pyx_m, "Measurement_Callables_Cython", (PyObject *)&__pyx_type_3GPy_6models_18state_space_cython_Measurement_Callables_Cython) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 44; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if ((CYTHON_USE_TYPE_SLOTS && CYTHON_USE_PYTYPE_LOOKUP) && likely(!__pyx_type_3GPy_6models_18state_space_cython_Measurement_Callables_Cython.tp_dictoffset && __pyx_type_3GPy_6models_18state_space_cython_Measurement_Callables_Cython.tp_getattro == PyObject_GenericGetAttr)) { + __pyx_type_3GPy_6models_18state_space_cython_Measurement_Callables_Cython.tp_getattro = __Pyx_PyObject_GenericGetAttr; + } + if (__Pyx_SetVtable(__pyx_type_3GPy_6models_18state_space_cython_Measurement_Callables_Cython.tp_dict, __pyx_vtabptr_3GPy_6models_18state_space_cython_Measurement_Callables_Cython) < 0) __PYX_ERR(0, 44, __pyx_L1_error) + if (PyObject_SetAttr(__pyx_m, __pyx_n_s_Measurement_Callables_Cython, (PyObject *)&__pyx_type_3GPy_6models_18state_space_cython_Measurement_Callables_Cython) < 0) __PYX_ERR(0, 44, __pyx_L1_error) + if (__Pyx_setup_reduce((PyObject*)&__pyx_type_3GPy_6models_18state_space_cython_Measurement_Callables_Cython) < 0) __PYX_ERR(0, 44, __pyx_L1_error) __pyx_ptype_3GPy_6models_18state_space_cython_Measurement_Callables_Cython = &__pyx_type_3GPy_6models_18state_space_cython_Measurement_Callables_Cython; __pyx_vtabptr_3GPy_6models_18state_space_cython_R_handling_Cython = &__pyx_vtable_3GPy_6models_18state_space_cython_R_handling_Cython; __pyx_vtable_3GPy_6models_18state_space_cython_R_handling_Cython.__pyx_base = *__pyx_vtabptr_3GPy_6models_18state_space_cython_Measurement_Callables_Cython; @@ -24912,11 +32969,14 @@ PyMODINIT_FUNC PyInit_state_space_cython(void) __pyx_vtable_3GPy_6models_18state_space_cython_R_handling_Cython.__pyx_base.R_isrk = (PyObject *(*)(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *, int, int __pyx_skip_dispatch))__pyx_f_3GPy_6models_18state_space_cython_17R_handling_Cython_R_isrk; __pyx_vtable_3GPy_6models_18state_space_cython_R_handling_Cython.__pyx_base.dRk = (PyObject *(*)(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *, int, int __pyx_skip_dispatch))__pyx_f_3GPy_6models_18state_space_cython_17R_handling_Cython_dRk; __pyx_type_3GPy_6models_18state_space_cython_R_handling_Cython.tp_base = __pyx_ptype_3GPy_6models_18state_space_cython_Measurement_Callables_Cython; - if (PyType_Ready(&__pyx_type_3GPy_6models_18state_space_cython_R_handling_Cython) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 66; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyType_Ready(&__pyx_type_3GPy_6models_18state_space_cython_R_handling_Cython) < 0) __PYX_ERR(0, 66, __pyx_L1_error) __pyx_type_3GPy_6models_18state_space_cython_R_handling_Cython.tp_print = 0; + if ((CYTHON_USE_TYPE_SLOTS && CYTHON_USE_PYTYPE_LOOKUP) && likely(!__pyx_type_3GPy_6models_18state_space_cython_R_handling_Cython.tp_dictoffset && __pyx_type_3GPy_6models_18state_space_cython_R_handling_Cython.tp_getattro == PyObject_GenericGetAttr)) { + __pyx_type_3GPy_6models_18state_space_cython_R_handling_Cython.tp_getattro = __Pyx_PyObject_GenericGetAttr; + } #if CYTHON_COMPILING_IN_CPYTHON { - PyObject *wrapper = PyObject_GetAttrString((PyObject *)&__pyx_type_3GPy_6models_18state_space_cython_R_handling_Cython, "__init__"); if (unlikely(!wrapper)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 66; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + PyObject *wrapper = PyObject_GetAttrString((PyObject *)&__pyx_type_3GPy_6models_18state_space_cython_R_handling_Cython, "__init__"); if (unlikely(!wrapper)) __PYX_ERR(0, 66, __pyx_L1_error) if (Py_TYPE(wrapper) == &PyWrapperDescr_Type) { __pyx_wrapperbase_3GPy_6models_18state_space_cython_17R_handling_Cython___init__ = *((PyWrapperDescrObject *)wrapper)->d_base; __pyx_wrapperbase_3GPy_6models_18state_space_cython_17R_handling_Cython___init__.doc = __pyx_doc_3GPy_6models_18state_space_cython_17R_handling_Cython___init__; @@ -24924,8 +32984,9 @@ PyMODINIT_FUNC PyInit_state_space_cython(void) } } #endif - if (__Pyx_SetVtable(__pyx_type_3GPy_6models_18state_space_cython_R_handling_Cython.tp_dict, __pyx_vtabptr_3GPy_6models_18state_space_cython_R_handling_Cython) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 66; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - if (PyObject_SetAttrString(__pyx_m, "R_handling_Cython", (PyObject *)&__pyx_type_3GPy_6models_18state_space_cython_R_handling_Cython) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 66; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (__Pyx_SetVtable(__pyx_type_3GPy_6models_18state_space_cython_R_handling_Cython.tp_dict, __pyx_vtabptr_3GPy_6models_18state_space_cython_R_handling_Cython) < 0) __PYX_ERR(0, 66, __pyx_L1_error) + if (PyObject_SetAttr(__pyx_m, __pyx_n_s_R_handling_Cython, (PyObject *)&__pyx_type_3GPy_6models_18state_space_cython_R_handling_Cython) < 0) __PYX_ERR(0, 66, __pyx_L1_error) + if (__Pyx_setup_reduce((PyObject*)&__pyx_type_3GPy_6models_18state_space_cython_R_handling_Cython) < 0) __PYX_ERR(0, 66, __pyx_L1_error) __pyx_ptype_3GPy_6models_18state_space_cython_R_handling_Cython = &__pyx_type_3GPy_6models_18state_space_cython_R_handling_Cython; __pyx_vtabptr_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython = &__pyx_vtable_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython; __pyx_vtable_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython.__pyx_base = *__pyx_vtabptr_3GPy_6models_18state_space_cython_R_handling_Cython; @@ -24933,10 +32994,14 @@ PyMODINIT_FUNC PyInit_state_space_cython(void) __pyx_vtable_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython.__pyx_base.__pyx_base.Hk = (PyObject *(*)(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *, int, PyArrayObject *, PyArrayObject *, int __pyx_skip_dispatch))__pyx_f_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_Hk; __pyx_vtable_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython.__pyx_base.__pyx_base.dHk = (PyObject *(*)(struct __pyx_obj_3GPy_6models_18state_space_cython_Measurement_Callables_Cython *, int, int __pyx_skip_dispatch))__pyx_f_3GPy_6models_18state_space_cython_32Std_Measurement_Callables_Cython_dHk; __pyx_type_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython.tp_base = __pyx_ptype_3GPy_6models_18state_space_cython_R_handling_Cython; - if (PyType_Ready(&__pyx_type_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 165; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyType_Ready(&__pyx_type_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython) < 0) __PYX_ERR(0, 165, __pyx_L1_error) __pyx_type_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython.tp_print = 0; - if (__Pyx_SetVtable(__pyx_type_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython.tp_dict, __pyx_vtabptr_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 165; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - if (PyObject_SetAttrString(__pyx_m, "Std_Measurement_Callables_Cython", (PyObject *)&__pyx_type_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 165; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if ((CYTHON_USE_TYPE_SLOTS && CYTHON_USE_PYTYPE_LOOKUP) && likely(!__pyx_type_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython.tp_dictoffset && __pyx_type_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython.tp_getattro == PyObject_GenericGetAttr)) { + __pyx_type_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython.tp_getattro = __Pyx_PyObject_GenericGetAttr; + } + if (__Pyx_SetVtable(__pyx_type_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython.tp_dict, __pyx_vtabptr_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython) < 0) __PYX_ERR(0, 165, __pyx_L1_error) + if (PyObject_SetAttr(__pyx_m, __pyx_n_s_Std_Measurement_Callables_Cython, (PyObject *)&__pyx_type_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython) < 0) __PYX_ERR(0, 165, __pyx_L1_error) + if (__Pyx_setup_reduce((PyObject*)&__pyx_type_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython) < 0) __PYX_ERR(0, 165, __pyx_L1_error) __pyx_ptype_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython = &__pyx_type_3GPy_6models_18state_space_cython_Std_Measurement_Callables_Cython; __pyx_vtabptr_3GPy_6models_18state_space_cython_Q_handling_Cython = &__pyx_vtable_3GPy_6models_18state_space_cython_Q_handling_Cython; __pyx_vtable_3GPy_6models_18state_space_cython_Q_handling_Cython.__pyx_base = *__pyx_vtabptr_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython; @@ -24944,11 +33009,14 @@ PyMODINIT_FUNC PyInit_state_space_cython(void) __pyx_vtable_3GPy_6models_18state_space_cython_Q_handling_Cython.__pyx_base.Q_srk = (PyObject *(*)(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *, int, int __pyx_skip_dispatch))__pyx_f_3GPy_6models_18state_space_cython_17Q_handling_Cython_Q_srk; __pyx_vtable_3GPy_6models_18state_space_cython_Q_handling_Cython.__pyx_base.dQk = (PyObject *(*)(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *, int, int __pyx_skip_dispatch))__pyx_f_3GPy_6models_18state_space_cython_17Q_handling_Cython_dQk; __pyx_type_3GPy_6models_18state_space_cython_Q_handling_Cython.tp_base = __pyx_ptype_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython; - if (PyType_Ready(&__pyx_type_3GPy_6models_18state_space_cython_Q_handling_Cython) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 212; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyType_Ready(&__pyx_type_3GPy_6models_18state_space_cython_Q_handling_Cython) < 0) __PYX_ERR(0, 212, __pyx_L1_error) __pyx_type_3GPy_6models_18state_space_cython_Q_handling_Cython.tp_print = 0; + if ((CYTHON_USE_TYPE_SLOTS && CYTHON_USE_PYTYPE_LOOKUP) && likely(!__pyx_type_3GPy_6models_18state_space_cython_Q_handling_Cython.tp_dictoffset && __pyx_type_3GPy_6models_18state_space_cython_Q_handling_Cython.tp_getattro == PyObject_GenericGetAttr)) { + __pyx_type_3GPy_6models_18state_space_cython_Q_handling_Cython.tp_getattro = __Pyx_PyObject_GenericGetAttr; + } #if CYTHON_COMPILING_IN_CPYTHON { - PyObject *wrapper = PyObject_GetAttrString((PyObject *)&__pyx_type_3GPy_6models_18state_space_cython_Q_handling_Cython, "__init__"); if (unlikely(!wrapper)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 212; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + PyObject *wrapper = PyObject_GetAttrString((PyObject *)&__pyx_type_3GPy_6models_18state_space_cython_Q_handling_Cython, "__init__"); if (unlikely(!wrapper)) __PYX_ERR(0, 212, __pyx_L1_error) if (Py_TYPE(wrapper) == &PyWrapperDescr_Type) { __pyx_wrapperbase_3GPy_6models_18state_space_cython_17Q_handling_Cython___init__ = *((PyWrapperDescrObject *)wrapper)->d_base; __pyx_wrapperbase_3GPy_6models_18state_space_cython_17Q_handling_Cython___init__.doc = __pyx_doc_3GPy_6models_18state_space_cython_17Q_handling_Cython___init__; @@ -24956,8 +33024,9 @@ PyMODINIT_FUNC PyInit_state_space_cython(void) } } #endif - if (__Pyx_SetVtable(__pyx_type_3GPy_6models_18state_space_cython_Q_handling_Cython.tp_dict, __pyx_vtabptr_3GPy_6models_18state_space_cython_Q_handling_Cython) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 212; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - if (PyObject_SetAttrString(__pyx_m, "Q_handling_Cython", (PyObject *)&__pyx_type_3GPy_6models_18state_space_cython_Q_handling_Cython) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 212; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (__Pyx_SetVtable(__pyx_type_3GPy_6models_18state_space_cython_Q_handling_Cython.tp_dict, __pyx_vtabptr_3GPy_6models_18state_space_cython_Q_handling_Cython) < 0) __PYX_ERR(0, 212, __pyx_L1_error) + if (PyObject_SetAttr(__pyx_m, __pyx_n_s_Q_handling_Cython, (PyObject *)&__pyx_type_3GPy_6models_18state_space_cython_Q_handling_Cython) < 0) __PYX_ERR(0, 212, __pyx_L1_error) + if (__Pyx_setup_reduce((PyObject*)&__pyx_type_3GPy_6models_18state_space_cython_Q_handling_Cython) < 0) __PYX_ERR(0, 212, __pyx_L1_error) __pyx_ptype_3GPy_6models_18state_space_cython_Q_handling_Cython = &__pyx_type_3GPy_6models_18state_space_cython_Q_handling_Cython; __pyx_vtabptr_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython = &__pyx_vtable_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython; __pyx_vtable_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython.__pyx_base = *__pyx_vtabptr_3GPy_6models_18state_space_cython_Q_handling_Cython; @@ -24966,10 +33035,14 @@ PyMODINIT_FUNC PyInit_state_space_cython(void) __pyx_vtable_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython.__pyx_base.__pyx_base.dAk = (PyObject *(*)(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *, int, int __pyx_skip_dispatch))__pyx_f_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_dAk; __pyx_vtable_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython.__pyx_base.__pyx_base.reset = (PyObject *(*)(struct __pyx_obj_3GPy_6models_18state_space_cython_Dynamic_Callables_Cython *, int __pyx_skip_dispatch, struct __pyx_opt_args_3GPy_6models_18state_space_cython_24Dynamic_Callables_Cython_reset *__pyx_optional_args))__pyx_f_3GPy_6models_18state_space_cython_28Std_Dynamic_Callables_Cython_reset; __pyx_type_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython.tp_base = __pyx_ptype_3GPy_6models_18state_space_cython_Q_handling_Cython; - if (PyType_Ready(&__pyx_type_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 318; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyType_Ready(&__pyx_type_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython) < 0) __PYX_ERR(0, 318, __pyx_L1_error) __pyx_type_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython.tp_print = 0; - if (__Pyx_SetVtable(__pyx_type_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython.tp_dict, __pyx_vtabptr_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 318; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - if (PyObject_SetAttrString(__pyx_m, "Std_Dynamic_Callables_Cython", (PyObject *)&__pyx_type_3GPy_6models_18state_space_cython_Std_Dynamic_Callables_Cython) < 0) {__pyx_filename = __pyx_f[0]; 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__pyx_t_1 = 0; + + /* "(tree fragment)":1 + * def __pyx_unpickle_AQcompute_batch_Cython(__pyx_type, long __pyx_checksum, __pyx_state): # <<<<<<<<<<<<<< + * cdef object __pyx_PickleError + * cdef object __pyx_result + */ + __pyx_t_1 = PyCFunction_NewEx(&__pyx_mdef_3GPy_6models_18state_space_cython_19__pyx_unpickle_AQcompute_batch_Cython, NULL, __pyx_n_s_GPy_models_state_space_cython); if (unlikely(!__pyx_t_1)) __PYX_ERR(1, 1, __pyx_L1_error) + __Pyx_GOTREF(__pyx_t_1); + if (PyDict_SetItem(__pyx_d, __pyx_n_s_pyx_unpickle_AQcompute_batch_C, __pyx_t_1) < 0) __PYX_ERR(1, 1, __pyx_L1_error) __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; /* "GPy/models/state_space_cython.pyx":1 @@ -25108,17 +33504,17 @@ PyMODINIT_FUNC PyInit_state_space_cython(void) * """ * Contains some cython code for state space modelling. */ - __pyx_t_1 = PyDict_New(); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_PyDict_NewPresized(0); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 1, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_1); - if (PyDict_SetItem(__pyx_d, __pyx_n_s_test, __pyx_t_1) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyDict_SetItem(__pyx_d, __pyx_n_s_test, __pyx_t_1) < 0) __PYX_ERR(0, 1, __pyx_L1_error) __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "../../../../../../../Work/anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":979 - * arr.base = baseptr + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":1046 + * raise ImportError("numpy.core.umath failed to import") * - * cdef inline object get_array_base(ndarray arr): # <<<<<<<<<<<<<< - * if arr.base is NULL: - * return None + * cdef inline int import_ufunc() except -1: # <<<<<<<<<<<<<< + * try: + * _import_umath() */ /*--- Wrapped vars code ---*/ @@ -25131,27 +33527,30 @@ PyMODINIT_FUNC PyInit_state_space_cython(void) if (__pyx_d) { __Pyx_AddTraceback("init GPy.models.state_space_cython", __pyx_clineno, __pyx_lineno, __pyx_filename); } - Py_DECREF(__pyx_m); __pyx_m = 0; + Py_CLEAR(__pyx_m); } else if (!PyErr_Occurred()) { PyErr_SetString(PyExc_ImportError, "init GPy.models.state_space_cython"); } __pyx_L0:; __Pyx_RefNannyFinishContext(); - #if PY_MAJOR_VERSION < 3 - return; - #else + #if CYTHON_PEP489_MULTI_PHASE_INIT + return (__pyx_m != NULL) ? 0 : -1; + #elif PY_MAJOR_VERSION >= 3 return __pyx_m; + #else + return; #endif } /* --- Runtime support code --- */ +/* Refnanny */ #if CYTHON_REFNANNY static __Pyx_RefNannyAPIStruct *__Pyx_RefNannyImportAPI(const char *modname) { PyObject *m = NULL, *p = NULL; void *r = NULL; - m = PyImport_ImportModule((char *)modname); + m = PyImport_ImportModule(modname); if (!m) goto end; - p = PyObject_GetAttrString(m, (char *)"RefNannyAPI"); + p = PyObject_GetAttrString(m, "RefNannyAPI"); if (!p) goto end; r = PyLong_AsVoidPtr(p); end: @@ -25161,6 +33560,21 @@ end: } #endif +/* PyObjectGetAttrStr */ +#if CYTHON_USE_TYPE_SLOTS +static CYTHON_INLINE PyObject* __Pyx_PyObject_GetAttrStr(PyObject* obj, PyObject* attr_name) { + PyTypeObject* tp = Py_TYPE(obj); + if (likely(tp->tp_getattro)) + return tp->tp_getattro(obj, attr_name); +#if PY_MAJOR_VERSION < 3 + if (likely(tp->tp_getattr)) + return tp->tp_getattr(obj, PyString_AS_STRING(attr_name)); +#endif + return PyObject_GetAttr(obj, attr_name); +} +#endif + +/* GetBuiltinName */ static PyObject *__Pyx_GetBuiltinName(PyObject *name) { PyObject* result = __Pyx_PyObject_GetAttrStr(__pyx_b, name); if (unlikely(!result)) { @@ -25174,10 +33588,18 @@ static PyObject *__Pyx_GetBuiltinName(PyObject *name) { return result; } -static CYTHON_INLINE int __Pyx_IsLittleEndian(void) { - unsigned int n = 1; - return *(unsigned char*)(&n) != 0; +/* IsLittleEndian */ +static CYTHON_INLINE int __Pyx_Is_Little_Endian(void) +{ + union { + uint32_t u32; + uint8_t u8[4]; + } S; + S.u32 = 0x01020304; + return S.u8[0] == 4; } + +/* BufferFormatCheck */ static void __Pyx_BufFmt_Init(__Pyx_BufFmt_Context* ctx, __Pyx_BufFmt_StackElem* stack, __Pyx_TypeInfo* type) { @@ -25499,7 +33921,7 @@ static int __Pyx_BufFmt_ProcessTypeChunk(__Pyx_BufFmt_Context* ctx) { ctx->is_complex = 0; return 0; } -static CYTHON_INLINE PyObject * +static PyObject * __pyx_buffmt_parse_array(__Pyx_BufFmt_Context* ctx, const char** tsp) { const char *ts = *tsp; @@ -25564,7 +33986,7 @@ static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const cha ++ts; break; case '<': - if (!__Pyx_IsLittleEndian()) { + if (!__Pyx_Is_Little_Endian()) { PyErr_SetString(PyExc_ValueError, "Little-endian buffer not supported on big-endian compiler"); return NULL; } @@ -25573,7 +33995,7 @@ static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const cha break; case '>': case '!': - if (__Pyx_IsLittleEndian()) { + if (__Pyx_Is_Little_Endian()) { PyErr_SetString(PyExc_ValueError, "Big-endian buffer not supported on little-endian compiler"); return NULL; } @@ -25637,6 +34059,7 @@ static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const cha __Pyx_BufFmt_RaiseUnexpectedChar('Z'); return NULL; } + CYTHON_FALLTHROUGH; case 'c': case 'b': case 'B': case 'h': case 'H': case 'i': case 'I': case 'l': case 'L': case 'q': case 'Q': case 'f': case 'd': case 'g': @@ -25649,6 +34072,7 @@ static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const cha ++ts; break; } + CYTHON_FALLTHROUGH; case 's': if (__Pyx_BufFmt_ProcessTypeChunk(ctx) == -1) return NULL; ctx->enc_count = ctx->new_count; @@ -25676,24 +34100,30 @@ static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const cha } } } -static CYTHON_INLINE void __Pyx_ZeroBuffer(Py_buffer* buf) { + +/* BufferGetAndValidate */ + static CYTHON_INLINE void __Pyx_SafeReleaseBuffer(Py_buffer* info) { + if (unlikely(info->buf == NULL)) return; + if (info->suboffsets == __Pyx_minusones) info->suboffsets = NULL; + __Pyx_ReleaseBuffer(info); +} +static void __Pyx_ZeroBuffer(Py_buffer* buf) { buf->buf = NULL; buf->obj = NULL; buf->strides = __Pyx_zeros; buf->shape = __Pyx_zeros; buf->suboffsets = __Pyx_minusones; } -static CYTHON_INLINE int __Pyx_GetBufferAndValidate( +static int __Pyx__GetBufferAndValidate( Py_buffer* buf, PyObject* obj, __Pyx_TypeInfo* dtype, int flags, int nd, int cast, __Pyx_BufFmt_StackElem* stack) { - if (obj == Py_None || obj == NULL) { - __Pyx_ZeroBuffer(buf); - return 0; - } buf->buf = NULL; - if (__Pyx_GetBuffer(obj, buf, flags) == -1) goto fail; - if (buf->ndim != nd) { + if (unlikely(__Pyx_GetBuffer(obj, buf, flags) == -1)) { + __Pyx_ZeroBuffer(buf); + return -1; + } + if (unlikely(buf->ndim != nd)) { PyErr_Format(PyExc_ValueError, "Buffer has wrong number of dimensions (expected %d, got %d)", nd, buf->ndim); @@ -25704,7 +34134,7 @@ static CYTHON_INLINE int __Pyx_GetBufferAndValidate( __Pyx_BufFmt_Init(&ctx, stack, dtype); if (!__Pyx_BufFmt_CheckString(&ctx, buf->format)) goto fail; } - if ((unsigned)buf->itemsize != dtype->size) { + if (unlikely((unsigned)buf->itemsize != dtype->size)) { PyErr_Format(PyExc_ValueError, "Item size of buffer (%" CYTHON_FORMAT_SSIZE_T "d byte%s) does not match size of '%s' (%" CYTHON_FORMAT_SSIZE_T "d byte%s)", buf->itemsize, (buf->itemsize > 1) ? "s" : "", @@ -25714,16 +34144,154 @@ static CYTHON_INLINE int __Pyx_GetBufferAndValidate( if (buf->suboffsets == NULL) buf->suboffsets = __Pyx_minusones; return 0; fail:; - __Pyx_ZeroBuffer(buf); + __Pyx_SafeReleaseBuffer(buf); return -1; } -static CYTHON_INLINE void __Pyx_SafeReleaseBuffer(Py_buffer* info) { - if (info->buf == NULL) return; - if (info->suboffsets == __Pyx_minusones) info->suboffsets = NULL; - __Pyx_ReleaseBuffer(info); -} -#if CYTHON_COMPILING_IN_CPYTHON +/* PyFunctionFastCall */ + #if CYTHON_FAST_PYCALL +static PyObject* __Pyx_PyFunction_FastCallNoKw(PyCodeObject *co, PyObject **args, Py_ssize_t na, + PyObject *globals) { + PyFrameObject *f; + PyThreadState *tstate = __Pyx_PyThreadState_Current; + PyObject **fastlocals; + Py_ssize_t i; + PyObject *result; + assert(globals != NULL); + /* XXX Perhaps we should create a specialized + PyFrame_New() that doesn't take locals, but does + take builtins without sanity checking them. + */ + assert(tstate != NULL); + f = PyFrame_New(tstate, co, globals, NULL); + if (f == NULL) { + return NULL; + } + fastlocals = __Pyx_PyFrame_GetLocalsplus(f); + for (i = 0; i < na; i++) { + Py_INCREF(*args); + fastlocals[i] = *args++; + } + result = PyEval_EvalFrameEx(f,0); + ++tstate->recursion_depth; + Py_DECREF(f); + --tstate->recursion_depth; + return result; +} +#if 1 || PY_VERSION_HEX < 0x030600B1 +static PyObject *__Pyx_PyFunction_FastCallDict(PyObject *func, PyObject **args, int nargs, PyObject *kwargs) { + PyCodeObject *co = (PyCodeObject *)PyFunction_GET_CODE(func); + PyObject *globals = PyFunction_GET_GLOBALS(func); + PyObject *argdefs = PyFunction_GET_DEFAULTS(func); + PyObject *closure; +#if PY_MAJOR_VERSION >= 3 + PyObject *kwdefs; +#endif + PyObject *kwtuple, **k; + PyObject **d; + Py_ssize_t nd; + Py_ssize_t nk; + PyObject *result; + assert(kwargs == NULL || PyDict_Check(kwargs)); + nk = kwargs ? PyDict_Size(kwargs) : 0; + if (Py_EnterRecursiveCall((char*)" while calling a Python object")) { + return NULL; + } + if ( +#if PY_MAJOR_VERSION >= 3 + co->co_kwonlyargcount == 0 && +#endif + likely(kwargs == NULL || nk == 0) && + co->co_flags == (CO_OPTIMIZED | CO_NEWLOCALS | CO_NOFREE)) { + if (argdefs == NULL && co->co_argcount == nargs) { + result = __Pyx_PyFunction_FastCallNoKw(co, args, nargs, globals); + goto done; + } + else if (nargs == 0 && argdefs != NULL + && co->co_argcount == Py_SIZE(argdefs)) { + /* function called with no arguments, but all parameters have + a default value: use default values as arguments .*/ + args = &PyTuple_GET_ITEM(argdefs, 0); + result =__Pyx_PyFunction_FastCallNoKw(co, args, Py_SIZE(argdefs), globals); + goto done; + } + } + if (kwargs != NULL) { + Py_ssize_t pos, i; + kwtuple = PyTuple_New(2 * nk); + if (kwtuple == NULL) { + result = NULL; + goto done; + } + k = &PyTuple_GET_ITEM(kwtuple, 0); + pos = i = 0; + while (PyDict_Next(kwargs, &pos, &k[i], &k[i+1])) { + Py_INCREF(k[i]); + Py_INCREF(k[i+1]); + i += 2; + } + nk = i / 2; + } + else { + kwtuple = NULL; + k = NULL; + } + closure = PyFunction_GET_CLOSURE(func); +#if PY_MAJOR_VERSION >= 3 + kwdefs = PyFunction_GET_KW_DEFAULTS(func); +#endif + if (argdefs != NULL) { + d = &PyTuple_GET_ITEM(argdefs, 0); + nd = Py_SIZE(argdefs); + } + else { + d = NULL; + nd = 0; + } +#if PY_MAJOR_VERSION >= 3 + result = PyEval_EvalCodeEx((PyObject*)co, globals, (PyObject *)NULL, + args, nargs, + k, (int)nk, + d, (int)nd, kwdefs, closure); +#else + result = PyEval_EvalCodeEx(co, globals, (PyObject *)NULL, + args, nargs, + k, (int)nk, + d, (int)nd, closure); +#endif + Py_XDECREF(kwtuple); +done: + Py_LeaveRecursiveCall(); + return result; +} +#endif +#endif + +/* PyCFunctionFastCall */ + #if CYTHON_FAST_PYCCALL +static CYTHON_INLINE PyObject * __Pyx_PyCFunction_FastCall(PyObject *func_obj, PyObject **args, Py_ssize_t nargs) { + PyCFunctionObject *func = (PyCFunctionObject*)func_obj; + PyCFunction meth = PyCFunction_GET_FUNCTION(func); + PyObject *self = PyCFunction_GET_SELF(func); + int flags = PyCFunction_GET_FLAGS(func); + assert(PyCFunction_Check(func)); + assert(METH_FASTCALL == (flags & ~(METH_CLASS | METH_STATIC | METH_COEXIST | METH_KEYWORDS | METH_STACKLESS))); + assert(nargs >= 0); + assert(nargs == 0 || args != NULL); + /* _PyCFunction_FastCallDict() must not be called with an exception set, + because it may clear it (directly or indirectly) and so the + caller loses its exception */ + assert(!PyErr_Occurred()); + if ((PY_VERSION_HEX < 0x030700A0) || unlikely(flags & METH_KEYWORDS)) { + return (*((__Pyx_PyCFunctionFastWithKeywords)(void*)meth)) (self, args, nargs, NULL); + } else { + return (*((__Pyx_PyCFunctionFast)(void*)meth)) (self, args, nargs); + } +} +#endif + +/* PyObjectCall */ + #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyObject_Call(PyObject *func, PyObject *arg, PyObject *kw) { PyObject *result; ternaryfunc call = func->ob_type->tp_call; @@ -25742,10 +34310,10 @@ static CYTHON_INLINE PyObject* __Pyx_PyObject_Call(PyObject *func, PyObject *arg } #endif -static CYTHON_INLINE void __Pyx_ErrRestore(PyObject *type, PyObject *value, PyObject *tb) { -#if CYTHON_COMPILING_IN_CPYTHON +/* PyErrFetchRestore */ + #if CYTHON_FAST_THREAD_STATE +static CYTHON_INLINE void __Pyx_ErrRestoreInState(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb) { PyObject *tmp_type, *tmp_value, *tmp_tb; - PyThreadState *tstate = PyThreadState_GET(); tmp_type = tstate->curexc_type; tmp_value = tstate->curexc_value; tmp_tb = tstate->curexc_traceback; @@ -25755,27 +34323,22 @@ static CYTHON_INLINE void __Pyx_ErrRestore(PyObject *type, PyObject *value, PyOb Py_XDECREF(tmp_type); Py_XDECREF(tmp_value); Py_XDECREF(tmp_tb); -#else - PyErr_Restore(type, value, tb); -#endif } -static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb) { -#if CYTHON_COMPILING_IN_CPYTHON - PyThreadState *tstate = PyThreadState_GET(); +static CYTHON_INLINE void __Pyx_ErrFetchInState(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb) { *type = tstate->curexc_type; *value = tstate->curexc_value; *tb = tstate->curexc_traceback; tstate->curexc_type = 0; tstate->curexc_value = 0; tstate->curexc_traceback = 0; -#else - PyErr_Fetch(type, value, tb); -#endif } +#endif -#if PY_MAJOR_VERSION < 3 +/* RaiseException */ + #if PY_MAJOR_VERSION < 3 static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, CYTHON_UNUSED PyObject *cause) { + __Pyx_PyThreadState_declare Py_XINCREF(type); if (!value || value == Py_None) value = NULL; @@ -25814,6 +34377,7 @@ static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, goto raise_error; } } + __Pyx_PyThreadState_assign __Pyx_ErrRestore(type, value, tb); return; raise_error: @@ -25847,10 +34411,13 @@ static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject if (value && PyExceptionInstance_Check(value)) { instance_class = (PyObject*) Py_TYPE(value); if (instance_class != type) { - if (PyObject_IsSubclass(instance_class, type)) { - type = instance_class; - } else { + int is_subclass = PyObject_IsSubclass(instance_class, type); + if (!is_subclass) { instance_class = NULL; + } else if (unlikely(is_subclass == -1)) { + goto bad; + } else { + type = instance_class; } } } @@ -25883,11 +34450,7 @@ static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject "raise: exception class must be a subclass of BaseException"); goto bad; } -#if PY_VERSION_HEX >= 0x03030000 if (cause) { -#else - if (cause && cause != Py_None) { -#endif PyObject *fixed_cause; if (cause == Py_None) { fixed_cause = NULL; @@ -25910,12 +34473,12 @@ static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject if (tb) { #if CYTHON_COMPILING_IN_PYPY PyObject *tmp_type, *tmp_value, *tmp_tb; - PyErr_Fetch(tmp_type, tmp_value, tmp_tb); + PyErr_Fetch(&tmp_type, &tmp_value, &tmp_tb); Py_INCREF(tb); PyErr_Restore(tmp_type, tmp_value, tb); Py_XDECREF(tmp_tb); #else - PyThreadState *tstate = PyThreadState_GET(); + PyThreadState *tstate = __Pyx_PyThreadState_Current; PyObject* tmp_tb = tstate->curexc_traceback; if (tb != tmp_tb) { Py_INCREF(tb); @@ -25930,7 +34493,8 @@ bad: } #endif -static void __Pyx_RaiseArgtupleInvalid( +/* RaiseArgTupleInvalid */ + static void __Pyx_RaiseArgtupleInvalid( const char* func_name, int exact, Py_ssize_t num_min, @@ -25955,7 +34519,8 @@ static void __Pyx_RaiseArgtupleInvalid( (num_expected == 1) ? "" : "s", num_found); } -static void __Pyx_RaiseDoubleKeywordsError( +/* RaiseDoubleKeywords */ + static void __Pyx_RaiseDoubleKeywordsError( const char* func_name, PyObject* kw_name) { @@ -25968,7 +34533,8 @@ static void __Pyx_RaiseDoubleKeywordsError( #endif } -static int __Pyx_ParseOptionalKeywords( +/* ParseKeywords */ + static int __Pyx_ParseOptionalKeywords( PyObject *kwds, PyObject **argnames[], PyObject *kwds2, @@ -26069,33 +34635,58 @@ bad: return -1; } -static void __Pyx_RaiseArgumentTypeInvalid(const char* name, PyObject *obj, PyTypeObject *type) { - PyErr_Format(PyExc_TypeError, - "Argument '%.200s' has incorrect type (expected %.200s, got %.200s)", - name, type->tp_name, Py_TYPE(obj)->tp_name); -} -static CYTHON_INLINE int __Pyx_ArgTypeTest(PyObject *obj, PyTypeObject *type, int none_allowed, - const char *name, int exact) +/* ArgTypeTest */ + static int __Pyx__ArgTypeTest(PyObject *obj, PyTypeObject *type, const char *name, int exact) { if (unlikely(!type)) { PyErr_SetString(PyExc_SystemError, "Missing type object"); return 0; } - if (none_allowed && obj == Py_None) return 1; else if (exact) { - if (likely(Py_TYPE(obj) == type)) return 1; #if PY_MAJOR_VERSION == 2 - else if ((type == &PyBaseString_Type) && likely(__Pyx_PyBaseString_CheckExact(obj))) return 1; + if ((type == &PyBaseString_Type) && likely(__Pyx_PyBaseString_CheckExact(obj))) return 1; #endif } else { - if (likely(PyObject_TypeCheck(obj, type))) return 1; + if (likely(__Pyx_TypeCheck(obj, type))) return 1; } - __Pyx_RaiseArgumentTypeInvalid(name, obj, type); + PyErr_Format(PyExc_TypeError, + "Argument '%.200s' has incorrect type (expected %.200s, got %.200s)", + name, type->tp_name, Py_TYPE(obj)->tp_name); return 0; } -#if CYTHON_COMPILING_IN_CPYTHON +/* PyObjectCall2Args */ + static CYTHON_UNUSED PyObject* __Pyx_PyObject_Call2Args(PyObject* function, PyObject* arg1, PyObject* arg2) { + PyObject *args, *result = NULL; + #if CYTHON_FAST_PYCALL + if (PyFunction_Check(function)) { + PyObject *args[2] = {arg1, arg2}; + return __Pyx_PyFunction_FastCall(function, args, 2); + } + #endif + #if CYTHON_FAST_PYCCALL + if (__Pyx_PyFastCFunction_Check(function)) { + PyObject *args[2] = {arg1, arg2}; + return __Pyx_PyCFunction_FastCall(function, args, 2); + } + #endif + args = PyTuple_New(2); + if (unlikely(!args)) goto done; + Py_INCREF(arg1); + PyTuple_SET_ITEM(args, 0, arg1); + Py_INCREF(arg2); + PyTuple_SET_ITEM(args, 1, arg2); + Py_INCREF(function); + result = __Pyx_PyObject_Call(function, args, NULL); + Py_DECREF(args); + Py_DECREF(function); +done: + return result; +} + +/* PyObjectCallMethO */ + #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyObject_CallMethO(PyObject *func, PyObject *arg) { PyObject *self, *result; PyCFunction cfunc; @@ -26114,7 +34705,8 @@ static CYTHON_INLINE PyObject* __Pyx_PyObject_CallMethO(PyObject *func, PyObject } #endif -#if CYTHON_COMPILING_IN_CPYTHON +/* PyObjectCallOneArg */ + #if CYTHON_COMPILING_IN_CPYTHON static PyObject* __Pyx__PyObject_CallOneArg(PyObject *func, PyObject *arg) { PyObject *result; PyObject *args = PyTuple_New(1); @@ -26126,75 +34718,276 @@ static PyObject* __Pyx__PyObject_CallOneArg(PyObject *func, PyObject *arg) { return result; } static CYTHON_INLINE PyObject* __Pyx_PyObject_CallOneArg(PyObject *func, PyObject *arg) { -#ifdef __Pyx_CyFunction_USED - if (likely(PyCFunction_Check(func) || PyObject_TypeCheck(func, __pyx_CyFunctionType))) { -#else - if (likely(PyCFunction_Check(func))) { +#if CYTHON_FAST_PYCALL + if (PyFunction_Check(func)) { + return __Pyx_PyFunction_FastCall(func, &arg, 1); + } #endif + if (likely(PyCFunction_Check(func))) { if (likely(PyCFunction_GET_FLAGS(func) & METH_O)) { return __Pyx_PyObject_CallMethO(func, arg); +#if CYTHON_FAST_PYCCALL + } else if (PyCFunction_GET_FLAGS(func) & METH_FASTCALL) { + return __Pyx_PyCFunction_FastCall(func, &arg, 1); +#endif } } return __Pyx__PyObject_CallOneArg(func, arg); } #else static CYTHON_INLINE PyObject* __Pyx_PyObject_CallOneArg(PyObject *func, PyObject *arg) { - PyObject* args = PyTuple_Pack(1, arg); - return (likely(args)) ? __Pyx_PyObject_Call(func, args, NULL) : NULL; -} -#endif - -static CYTHON_INLINE PyObject *__Pyx_GetModuleGlobalName(PyObject *name) { PyObject *result; -#if CYTHON_COMPILING_IN_CPYTHON - result = PyDict_GetItem(__pyx_d, name); - if (likely(result)) { - Py_INCREF(result); - } else { -#else - result = PyObject_GetItem(__pyx_d, name); - if (!result) { - PyErr_Clear(); -#endif - result = __Pyx_GetBuiltinName(name); - } + PyObject *args = PyTuple_Pack(1, arg); + if (unlikely(!args)) return NULL; + result = __Pyx_PyObject_Call(func, args, NULL); + Py_DECREF(args); return result; } +#endif -static CYTHON_INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type) { +/* PyErrExceptionMatches */ + #if CYTHON_FAST_THREAD_STATE +static int __Pyx_PyErr_ExceptionMatchesTuple(PyObject *exc_type, PyObject *tuple) { + Py_ssize_t i, n; + n = PyTuple_GET_SIZE(tuple); +#if PY_MAJOR_VERSION >= 3 + for (i=0; icurexc_type; + if (exc_type == err) return 1; + if (unlikely(!exc_type)) return 0; + if (unlikely(PyTuple_Check(err))) + return __Pyx_PyErr_ExceptionMatchesTuple(exc_type, err); + return __Pyx_PyErr_GivenExceptionMatches(exc_type, err); +} +#endif + +/* GetAttr */ + static CYTHON_INLINE PyObject *__Pyx_GetAttr(PyObject *o, PyObject *n) { +#if CYTHON_USE_TYPE_SLOTS +#if PY_MAJOR_VERSION >= 3 + if (likely(PyUnicode_Check(n))) +#else + if (likely(PyString_Check(n))) +#endif + return __Pyx_PyObject_GetAttrStr(o, n); +#endif + return PyObject_GetAttr(o, n); +} + +/* GetAttr3 */ + static PyObject *__Pyx_GetAttr3Default(PyObject *d) { + __Pyx_PyThreadState_declare + __Pyx_PyThreadState_assign + if (unlikely(!__Pyx_PyErr_ExceptionMatches(PyExc_AttributeError))) + return NULL; + __Pyx_PyErr_Clear(); + Py_INCREF(d); + return d; +} +static CYTHON_INLINE PyObject *__Pyx_GetAttr3(PyObject *o, PyObject *n, PyObject *d) { + PyObject *r = __Pyx_GetAttr(o, n); + return (likely(r)) ? r : __Pyx_GetAttr3Default(d); +} + +/* GetModuleGlobalName */ + #if CYTHON_USE_DICT_VERSIONS +static PyObject *__Pyx__GetModuleGlobalName(PyObject *name, PY_UINT64_T *dict_version, PyObject **dict_cached_value) +#else +static CYTHON_INLINE PyObject *__Pyx__GetModuleGlobalName(PyObject *name) +#endif +{ + PyObject *result; +#if !CYTHON_AVOID_BORROWED_REFS +#if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX >= 0x030500A1 + result = _PyDict_GetItem_KnownHash(__pyx_d, name, ((PyASCIIObject *) name)->hash); + __PYX_UPDATE_DICT_CACHE(__pyx_d, result, *dict_cached_value, *dict_version) + if (likely(result)) { + return __Pyx_NewRef(result); + } else if (unlikely(PyErr_Occurred())) { + return NULL; + } +#else + result = PyDict_GetItem(__pyx_d, name); + __PYX_UPDATE_DICT_CACHE(__pyx_d, result, *dict_cached_value, *dict_version) + if (likely(result)) { + return __Pyx_NewRef(result); + } +#endif +#else + result = PyObject_GetItem(__pyx_d, name); + __PYX_UPDATE_DICT_CACHE(__pyx_d, result, *dict_cached_value, *dict_version) + if (likely(result)) { + return __Pyx_NewRef(result); + } + PyErr_Clear(); +#endif + return __Pyx_GetBuiltinName(name); +} + +/* GetItemInt */ + static PyObject *__Pyx_GetItemInt_Generic(PyObject *o, PyObject* j) { + PyObject *r; + if (!j) return NULL; + r = PyObject_GetItem(o, j); + Py_DECREF(j); + return r; +} +static CYTHON_INLINE PyObject *__Pyx_GetItemInt_List_Fast(PyObject *o, Py_ssize_t i, + CYTHON_NCP_UNUSED int wraparound, + CYTHON_NCP_UNUSED int boundscheck) { +#if CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS + Py_ssize_t wrapped_i = i; + if (wraparound & unlikely(i < 0)) { + wrapped_i += PyList_GET_SIZE(o); + } + if ((!boundscheck) || likely(__Pyx_is_valid_index(wrapped_i, PyList_GET_SIZE(o)))) { + PyObject *r = PyList_GET_ITEM(o, wrapped_i); + Py_INCREF(r); + return r; + } + return __Pyx_GetItemInt_Generic(o, PyInt_FromSsize_t(i)); +#else + return PySequence_GetItem(o, i); +#endif +} +static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Tuple_Fast(PyObject *o, Py_ssize_t i, + CYTHON_NCP_UNUSED int wraparound, + CYTHON_NCP_UNUSED int boundscheck) { +#if CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS + Py_ssize_t wrapped_i = i; + if (wraparound & unlikely(i < 0)) { + wrapped_i += PyTuple_GET_SIZE(o); + } + if ((!boundscheck) || likely(__Pyx_is_valid_index(wrapped_i, PyTuple_GET_SIZE(o)))) { + PyObject *r = PyTuple_GET_ITEM(o, wrapped_i); + Py_INCREF(r); + return r; + } + return __Pyx_GetItemInt_Generic(o, PyInt_FromSsize_t(i)); +#else + return PySequence_GetItem(o, i); +#endif +} +static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Fast(PyObject *o, Py_ssize_t i, int is_list, + CYTHON_NCP_UNUSED int wraparound, + CYTHON_NCP_UNUSED int boundscheck) { +#if CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS && CYTHON_USE_TYPE_SLOTS + if (is_list || PyList_CheckExact(o)) { + Py_ssize_t n = ((!wraparound) | likely(i >= 0)) ? i : i + PyList_GET_SIZE(o); + if ((!boundscheck) || (likely(__Pyx_is_valid_index(n, PyList_GET_SIZE(o))))) { + PyObject *r = PyList_GET_ITEM(o, n); + Py_INCREF(r); + return r; + } + } + else if (PyTuple_CheckExact(o)) { + Py_ssize_t n = ((!wraparound) | likely(i >= 0)) ? i : i + PyTuple_GET_SIZE(o); + if ((!boundscheck) || likely(__Pyx_is_valid_index(n, PyTuple_GET_SIZE(o)))) { + PyObject *r = PyTuple_GET_ITEM(o, n); + Py_INCREF(r); + return r; + } + } else { + PySequenceMethods *m = Py_TYPE(o)->tp_as_sequence; + if (likely(m && m->sq_item)) { + if (wraparound && unlikely(i < 0) && likely(m->sq_length)) { + Py_ssize_t l = m->sq_length(o); + if (likely(l >= 0)) { + i += l; + } else { + if (!PyErr_ExceptionMatches(PyExc_OverflowError)) + return NULL; + PyErr_Clear(); + } + } + return m->sq_item(o, i); + } + } +#else + if (is_list || PySequence_Check(o)) { + return PySequence_GetItem(o, i); + } +#endif + return __Pyx_GetItemInt_Generic(o, PyInt_FromSsize_t(i)); +} + +/* ObjectGetItem */ + #if CYTHON_USE_TYPE_SLOTS +static PyObject *__Pyx_PyObject_GetIndex(PyObject *obj, PyObject* index) { + PyObject *runerr; + Py_ssize_t key_value; + PySequenceMethods *m = Py_TYPE(obj)->tp_as_sequence; + if (unlikely(!(m && m->sq_item))) { + PyErr_Format(PyExc_TypeError, "'%.200s' object is not subscriptable", Py_TYPE(obj)->tp_name); + return NULL; + } + key_value = __Pyx_PyIndex_AsSsize_t(index); + if (likely(key_value != -1 || !(runerr = PyErr_Occurred()))) { + return __Pyx_GetItemInt_Fast(obj, key_value, 0, 1, 1); + } + if (PyErr_GivenExceptionMatches(runerr, PyExc_OverflowError)) { + PyErr_Clear(); + PyErr_Format(PyExc_IndexError, "cannot fit '%.200s' into an index-sized integer", Py_TYPE(index)->tp_name); + } + return NULL; +} +static PyObject *__Pyx_PyObject_GetItem(PyObject *obj, PyObject* key) { + PyMappingMethods *m = Py_TYPE(obj)->tp_as_mapping; + if (likely(m && m->mp_subscript)) { + return m->mp_subscript(obj, key); + } + return __Pyx_PyObject_GetIndex(obj, key); +} +#endif + +/* ExtTypeTest */ + static CYTHON_INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type) { if (unlikely(!type)) { PyErr_SetString(PyExc_SystemError, "Missing type object"); return 0; } - if (likely(PyObject_TypeCheck(obj, type))) + if (likely(__Pyx_TypeCheck(obj, type))) return 1; PyErr_Format(PyExc_TypeError, "Cannot convert %.200s to %.200s", Py_TYPE(obj)->tp_name, type->tp_name); return 0; } -static void __Pyx_RaiseBufferFallbackError(void) { +/* BufferFallbackError */ + static void __Pyx_RaiseBufferFallbackError(void) { PyErr_SetString(PyExc_ValueError, "Buffer acquisition failed on assignment; and then reacquiring the old buffer failed too!"); } -static CYTHON_INLINE void __Pyx_RaiseTooManyValuesError(Py_ssize_t expected) { +/* RaiseTooManyValuesToUnpack */ + static CYTHON_INLINE void __Pyx_RaiseTooManyValuesError(Py_ssize_t expected) { PyErr_Format(PyExc_ValueError, "too many values to unpack (expected %" CYTHON_FORMAT_SSIZE_T "d)", expected); } -static CYTHON_INLINE void __Pyx_RaiseNeedMoreValuesError(Py_ssize_t index) { +/* RaiseNeedMoreValuesToUnpack */ + static CYTHON_INLINE void __Pyx_RaiseNeedMoreValuesError(Py_ssize_t index) { PyErr_Format(PyExc_ValueError, "need more than %" CYTHON_FORMAT_SSIZE_T "d value%.1s to unpack", index, (index == 1) ? "" : "s"); } -static CYTHON_INLINE int __Pyx_IterFinish(void) { -#if CYTHON_COMPILING_IN_CPYTHON - PyThreadState *tstate = PyThreadState_GET(); +/* IterFinish */ + static CYTHON_INLINE int __Pyx_IterFinish(void) { +#if CYTHON_FAST_THREAD_STATE + PyThreadState *tstate = __Pyx_PyThreadState_Current; PyObject* exc_type = tstate->curexc_type; if (unlikely(exc_type)) { - if (likely(exc_type == PyExc_StopIteration) || PyErr_GivenExceptionMatches(exc_type, PyExc_StopIteration)) { + if (likely(__Pyx_PyErr_GivenExceptionMatches(exc_type, PyExc_StopIteration))) { PyObject *exc_value, *exc_tb; exc_value = tstate->curexc_value; exc_tb = tstate->curexc_traceback; @@ -26223,7 +35016,8 @@ static CYTHON_INLINE int __Pyx_IterFinish(void) { #endif } -static int __Pyx_IternextUnpackEndCheck(PyObject *retval, Py_ssize_t expected) { +/* UnpackItemEndCheck */ + static int __Pyx_IternextUnpackEndCheck(PyObject *retval, Py_ssize_t expected) { if (unlikely(retval)) { Py_DECREF(retval); __Pyx_RaiseTooManyValuesError(expected); @@ -26234,89 +35028,398 @@ static int __Pyx_IternextUnpackEndCheck(PyObject *retval, Py_ssize_t expected) { return 0; } -static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Generic(PyObject *o, PyObject* j) { - PyObject *r; - if (!j) return NULL; - r = PyObject_GetItem(o, j); +/* DictGetItem */ + #if PY_MAJOR_VERSION >= 3 && !CYTHON_COMPILING_IN_PYPY +static PyObject *__Pyx_PyDict_GetItem(PyObject *d, PyObject* key) { + PyObject *value; + value = PyDict_GetItemWithError(d, key); + if (unlikely(!value)) { + if (!PyErr_Occurred()) { + if (unlikely(PyTuple_Check(key))) { + PyObject* args = PyTuple_Pack(1, key); + if (likely(args)) { + PyErr_SetObject(PyExc_KeyError, args); + Py_DECREF(args); + } + } else { + PyErr_SetObject(PyExc_KeyError, key); + } + } + return NULL; + } + Py_INCREF(value); + return value; +} +#endif + +/* PyObjectSetAttrStr */ + #if CYTHON_USE_TYPE_SLOTS +static CYTHON_INLINE int __Pyx_PyObject_SetAttrStr(PyObject* obj, PyObject* attr_name, PyObject* value) { + PyTypeObject* tp = Py_TYPE(obj); + if (likely(tp->tp_setattro)) + return tp->tp_setattro(obj, attr_name, value); +#if PY_MAJOR_VERSION < 3 + if (likely(tp->tp_setattr)) + return tp->tp_setattr(obj, PyString_AS_STRING(attr_name), value); +#endif + return PyObject_SetAttr(obj, attr_name, value); +} +#endif + +/* SetItemInt */ + static int __Pyx_SetItemInt_Generic(PyObject *o, PyObject *j, PyObject *v) { + int r; + if (!j) return -1; + r = PyObject_SetItem(o, j, v); Py_DECREF(j); return r; } -static CYTHON_INLINE PyObject *__Pyx_GetItemInt_List_Fast(PyObject *o, Py_ssize_t i, - int wraparound, int boundscheck) { -#if CYTHON_COMPILING_IN_CPYTHON - if (wraparound & unlikely(i < 0)) i += PyList_GET_SIZE(o); - if ((!boundscheck) || likely((0 <= i) & (i < PyList_GET_SIZE(o)))) { - PyObject *r = PyList_GET_ITEM(o, i); - Py_INCREF(r); - return r; - } - return __Pyx_GetItemInt_Generic(o, PyInt_FromSsize_t(i)); -#else - return PySequence_GetItem(o, i); -#endif -} -static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Tuple_Fast(PyObject *o, Py_ssize_t i, - int wraparound, int boundscheck) { -#if CYTHON_COMPILING_IN_CPYTHON - if (wraparound & unlikely(i < 0)) i += PyTuple_GET_SIZE(o); - if ((!boundscheck) || likely((0 <= i) & (i < PyTuple_GET_SIZE(o)))) { - PyObject *r = PyTuple_GET_ITEM(o, i); - Py_INCREF(r); - return r; - } - return __Pyx_GetItemInt_Generic(o, PyInt_FromSsize_t(i)); -#else - return PySequence_GetItem(o, i); -#endif -} -static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Fast(PyObject *o, Py_ssize_t i, - int is_list, int wraparound, int boundscheck) { -#if CYTHON_COMPILING_IN_CPYTHON +static CYTHON_INLINE int __Pyx_SetItemInt_Fast(PyObject *o, Py_ssize_t i, PyObject *v, int is_list, + CYTHON_NCP_UNUSED int wraparound, CYTHON_NCP_UNUSED int boundscheck) { +#if CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS && CYTHON_USE_TYPE_SLOTS if (is_list || PyList_CheckExact(o)) { - Py_ssize_t n = ((!wraparound) | likely(i >= 0)) ? i : i + PyList_GET_SIZE(o); - if ((!boundscheck) || (likely((n >= 0) & (n < PyList_GET_SIZE(o))))) { - PyObject *r = PyList_GET_ITEM(o, n); - Py_INCREF(r); - return r; - } - } - else if (PyTuple_CheckExact(o)) { - Py_ssize_t n = ((!wraparound) | likely(i >= 0)) ? i : i + PyTuple_GET_SIZE(o); - if ((!boundscheck) || likely((n >= 0) & (n < PyTuple_GET_SIZE(o)))) { - PyObject *r = PyTuple_GET_ITEM(o, n); - Py_INCREF(r); - return r; + Py_ssize_t n = (!wraparound) ? i : ((likely(i >= 0)) ? i : i + PyList_GET_SIZE(o)); + if ((!boundscheck) || likely(__Pyx_is_valid_index(n, PyList_GET_SIZE(o)))) { + PyObject* old = PyList_GET_ITEM(o, n); + Py_INCREF(v); + PyList_SET_ITEM(o, n, v); + Py_DECREF(old); + return 1; } } else { PySequenceMethods *m = Py_TYPE(o)->tp_as_sequence; - if (likely(m && m->sq_item)) { + if (likely(m && m->sq_ass_item)) { if (wraparound && unlikely(i < 0) && likely(m->sq_length)) { Py_ssize_t l = m->sq_length(o); if (likely(l >= 0)) { i += l; } else { - if (PyErr_ExceptionMatches(PyExc_OverflowError)) - PyErr_Clear(); - else - return NULL; + if (!PyErr_ExceptionMatches(PyExc_OverflowError)) + return -1; + PyErr_Clear(); } } - return m->sq_item(o, i); + return m->sq_ass_item(o, i, v); } } #else - if (is_list || PySequence_Check(o)) { - return PySequence_GetItem(o, i); +#if CYTHON_COMPILING_IN_PYPY + if (is_list || (PySequence_Check(o) && !PyDict_Check(o))) +#else + if (is_list || PySequence_Check(o)) +#endif + { + return PySequence_SetItem(o, i, v); } #endif - return __Pyx_GetItemInt_Generic(o, PyInt_FromSsize_t(i)); + return __Pyx_SetItemInt_Generic(o, PyInt_FromSsize_t(i), v); } -static CYTHON_INLINE void __Pyx_RaiseNoneNotIterableError(void) { +/* PyFloatBinop */ + #if !CYTHON_COMPILING_IN_PYPY +static PyObject* __Pyx_PyFloat_DivideCObj(PyObject *op1, PyObject *op2, double floatval, CYTHON_UNUSED int inplace) { + const double a = floatval; + double b, result; + if (likely(PyFloat_CheckExact(op2))) { + b = PyFloat_AS_DOUBLE(op2); + } else + #if PY_MAJOR_VERSION < 3 + if (likely(PyInt_CheckExact(op2))) { + b = (double) PyInt_AS_LONG(op2); + } else + #endif + if (likely(PyLong_CheckExact(op2))) { + #if CYTHON_USE_PYLONG_INTERNALS + const digit* digits = ((PyLongObject*)op2)->ob_digit; + const Py_ssize_t size = Py_SIZE(op2); + switch (size) { + case 0: b = 0.0; break; + case -1: b = -(double) digits[0]; break; + case 1: b = (double) digits[0]; break; + case -2: + case 2: + if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT && ((8 * sizeof(unsigned long) < 53) || (1 * PyLong_SHIFT < 53))) { + b = (double) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); + if ((8 * sizeof(unsigned long) < 53) || (2 * PyLong_SHIFT < 53) || (b < (double) ((PY_LONG_LONG)1 << 53))) { + if (size == -2) + b = -b; + break; + } + } + CYTHON_FALLTHROUGH; + case -3: + case 3: + if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT && ((8 * sizeof(unsigned long) < 53) || (2 * PyLong_SHIFT < 53))) { + b = (double) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); + if ((8 * sizeof(unsigned long) < 53) || (3 * PyLong_SHIFT < 53) || (b < (double) ((PY_LONG_LONG)1 << 53))) { + if (size == -3) + b = -b; + break; + } + } + CYTHON_FALLTHROUGH; + case -4: + case 4: + if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT && ((8 * sizeof(unsigned long) < 53) || (3 * PyLong_SHIFT < 53))) { + b = (double) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); + if ((8 * sizeof(unsigned long) < 53) || (4 * PyLong_SHIFT < 53) || (b < (double) ((PY_LONG_LONG)1 << 53))) { + if (size == -4) + b = -b; + break; + } + } + CYTHON_FALLTHROUGH; + default: + #else + { + #endif + b = PyLong_AsDouble(op2); + if (unlikely(b == -1.0 && PyErr_Occurred())) return NULL; + } + } else { + return (inplace ? __Pyx_PyNumber_InPlaceDivide(op1, op2) : __Pyx_PyNumber_Divide(op1, op2)); + } + PyFPE_START_PROTECT("divide", return NULL) + result = a / b; + PyFPE_END_PROTECT(result) + return PyFloat_FromDouble(result); +} +#endif + +/* Import */ + static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level) { + PyObject *empty_list = 0; + PyObject *module = 0; + PyObject *global_dict = 0; + PyObject *empty_dict = 0; + PyObject *list; + #if PY_MAJOR_VERSION < 3 + PyObject *py_import; + py_import = __Pyx_PyObject_GetAttrStr(__pyx_b, __pyx_n_s_import); + if (!py_import) + goto bad; + #endif + if (from_list) + list = from_list; + else { + empty_list = PyList_New(0); + if (!empty_list) + goto bad; + list = empty_list; + } + global_dict = PyModule_GetDict(__pyx_m); + if (!global_dict) + goto bad; + empty_dict = PyDict_New(); + if (!empty_dict) + goto bad; + { + #if PY_MAJOR_VERSION >= 3 + if (level == -1) { + if (strchr(__Pyx_MODULE_NAME, '.')) { + module = PyImport_ImportModuleLevelObject( + name, global_dict, empty_dict, list, 1); + if (!module) { + if (!PyErr_ExceptionMatches(PyExc_ImportError)) + goto bad; + PyErr_Clear(); + } + } + level = 0; + } + #endif + if (!module) { + #if PY_MAJOR_VERSION < 3 + PyObject *py_level = PyInt_FromLong(level); + if (!py_level) + goto bad; + module = PyObject_CallFunctionObjArgs(py_import, + name, global_dict, empty_dict, list, py_level, (PyObject *)NULL); + Py_DECREF(py_level); + #else + module = PyImport_ImportModuleLevelObject( + name, global_dict, empty_dict, list, level); + #endif + } + } +bad: + #if PY_MAJOR_VERSION < 3 + Py_XDECREF(py_import); + #endif + Py_XDECREF(empty_list); + Py_XDECREF(empty_dict); + return module; +} + +/* ImportFrom */ + static PyObject* __Pyx_ImportFrom(PyObject* module, PyObject* name) { + PyObject* value = __Pyx_PyObject_GetAttrStr(module, name); + if (unlikely(!value) && PyErr_ExceptionMatches(PyExc_AttributeError)) { + PyErr_Format(PyExc_ImportError, + #if PY_MAJOR_VERSION < 3 + "cannot import name %.230s", PyString_AS_STRING(name)); + #else + "cannot import name %S", name); + #endif + } + return value; +} + +/* HasAttr */ + static CYTHON_INLINE int __Pyx_HasAttr(PyObject *o, PyObject *n) { + PyObject *r; + if (unlikely(!__Pyx_PyBaseString_Check(n))) { + PyErr_SetString(PyExc_TypeError, + "hasattr(): attribute name must be string"); + return -1; + } + r = __Pyx_GetAttr(o, n); + if (unlikely(!r)) { + PyErr_Clear(); + return 0; + } else { + Py_DECREF(r); + return 1; + } +} + +/* RaiseNoneIterError */ + static CYTHON_INLINE void __Pyx_RaiseNoneNotIterableError(void) { PyErr_SetString(PyExc_TypeError, "'NoneType' object is not iterable"); } -static int __Pyx_call_next_tp_traverse(PyObject* obj, visitproc v, void *a, traverseproc current_tp_traverse) { +/* GetTopmostException */ + #if CYTHON_USE_EXC_INFO_STACK +static _PyErr_StackItem * +__Pyx_PyErr_GetTopmostException(PyThreadState *tstate) +{ + _PyErr_StackItem *exc_info = tstate->exc_info; + while ((exc_info->exc_type == NULL || exc_info->exc_type == Py_None) && + exc_info->previous_item != NULL) + { + exc_info = exc_info->previous_item; + } + return exc_info; +} +#endif + +/* SaveResetException */ + #if CYTHON_FAST_THREAD_STATE +static CYTHON_INLINE void __Pyx__ExceptionSave(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb) { + #if CYTHON_USE_EXC_INFO_STACK + _PyErr_StackItem *exc_info = __Pyx_PyErr_GetTopmostException(tstate); + *type = exc_info->exc_type; + *value = exc_info->exc_value; + *tb = exc_info->exc_traceback; + #else + *type = tstate->exc_type; + *value = tstate->exc_value; + *tb = tstate->exc_traceback; + #endif + Py_XINCREF(*type); + Py_XINCREF(*value); + Py_XINCREF(*tb); +} +static CYTHON_INLINE void __Pyx__ExceptionReset(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb) { + PyObject *tmp_type, *tmp_value, *tmp_tb; + #if CYTHON_USE_EXC_INFO_STACK + _PyErr_StackItem *exc_info = tstate->exc_info; + tmp_type = exc_info->exc_type; + tmp_value = exc_info->exc_value; + tmp_tb = exc_info->exc_traceback; + exc_info->exc_type = type; + exc_info->exc_value = value; + exc_info->exc_traceback = tb; + #else + tmp_type = tstate->exc_type; + tmp_value = tstate->exc_value; + tmp_tb = tstate->exc_traceback; + tstate->exc_type = type; + tstate->exc_value = value; + tstate->exc_traceback = tb; + #endif + Py_XDECREF(tmp_type); + Py_XDECREF(tmp_value); + Py_XDECREF(tmp_tb); +} +#endif + +/* GetException */ + #if CYTHON_FAST_THREAD_STATE +static int __Pyx__GetException(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb) +#else +static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb) +#endif +{ + PyObject *local_type, *local_value, *local_tb; +#if CYTHON_FAST_THREAD_STATE + PyObject *tmp_type, *tmp_value, *tmp_tb; + local_type = tstate->curexc_type; + local_value = tstate->curexc_value; + local_tb = tstate->curexc_traceback; + tstate->curexc_type = 0; + tstate->curexc_value = 0; + tstate->curexc_traceback = 0; +#else + PyErr_Fetch(&local_type, &local_value, &local_tb); +#endif + PyErr_NormalizeException(&local_type, &local_value, &local_tb); +#if CYTHON_FAST_THREAD_STATE + if (unlikely(tstate->curexc_type)) +#else + if (unlikely(PyErr_Occurred())) +#endif + goto bad; + #if PY_MAJOR_VERSION >= 3 + if (local_tb) { + if (unlikely(PyException_SetTraceback(local_value, local_tb) < 0)) + goto bad; + } + #endif + Py_XINCREF(local_tb); + Py_XINCREF(local_type); + Py_XINCREF(local_value); + *type = local_type; + *value = local_value; + *tb = local_tb; +#if CYTHON_FAST_THREAD_STATE + #if CYTHON_USE_EXC_INFO_STACK + { + _PyErr_StackItem *exc_info = tstate->exc_info; + tmp_type = exc_info->exc_type; + tmp_value = exc_info->exc_value; + tmp_tb = exc_info->exc_traceback; + exc_info->exc_type = local_type; + exc_info->exc_value = local_value; + exc_info->exc_traceback = local_tb; + } + #else + tmp_type = tstate->exc_type; + tmp_value = tstate->exc_value; + tmp_tb = tstate->exc_traceback; + tstate->exc_type = local_type; + tstate->exc_value = local_value; + tstate->exc_traceback = local_tb; + #endif + Py_XDECREF(tmp_type); + Py_XDECREF(tmp_value); + Py_XDECREF(tmp_tb); +#else + PyErr_SetExcInfo(local_type, local_value, local_tb); +#endif + return 0; +bad: + *type = 0; + *value = 0; + *tb = 0; + Py_XDECREF(local_type); + Py_XDECREF(local_value); + Py_XDECREF(local_tb); + return -1; +} + +/* CallNextTpTraverse */ + static int __Pyx_call_next_tp_traverse(PyObject* obj, visitproc v, void *a, traverseproc current_tp_traverse) { PyTypeObject* type = Py_TYPE(obj); while (type && type->tp_traverse != current_tp_traverse) type = type->tp_base; @@ -26327,7 +35430,8 @@ static int __Pyx_call_next_tp_traverse(PyObject* obj, visitproc v, void *a, trav return 0; } -static void __Pyx_call_next_tp_clear(PyObject* obj, inquiry current_tp_clear) { +/* CallNextTpClear */ + static void __Pyx_call_next_tp_clear(PyObject* obj, inquiry current_tp_clear) { PyTypeObject* type = Py_TYPE(obj); while (type && type->tp_clear != current_tp_clear) type = type->tp_base; @@ -26337,7 +35441,58 @@ static void __Pyx_call_next_tp_clear(PyObject* obj, inquiry current_tp_clear) { type->tp_clear(obj); } -static int __Pyx_SetVtable(PyObject *dict, void *vtable) { +/* PyObject_GenericGetAttrNoDict */ + #if CYTHON_USE_TYPE_SLOTS && CYTHON_USE_PYTYPE_LOOKUP && PY_VERSION_HEX < 0x03070000 +static PyObject *__Pyx_RaiseGenericGetAttributeError(PyTypeObject *tp, PyObject *attr_name) { + PyErr_Format(PyExc_AttributeError, +#if PY_MAJOR_VERSION >= 3 + "'%.50s' object has no attribute '%U'", + tp->tp_name, attr_name); +#else + "'%.50s' object has no attribute '%.400s'", + tp->tp_name, PyString_AS_STRING(attr_name)); +#endif + return NULL; +} +static CYTHON_INLINE PyObject* __Pyx_PyObject_GenericGetAttrNoDict(PyObject* obj, PyObject* attr_name) { + PyObject *descr; + PyTypeObject *tp = Py_TYPE(obj); + if (unlikely(!PyString_Check(attr_name))) { + return PyObject_GenericGetAttr(obj, attr_name); + } + assert(!tp->tp_dictoffset); + descr = _PyType_Lookup(tp, attr_name); + if (unlikely(!descr)) { + return __Pyx_RaiseGenericGetAttributeError(tp, attr_name); + } + Py_INCREF(descr); + #if PY_MAJOR_VERSION < 3 + if (likely(PyType_HasFeature(Py_TYPE(descr), Py_TPFLAGS_HAVE_CLASS))) + #endif + { + descrgetfunc f = Py_TYPE(descr)->tp_descr_get; + if (unlikely(f)) { + PyObject *res = f(descr, obj, (PyObject *)tp); + Py_DECREF(descr); + return res; + } + } + return descr; +} +#endif + +/* PyObject_GenericGetAttr */ + #if CYTHON_USE_TYPE_SLOTS && CYTHON_USE_PYTYPE_LOOKUP && PY_VERSION_HEX < 0x03070000 +static PyObject* __Pyx_PyObject_GenericGetAttr(PyObject* obj, PyObject* attr_name) { + if (unlikely(Py_TYPE(obj)->tp_dictoffset)) { + return PyObject_GenericGetAttr(obj, attr_name); + } + return __Pyx_PyObject_GenericGetAttrNoDict(obj, attr_name); +} +#endif + +/* SetVTable */ + static int __Pyx_SetVtable(PyObject *dict, void *vtable) { #if PY_VERSION_HEX >= 0x02070000 PyObject *ob = PyCapsule_New(vtable, 0, 0); #else @@ -26354,13 +35509,193 @@ bad: return -1; } -static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) { +/* SetupReduce */ + static int __Pyx_setup_reduce_is_named(PyObject* meth, PyObject* name) { + int ret; + PyObject *name_attr; + name_attr = __Pyx_PyObject_GetAttrStr(meth, __pyx_n_s_name); + if (likely(name_attr)) { + ret = PyObject_RichCompareBool(name_attr, name, Py_EQ); + } else { + ret = -1; + } + if (unlikely(ret < 0)) { + PyErr_Clear(); + ret = 0; + } + Py_XDECREF(name_attr); + return ret; +} +static int __Pyx_setup_reduce(PyObject* type_obj) { + int ret = 0; + PyObject *object_reduce = NULL; + PyObject *object_reduce_ex = NULL; + PyObject *reduce = NULL; + PyObject *reduce_ex = NULL; + PyObject *reduce_cython = NULL; + PyObject *setstate = NULL; + PyObject *setstate_cython = NULL; +#if CYTHON_USE_PYTYPE_LOOKUP + if (_PyType_Lookup((PyTypeObject*)type_obj, __pyx_n_s_getstate)) goto GOOD; +#else + if (PyObject_HasAttr(type_obj, __pyx_n_s_getstate)) goto GOOD; +#endif +#if CYTHON_USE_PYTYPE_LOOKUP + object_reduce_ex = _PyType_Lookup(&PyBaseObject_Type, __pyx_n_s_reduce_ex); if (!object_reduce_ex) goto BAD; +#else + object_reduce_ex = __Pyx_PyObject_GetAttrStr((PyObject*)&PyBaseObject_Type, __pyx_n_s_reduce_ex); if (!object_reduce_ex) goto BAD; +#endif + reduce_ex = __Pyx_PyObject_GetAttrStr(type_obj, __pyx_n_s_reduce_ex); if (unlikely(!reduce_ex)) goto BAD; + if (reduce_ex == object_reduce_ex) { +#if CYTHON_USE_PYTYPE_LOOKUP + object_reduce = _PyType_Lookup(&PyBaseObject_Type, __pyx_n_s_reduce); if (!object_reduce) goto BAD; +#else + object_reduce = __Pyx_PyObject_GetAttrStr((PyObject*)&PyBaseObject_Type, __pyx_n_s_reduce); if (!object_reduce) goto BAD; +#endif + reduce = __Pyx_PyObject_GetAttrStr(type_obj, __pyx_n_s_reduce); if (unlikely(!reduce)) goto BAD; + if (reduce == object_reduce || __Pyx_setup_reduce_is_named(reduce, __pyx_n_s_reduce_cython)) { + reduce_cython = __Pyx_PyObject_GetAttrStr(type_obj, __pyx_n_s_reduce_cython); if (unlikely(!reduce_cython)) goto BAD; + ret = PyDict_SetItem(((PyTypeObject*)type_obj)->tp_dict, __pyx_n_s_reduce, reduce_cython); if (unlikely(ret < 0)) goto BAD; + ret = PyDict_DelItem(((PyTypeObject*)type_obj)->tp_dict, __pyx_n_s_reduce_cython); if (unlikely(ret < 0)) goto BAD; + setstate = __Pyx_PyObject_GetAttrStr(type_obj, __pyx_n_s_setstate); + if (!setstate) PyErr_Clear(); + if (!setstate || __Pyx_setup_reduce_is_named(setstate, __pyx_n_s_setstate_cython)) { + setstate_cython = __Pyx_PyObject_GetAttrStr(type_obj, __pyx_n_s_setstate_cython); if (unlikely(!setstate_cython)) goto BAD; + ret = PyDict_SetItem(((PyTypeObject*)type_obj)->tp_dict, __pyx_n_s_setstate, setstate_cython); if (unlikely(ret < 0)) goto BAD; + ret = PyDict_DelItem(((PyTypeObject*)type_obj)->tp_dict, __pyx_n_s_setstate_cython); if (unlikely(ret < 0)) goto BAD; + } + PyType_Modified((PyTypeObject*)type_obj); + } + } + goto GOOD; +BAD: + if (!PyErr_Occurred()) + PyErr_Format(PyExc_RuntimeError, "Unable to initialize pickling for %s", ((PyTypeObject*)type_obj)->tp_name); + ret = -1; +GOOD: +#if !CYTHON_USE_PYTYPE_LOOKUP + Py_XDECREF(object_reduce); + Py_XDECREF(object_reduce_ex); +#endif + Py_XDECREF(reduce); + Py_XDECREF(reduce_ex); + Py_XDECREF(reduce_cython); + Py_XDECREF(setstate); + Py_XDECREF(setstate_cython); + return ret; +} + +/* TypeImport */ + #ifndef __PYX_HAVE_RT_ImportType +#define __PYX_HAVE_RT_ImportType +static PyTypeObject *__Pyx_ImportType(PyObject *module, const char *module_name, const char *class_name, + size_t size, enum __Pyx_ImportType_CheckSize check_size) +{ + PyObject *result = 0; + char warning[200]; + Py_ssize_t basicsize; +#ifdef Py_LIMITED_API + PyObject *py_basicsize; +#endif + result = PyObject_GetAttrString(module, class_name); + if (!result) + goto bad; + if (!PyType_Check(result)) { + PyErr_Format(PyExc_TypeError, + "%.200s.%.200s is not a type object", + module_name, class_name); + goto bad; + } +#ifndef Py_LIMITED_API + basicsize = ((PyTypeObject *)result)->tp_basicsize; +#else + py_basicsize = PyObject_GetAttrString(result, "__basicsize__"); + if (!py_basicsize) + goto bad; + basicsize = PyLong_AsSsize_t(py_basicsize); + Py_DECREF(py_basicsize); + py_basicsize = 0; + if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred()) + goto bad; +#endif + if ((size_t)basicsize < size) { + PyErr_Format(PyExc_ValueError, + "%.200s.%.200s size changed, may indicate binary incompatibility. " + "Expected %zd from C header, got %zd from PyObject", + module_name, class_name, size, basicsize); + goto bad; + } + if (check_size == __Pyx_ImportType_CheckSize_Error && (size_t)basicsize != size) { + PyErr_Format(PyExc_ValueError, + "%.200s.%.200s size changed, may indicate binary incompatibility. " + "Expected %zd from C header, got %zd from PyObject", + module_name, class_name, size, basicsize); + goto bad; + } + else if (check_size == __Pyx_ImportType_CheckSize_Warn && (size_t)basicsize > size) { + PyOS_snprintf(warning, sizeof(warning), + "%s.%s size changed, may indicate binary incompatibility. " + "Expected %zd from C header, got %zd from PyObject", + module_name, class_name, size, basicsize); + if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad; + } + return (PyTypeObject *)result; +bad: + Py_XDECREF(result); + return NULL; +} +#endif + +/* CLineInTraceback */ + #ifndef CYTHON_CLINE_IN_TRACEBACK +static int __Pyx_CLineForTraceback(PyThreadState *tstate, int c_line) { + PyObject *use_cline; + PyObject *ptype, *pvalue, *ptraceback; +#if CYTHON_COMPILING_IN_CPYTHON + PyObject **cython_runtime_dict; +#endif + if (unlikely(!__pyx_cython_runtime)) { + return c_line; + } + __Pyx_ErrFetchInState(tstate, &ptype, &pvalue, &ptraceback); +#if CYTHON_COMPILING_IN_CPYTHON + cython_runtime_dict = _PyObject_GetDictPtr(__pyx_cython_runtime); + if (likely(cython_runtime_dict)) { + __PYX_PY_DICT_LOOKUP_IF_MODIFIED( + use_cline, *cython_runtime_dict, + __Pyx_PyDict_GetItemStr(*cython_runtime_dict, __pyx_n_s_cline_in_traceback)) + } else +#endif + { + PyObject *use_cline_obj = __Pyx_PyObject_GetAttrStr(__pyx_cython_runtime, __pyx_n_s_cline_in_traceback); + if (use_cline_obj) { + use_cline = PyObject_Not(use_cline_obj) ? Py_False : Py_True; + Py_DECREF(use_cline_obj); + } else { + PyErr_Clear(); + use_cline = NULL; + } + } + if (!use_cline) { + c_line = 0; + PyObject_SetAttr(__pyx_cython_runtime, __pyx_n_s_cline_in_traceback, Py_False); + } + else if (use_cline == Py_False || (use_cline != Py_True && PyObject_Not(use_cline) != 0)) { + c_line = 0; + } + __Pyx_ErrRestoreInState(tstate, ptype, pvalue, ptraceback); + return c_line; +} +#endif + +/* CodeObjectCache */ + static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) { int start = 0, mid = 0, end = count - 1; if (end >= 0 && code_line > entries[end].code_line) { return count; } while (start < end) { - mid = (start + end) / 2; + mid = start + (end - start) / 2; if (code_line < entries[mid].code_line) { end = mid; } else if (code_line > entries[mid].code_line) { @@ -26433,7 +35768,8 @@ static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) { Py_INCREF(code_object); } -#include "compile.h" +/* AddTraceback */ + #include "compile.h" #include "frameobject.h" #include "traceback.h" static PyCodeObject* __Pyx_CreateCodeObjectForTraceback( @@ -26492,31 +35828,88 @@ static void __Pyx_AddTraceback(const char *funcname, int c_line, int py_line, const char *filename) { PyCodeObject *py_code = 0; PyFrameObject *py_frame = 0; - py_code = __pyx_find_code_object(c_line ? c_line : py_line); + PyThreadState *tstate = __Pyx_PyThreadState_Current; + if (c_line) { + c_line = __Pyx_CLineForTraceback(tstate, c_line); + } + py_code = __pyx_find_code_object(c_line ? -c_line : py_line); if (!py_code) { py_code = __Pyx_CreateCodeObjectForTraceback( funcname, c_line, py_line, filename); if (!py_code) goto bad; - __pyx_insert_code_object(c_line ? c_line : py_line, py_code); + __pyx_insert_code_object(c_line ? -c_line : py_line, py_code); } py_frame = PyFrame_New( - PyThreadState_GET(), /*PyThreadState *tstate,*/ - py_code, /*PyCodeObject *code,*/ - __pyx_d, /*PyObject *globals,*/ - 0 /*PyObject *locals*/ + tstate, /*PyThreadState *tstate,*/ + py_code, /*PyCodeObject *code,*/ + __pyx_d, /*PyObject *globals,*/ + 0 /*PyObject *locals*/ ); if (!py_frame) goto bad; - py_frame->f_lineno = py_line; + __Pyx_PyFrame_SetLineNumber(py_frame, py_line); PyTraceBack_Here(py_frame); bad: Py_XDECREF(py_code); Py_XDECREF(py_frame); } +/* CIntToPy */ + static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value) { + const int neg_one = (int) ((int) 0 - (int) 1), const_zero = (int) 0; + const int is_unsigned = neg_one > const_zero; + if (is_unsigned) { + if (sizeof(int) < sizeof(long)) { + return PyInt_FromLong((long) value); + } else if (sizeof(int) <= sizeof(unsigned long)) { + return PyLong_FromUnsignedLong((unsigned long) value); +#ifdef HAVE_LONG_LONG + } else if (sizeof(int) <= sizeof(unsigned PY_LONG_LONG)) { + return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); +#endif + } + } else { + if (sizeof(int) <= sizeof(long)) { + return PyInt_FromLong((long) value); +#ifdef HAVE_LONG_LONG + } else if (sizeof(int) <= sizeof(PY_LONG_LONG)) { + return PyLong_FromLongLong((PY_LONG_LONG) value); +#endif + } + } + { + int one = 1; int little = (int)*(unsigned char *)&one; + unsigned char *bytes = (unsigned char *)&value; + return _PyLong_FromByteArray(bytes, sizeof(int), + little, !is_unsigned); + } +} + +/* CIntFromPyVerify */ + #define __PYX_VERIFY_RETURN_INT(target_type, func_type, func_value)\ + __PYX__VERIFY_RETURN_INT(target_type, func_type, func_value, 0) +#define __PYX_VERIFY_RETURN_INT_EXC(target_type, func_type, func_value)\ + __PYX__VERIFY_RETURN_INT(target_type, func_type, func_value, 1) +#define __PYX__VERIFY_RETURN_INT(target_type, func_type, func_value, exc)\ + {\ + func_type value = func_value;\ + if (sizeof(target_type) < sizeof(func_type)) {\ + if (unlikely(value != (func_type) (target_type) value)) {\ + func_type zero = 0;\ + if (exc && unlikely(value == (func_type)-1 && PyErr_Occurred()))\ + return (target_type) -1;\ + if (is_unsigned && unlikely(value < zero))\ + goto raise_neg_overflow;\ + else\ + goto raise_overflow;\ + }\ + }\ + return (target_type) value;\ + } + #if PY_MAJOR_VERSION < 3 static int __Pyx_GetBuffer(PyObject *obj, Py_buffer *view, int flags) { if (PyObject_CheckBuffer(obj)) return PyObject_GetBuffer(obj, view, flags); - if (PyObject_TypeCheck(obj, __pyx_ptype_5numpy_ndarray)) return __pyx_pw_5numpy_7ndarray_1__getbuffer__(obj, view, flags); + if (__Pyx_TypeCheck(obj, __pyx_ptype_5numpy_ndarray)) return __pyx_pw_5numpy_7ndarray_1__getbuffer__(obj, view, flags); PyErr_Format(PyExc_TypeError, "'%.200s' does not have the buffer interface", Py_TYPE(obj)->tp_name); return -1; } @@ -26527,109 +35920,420 @@ static void __Pyx_ReleaseBuffer(Py_buffer *view) { PyBuffer_Release(view); return; } - if (PyObject_TypeCheck(obj, __pyx_ptype_5numpy_ndarray)) { __pyx_pw_5numpy_7ndarray_3__releasebuffer__(obj, view); return; } - Py_DECREF(obj); + if ((0)) {} + else if (__Pyx_TypeCheck(obj, __pyx_ptype_5numpy_ndarray)) __pyx_pw_5numpy_7ndarray_3__releasebuffer__(obj, view); view->obj = NULL; + Py_DECREF(obj); } #endif - static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level) { - PyObject *empty_list = 0; - PyObject *module = 0; - PyObject *global_dict = 0; - PyObject *empty_dict = 0; - PyObject *list; - #if PY_VERSION_HEX < 0x03030000 - PyObject *py_import; - py_import = __Pyx_PyObject_GetAttrStr(__pyx_b, __pyx_n_s_import); - if (!py_import) - goto bad; - #endif - if (from_list) - list = from_list; - else { - empty_list = PyList_New(0); - if (!empty_list) - goto bad; - list = empty_list; + /* CIntToPy */ + static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) { + const long neg_one = (long) ((long) 0 - (long) 1), const_zero = (long) 0; + const int is_unsigned = neg_one > const_zero; + if (is_unsigned) { + if (sizeof(long) < sizeof(long)) { + return PyInt_FromLong((long) value); + } else if (sizeof(long) <= sizeof(unsigned long)) { + return PyLong_FromUnsignedLong((unsigned long) value); +#ifdef HAVE_LONG_LONG + } else if (sizeof(long) <= sizeof(unsigned PY_LONG_LONG)) { + return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); +#endif + } + } else { + if (sizeof(long) <= sizeof(long)) { + return PyInt_FromLong((long) value); +#ifdef HAVE_LONG_LONG + } else if (sizeof(long) <= sizeof(PY_LONG_LONG)) { + return PyLong_FromLongLong((PY_LONG_LONG) value); +#endif + } } - global_dict = PyModule_GetDict(__pyx_m); - if (!global_dict) - goto bad; - empty_dict = PyDict_New(); - if (!empty_dict) - goto bad; { - #if PY_MAJOR_VERSION >= 3 - if (level == -1) { - if (strchr(__Pyx_MODULE_NAME, '.')) { - #if PY_VERSION_HEX < 0x03030000 - PyObject *py_level = PyInt_FromLong(1); - if (!py_level) - goto bad; - module = PyObject_CallFunctionObjArgs(py_import, - name, global_dict, empty_dict, list, py_level, NULL); - Py_DECREF(py_level); - #else - module = PyImport_ImportModuleLevelObject( - name, global_dict, empty_dict, list, 1); - #endif - if (!module) { - if (!PyErr_ExceptionMatches(PyExc_ImportError)) - goto bad; - PyErr_Clear(); + int one = 1; int little = (int)*(unsigned char *)&one; + unsigned char *bytes = (unsigned char *)&value; + return _PyLong_FromByteArray(bytes, sizeof(long), + little, !is_unsigned); + } +} + +/* CIntToPy */ + static CYTHON_INLINE PyObject* __Pyx_PyInt_From_Py_intptr_t(Py_intptr_t value) { + const Py_intptr_t neg_one = (Py_intptr_t) ((Py_intptr_t) 0 - (Py_intptr_t) 1), const_zero = (Py_intptr_t) 0; + const int is_unsigned = neg_one > const_zero; + if (is_unsigned) { + if (sizeof(Py_intptr_t) < sizeof(long)) { + return PyInt_FromLong((long) value); + } else if (sizeof(Py_intptr_t) <= sizeof(unsigned long)) { + return PyLong_FromUnsignedLong((unsigned long) value); +#ifdef HAVE_LONG_LONG + } else if (sizeof(Py_intptr_t) <= sizeof(unsigned PY_LONG_LONG)) { + return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); +#endif + } + } else { + if (sizeof(Py_intptr_t) <= sizeof(long)) { + return PyInt_FromLong((long) value); +#ifdef HAVE_LONG_LONG + } else if (sizeof(Py_intptr_t) <= sizeof(PY_LONG_LONG)) { + return PyLong_FromLongLong((PY_LONG_LONG) value); +#endif + } + } + { + int one = 1; int little = (int)*(unsigned char *)&one; + unsigned char *bytes = (unsigned char *)&value; + return _PyLong_FromByteArray(bytes, sizeof(Py_intptr_t), + little, !is_unsigned); + } +} + +/* Declarations */ + #if CYTHON_CCOMPLEX + #ifdef __cplusplus + static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) { + return ::std::complex< float >(x, y); + } + #else + static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) { + return x + y*(__pyx_t_float_complex)_Complex_I; + } + #endif +#else + static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) { + __pyx_t_float_complex z; + z.real = x; + z.imag = y; + return z; + } +#endif + +/* Arithmetic */ + #if CYTHON_CCOMPLEX +#else + static CYTHON_INLINE int __Pyx_c_eq_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { + return (a.real == b.real) && (a.imag == b.imag); + } + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sum_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { + __pyx_t_float_complex z; + z.real = a.real + b.real; + z.imag = a.imag + b.imag; + return z; + } + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_diff_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { + __pyx_t_float_complex z; + z.real = a.real - b.real; + z.imag = a.imag - b.imag; + return z; + } + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_prod_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { + __pyx_t_float_complex z; + z.real = a.real * b.real - a.imag * b.imag; + z.imag = a.real * b.imag + a.imag * b.real; + return z; + } + #if 1 + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quot_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { + if (b.imag == 0) { + return __pyx_t_float_complex_from_parts(a.real / b.real, a.imag / b.real); + } else if (fabsf(b.real) >= fabsf(b.imag)) { + if (b.real == 0 && b.imag == 0) { + return __pyx_t_float_complex_from_parts(a.real / b.real, a.imag / b.imag); + } else { + float r = b.imag / b.real; + float s = 1.0 / (b.real + b.imag * r); + return __pyx_t_float_complex_from_parts( + (a.real + a.imag * r) * s, (a.imag - a.real * r) * s); + } + } else { + float r = b.real / b.imag; + float s = 1.0 / (b.imag + b.real * r); + return __pyx_t_float_complex_from_parts( + (a.real * r + a.imag) * s, (a.imag * r - a.real) * s); + } + } + #else + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quot_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { + if (b.imag == 0) { + return __pyx_t_float_complex_from_parts(a.real / b.real, a.imag / b.real); + } else { + float denom = b.real * b.real + b.imag * b.imag; + return __pyx_t_float_complex_from_parts( + (a.real * b.real + a.imag * b.imag) / denom, + (a.imag * b.real - a.real * b.imag) / denom); + } + } + #endif + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_neg_float(__pyx_t_float_complex a) { + __pyx_t_float_complex z; + z.real = -a.real; + z.imag = -a.imag; + return z; + } + static CYTHON_INLINE int __Pyx_c_is_zero_float(__pyx_t_float_complex a) { + return (a.real == 0) && (a.imag == 0); + } + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conj_float(__pyx_t_float_complex a) { + __pyx_t_float_complex z; + z.real = a.real; + z.imag = -a.imag; + return z; + } + #if 1 + static CYTHON_INLINE float __Pyx_c_abs_float(__pyx_t_float_complex z) { + #if !defined(HAVE_HYPOT) || defined(_MSC_VER) + return sqrtf(z.real*z.real + z.imag*z.imag); + #else + return hypotf(z.real, z.imag); + #endif + } + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_pow_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { + __pyx_t_float_complex z; + float r, lnr, theta, z_r, z_theta; + if (b.imag == 0 && b.real == (int)b.real) { + if (b.real < 0) { + float denom = a.real * a.real + a.imag * a.imag; + a.real = a.real / denom; + a.imag = -a.imag / denom; + b.real = -b.real; + } + switch ((int)b.real) { + case 0: + z.real = 1; + z.imag = 0; + return z; + case 1: + return a; + case 2: + z = __Pyx_c_prod_float(a, a); + return __Pyx_c_prod_float(a, a); + case 3: + z = __Pyx_c_prod_float(a, a); + return __Pyx_c_prod_float(z, a); + case 4: + z = __Pyx_c_prod_float(a, a); + return __Pyx_c_prod_float(z, z); } } - level = 0; + if (a.imag == 0) { + if (a.real == 0) { + return a; + } else if (b.imag == 0) { + z.real = powf(a.real, b.real); + z.imag = 0; + return z; + } else if (a.real > 0) { + r = a.real; + theta = 0; + } else { + r = -a.real; + theta = atan2f(0, -1); + } + } else { + r = __Pyx_c_abs_float(a); + theta = atan2f(a.imag, a.real); + } + lnr = logf(r); + z_r = expf(lnr * b.real - theta * b.imag); + z_theta = theta * b.real + lnr * b.imag; + z.real = z_r * cosf(z_theta); + z.imag = z_r * sinf(z_theta); + return z; } - #endif - if (!module) { - #if PY_VERSION_HEX < 0x03030000 - PyObject *py_level = PyInt_FromLong(level); - if (!py_level) - goto bad; - module = PyObject_CallFunctionObjArgs(py_import, - name, global_dict, empty_dict, list, py_level, NULL); - Py_DECREF(py_level); - #else - module = PyImport_ImportModuleLevelObject( - name, global_dict, empty_dict, list, level); - #endif - } - } -bad: - #if PY_VERSION_HEX < 0x03030000 - Py_XDECREF(py_import); #endif - Py_XDECREF(empty_list); - Py_XDECREF(empty_dict); - return module; -} - -#define __PYX_VERIFY_RETURN_INT(target_type, func_type, func_value) \ - { \ - func_type value = func_value; \ - if (sizeof(target_type) < sizeof(func_type)) { \ - if (unlikely(value != (func_type) (target_type) value)) { \ - func_type zero = 0; \ - if (is_unsigned && unlikely(value < zero)) \ - goto raise_neg_overflow; \ - else \ - goto raise_overflow; \ - } \ - } \ - return (target_type) value; \ - } - -#if CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3 - #if CYTHON_USE_PYLONG_INTERNALS - #include "longintrepr.h" - #endif #endif -static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { - const int neg_one = (int) -1, const_zero = 0; +/* Declarations */ + #if CYTHON_CCOMPLEX + #ifdef __cplusplus + static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) { + return ::std::complex< double >(x, y); + } + #else + static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) { + return x + y*(__pyx_t_double_complex)_Complex_I; + } + #endif +#else + static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) { + __pyx_t_double_complex z; + z.real = x; + z.imag = y; + return z; + } +#endif + +/* Arithmetic */ + #if CYTHON_CCOMPLEX +#else + static CYTHON_INLINE int __Pyx_c_eq_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { + return (a.real == b.real) && (a.imag == b.imag); + } + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { + __pyx_t_double_complex z; + z.real = a.real + b.real; + z.imag = a.imag + b.imag; + return z; + } + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { + __pyx_t_double_complex z; + z.real = a.real - b.real; + z.imag = a.imag - b.imag; + return z; + } + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_prod_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { + __pyx_t_double_complex z; + z.real = a.real * b.real - a.imag * b.imag; + z.imag = a.real * b.imag + a.imag * b.real; + return z; + } + #if 1 + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { + if (b.imag == 0) { + return __pyx_t_double_complex_from_parts(a.real / b.real, a.imag / b.real); + } else if (fabs(b.real) >= fabs(b.imag)) { + if (b.real == 0 && b.imag == 0) { + return __pyx_t_double_complex_from_parts(a.real / b.real, a.imag / b.imag); + } else { + double r = b.imag / b.real; + double s = 1.0 / (b.real + b.imag * r); + return __pyx_t_double_complex_from_parts( + (a.real + a.imag * r) * s, (a.imag - a.real * r) * s); + } + } else { + double r = b.real / b.imag; + double s = 1.0 / (b.imag + b.real * r); + return __pyx_t_double_complex_from_parts( + (a.real * r + a.imag) * s, (a.imag * r - a.real) * s); + } + } + #else + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { + if (b.imag == 0) { + return __pyx_t_double_complex_from_parts(a.real / b.real, a.imag / b.real); + } else { + double denom = b.real * b.real + b.imag * b.imag; + return __pyx_t_double_complex_from_parts( + (a.real * b.real + a.imag * b.imag) / denom, + (a.imag * b.real - a.real * b.imag) / denom); + } + } + #endif + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg_double(__pyx_t_double_complex a) { + __pyx_t_double_complex z; + z.real = -a.real; + z.imag = -a.imag; + return z; + } + static CYTHON_INLINE int __Pyx_c_is_zero_double(__pyx_t_double_complex a) { + return (a.real == 0) && (a.imag == 0); + } + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj_double(__pyx_t_double_complex a) { + __pyx_t_double_complex z; + z.real = a.real; + z.imag = -a.imag; + return z; + } + #if 1 + static CYTHON_INLINE double __Pyx_c_abs_double(__pyx_t_double_complex z) { + #if !defined(HAVE_HYPOT) || defined(_MSC_VER) + return sqrt(z.real*z.real + z.imag*z.imag); + #else + return hypot(z.real, z.imag); + #endif + } + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { + __pyx_t_double_complex z; + double r, lnr, theta, z_r, z_theta; + if (b.imag == 0 && b.real == (int)b.real) { + if (b.real < 0) { + double denom = a.real * a.real + a.imag * a.imag; + a.real = a.real / denom; + a.imag = -a.imag / denom; + b.real = -b.real; + } + switch ((int)b.real) { + case 0: + z.real = 1; + z.imag = 0; + return z; + case 1: + return a; + case 2: + z = __Pyx_c_prod_double(a, a); + return __Pyx_c_prod_double(a, a); + case 3: + z = __Pyx_c_prod_double(a, a); + return __Pyx_c_prod_double(z, a); + case 4: + z = __Pyx_c_prod_double(a, a); + return __Pyx_c_prod_double(z, z); + } + } + if (a.imag == 0) { + if (a.real == 0) { + return a; + } else if (b.imag == 0) { + z.real = pow(a.real, b.real); + z.imag = 0; + return z; + } else if (a.real > 0) { + r = a.real; + theta = 0; + } else { + r = -a.real; + theta = atan2(0, -1); + } + } else { + r = __Pyx_c_abs_double(a); + theta = atan2(a.imag, a.real); + } + lnr = log(r); + z_r = exp(lnr * b.real - theta * b.imag); + z_theta = theta * b.real + lnr * b.imag; + z.real = z_r * cos(z_theta); + z.imag = z_r * sin(z_theta); + return z; + } + #endif +#endif + +/* CIntToPy */ + static CYTHON_INLINE PyObject* __Pyx_PyInt_From_enum__NPY_TYPES(enum NPY_TYPES value) { + const enum NPY_TYPES neg_one = (enum NPY_TYPES) ((enum NPY_TYPES) 0 - (enum NPY_TYPES) 1), const_zero = (enum NPY_TYPES) 0; + const int is_unsigned = neg_one > const_zero; + if (is_unsigned) { + if (sizeof(enum NPY_TYPES) < sizeof(long)) { + return PyInt_FromLong((long) value); + } else if (sizeof(enum NPY_TYPES) <= sizeof(unsigned long)) { + return PyLong_FromUnsignedLong((unsigned long) value); +#ifdef HAVE_LONG_LONG + } else if (sizeof(enum NPY_TYPES) <= sizeof(unsigned PY_LONG_LONG)) { + return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); +#endif + } + } else { + if (sizeof(enum NPY_TYPES) <= sizeof(long)) { + return PyInt_FromLong((long) value); +#ifdef HAVE_LONG_LONG + } else if (sizeof(enum NPY_TYPES) <= sizeof(PY_LONG_LONG)) { + return PyLong_FromLongLong((PY_LONG_LONG) value); +#endif + } + } + { + int one = 1; int little = (int)*(unsigned char *)&one; + unsigned char *bytes = (unsigned char *)&value; + return _PyLong_FromByteArray(bytes, sizeof(enum NPY_TYPES), + little, !is_unsigned); + } +} + +/* CIntFromPy */ + static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { + const int neg_one = (int) ((int) 0 - (int) 1), const_zero = (int) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { @@ -26646,36 +36350,129 @@ static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { -#if CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3 - #if CYTHON_USE_PYLONG_INTERNALS +#if CYTHON_USE_PYLONG_INTERNALS + const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { - case 0: return 0; - case 1: __PYX_VERIFY_RETURN_INT(int, digit, ((PyLongObject*)x)->ob_digit[0]); + case 0: return (int) 0; + case 1: __PYX_VERIFY_RETURN_INT(int, digit, digits[0]) + case 2: + if (8 * sizeof(int) > 1 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) >= 2 * PyLong_SHIFT) { + return (int) (((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0])); + } + } + break; + case 3: + if (8 * sizeof(int) > 2 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) >= 3 * PyLong_SHIFT) { + return (int) (((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0])); + } + } + break; + case 4: + if (8 * sizeof(int) > 3 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) >= 4 * PyLong_SHIFT) { + return (int) (((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0])); + } + } + break; } - #endif #endif +#if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } +#else + { + int result = PyObject_RichCompareBool(x, Py_False, Py_LT); + if (unlikely(result < 0)) + return (int) -1; + if (unlikely(result == 1)) + goto raise_neg_overflow; + } +#endif if (sizeof(int) <= sizeof(unsigned long)) { - __PYX_VERIFY_RETURN_INT(int, unsigned long, PyLong_AsUnsignedLong(x)) - } else if (sizeof(int) <= sizeof(unsigned long long)) { - __PYX_VERIFY_RETURN_INT(int, unsigned long long, PyLong_AsUnsignedLongLong(x)) + __PYX_VERIFY_RETURN_INT_EXC(int, unsigned long, PyLong_AsUnsignedLong(x)) +#ifdef HAVE_LONG_LONG + } else if (sizeof(int) <= sizeof(unsigned PY_LONG_LONG)) { + __PYX_VERIFY_RETURN_INT_EXC(int, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) +#endif } } else { -#if CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3 - #if CYTHON_USE_PYLONG_INTERNALS +#if CYTHON_USE_PYLONG_INTERNALS + const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { - case 0: return 0; - case 1: __PYX_VERIFY_RETURN_INT(int, digit, +(((PyLongObject*)x)->ob_digit[0])); - case -1: __PYX_VERIFY_RETURN_INT(int, sdigit, -(sdigit) ((PyLongObject*)x)->ob_digit[0]); + case 0: return (int) 0; + case -1: __PYX_VERIFY_RETURN_INT(int, sdigit, (sdigit) (-(sdigit)digits[0])) + case 1: __PYX_VERIFY_RETURN_INT(int, digit, +digits[0]) + case -2: + if (8 * sizeof(int) - 1 > 1 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) - 1 > 2 * PyLong_SHIFT) { + return (int) (((int)-1)*(((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); + } + } + break; + case 2: + if (8 * sizeof(int) > 1 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) - 1 > 2 * PyLong_SHIFT) { + return (int) ((((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); + } + } + break; + case -3: + if (8 * sizeof(int) - 1 > 2 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) - 1 > 3 * PyLong_SHIFT) { + return (int) (((int)-1)*(((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); + } + } + break; + case 3: + if (8 * sizeof(int) > 2 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) - 1 > 3 * PyLong_SHIFT) { + return (int) ((((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); + } + } + break; + case -4: + if (8 * sizeof(int) - 1 > 3 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) - 1 > 4 * PyLong_SHIFT) { + return (int) (((int)-1)*(((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); + } + } + break; + case 4: + if (8 * sizeof(int) > 3 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) - 1 > 4 * PyLong_SHIFT) { + return (int) ((((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); + } + } + break; } - #endif #endif if (sizeof(int) <= sizeof(long)) { - __PYX_VERIFY_RETURN_INT(int, long, PyLong_AsLong(x)) - } else if (sizeof(int) <= sizeof(long long)) { - __PYX_VERIFY_RETURN_INT(int, long long, PyLong_AsLongLong(x)) + __PYX_VERIFY_RETURN_INT_EXC(int, long, PyLong_AsLong(x)) +#ifdef HAVE_LONG_LONG + } else if (sizeof(int) <= sizeof(PY_LONG_LONG)) { + __PYX_VERIFY_RETURN_INT_EXC(int, PY_LONG_LONG, PyLong_AsLongLong(x)) +#endif } } { @@ -26684,7 +36481,7 @@ static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else int val; - PyObject *v = __Pyx_PyNumber_Int(x); + PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; @@ -26707,7 +36504,7 @@ static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { } } else { int val; - PyObject *tmp = __Pyx_PyNumber_Int(x); + PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (int) -1; val = __Pyx_PyInt_As_int(tmp); Py_DECREF(tmp); @@ -26723,8 +36520,9 @@ raise_neg_overflow: return (int) -1; } -static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { - const long neg_one = (long) -1, const_zero = 0; +/* CIntFromPy */ + static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { + const long neg_one = (long) ((long) 0 - (long) 1), const_zero = (long) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { @@ -26741,36 +36539,129 @@ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { -#if CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3 - #if CYTHON_USE_PYLONG_INTERNALS +#if CYTHON_USE_PYLONG_INTERNALS + const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { - case 0: return 0; - case 1: __PYX_VERIFY_RETURN_INT(long, digit, ((PyLongObject*)x)->ob_digit[0]); + case 0: return (long) 0; + case 1: __PYX_VERIFY_RETURN_INT(long, digit, digits[0]) + case 2: + if (8 * sizeof(long) > 1 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(long) >= 2 * PyLong_SHIFT) { + return (long) (((((long)digits[1]) << PyLong_SHIFT) | (long)digits[0])); + } + } + break; + case 3: + if (8 * sizeof(long) > 2 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(long) >= 3 * PyLong_SHIFT) { + return (long) (((((((long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0])); + } + } + break; + case 4: + if (8 * sizeof(long) > 3 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(long) >= 4 * PyLong_SHIFT) { + return (long) (((((((((long)digits[3]) << PyLong_SHIFT) | (long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0])); + } + } + break; } - #endif #endif +#if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } +#else + { + int result = PyObject_RichCompareBool(x, Py_False, Py_LT); + if (unlikely(result < 0)) + return (long) -1; + if (unlikely(result == 1)) + goto raise_neg_overflow; + } +#endif if (sizeof(long) <= sizeof(unsigned long)) { - __PYX_VERIFY_RETURN_INT(long, unsigned long, PyLong_AsUnsignedLong(x)) - } else if (sizeof(long) <= sizeof(unsigned long long)) { - __PYX_VERIFY_RETURN_INT(long, unsigned long long, PyLong_AsUnsignedLongLong(x)) + __PYX_VERIFY_RETURN_INT_EXC(long, unsigned long, PyLong_AsUnsignedLong(x)) +#ifdef HAVE_LONG_LONG + } else if (sizeof(long) <= sizeof(unsigned PY_LONG_LONG)) { + __PYX_VERIFY_RETURN_INT_EXC(long, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) +#endif } } else { -#if CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3 - #if CYTHON_USE_PYLONG_INTERNALS +#if CYTHON_USE_PYLONG_INTERNALS + const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { - case 0: return 0; - case 1: __PYX_VERIFY_RETURN_INT(long, digit, +(((PyLongObject*)x)->ob_digit[0])); - case -1: __PYX_VERIFY_RETURN_INT(long, sdigit, -(sdigit) ((PyLongObject*)x)->ob_digit[0]); + case 0: return (long) 0; + case -1: __PYX_VERIFY_RETURN_INT(long, sdigit, (sdigit) (-(sdigit)digits[0])) + case 1: __PYX_VERIFY_RETURN_INT(long, digit, +digits[0]) + case -2: + if (8 * sizeof(long) - 1 > 1 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(long, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) { + return (long) (((long)-1)*(((((long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); + } + } + break; + case 2: + if (8 * sizeof(long) > 1 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) { + return (long) ((((((long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); + } + } + break; + case -3: + if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(long, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) { + return (long) (((long)-1)*(((((((long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); + } + } + break; + case 3: + if (8 * sizeof(long) > 2 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) { + return (long) ((((((((long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); + } + } + break; + case -4: + if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(long, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(long) - 1 > 4 * PyLong_SHIFT) { + return (long) (((long)-1)*(((((((((long)digits[3]) << PyLong_SHIFT) | (long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); + } + } + break; + case 4: + if (8 * sizeof(long) > 3 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(long) - 1 > 4 * PyLong_SHIFT) { + return (long) ((((((((((long)digits[3]) << PyLong_SHIFT) | (long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); + } + } + break; } - #endif #endif if (sizeof(long) <= sizeof(long)) { - __PYX_VERIFY_RETURN_INT(long, long, PyLong_AsLong(x)) - } else if (sizeof(long) <= sizeof(long long)) { - __PYX_VERIFY_RETURN_INT(long, long long, PyLong_AsLongLong(x)) + __PYX_VERIFY_RETURN_INT_EXC(long, long, PyLong_AsLong(x)) +#ifdef HAVE_LONG_LONG + } else if (sizeof(long) <= sizeof(PY_LONG_LONG)) { + __PYX_VERIFY_RETURN_INT_EXC(long, PY_LONG_LONG, PyLong_AsLongLong(x)) +#endif } } { @@ -26779,7 +36670,7 @@ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else long val; - PyObject *v = __Pyx_PyNumber_Int(x); + PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; @@ -26802,7 +36693,7 @@ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { } } else { long val; - PyObject *tmp = __Pyx_PyNumber_Int(x); + PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (long) -1; val = __Pyx_PyInt_As_long(tmp); Py_DECREF(tmp); @@ -26818,325 +36709,108 @@ raise_neg_overflow: return (long) -1; } -static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value) { - const int neg_one = (int) -1, const_zero = 0; - const int is_unsigned = neg_one > const_zero; - if (is_unsigned) { - if (sizeof(int) < sizeof(long)) { - return PyInt_FromLong((long) value); - } else if (sizeof(int) <= sizeof(unsigned long)) { - return PyLong_FromUnsignedLong((unsigned long) value); - } else if (sizeof(int) <= sizeof(unsigned long long)) { - return PyLong_FromUnsignedLongLong((unsigned long long) value); - } - } else { - if (sizeof(int) <= sizeof(long)) { - return PyInt_FromLong((long) value); - } else if (sizeof(int) <= sizeof(long long)) { - return PyLong_FromLongLong((long long) value); - } - } - { - int one = 1; int little = (int)*(unsigned char *)&one; - unsigned char *bytes = (unsigned char *)&value; - return _PyLong_FromByteArray(bytes, sizeof(int), - little, !is_unsigned); +/* FastTypeChecks */ + #if CYTHON_COMPILING_IN_CPYTHON +static int __Pyx_InBases(PyTypeObject *a, PyTypeObject *b) { + while (a) { + a = a->tp_base; + if (a == b) + return 1; } + return b == &PyBaseObject_Type; } - -static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) { - const long neg_one = (long) -1, const_zero = 0; - const int is_unsigned = neg_one > const_zero; - if (is_unsigned) { - if (sizeof(long) < sizeof(long)) { - return PyInt_FromLong((long) value); - } else if (sizeof(long) <= sizeof(unsigned long)) { - return PyLong_FromUnsignedLong((unsigned long) value); - } else if (sizeof(long) <= sizeof(unsigned long long)) { - return PyLong_FromUnsignedLongLong((unsigned long long) value); - } - } else { - if (sizeof(long) <= sizeof(long)) { - return PyInt_FromLong((long) value); - } else if (sizeof(long) <= sizeof(long long)) { - return PyLong_FromLongLong((long long) value); +static CYTHON_INLINE int __Pyx_IsSubtype(PyTypeObject *a, PyTypeObject *b) { + PyObject *mro; + if (a == b) return 1; + mro = a->tp_mro; + if (likely(mro)) { + Py_ssize_t i, n; + n = PyTuple_GET_SIZE(mro); + for (i = 0; i < n; i++) { + if (PyTuple_GET_ITEM(mro, i) == (PyObject *)b) + return 1; } + return 0; } - { - int one = 1; int little = (int)*(unsigned char *)&one; - unsigned char *bytes = (unsigned char *)&value; - return _PyLong_FromByteArray(bytes, sizeof(long), - little, !is_unsigned); - } + return __Pyx_InBases(a, b); } - -static CYTHON_INLINE PyObject* __Pyx_PyInt_From_Py_intptr_t(Py_intptr_t value) { - const Py_intptr_t neg_one = (Py_intptr_t) -1, const_zero = 0; - const int is_unsigned = neg_one > const_zero; - if (is_unsigned) { - if (sizeof(Py_intptr_t) < sizeof(long)) { - return PyInt_FromLong((long) value); - } else if (sizeof(Py_intptr_t) <= sizeof(unsigned long)) { - return PyLong_FromUnsignedLong((unsigned long) value); - } else if (sizeof(Py_intptr_t) <= sizeof(unsigned long long)) { - return PyLong_FromUnsignedLongLong((unsigned long long) value); - } - } else { - if (sizeof(Py_intptr_t) <= sizeof(long)) { - return PyInt_FromLong((long) value); - } else if (sizeof(Py_intptr_t) <= sizeof(long long)) { - return PyLong_FromLongLong((long long) value); +#if PY_MAJOR_VERSION == 2 +static int __Pyx_inner_PyErr_GivenExceptionMatches2(PyObject *err, PyObject* exc_type1, PyObject* exc_type2) { + PyObject *exception, *value, *tb; + int res; + __Pyx_PyThreadState_declare + __Pyx_PyThreadState_assign + __Pyx_ErrFetch(&exception, &value, &tb); + res = exc_type1 ? PyObject_IsSubclass(err, exc_type1) : 0; + if (unlikely(res == -1)) { + PyErr_WriteUnraisable(err); + res = 0; + } + if (!res) { + res = PyObject_IsSubclass(err, exc_type2); + if (unlikely(res == -1)) { + PyErr_WriteUnraisable(err); + res = 0; } } - { - int one = 1; int little = (int)*(unsigned char *)&one; - unsigned char *bytes = (unsigned char *)&value; - return _PyLong_FromByteArray(bytes, sizeof(Py_intptr_t), - little, !is_unsigned); - } + __Pyx_ErrRestore(exception, value, tb); + return res; } - -#if CYTHON_CCOMPLEX - #ifdef __cplusplus - static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) { - return ::std::complex< float >(x, y); - } - #else - static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) { - return x + y*(__pyx_t_float_complex)_Complex_I; - } - #endif #else - static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) { - __pyx_t_float_complex z; - z.real = x; - z.imag = y; - return z; +static CYTHON_INLINE int __Pyx_inner_PyErr_GivenExceptionMatches2(PyObject *err, PyObject* exc_type1, PyObject *exc_type2) { + int res = exc_type1 ? __Pyx_IsSubtype((PyTypeObject*)err, (PyTypeObject*)exc_type1) : 0; + if (!res) { + res = __Pyx_IsSubtype((PyTypeObject*)err, (PyTypeObject*)exc_type2); + } + return res; +} +#endif +static int __Pyx_PyErr_GivenExceptionMatchesTuple(PyObject *exc_type, PyObject *tuple) { + Py_ssize_t i, n; + assert(PyExceptionClass_Check(exc_type)); + n = PyTuple_GET_SIZE(tuple); +#if PY_MAJOR_VERSION >= 3 + for (i=0; i(x, y); - } - #else - static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) { - return x + y*(__pyx_t_double_complex)_Complex_I; - } - #endif -#else - static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) { - __pyx_t_double_complex z; - z.real = x; - z.imag = y; - return z; - } -#endif - -#if CYTHON_CCOMPLEX -#else - static CYTHON_INLINE int __Pyx_c_eq(__pyx_t_double_complex a, __pyx_t_double_complex b) { - return (a.real == b.real) && (a.imag == b.imag); - } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum(__pyx_t_double_complex a, __pyx_t_double_complex b) { - __pyx_t_double_complex z; - z.real = a.real + b.real; - z.imag = a.imag + b.imag; - return z; - } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff(__pyx_t_double_complex a, __pyx_t_double_complex b) { - __pyx_t_double_complex z; - z.real = a.real - b.real; - z.imag = a.imag - b.imag; - return z; - } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_prod(__pyx_t_double_complex a, __pyx_t_double_complex b) { - __pyx_t_double_complex z; - z.real = a.real * b.real - a.imag * b.imag; - z.imag = a.real * b.imag + a.imag * b.real; - return z; - } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot(__pyx_t_double_complex a, __pyx_t_double_complex b) { - __pyx_t_double_complex z; - double denom = b.real * b.real + b.imag * b.imag; - z.real = (a.real * b.real + a.imag * b.imag) / denom; - z.imag = (a.imag * b.real - a.real * b.imag) / denom; - return z; - } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg(__pyx_t_double_complex a) { - __pyx_t_double_complex z; - z.real = -a.real; - z.imag = -a.imag; - return z; - } - static CYTHON_INLINE int __Pyx_c_is_zero(__pyx_t_double_complex a) { - return (a.real == 0) && (a.imag == 0); - } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj(__pyx_t_double_complex a) { - __pyx_t_double_complex z; - z.real = a.real; - z.imag = -a.imag; - return z; - } - #if 1 - static CYTHON_INLINE double __Pyx_c_abs(__pyx_t_double_complex z) { - #if !defined(HAVE_HYPOT) || defined(_MSC_VER) - return sqrt(z.real*z.real + z.imag*z.imag); - #else - return hypot(z.real, z.imag); - #endif - } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow(__pyx_t_double_complex a, __pyx_t_double_complex b) { - __pyx_t_double_complex z; - double r, lnr, theta, z_r, z_theta; - if (b.imag == 0 && b.real == (int)b.real) { - if (b.real < 0) { - double denom = a.real * a.real + a.imag * a.imag; - a.real = a.real / denom; - a.imag = -a.imag / denom; - b.real = -b.real; - } - switch ((int)b.real) { - case 0: - z.real = 1; - z.imag = 0; - return z; - case 1: - return a; - case 2: - z = __Pyx_c_prod(a, a); - return __Pyx_c_prod(a, a); - case 3: - z = __Pyx_c_prod(a, a); - return __Pyx_c_prod(z, a); - case 4: - z = __Pyx_c_prod(a, a); - return __Pyx_c_prod(z, z); - } - } - if (a.imag == 0) { - if (a.real == 0) { - return a; - } - r = a.real; - theta = 0; - } else { - r = __Pyx_c_abs(a); - theta = atan2(a.imag, a.real); - } - lnr = log(r); - z_r = exp(lnr * b.real - theta * b.imag); - z_theta = theta * b.real + lnr * b.imag; - z.real = z_r * cos(z_theta); - z.imag = z_r * sin(z_theta); - return z; - } - #endif -#endif - -static int __Pyx_check_binary_version(void) { +/* CheckBinaryVersion */ + static int __Pyx_check_binary_version(void) { char ctversion[4], rtversion[4]; PyOS_snprintf(ctversion, 4, "%d.%d", PY_MAJOR_VERSION, PY_MINOR_VERSION); PyOS_snprintf(rtversion, 4, "%s", Py_GetVersion()); @@ -27151,88 +36825,8 @@ static int __Pyx_check_binary_version(void) { return 0; } -#ifndef __PYX_HAVE_RT_ImportModule -#define __PYX_HAVE_RT_ImportModule -static PyObject *__Pyx_ImportModule(const char *name) { - PyObject *py_name = 0; - PyObject *py_module = 0; - py_name = __Pyx_PyIdentifier_FromString(name); - if (!py_name) - goto bad; - py_module = PyImport_Import(py_name); - Py_DECREF(py_name); - return py_module; -bad: - Py_XDECREF(py_name); - return 0; -} -#endif - -#ifndef __PYX_HAVE_RT_ImportType -#define __PYX_HAVE_RT_ImportType -static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name, - size_t size, int strict) -{ - PyObject *py_module = 0; - PyObject *result = 0; - PyObject *py_name = 0; - char warning[200]; - Py_ssize_t basicsize; -#ifdef Py_LIMITED_API - PyObject *py_basicsize; -#endif - py_module = __Pyx_ImportModule(module_name); - if (!py_module) - goto bad; - py_name = __Pyx_PyIdentifier_FromString(class_name); - if (!py_name) - goto bad; - result = PyObject_GetAttr(py_module, py_name); - Py_DECREF(py_name); - py_name = 0; - Py_DECREF(py_module); - py_module = 0; - if (!result) - goto bad; - if (!PyType_Check(result)) { - PyErr_Format(PyExc_TypeError, - "%.200s.%.200s is not a type object", - module_name, class_name); - goto bad; - } -#ifndef Py_LIMITED_API - basicsize = ((PyTypeObject *)result)->tp_basicsize; -#else - py_basicsize = PyObject_GetAttrString(result, "__basicsize__"); - if (!py_basicsize) - goto bad; - basicsize = PyLong_AsSsize_t(py_basicsize); - Py_DECREF(py_basicsize); - py_basicsize = 0; - if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred()) - goto bad; -#endif - if (!strict && (size_t)basicsize > size) { - PyOS_snprintf(warning, sizeof(warning), - "%s.%s size changed, may indicate binary incompatibility", - module_name, class_name); - if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad; - } - else if ((size_t)basicsize != size) { - PyErr_Format(PyExc_ValueError, - "%.200s.%.200s has the wrong size, try recompiling", - module_name, class_name); - goto bad; - } - return (PyTypeObject *)result; -bad: - Py_XDECREF(py_module); - Py_XDECREF(result); - return NULL; -} -#endif - -static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) { +/* InitStrings */ + static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) { while (t->p) { #if PY_MAJOR_VERSION < 3 if (t->is_unicode) { @@ -27257,6 +36851,8 @@ static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) { #endif if (!*t->p) return -1; + if (PyObject_Hash(*t->p) == -1) + return -1; ++t; } return 0; @@ -27265,53 +36861,60 @@ static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) { static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(const char* c_str) { return __Pyx_PyUnicode_FromStringAndSize(c_str, (Py_ssize_t)strlen(c_str)); } -static CYTHON_INLINE char* __Pyx_PyObject_AsString(PyObject* o) { +static CYTHON_INLINE const char* __Pyx_PyObject_AsString(PyObject* o) { Py_ssize_t ignore; return __Pyx_PyObject_AsStringAndSize(o, &ignore); } -static CYTHON_INLINE char* __Pyx_PyObject_AsStringAndSize(PyObject* o, Py_ssize_t *length) { +#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII || __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT +#if !CYTHON_PEP393_ENABLED +static const char* __Pyx_PyUnicode_AsStringAndSize(PyObject* o, Py_ssize_t *length) { + char* defenc_c; + PyObject* defenc = _PyUnicode_AsDefaultEncodedString(o, NULL); + if (!defenc) return NULL; + defenc_c = PyBytes_AS_STRING(defenc); +#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII + { + char* end = defenc_c + PyBytes_GET_SIZE(defenc); + char* c; + for (c = defenc_c; c < end; c++) { + if ((unsigned char) (*c) >= 128) { + PyUnicode_AsASCIIString(o); + return NULL; + } + } + } +#endif + *length = PyBytes_GET_SIZE(defenc); + return defenc_c; +} +#else +static CYTHON_INLINE const char* __Pyx_PyUnicode_AsStringAndSize(PyObject* o, Py_ssize_t *length) { + if (unlikely(__Pyx_PyUnicode_READY(o) == -1)) return NULL; +#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII + if (likely(PyUnicode_IS_ASCII(o))) { + *length = PyUnicode_GET_LENGTH(o); + return PyUnicode_AsUTF8(o); + } else { + PyUnicode_AsASCIIString(o); + return NULL; + } +#else + return PyUnicode_AsUTF8AndSize(o, length); +#endif +} +#endif +#endif +static CYTHON_INLINE const char* __Pyx_PyObject_AsStringAndSize(PyObject* o, Py_ssize_t *length) { #if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII || __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT if ( #if PY_MAJOR_VERSION < 3 && __PYX_DEFAULT_STRING_ENCODING_IS_ASCII __Pyx_sys_getdefaultencoding_not_ascii && #endif PyUnicode_Check(o)) { -#if PY_VERSION_HEX < 0x03030000 - char* defenc_c; - PyObject* defenc = _PyUnicode_AsDefaultEncodedString(o, NULL); - if (!defenc) return NULL; - defenc_c = PyBytes_AS_STRING(defenc); -#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII - { - char* end = defenc_c + PyBytes_GET_SIZE(defenc); - char* c; - for (c = defenc_c; c < end; c++) { - if ((unsigned char) (*c) >= 128) { - PyUnicode_AsASCIIString(o); - return NULL; - } - } - } -#endif - *length = PyBytes_GET_SIZE(defenc); - return defenc_c; -#else - if (__Pyx_PyUnicode_READY(o) == -1) return NULL; -#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII - if (PyUnicode_IS_ASCII(o)) { - *length = PyUnicode_GET_LENGTH(o); - return PyUnicode_AsUTF8(o); - } else { - PyUnicode_AsASCIIString(o); - return NULL; - } -#else - return PyUnicode_AsUTF8AndSize(o, length); -#endif -#endif + return __Pyx_PyUnicode_AsStringAndSize(o, length); } else #endif -#if !CYTHON_COMPILING_IN_PYPY +#if (!CYTHON_COMPILING_IN_PYPY) || (defined(PyByteArray_AS_STRING) && defined(PyByteArray_GET_SIZE)) if (PyByteArray_Check(o)) { *length = PyByteArray_GET_SIZE(o); return PyByteArray_AS_STRING(o); @@ -27332,43 +36935,74 @@ static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) { if (is_true | (x == Py_False) | (x == Py_None)) return is_true; else return PyObject_IsTrue(x); } -static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x) { +static CYTHON_INLINE int __Pyx_PyObject_IsTrueAndDecref(PyObject* x) { + int retval; + if (unlikely(!x)) return -1; + retval = __Pyx_PyObject_IsTrue(x); + Py_DECREF(x); + return retval; +} +static PyObject* __Pyx_PyNumber_IntOrLongWrongResultType(PyObject* result, const char* type_name) { +#if PY_MAJOR_VERSION >= 3 + if (PyLong_Check(result)) { + if (PyErr_WarnFormat(PyExc_DeprecationWarning, 1, + "__int__ returned non-int (type %.200s). " + "The ability to return an instance of a strict subclass of int " + "is deprecated, and may be removed in a future version of Python.", + Py_TYPE(result)->tp_name)) { + Py_DECREF(result); + return NULL; + } + return result; + } +#endif + PyErr_Format(PyExc_TypeError, + "__%.4s__ returned non-%.4s (type %.200s)", + type_name, type_name, Py_TYPE(result)->tp_name); + Py_DECREF(result); + return NULL; +} +static CYTHON_INLINE PyObject* __Pyx_PyNumber_IntOrLong(PyObject* x) { +#if CYTHON_USE_TYPE_SLOTS PyNumberMethods *m; +#endif const char *name = NULL; PyObject *res = NULL; #if PY_MAJOR_VERSION < 3 - if (PyInt_Check(x) || PyLong_Check(x)) + if (likely(PyInt_Check(x) || PyLong_Check(x))) #else - if (PyLong_Check(x)) + if (likely(PyLong_Check(x))) #endif - return Py_INCREF(x), x; + return __Pyx_NewRef(x); +#if CYTHON_USE_TYPE_SLOTS m = Py_TYPE(x)->tp_as_number; -#if PY_MAJOR_VERSION < 3 + #if PY_MAJOR_VERSION < 3 if (m && m->nb_int) { name = "int"; - res = PyNumber_Int(x); + res = m->nb_int(x); } else if (m && m->nb_long) { name = "long"; - res = PyNumber_Long(x); + res = m->nb_long(x); } -#else - if (m && m->nb_int) { + #else + if (likely(m && m->nb_int)) { name = "int"; - res = PyNumber_Long(x); + res = m->nb_int(x); + } + #endif +#else + if (!PyBytes_CheckExact(x) && !PyUnicode_CheckExact(x)) { + res = PyNumber_Int(x); } #endif - if (res) { + if (likely(res)) { #if PY_MAJOR_VERSION < 3 - if (!PyInt_Check(res) && !PyLong_Check(res)) { + if (unlikely(!PyInt_Check(res) && !PyLong_Check(res))) { #else - if (!PyLong_Check(res)) { + if (unlikely(!PyLong_CheckExact(res))) { #endif - PyErr_Format(PyExc_TypeError, - "__%.4s__ returned non-%.4s (type %.200s)", - name, name, Py_TYPE(res)->tp_name); - Py_DECREF(res); - return NULL; + return __Pyx_PyNumber_IntOrLongWrongResultType(res, name); } } else if (!PyErr_Occurred()) { @@ -27381,18 +37015,55 @@ static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) { Py_ssize_t ival; PyObject *x; #if PY_MAJOR_VERSION < 3 - if (likely(PyInt_CheckExact(b))) - return PyInt_AS_LONG(b); + if (likely(PyInt_CheckExact(b))) { + if (sizeof(Py_ssize_t) >= sizeof(long)) + return PyInt_AS_LONG(b); + else + return PyInt_AsSsize_t(b); + } #endif if (likely(PyLong_CheckExact(b))) { - #if CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3 - #if CYTHON_USE_PYLONG_INTERNALS - switch (Py_SIZE(b)) { - case -1: return -(sdigit)((PyLongObject*)b)->ob_digit[0]; - case 0: return 0; - case 1: return ((PyLongObject*)b)->ob_digit[0]; - } - #endif + #if CYTHON_USE_PYLONG_INTERNALS + const digit* digits = ((PyLongObject*)b)->ob_digit; + const Py_ssize_t size = Py_SIZE(b); + if (likely(__Pyx_sst_abs(size) <= 1)) { + ival = likely(size) ? digits[0] : 0; + if (size == -1) ival = -ival; + return ival; + } else { + switch (size) { + case 2: + if (8 * sizeof(Py_ssize_t) > 2 * PyLong_SHIFT) { + return (Py_ssize_t) (((((size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); + } + break; + case -2: + if (8 * sizeof(Py_ssize_t) > 2 * PyLong_SHIFT) { + return -(Py_ssize_t) (((((size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); + } + break; + case 3: + if (8 * sizeof(Py_ssize_t) > 3 * PyLong_SHIFT) { + return (Py_ssize_t) (((((((size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); + } + break; + case -3: + if (8 * sizeof(Py_ssize_t) > 3 * PyLong_SHIFT) { + return -(Py_ssize_t) (((((((size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); + } + break; + case 4: + if (8 * sizeof(Py_ssize_t) > 4 * PyLong_SHIFT) { + return (Py_ssize_t) (((((((((size_t)digits[3]) << PyLong_SHIFT) | (size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); + } + break; + case -4: + if (8 * sizeof(Py_ssize_t) > 4 * PyLong_SHIFT) { + return -(Py_ssize_t) (((((((((size_t)digits[3]) << PyLong_SHIFT) | (size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); + } + break; + } + } #endif return PyLong_AsSsize_t(b); } @@ -27402,6 +37073,9 @@ static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) { Py_DECREF(x); return ival; } +static CYTHON_INLINE PyObject * __Pyx_PyBool_FromLong(long b) { + return b ? __Pyx_NewRef(Py_True) : __Pyx_NewRef(Py_False); +} static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) { return PyInt_FromSize_t(ival); } diff --git a/GPy/models/state_space_cython.pyx b/GPy/models/state_space_cython.pyx index ddfce6f0..1eacb684 100644 --- a/GPy/models/state_space_cython.pyx +++ b/GPy/models/state_space_cython.pyx @@ -493,7 +493,7 @@ cdef class AQcompute_batch_Cython(Q_handling_Cython): U,S,Vh = self.Q_svd_dict[matrix_index] square_root = U * np.sqrt(S) - self.Q_suqare_root_dict[matrix_index] = square_root + self.Q_square_root_dict[matrix_index] = square_root return square_root diff --git a/GPy/util/choleskies_cython.c b/GPy/util/choleskies_cython.c index 11afafab..eb23de8b 100644 --- a/GPy/util/choleskies_cython.c +++ b/GPy/util/choleskies_cython.c @@ -1,28 +1,18 @@ -/* Generated by Cython 0.21 */ +/* Generated by Cython 0.29.2 */ #define PY_SSIZE_T_CLEAN -#ifndef CYTHON_USE_PYLONG_INTERNALS -#ifdef PYLONG_BITS_IN_DIGIT -#define CYTHON_USE_PYLONG_INTERNALS 0 -#else -#include "pyconfig.h" -#ifdef PYLONG_BITS_IN_DIGIT -#define CYTHON_USE_PYLONG_INTERNALS 1 -#else -#define CYTHON_USE_PYLONG_INTERNALS 0 -#endif -#endif -#endif #include "Python.h" #ifndef Py_PYTHON_H #error Python headers needed to compile C extensions, please install development version of Python. -#elif PY_VERSION_HEX < 0x02060000 || (0x03000000 <= PY_VERSION_HEX && PY_VERSION_HEX < 0x03020000) - #error Cython requires Python 2.6+ or Python 3.2+. +#elif PY_VERSION_HEX < 0x02060000 || (0x03000000 <= PY_VERSION_HEX && PY_VERSION_HEX < 0x03030000) + #error Cython requires Python 2.6+ or Python 3.3+. #else -#define CYTHON_ABI "0_21" +#define CYTHON_ABI "0_29_2" +#define CYTHON_HEX_VERSION 0x001D02F0 +#define CYTHON_FUTURE_DIVISION 0 #include #ifndef offsetof -#define offsetof(type, member) ( (size_t) & ((type*)0) -> member ) + #define offsetof(type, member) ( (size_t) & ((type*)0) -> member ) #endif #if !defined(WIN32) && !defined(MS_WINDOWS) #ifndef __stdcall @@ -41,6 +31,12 @@ #ifndef DL_EXPORT #define DL_EXPORT(t) t #endif +#define __PYX_COMMA , +#ifndef HAVE_LONG_LONG + #if PY_VERSION_HEX >= 0x02070000 + #define HAVE_LONG_LONG + #endif +#endif #ifndef PY_LONG_LONG #define PY_LONG_LONG LONG_LONG #endif @@ -48,77 +44,462 @@ #define Py_HUGE_VAL HUGE_VAL #endif #ifdef PYPY_VERSION -#define CYTHON_COMPILING_IN_PYPY 1 -#define CYTHON_COMPILING_IN_CPYTHON 0 + #define CYTHON_COMPILING_IN_PYPY 1 + #define CYTHON_COMPILING_IN_PYSTON 0 + #define CYTHON_COMPILING_IN_CPYTHON 0 + #undef CYTHON_USE_TYPE_SLOTS + #define CYTHON_USE_TYPE_SLOTS 0 + #undef CYTHON_USE_PYTYPE_LOOKUP + #define CYTHON_USE_PYTYPE_LOOKUP 0 + #if PY_VERSION_HEX < 0x03050000 + #undef CYTHON_USE_ASYNC_SLOTS + #define CYTHON_USE_ASYNC_SLOTS 0 + #elif !defined(CYTHON_USE_ASYNC_SLOTS) + #define CYTHON_USE_ASYNC_SLOTS 1 + #endif + #undef CYTHON_USE_PYLIST_INTERNALS + #define CYTHON_USE_PYLIST_INTERNALS 0 + #undef CYTHON_USE_UNICODE_INTERNALS + #define CYTHON_USE_UNICODE_INTERNALS 0 + #undef CYTHON_USE_UNICODE_WRITER + #define CYTHON_USE_UNICODE_WRITER 0 + #undef CYTHON_USE_PYLONG_INTERNALS + #define CYTHON_USE_PYLONG_INTERNALS 0 + #undef CYTHON_AVOID_BORROWED_REFS + #define CYTHON_AVOID_BORROWED_REFS 1 + #undef CYTHON_ASSUME_SAFE_MACROS + #define CYTHON_ASSUME_SAFE_MACROS 0 + #undef CYTHON_UNPACK_METHODS + #define CYTHON_UNPACK_METHODS 0 + #undef CYTHON_FAST_THREAD_STATE + #define CYTHON_FAST_THREAD_STATE 0 + #undef CYTHON_FAST_PYCALL + #define CYTHON_FAST_PYCALL 0 + #undef CYTHON_PEP489_MULTI_PHASE_INIT + #define CYTHON_PEP489_MULTI_PHASE_INIT 0 + #undef CYTHON_USE_TP_FINALIZE + #define CYTHON_USE_TP_FINALIZE 0 + #undef CYTHON_USE_DICT_VERSIONS + #define CYTHON_USE_DICT_VERSIONS 0 + #undef CYTHON_USE_EXC_INFO_STACK + #define CYTHON_USE_EXC_INFO_STACK 0 +#elif defined(PYSTON_VERSION) + #define CYTHON_COMPILING_IN_PYPY 0 + #define CYTHON_COMPILING_IN_PYSTON 1 + #define CYTHON_COMPILING_IN_CPYTHON 0 + #ifndef CYTHON_USE_TYPE_SLOTS + #define CYTHON_USE_TYPE_SLOTS 1 + #endif + #undef CYTHON_USE_PYTYPE_LOOKUP + #define CYTHON_USE_PYTYPE_LOOKUP 0 + #undef CYTHON_USE_ASYNC_SLOTS + #define CYTHON_USE_ASYNC_SLOTS 0 + #undef CYTHON_USE_PYLIST_INTERNALS + #define CYTHON_USE_PYLIST_INTERNALS 0 + #ifndef CYTHON_USE_UNICODE_INTERNALS + #define CYTHON_USE_UNICODE_INTERNALS 1 + #endif + #undef CYTHON_USE_UNICODE_WRITER + #define CYTHON_USE_UNICODE_WRITER 0 + #undef CYTHON_USE_PYLONG_INTERNALS + #define CYTHON_USE_PYLONG_INTERNALS 0 + #ifndef CYTHON_AVOID_BORROWED_REFS + #define CYTHON_AVOID_BORROWED_REFS 0 + #endif + #ifndef CYTHON_ASSUME_SAFE_MACROS + #define CYTHON_ASSUME_SAFE_MACROS 1 + #endif + #ifndef CYTHON_UNPACK_METHODS + #define CYTHON_UNPACK_METHODS 1 + #endif + #undef CYTHON_FAST_THREAD_STATE + #define CYTHON_FAST_THREAD_STATE 0 + #undef CYTHON_FAST_PYCALL + #define CYTHON_FAST_PYCALL 0 + #undef CYTHON_PEP489_MULTI_PHASE_INIT + #define CYTHON_PEP489_MULTI_PHASE_INIT 0 + #undef CYTHON_USE_TP_FINALIZE + #define CYTHON_USE_TP_FINALIZE 0 + #undef CYTHON_USE_DICT_VERSIONS + #define CYTHON_USE_DICT_VERSIONS 0 + #undef CYTHON_USE_EXC_INFO_STACK + #define CYTHON_USE_EXC_INFO_STACK 0 #else -#define CYTHON_COMPILING_IN_PYPY 0 -#define CYTHON_COMPILING_IN_CPYTHON 1 + #define CYTHON_COMPILING_IN_PYPY 0 + #define CYTHON_COMPILING_IN_PYSTON 0 + #define CYTHON_COMPILING_IN_CPYTHON 1 + #ifndef CYTHON_USE_TYPE_SLOTS + #define CYTHON_USE_TYPE_SLOTS 1 + #endif + #if PY_VERSION_HEX < 0x02070000 + #undef CYTHON_USE_PYTYPE_LOOKUP + #define CYTHON_USE_PYTYPE_LOOKUP 0 + #elif !defined(CYTHON_USE_PYTYPE_LOOKUP) + #define CYTHON_USE_PYTYPE_LOOKUP 1 + #endif + #if PY_MAJOR_VERSION < 3 + #undef CYTHON_USE_ASYNC_SLOTS + #define CYTHON_USE_ASYNC_SLOTS 0 + #elif !defined(CYTHON_USE_ASYNC_SLOTS) + #define CYTHON_USE_ASYNC_SLOTS 1 + #endif + #if PY_VERSION_HEX < 0x02070000 + #undef CYTHON_USE_PYLONG_INTERNALS + #define CYTHON_USE_PYLONG_INTERNALS 0 + #elif !defined(CYTHON_USE_PYLONG_INTERNALS) + #define CYTHON_USE_PYLONG_INTERNALS 1 + #endif + #ifndef CYTHON_USE_PYLIST_INTERNALS + #define CYTHON_USE_PYLIST_INTERNALS 1 + #endif + #ifndef CYTHON_USE_UNICODE_INTERNALS + #define CYTHON_USE_UNICODE_INTERNALS 1 + #endif + #if PY_VERSION_HEX < 0x030300F0 + #undef CYTHON_USE_UNICODE_WRITER + #define CYTHON_USE_UNICODE_WRITER 0 + #elif !defined(CYTHON_USE_UNICODE_WRITER) + #define CYTHON_USE_UNICODE_WRITER 1 + #endif + #ifndef CYTHON_AVOID_BORROWED_REFS + #define CYTHON_AVOID_BORROWED_REFS 0 + #endif + #ifndef CYTHON_ASSUME_SAFE_MACROS + #define CYTHON_ASSUME_SAFE_MACROS 1 + #endif + #ifndef CYTHON_UNPACK_METHODS + #define CYTHON_UNPACK_METHODS 1 + #endif + #ifndef CYTHON_FAST_THREAD_STATE + #define CYTHON_FAST_THREAD_STATE 1 + #endif + #ifndef CYTHON_FAST_PYCALL + #define CYTHON_FAST_PYCALL 1 + #endif + #ifndef CYTHON_PEP489_MULTI_PHASE_INIT + #define CYTHON_PEP489_MULTI_PHASE_INIT (PY_VERSION_HEX >= 0x03050000) + #endif + #ifndef CYTHON_USE_TP_FINALIZE + #define CYTHON_USE_TP_FINALIZE (PY_VERSION_HEX >= 0x030400a1) + #endif + #ifndef CYTHON_USE_DICT_VERSIONS + #define CYTHON_USE_DICT_VERSIONS (PY_VERSION_HEX >= 0x030600B1) + #endif + #ifndef CYTHON_USE_EXC_INFO_STACK + #define CYTHON_USE_EXC_INFO_STACK (PY_VERSION_HEX >= 0x030700A3) + #endif #endif -#if CYTHON_COMPILING_IN_PYPY && PY_VERSION_HEX < 0x02070600 -#define Py_OptimizeFlag 0 +#if !defined(CYTHON_FAST_PYCCALL) +#define CYTHON_FAST_PYCCALL (CYTHON_FAST_PYCALL && PY_VERSION_HEX >= 0x030600B1) +#endif +#if CYTHON_USE_PYLONG_INTERNALS + #include "longintrepr.h" + #undef SHIFT + #undef BASE + #undef MASK + #ifdef SIZEOF_VOID_P + enum { __pyx_check_sizeof_voidp = 1 / (int)(SIZEOF_VOID_P == sizeof(void*)) }; + #endif +#endif +#ifndef __has_attribute + #define __has_attribute(x) 0 +#endif +#ifndef __has_cpp_attribute + #define __has_cpp_attribute(x) 0 +#endif +#ifndef CYTHON_RESTRICT + #if defined(__GNUC__) + #define CYTHON_RESTRICT __restrict__ + #elif defined(_MSC_VER) && _MSC_VER >= 1400 + #define CYTHON_RESTRICT __restrict + #elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L + #define CYTHON_RESTRICT restrict + #else + #define CYTHON_RESTRICT + #endif +#endif +#ifndef CYTHON_UNUSED +# if defined(__GNUC__) +# if !(defined(__cplusplus)) || (__GNUC__ > 3 || (__GNUC__ == 3 && __GNUC_MINOR__ >= 4)) +# define CYTHON_UNUSED __attribute__ ((__unused__)) +# else +# define CYTHON_UNUSED +# endif +# elif defined(__ICC) || (defined(__INTEL_COMPILER) && !defined(_MSC_VER)) +# define CYTHON_UNUSED __attribute__ ((__unused__)) +# else +# define CYTHON_UNUSED +# endif +#endif +#ifndef CYTHON_MAYBE_UNUSED_VAR +# if defined(__cplusplus) + template void CYTHON_MAYBE_UNUSED_VAR( const T& ) { } +# else +# define CYTHON_MAYBE_UNUSED_VAR(x) (void)(x) +# endif +#endif +#ifndef CYTHON_NCP_UNUSED +# if CYTHON_COMPILING_IN_CPYTHON +# define CYTHON_NCP_UNUSED +# else +# define CYTHON_NCP_UNUSED CYTHON_UNUSED +# endif +#endif +#define __Pyx_void_to_None(void_result) ((void)(void_result), Py_INCREF(Py_None), Py_None) +#ifdef _MSC_VER + #ifndef _MSC_STDINT_H_ + #if _MSC_VER < 1300 + typedef unsigned char uint8_t; + typedef unsigned int uint32_t; + #else + typedef unsigned __int8 uint8_t; + typedef unsigned __int32 uint32_t; + #endif + #endif +#else + #include +#endif +#ifndef CYTHON_FALLTHROUGH + #if defined(__cplusplus) && __cplusplus >= 201103L + #if __has_cpp_attribute(fallthrough) + #define CYTHON_FALLTHROUGH [[fallthrough]] + #elif __has_cpp_attribute(clang::fallthrough) + #define CYTHON_FALLTHROUGH [[clang::fallthrough]] + #elif __has_cpp_attribute(gnu::fallthrough) + #define CYTHON_FALLTHROUGH [[gnu::fallthrough]] + #endif + #endif + #ifndef CYTHON_FALLTHROUGH + #if __has_attribute(fallthrough) + #define CYTHON_FALLTHROUGH __attribute__((fallthrough)) + #else + #define CYTHON_FALLTHROUGH + #endif + #endif + #if defined(__clang__ ) && defined(__apple_build_version__) + #if __apple_build_version__ < 7000000 + #undef CYTHON_FALLTHROUGH + #define CYTHON_FALLTHROUGH + #endif + #endif +#endif + +#ifndef CYTHON_INLINE + #if defined(__clang__) + #define CYTHON_INLINE __inline__ __attribute__ ((__unused__)) + #elif defined(__GNUC__) + #define CYTHON_INLINE __inline__ + #elif defined(_MSC_VER) + #define CYTHON_INLINE __inline + #elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L + #define CYTHON_INLINE inline + #else + #define CYTHON_INLINE + #endif +#endif + +#if CYTHON_COMPILING_IN_PYPY && PY_VERSION_HEX < 0x02070600 && !defined(Py_OptimizeFlag) + #define Py_OptimizeFlag 0 #endif #define __PYX_BUILD_PY_SSIZE_T "n" #define CYTHON_FORMAT_SSIZE_T "z" #if PY_MAJOR_VERSION < 3 #define __Pyx_BUILTIN_MODULE_NAME "__builtin__" - #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) \ + #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)\ PyCode_New(a+k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) #define __Pyx_DefaultClassType PyClass_Type #else #define __Pyx_BUILTIN_MODULE_NAME "builtins" - #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) \ + #define __Pyx_PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos)\ PyCode_New(a, k, l, s, f, code, c, n, v, fv, cell, fn, name, fline, lnos) #define __Pyx_DefaultClassType PyType_Type #endif -#if PY_MAJOR_VERSION >= 3 +#ifndef Py_TPFLAGS_CHECKTYPES #define Py_TPFLAGS_CHECKTYPES 0 +#endif +#ifndef Py_TPFLAGS_HAVE_INDEX #define Py_TPFLAGS_HAVE_INDEX 0 #endif -#if PY_MAJOR_VERSION >= 3 +#ifndef Py_TPFLAGS_HAVE_NEWBUFFER #define Py_TPFLAGS_HAVE_NEWBUFFER 0 #endif -#if PY_VERSION_HEX < 0x030400a1 && !defined(Py_TPFLAGS_HAVE_FINALIZE) +#ifndef Py_TPFLAGS_HAVE_FINALIZE #define Py_TPFLAGS_HAVE_FINALIZE 0 #endif +#ifndef METH_STACKLESS + #define METH_STACKLESS 0 +#endif +#if PY_VERSION_HEX <= 0x030700A3 || !defined(METH_FASTCALL) + #ifndef METH_FASTCALL + #define METH_FASTCALL 0x80 + #endif + typedef PyObject *(*__Pyx_PyCFunctionFast) (PyObject *self, PyObject *const *args, Py_ssize_t nargs); + typedef PyObject *(*__Pyx_PyCFunctionFastWithKeywords) (PyObject *self, PyObject *const *args, + Py_ssize_t nargs, PyObject *kwnames); +#else + #define __Pyx_PyCFunctionFast _PyCFunctionFast + #define __Pyx_PyCFunctionFastWithKeywords _PyCFunctionFastWithKeywords +#endif +#if CYTHON_FAST_PYCCALL +#define __Pyx_PyFastCFunction_Check(func)\ + ((PyCFunction_Check(func) && (METH_FASTCALL == (PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST | METH_KEYWORDS | METH_STACKLESS))))) +#else +#define __Pyx_PyFastCFunction_Check(func) 0 +#endif +#if CYTHON_USE_DICT_VERSIONS +#define __PYX_GET_DICT_VERSION(dict) (((PyDictObject*)(dict))->ma_version_tag) +#define __PYX_UPDATE_DICT_CACHE(dict, value, cache_var, version_var)\ + (version_var) = __PYX_GET_DICT_VERSION(dict);\ + (cache_var) = (value); +#define __PYX_PY_DICT_LOOKUP_IF_MODIFIED(VAR, DICT, LOOKUP) {\ + static PY_UINT64_T __pyx_dict_version = 0;\ + static PyObject *__pyx_dict_cached_value = NULL;\ + if (likely(__PYX_GET_DICT_VERSION(DICT) == __pyx_dict_version)) {\ + (VAR) = __pyx_dict_cached_value;\ + } else {\ + (VAR) = __pyx_dict_cached_value = (LOOKUP);\ + __pyx_dict_version = __PYX_GET_DICT_VERSION(DICT);\ + }\ + } +#else +#define __PYX_GET_DICT_VERSION(dict) (0) +#define __PYX_UPDATE_DICT_CACHE(dict, value, cache_var, version_var) +#define __PYX_PY_DICT_LOOKUP_IF_MODIFIED(VAR, DICT, LOOKUP) (VAR) = (LOOKUP); +#endif +#if CYTHON_COMPILING_IN_PYPY && !defined(PyObject_Malloc) + #define PyObject_Malloc(s) PyMem_Malloc(s) + #define PyObject_Free(p) PyMem_Free(p) + #define PyObject_Realloc(p) PyMem_Realloc(p) +#endif +#if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX < 0x030400A1 + #define PyMem_RawMalloc(n) PyMem_Malloc(n) + #define PyMem_RawRealloc(p, n) PyMem_Realloc(p, n) + #define PyMem_RawFree(p) PyMem_Free(p) +#endif +#if CYTHON_COMPILING_IN_PYSTON + #define __Pyx_PyCode_HasFreeVars(co) PyCode_HasFreeVars(co) + #define __Pyx_PyFrame_SetLineNumber(frame, lineno) PyFrame_SetLineNumber(frame, lineno) +#else + #define __Pyx_PyCode_HasFreeVars(co) (PyCode_GetNumFree(co) > 0) + #define __Pyx_PyFrame_SetLineNumber(frame, lineno) (frame)->f_lineno = (lineno) +#endif +#if !CYTHON_FAST_THREAD_STATE || PY_VERSION_HEX < 0x02070000 + #define __Pyx_PyThreadState_Current PyThreadState_GET() +#elif PY_VERSION_HEX >= 0x03060000 + #define __Pyx_PyThreadState_Current _PyThreadState_UncheckedGet() +#elif PY_VERSION_HEX >= 0x03000000 + #define __Pyx_PyThreadState_Current PyThreadState_GET() +#else + #define __Pyx_PyThreadState_Current _PyThreadState_Current +#endif +#if PY_VERSION_HEX < 0x030700A2 && !defined(PyThread_tss_create) && !defined(Py_tss_NEEDS_INIT) +#include "pythread.h" +#define Py_tss_NEEDS_INIT 0 +typedef int Py_tss_t; +static CYTHON_INLINE int PyThread_tss_create(Py_tss_t *key) { + *key = PyThread_create_key(); + return 0; // PyThread_create_key reports success always +} +static CYTHON_INLINE Py_tss_t * PyThread_tss_alloc(void) { + Py_tss_t *key = (Py_tss_t *)PyObject_Malloc(sizeof(Py_tss_t)); + *key = Py_tss_NEEDS_INIT; + return key; +} +static CYTHON_INLINE void PyThread_tss_free(Py_tss_t *key) { + PyObject_Free(key); +} +static CYTHON_INLINE int PyThread_tss_is_created(Py_tss_t *key) { + return *key != Py_tss_NEEDS_INIT; +} +static CYTHON_INLINE void PyThread_tss_delete(Py_tss_t *key) { + PyThread_delete_key(*key); + *key = Py_tss_NEEDS_INIT; +} +static CYTHON_INLINE int PyThread_tss_set(Py_tss_t *key, void *value) { + return PyThread_set_key_value(*key, value); +} +static CYTHON_INLINE void * PyThread_tss_get(Py_tss_t *key) { + return PyThread_get_key_value(*key); +} +#endif // TSS (Thread Specific Storage) API +#if CYTHON_COMPILING_IN_CPYTHON || defined(_PyDict_NewPresized) +#define __Pyx_PyDict_NewPresized(n) ((n <= 8) ? PyDict_New() : _PyDict_NewPresized(n)) +#else +#define __Pyx_PyDict_NewPresized(n) PyDict_New() +#endif +#if PY_MAJOR_VERSION >= 3 || CYTHON_FUTURE_DIVISION + #define __Pyx_PyNumber_Divide(x,y) PyNumber_TrueDivide(x,y) + #define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceTrueDivide(x,y) +#else + #define __Pyx_PyNumber_Divide(x,y) PyNumber_Divide(x,y) + #define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceDivide(x,y) +#endif +#if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX >= 0x030500A1 && CYTHON_USE_UNICODE_INTERNALS +#define __Pyx_PyDict_GetItemStr(dict, name) _PyDict_GetItem_KnownHash(dict, name, ((PyASCIIObject *) name)->hash) +#else +#define __Pyx_PyDict_GetItemStr(dict, name) PyDict_GetItem(dict, name) +#endif #if PY_VERSION_HEX > 0x03030000 && defined(PyUnicode_KIND) #define CYTHON_PEP393_ENABLED 1 - #define __Pyx_PyUnicode_READY(op) (likely(PyUnicode_IS_READY(op)) ? \ + #define __Pyx_PyUnicode_READY(op) (likely(PyUnicode_IS_READY(op)) ?\ 0 : _PyUnicode_Ready((PyObject *)(op))) #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_LENGTH(u) #define __Pyx_PyUnicode_READ_CHAR(u, i) PyUnicode_READ_CHAR(u, i) + #define __Pyx_PyUnicode_MAX_CHAR_VALUE(u) PyUnicode_MAX_CHAR_VALUE(u) #define __Pyx_PyUnicode_KIND(u) PyUnicode_KIND(u) #define __Pyx_PyUnicode_DATA(u) PyUnicode_DATA(u) #define __Pyx_PyUnicode_READ(k, d, i) PyUnicode_READ(k, d, i) + #define __Pyx_PyUnicode_WRITE(k, d, i, ch) PyUnicode_WRITE(k, d, i, ch) + #define __Pyx_PyUnicode_IS_TRUE(u) (0 != (likely(PyUnicode_IS_READY(u)) ? PyUnicode_GET_LENGTH(u) : PyUnicode_GET_SIZE(u))) #else #define CYTHON_PEP393_ENABLED 0 + #define PyUnicode_1BYTE_KIND 1 + #define PyUnicode_2BYTE_KIND 2 + #define PyUnicode_4BYTE_KIND 4 #define __Pyx_PyUnicode_READY(op) (0) #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_SIZE(u) #define __Pyx_PyUnicode_READ_CHAR(u, i) ((Py_UCS4)(PyUnicode_AS_UNICODE(u)[i])) + #define __Pyx_PyUnicode_MAX_CHAR_VALUE(u) ((sizeof(Py_UNICODE) == 2) ? 65535 : 1114111) #define __Pyx_PyUnicode_KIND(u) (sizeof(Py_UNICODE)) #define __Pyx_PyUnicode_DATA(u) ((void*)PyUnicode_AS_UNICODE(u)) #define __Pyx_PyUnicode_READ(k, d, i) ((void)(k), (Py_UCS4)(((Py_UNICODE*)d)[i])) + #define __Pyx_PyUnicode_WRITE(k, d, i, ch) (((void)(k)), ((Py_UNICODE*)d)[i] = ch) + #define __Pyx_PyUnicode_IS_TRUE(u) (0 != PyUnicode_GET_SIZE(u)) #endif #if CYTHON_COMPILING_IN_PYPY #define __Pyx_PyUnicode_Concat(a, b) PyNumber_Add(a, b) #define __Pyx_PyUnicode_ConcatSafe(a, b) PyNumber_Add(a, b) #else #define __Pyx_PyUnicode_Concat(a, b) PyUnicode_Concat(a, b) - #define __Pyx_PyUnicode_ConcatSafe(a, b) ((unlikely((a) == Py_None) || unlikely((b) == Py_None)) ? \ + #define __Pyx_PyUnicode_ConcatSafe(a, b) ((unlikely((a) == Py_None) || unlikely((b) == Py_None)) ?\ PyNumber_Add(a, b) : __Pyx_PyUnicode_Concat(a, b)) #endif -#define __Pyx_PyString_FormatSafe(a, b) ((unlikely((a) == Py_None)) ? PyNumber_Remainder(a, b) : __Pyx_PyString_Format(a, b)) -#define __Pyx_PyUnicode_FormatSafe(a, b) ((unlikely((a) == Py_None)) ? PyNumber_Remainder(a, b) : PyUnicode_Format(a, b)) +#if CYTHON_COMPILING_IN_PYPY && !defined(PyUnicode_Contains) + #define PyUnicode_Contains(u, s) PySequence_Contains(u, s) +#endif +#if CYTHON_COMPILING_IN_PYPY && !defined(PyByteArray_Check) + #define PyByteArray_Check(obj) PyObject_TypeCheck(obj, &PyByteArray_Type) +#endif +#if CYTHON_COMPILING_IN_PYPY && !defined(PyObject_Format) + #define PyObject_Format(obj, fmt) PyObject_CallMethod(obj, "__format__", "O", fmt) +#endif +#define __Pyx_PyString_FormatSafe(a, b) ((unlikely((a) == Py_None || (PyString_Check(b) && !PyString_CheckExact(b)))) ? PyNumber_Remainder(a, b) : __Pyx_PyString_Format(a, b)) +#define __Pyx_PyUnicode_FormatSafe(a, b) ((unlikely((a) == Py_None || (PyUnicode_Check(b) && !PyUnicode_CheckExact(b)))) ? PyNumber_Remainder(a, b) : PyUnicode_Format(a, b)) #if PY_MAJOR_VERSION >= 3 #define __Pyx_PyString_Format(a, b) PyUnicode_Format(a, b) #else #define __Pyx_PyString_Format(a, b) PyString_Format(a, b) #endif +#if PY_MAJOR_VERSION < 3 && !defined(PyObject_ASCII) + #define PyObject_ASCII(o) PyObject_Repr(o) +#endif #if PY_MAJOR_VERSION >= 3 #define PyBaseString_Type PyUnicode_Type #define PyStringObject PyUnicodeObject #define PyString_Type PyUnicode_Type #define PyString_Check PyUnicode_Check #define PyString_CheckExact PyUnicode_CheckExact + #define PyObject_Unicode PyObject_Str #endif #if PY_MAJOR_VERSION >= 3 #define __Pyx_PyBaseString_Check(obj) PyUnicode_Check(obj) @@ -130,7 +511,11 @@ #ifndef PySet_CheckExact #define PySet_CheckExact(obj) (Py_TYPE(obj) == &PySet_Type) #endif -#define __Pyx_TypeCheck(obj, type) PyObject_TypeCheck(obj, (PyTypeObject *)type) +#if CYTHON_ASSUME_SAFE_MACROS + #define __Pyx_PySequence_SIZE(seq) Py_SIZE(seq) +#else + #define __Pyx_PySequence_SIZE(seq) PySequence_Size(seq) +#endif #if PY_MAJOR_VERSION >= 3 #define PyIntObject PyLongObject #define PyInt_Type PyLong_Type @@ -151,6 +536,11 @@ #if PY_MAJOR_VERSION >= 3 #define PyBoolObject PyLongObject #endif +#if PY_MAJOR_VERSION >= 3 && CYTHON_COMPILING_IN_PYPY + #ifndef PyUnicode_InternFromString + #define PyUnicode_InternFromString(s) PyUnicode_FromString(s) + #endif +#endif #if PY_VERSION_HEX < 0x030200A4 typedef long Py_hash_t; #define __Pyx_PyInt_FromHash_t PyInt_FromLong @@ -160,58 +550,53 @@ #define __Pyx_PyInt_AsHash_t PyInt_AsSsize_t #endif #if PY_MAJOR_VERSION >= 3 - #define PyMethod_New(func, self, klass) ((self) ? PyMethod_New(func, self) : PyInstanceMethod_New(func)) + #define __Pyx_PyMethod_New(func, self, klass) ((self) ? PyMethod_New(func, self) : (Py_INCREF(func), func)) +#else + #define __Pyx_PyMethod_New(func, self, klass) PyMethod_New(func, self, klass) #endif -#ifndef CYTHON_INLINE - #if defined(__GNUC__) - #define CYTHON_INLINE __inline__ - #elif defined(_MSC_VER) - #define CYTHON_INLINE __inline - #elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L - #define CYTHON_INLINE inline +#if CYTHON_USE_ASYNC_SLOTS + #if PY_VERSION_HEX >= 0x030500B1 + #define __Pyx_PyAsyncMethodsStruct PyAsyncMethods + #define __Pyx_PyType_AsAsync(obj) (Py_TYPE(obj)->tp_as_async) #else - #define CYTHON_INLINE + #define __Pyx_PyType_AsAsync(obj) ((__Pyx_PyAsyncMethodsStruct*) (Py_TYPE(obj)->tp_reserved)) #endif +#else + #define __Pyx_PyType_AsAsync(obj) NULL #endif -#ifndef CYTHON_RESTRICT - #if defined(__GNUC__) - #define CYTHON_RESTRICT __restrict__ - #elif defined(_MSC_VER) && _MSC_VER >= 1400 - #define CYTHON_RESTRICT __restrict - #elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L - #define CYTHON_RESTRICT restrict - #else - #define CYTHON_RESTRICT - #endif +#ifndef __Pyx_PyAsyncMethodsStruct + typedef struct { + unaryfunc am_await; + unaryfunc am_aiter; + unaryfunc am_anext; + } __Pyx_PyAsyncMethodsStruct; #endif + +#if defined(WIN32) || defined(MS_WINDOWS) + #define _USE_MATH_DEFINES +#endif +#include #ifdef NAN #define __PYX_NAN() ((float) NAN) #else static CYTHON_INLINE float __PYX_NAN() { - /* Initialize NaN. The sign is irrelevant, an exponent with all bits 1 and - a nonzero mantissa means NaN. If the first bit in the mantissa is 1, it is - a quiet NaN. */ float value; memset(&value, 0xFF, sizeof(value)); return value; } #endif -#ifdef __cplusplus -template -void __Pyx_call_destructor(T* x) { - x->~T(); -} -#endif - - -#if PY_MAJOR_VERSION >= 3 - #define __Pyx_PyNumber_Divide(x,y) PyNumber_TrueDivide(x,y) - #define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceTrueDivide(x,y) +#if defined(__CYGWIN__) && defined(_LDBL_EQ_DBL) +#define __Pyx_truncl trunc #else - #define __Pyx_PyNumber_Divide(x,y) PyNumber_Divide(x,y) - #define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceDivide(x,y) +#define __Pyx_truncl truncl #endif + +#define __PYX_ERR(f_index, lineno, Ln_error) \ +{ \ + __pyx_filename = __pyx_f[f_index]; __pyx_lineno = lineno; __pyx_clineno = __LINE__; goto Ln_error; \ +} + #ifndef __PYX_EXTERN_C #ifdef __cplusplus #define __PYX_EXTERN_C extern "C" @@ -220,41 +605,25 @@ void __Pyx_call_destructor(T* x) { #endif #endif -#if defined(WIN32) || defined(MS_WINDOWS) -#define _USE_MATH_DEFINES -#endif -#include #define __PYX_HAVE__GPy__util__choleskies_cython #define __PYX_HAVE_API__GPy__util__choleskies_cython -#include "string.h" -#include "stdio.h" -#include "stdlib.h" +/* Early includes */ +#include +#include #include "numpy/arrayobject.h" #include "numpy/ufuncobject.h" #include "pythread.h" +#include #include "pystate.h" #ifdef _OPENMP #include #endif /* _OPENMP */ -#ifdef PYREX_WITHOUT_ASSERTIONS +#if defined(PYREX_WITHOUT_ASSERTIONS) && !defined(CYTHON_WITHOUT_ASSERTIONS) #define CYTHON_WITHOUT_ASSERTIONS #endif -#ifndef CYTHON_UNUSED -# if defined(__GNUC__) -# if !(defined(__cplusplus)) || (__GNUC__ > 3 || (__GNUC__ == 3 && __GNUC_MINOR__ >= 4)) -# define CYTHON_UNUSED __attribute__ ((__unused__)) -# else -# define CYTHON_UNUSED -# endif -# elif defined(__ICC) || (defined(__INTEL_COMPILER) && !defined(_MSC_VER)) -# define CYTHON_UNUSED __attribute__ ((__unused__)) -# else -# define CYTHON_UNUSED -# endif -#endif -typedef struct {PyObject **p; char *s; const Py_ssize_t n; const char* encoding; +typedef struct {PyObject **p; const char *s; const Py_ssize_t n; const char* encoding; const char is_unicode; const char is_str; const char intern; } __Pyx_StringTabEntry; #define __PYX_DEFAULT_STRING_ENCODING_IS_ASCII 0 @@ -262,18 +631,39 @@ typedef struct {PyObject **p; char *s; const Py_ssize_t n; const char* encoding; #define __PYX_DEFAULT_STRING_ENCODING "" #define __Pyx_PyObject_FromString __Pyx_PyBytes_FromString #define __Pyx_PyObject_FromStringAndSize __Pyx_PyBytes_FromStringAndSize -#define __Pyx_fits_Py_ssize_t(v, type, is_signed) ( \ - (sizeof(type) < sizeof(Py_ssize_t)) || \ - (sizeof(type) > sizeof(Py_ssize_t) && \ - likely(v < (type)PY_SSIZE_T_MAX || \ - v == (type)PY_SSIZE_T_MAX) && \ - (!is_signed || likely(v > (type)PY_SSIZE_T_MIN || \ - v == (type)PY_SSIZE_T_MIN))) || \ - (sizeof(type) == sizeof(Py_ssize_t) && \ - (is_signed || likely(v < (type)PY_SSIZE_T_MAX || \ +#define __Pyx_uchar_cast(c) ((unsigned char)c) +#define __Pyx_long_cast(x) ((long)x) +#define __Pyx_fits_Py_ssize_t(v, type, is_signed) (\ + (sizeof(type) < sizeof(Py_ssize_t)) ||\ + (sizeof(type) > sizeof(Py_ssize_t) &&\ + likely(v < (type)PY_SSIZE_T_MAX ||\ + v == (type)PY_SSIZE_T_MAX) &&\ + (!is_signed || likely(v > (type)PY_SSIZE_T_MIN ||\ + v == (type)PY_SSIZE_T_MIN))) ||\ + (sizeof(type) == sizeof(Py_ssize_t) &&\ + (is_signed || likely(v < (type)PY_SSIZE_T_MAX ||\ v == (type)PY_SSIZE_T_MAX))) ) -static CYTHON_INLINE char* __Pyx_PyObject_AsString(PyObject*); -static CYTHON_INLINE char* __Pyx_PyObject_AsStringAndSize(PyObject*, Py_ssize_t* length); +static CYTHON_INLINE int __Pyx_is_valid_index(Py_ssize_t i, Py_ssize_t limit) { + return (size_t) i < (size_t) limit; +} +#if defined (__cplusplus) && __cplusplus >= 201103L + #include + #define __Pyx_sst_abs(value) std::abs(value) +#elif SIZEOF_INT >= SIZEOF_SIZE_T + #define __Pyx_sst_abs(value) abs(value) +#elif SIZEOF_LONG >= SIZEOF_SIZE_T + #define __Pyx_sst_abs(value) labs(value) +#elif defined (_MSC_VER) + #define __Pyx_sst_abs(value) ((Py_ssize_t)_abs64(value)) +#elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L + #define __Pyx_sst_abs(value) llabs(value) +#elif defined (__GNUC__) + #define __Pyx_sst_abs(value) __builtin_llabs(value) +#else + #define __Pyx_sst_abs(value) ((value<0) ? -value : value) +#endif +static CYTHON_INLINE const char* __Pyx_PyObject_AsString(PyObject*); +static CYTHON_INLINE const char* __Pyx_PyObject_AsStringAndSize(PyObject*, Py_ssize_t* length); #define __Pyx_PyByteArray_FromString(s) PyByteArray_FromStringAndSize((const char*)s, strlen((const char*)s)) #define __Pyx_PyByteArray_FromStringAndSize(s, l) PyByteArray_FromStringAndSize((const char*)s, l) #define __Pyx_PyBytes_FromString PyBytes_FromString @@ -286,38 +676,52 @@ static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(const char*); #define __Pyx_PyStr_FromString __Pyx_PyUnicode_FromString #define __Pyx_PyStr_FromStringAndSize __Pyx_PyUnicode_FromStringAndSize #endif -#define __Pyx_PyObject_AsSString(s) ((signed char*) __Pyx_PyObject_AsString(s)) -#define __Pyx_PyObject_AsUString(s) ((unsigned char*) __Pyx_PyObject_AsString(s)) -#define __Pyx_PyObject_FromUString(s) __Pyx_PyObject_FromString((const char*)s) -#define __Pyx_PyBytes_FromUString(s) __Pyx_PyBytes_FromString((const char*)s) -#define __Pyx_PyByteArray_FromUString(s) __Pyx_PyByteArray_FromString((const char*)s) -#define __Pyx_PyStr_FromUString(s) __Pyx_PyStr_FromString((const char*)s) -#define __Pyx_PyUnicode_FromUString(s) __Pyx_PyUnicode_FromString((const char*)s) -#if PY_MAJOR_VERSION < 3 -static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u) -{ +#define __Pyx_PyBytes_AsWritableString(s) ((char*) PyBytes_AS_STRING(s)) +#define __Pyx_PyBytes_AsWritableSString(s) ((signed char*) PyBytes_AS_STRING(s)) +#define __Pyx_PyBytes_AsWritableUString(s) ((unsigned char*) PyBytes_AS_STRING(s)) +#define __Pyx_PyBytes_AsString(s) ((const char*) PyBytes_AS_STRING(s)) +#define __Pyx_PyBytes_AsSString(s) ((const signed char*) PyBytes_AS_STRING(s)) +#define __Pyx_PyBytes_AsUString(s) ((const unsigned char*) PyBytes_AS_STRING(s)) +#define __Pyx_PyObject_AsWritableString(s) ((char*) __Pyx_PyObject_AsString(s)) +#define __Pyx_PyObject_AsWritableSString(s) ((signed char*) __Pyx_PyObject_AsString(s)) +#define __Pyx_PyObject_AsWritableUString(s) ((unsigned char*) __Pyx_PyObject_AsString(s)) +#define __Pyx_PyObject_AsSString(s) ((const signed char*) __Pyx_PyObject_AsString(s)) +#define __Pyx_PyObject_AsUString(s) ((const unsigned char*) __Pyx_PyObject_AsString(s)) +#define __Pyx_PyObject_FromCString(s) __Pyx_PyObject_FromString((const char*)s) +#define __Pyx_PyBytes_FromCString(s) __Pyx_PyBytes_FromString((const char*)s) +#define __Pyx_PyByteArray_FromCString(s) __Pyx_PyByteArray_FromString((const char*)s) +#define __Pyx_PyStr_FromCString(s) __Pyx_PyStr_FromString((const char*)s) +#define __Pyx_PyUnicode_FromCString(s) __Pyx_PyUnicode_FromString((const char*)s) +static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u) { const Py_UNICODE *u_end = u; while (*u_end++) ; return (size_t)(u_end - u - 1); } -#else -#define __Pyx_Py_UNICODE_strlen Py_UNICODE_strlen -#endif #define __Pyx_PyUnicode_FromUnicode(u) PyUnicode_FromUnicode(u, __Pyx_Py_UNICODE_strlen(u)) #define __Pyx_PyUnicode_FromUnicodeAndLength PyUnicode_FromUnicode #define __Pyx_PyUnicode_AsUnicode PyUnicode_AsUnicode -#define __Pyx_Owned_Py_None(b) (Py_INCREF(Py_None), Py_None) -#define __Pyx_PyBool_FromLong(b) ((b) ? (Py_INCREF(Py_True), Py_True) : (Py_INCREF(Py_False), Py_False)) +#define __Pyx_NewRef(obj) (Py_INCREF(obj), obj) +#define __Pyx_Owned_Py_None(b) __Pyx_NewRef(Py_None) +static CYTHON_INLINE PyObject * __Pyx_PyBool_FromLong(long b); static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject*); -static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x); +static CYTHON_INLINE int __Pyx_PyObject_IsTrueAndDecref(PyObject*); +static CYTHON_INLINE PyObject* __Pyx_PyNumber_IntOrLong(PyObject* x); +#define __Pyx_PySequence_Tuple(obj)\ + (likely(PyTuple_CheckExact(obj)) ? __Pyx_NewRef(obj) : PySequence_Tuple(obj)) static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject*); static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t); -#if CYTHON_COMPILING_IN_CPYTHON +#if CYTHON_ASSUME_SAFE_MACROS #define __pyx_PyFloat_AsDouble(x) (PyFloat_CheckExact(x) ? PyFloat_AS_DOUBLE(x) : PyFloat_AsDouble(x)) #else #define __pyx_PyFloat_AsDouble(x) PyFloat_AsDouble(x) #endif #define __pyx_PyFloat_AsFloat(x) ((float) __pyx_PyFloat_AsDouble(x)) +#if PY_MAJOR_VERSION >= 3 +#define __Pyx_PyNumber_Int(x) (PyLong_CheckExact(x) ? __Pyx_NewRef(x) : PyNumber_Long(x)) +#else +#define __Pyx_PyNumber_Int(x) (PyInt_CheckExact(x) ? __Pyx_NewRef(x) : PyNumber_Int(x)) +#endif +#define __Pyx_PyNumber_Float(x) (PyFloat_CheckExact(x) ? __Pyx_NewRef(x) : PyNumber_Float(x)) #if PY_MAJOR_VERSION < 3 && __PYX_DEFAULT_STRING_ENCODING_IS_ASCII static int __Pyx_sys_getdefaultencoding_not_ascii; static int __Pyx_init_sys_getdefaultencoding_params(void) { @@ -328,7 +732,7 @@ static int __Pyx_init_sys_getdefaultencoding_params(void) { const char* default_encoding_c; sys = PyImport_ImportModule("sys"); if (!sys) goto bad; - default_encoding = PyObject_CallMethod(sys, (char*) (const char*) "getdefaultencoding", NULL); + default_encoding = PyObject_CallMethod(sys, (char*) "getdefaultencoding", NULL); Py_DECREF(sys); if (!default_encoding) goto bad; default_encoding_c = PyBytes_AsString(default_encoding); @@ -381,7 +785,7 @@ static int __Pyx_init_sys_getdefaultencoding_params(void) { if (!default_encoding) goto bad; default_encoding_c = PyBytes_AsString(default_encoding); if (!default_encoding_c) goto bad; - __PYX_DEFAULT_STRING_ENCODING = (char*) malloc(strlen(default_encoding_c)); + __PYX_DEFAULT_STRING_ENCODING = (char*) malloc(strlen(default_encoding_c) + 1); if (!__PYX_DEFAULT_STRING_ENCODING) goto bad; strcpy(__PYX_DEFAULT_STRING_ENCODING, default_encoding_c); Py_DECREF(default_encoding); @@ -402,17 +806,21 @@ bad: #define likely(x) (x) #define unlikely(x) (x) #endif /* __GNUC__ */ +static CYTHON_INLINE void __Pyx_pretend_to_initialize(void* ptr) { (void)ptr; } -static PyObject *__pyx_m; +static PyObject *__pyx_m = NULL; static PyObject *__pyx_d; static PyObject *__pyx_b; +static PyObject *__pyx_cython_runtime = NULL; static PyObject *__pyx_empty_tuple; static PyObject *__pyx_empty_bytes; +static PyObject *__pyx_empty_unicode; static int __pyx_lineno; static int __pyx_clineno = 0; static const char * __pyx_cfilenm= __FILE__; static const char *__pyx_filename; +/* Header.proto */ #if !defined(CYTHON_CCOMPLEX) #if defined(__cplusplus) #define CYTHON_CCOMPLEX 1 @@ -438,9 +846,17 @@ static const char *__pyx_filename; static const char *__pyx_f[] = { "GPy/util/choleskies_cython.pyx", "__init__.pxd", - "GPy/util/stringsource", + "stringsource", "type.pxd", }; +/* NoFastGil.proto */ +#define __Pyx_PyGILState_Ensure PyGILState_Ensure +#define __Pyx_PyGILState_Release PyGILState_Release +#define __Pyx_FastGIL_Remember() +#define __Pyx_FastGIL_Forget() +#define __Pyx_FastGilFuncInit() + +/* MemviewSliceStruct.proto */ struct __pyx_memoryview_obj; typedef struct { struct __pyx_memoryview_obj *memview; @@ -449,7 +865,63 @@ typedef struct { Py_ssize_t strides[8]; Py_ssize_t suboffsets[8]; } __Pyx_memviewslice; +#define __Pyx_MemoryView_Len(m) (m.shape[0]) +/* Atomics.proto */ +#include +#ifndef CYTHON_ATOMICS + #define CYTHON_ATOMICS 1 +#endif +#define __pyx_atomic_int_type int +#if CYTHON_ATOMICS && __GNUC__ >= 4 && (__GNUC_MINOR__ > 1 ||\ + (__GNUC_MINOR__ == 1 && __GNUC_PATCHLEVEL >= 2)) &&\ + !defined(__i386__) + #define __pyx_atomic_incr_aligned(value, lock) __sync_fetch_and_add(value, 1) + #define __pyx_atomic_decr_aligned(value, lock) __sync_fetch_and_sub(value, 1) + #ifdef __PYX_DEBUG_ATOMICS + #warning "Using GNU atomics" + #endif +#elif CYTHON_ATOMICS && defined(_MSC_VER) && 0 + #include + #undef __pyx_atomic_int_type + #define __pyx_atomic_int_type LONG + #define __pyx_atomic_incr_aligned(value, lock) InterlockedIncrement(value) + #define __pyx_atomic_decr_aligned(value, lock) InterlockedDecrement(value) + #ifdef __PYX_DEBUG_ATOMICS + #pragma message ("Using MSVC atomics") + #endif +#elif CYTHON_ATOMICS && (defined(__ICC) || defined(__INTEL_COMPILER)) && 0 + #define __pyx_atomic_incr_aligned(value, lock) _InterlockedIncrement(value) + #define __pyx_atomic_decr_aligned(value, lock) _InterlockedDecrement(value) + #ifdef __PYX_DEBUG_ATOMICS + #warning "Using Intel atomics" + #endif +#else + #undef CYTHON_ATOMICS + #define CYTHON_ATOMICS 0 + #ifdef __PYX_DEBUG_ATOMICS + #warning "Not using atomics" + #endif +#endif +typedef volatile __pyx_atomic_int_type __pyx_atomic_int; +#if CYTHON_ATOMICS + #define __pyx_add_acquisition_count(memview)\ + __pyx_atomic_incr_aligned(__pyx_get_slice_count_pointer(memview), memview->lock) + #define __pyx_sub_acquisition_count(memview)\ + __pyx_atomic_decr_aligned(__pyx_get_slice_count_pointer(memview), memview->lock) +#else + #define __pyx_add_acquisition_count(memview)\ + __pyx_add_acquisition_count_locked(__pyx_get_slice_count_pointer(memview), memview->lock) + #define __pyx_sub_acquisition_count(memview)\ + __pyx_sub_acquisition_count_locked(__pyx_get_slice_count_pointer(memview), memview->lock) +#endif + +/* ForceInitThreads.proto */ +#ifndef __PYX_FORCE_INIT_THREADS + #define __PYX_FORCE_INIT_THREADS 0 +#endif + +/* BufferFormatStructs.proto */ #define IS_UNSIGNED(type) (((type) -1) > 0) struct __Pyx_StructField_; #define __PYX_BUF_FLAGS_PACKED_STRUCT (1 << 0) @@ -485,55 +957,8 @@ typedef struct { char is_valid_array; } __Pyx_BufFmt_Context; -#include -#ifndef CYTHON_ATOMICS - #define CYTHON_ATOMICS 1 -#endif -#define __pyx_atomic_int_type int -#if CYTHON_ATOMICS && __GNUC__ >= 4 && (__GNUC_MINOR__ > 1 || \ - (__GNUC_MINOR__ == 1 && __GNUC_PATCHLEVEL >= 2)) && \ - !defined(__i386__) - #define __pyx_atomic_incr_aligned(value, lock) __sync_fetch_and_add(value, 1) - #define __pyx_atomic_decr_aligned(value, lock) __sync_fetch_and_sub(value, 1) - #ifdef __PYX_DEBUG_ATOMICS - #warning "Using GNU atomics" - #endif -#elif CYTHON_ATOMICS && MSC_VER - #include - #define __pyx_atomic_int_type LONG - #define __pyx_atomic_incr_aligned(value, lock) InterlockedIncrement(value) - #define __pyx_atomic_decr_aligned(value, lock) InterlockedDecrement(value) - #ifdef __PYX_DEBUG_ATOMICS - #warning "Using MSVC atomics" - #endif -#elif CYTHON_ATOMICS && (defined(__ICC) || defined(__INTEL_COMPILER)) && 0 - #define __pyx_atomic_incr_aligned(value, lock) _InterlockedIncrement(value) - #define __pyx_atomic_decr_aligned(value, lock) _InterlockedDecrement(value) - #ifdef __PYX_DEBUG_ATOMICS - #warning "Using Intel atomics" - #endif -#else - #undef CYTHON_ATOMICS - #define CYTHON_ATOMICS 0 - #ifdef __PYX_DEBUG_ATOMICS - #warning "Not using atomics" - #endif -#endif -typedef volatile __pyx_atomic_int_type __pyx_atomic_int; -#if CYTHON_ATOMICS - #define __pyx_add_acquisition_count(memview) \ - __pyx_atomic_incr_aligned(__pyx_get_slice_count_pointer(memview), memview->lock) - #define __pyx_sub_acquisition_count(memview) \ - __pyx_atomic_decr_aligned(__pyx_get_slice_count_pointer(memview), memview->lock) -#else - #define __pyx_add_acquisition_count(memview) \ - __pyx_add_acquisition_count_locked(__pyx_get_slice_count_pointer(memview), memview->lock) - #define __pyx_sub_acquisition_count(memview) \ - __pyx_sub_acquisition_count_locked(__pyx_get_slice_count_pointer(memview), memview->lock) -#endif - -/* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":723 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":776 * # in Cython to enable them only on the right systems. * * ctypedef npy_int8 int8_t # <<<<<<<<<<<<<< @@ -542,7 +967,7 @@ typedef volatile __pyx_atomic_int_type __pyx_atomic_int; */ typedef npy_int8 __pyx_t_5numpy_int8_t; -/* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":724 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":777 * * ctypedef npy_int8 int8_t * ctypedef npy_int16 int16_t # <<<<<<<<<<<<<< @@ -551,7 +976,7 @@ typedef npy_int8 __pyx_t_5numpy_int8_t; */ typedef npy_int16 __pyx_t_5numpy_int16_t; -/* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":725 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":778 * ctypedef npy_int8 int8_t * ctypedef npy_int16 int16_t * ctypedef npy_int32 int32_t # <<<<<<<<<<<<<< @@ -560,7 +985,7 @@ typedef npy_int16 __pyx_t_5numpy_int16_t; */ typedef npy_int32 __pyx_t_5numpy_int32_t; -/* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":726 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":779 * ctypedef npy_int16 int16_t * ctypedef npy_int32 int32_t * ctypedef npy_int64 int64_t # <<<<<<<<<<<<<< @@ -569,7 +994,7 @@ typedef npy_int32 __pyx_t_5numpy_int32_t; */ typedef npy_int64 __pyx_t_5numpy_int64_t; -/* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":730 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":783 * #ctypedef npy_int128 int128_t * * ctypedef npy_uint8 uint8_t # <<<<<<<<<<<<<< @@ -578,7 +1003,7 @@ typedef npy_int64 __pyx_t_5numpy_int64_t; */ typedef npy_uint8 __pyx_t_5numpy_uint8_t; -/* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":731 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":784 * * ctypedef npy_uint8 uint8_t * ctypedef npy_uint16 uint16_t # <<<<<<<<<<<<<< @@ -587,7 +1012,7 @@ typedef npy_uint8 __pyx_t_5numpy_uint8_t; */ typedef npy_uint16 __pyx_t_5numpy_uint16_t; -/* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":732 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":785 * ctypedef npy_uint8 uint8_t * ctypedef npy_uint16 uint16_t * ctypedef npy_uint32 uint32_t # <<<<<<<<<<<<<< @@ -596,7 +1021,7 @@ typedef npy_uint16 __pyx_t_5numpy_uint16_t; */ typedef npy_uint32 __pyx_t_5numpy_uint32_t; -/* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":733 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":786 * ctypedef npy_uint16 uint16_t * ctypedef npy_uint32 uint32_t * ctypedef npy_uint64 uint64_t # <<<<<<<<<<<<<< @@ -605,7 +1030,7 @@ typedef npy_uint32 __pyx_t_5numpy_uint32_t; */ typedef npy_uint64 __pyx_t_5numpy_uint64_t; -/* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":737 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":790 * #ctypedef npy_uint128 uint128_t * * ctypedef npy_float32 float32_t # <<<<<<<<<<<<<< @@ -614,7 +1039,7 @@ typedef npy_uint64 __pyx_t_5numpy_uint64_t; */ typedef npy_float32 __pyx_t_5numpy_float32_t; -/* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":738 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":791 * * ctypedef npy_float32 float32_t * ctypedef npy_float64 float64_t # <<<<<<<<<<<<<< @@ -623,7 +1048,7 @@ typedef npy_float32 __pyx_t_5numpy_float32_t; */ typedef npy_float64 __pyx_t_5numpy_float64_t; -/* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":747 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":800 * # The int types are mapped a bit surprising -- * # numpy.int corresponds to 'l' and numpy.long to 'q' * ctypedef npy_long int_t # <<<<<<<<<<<<<< @@ -632,7 +1057,7 @@ typedef npy_float64 __pyx_t_5numpy_float64_t; */ typedef npy_long __pyx_t_5numpy_int_t; -/* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":748 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":801 * # numpy.int corresponds to 'l' and numpy.long to 'q' * ctypedef npy_long int_t * ctypedef npy_longlong long_t # <<<<<<<<<<<<<< @@ -641,7 +1066,7 @@ typedef npy_long __pyx_t_5numpy_int_t; */ typedef npy_longlong __pyx_t_5numpy_long_t; -/* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":749 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":802 * ctypedef npy_long int_t * ctypedef npy_longlong long_t * ctypedef npy_longlong longlong_t # <<<<<<<<<<<<<< @@ -650,7 +1075,7 @@ typedef npy_longlong __pyx_t_5numpy_long_t; */ typedef npy_longlong __pyx_t_5numpy_longlong_t; -/* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":751 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":804 * ctypedef npy_longlong longlong_t * * ctypedef npy_ulong uint_t # <<<<<<<<<<<<<< @@ -659,7 +1084,7 @@ typedef npy_longlong __pyx_t_5numpy_longlong_t; */ typedef npy_ulong __pyx_t_5numpy_uint_t; -/* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":752 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":805 * * ctypedef npy_ulong uint_t * ctypedef npy_ulonglong ulong_t # <<<<<<<<<<<<<< @@ -668,7 +1093,7 @@ typedef npy_ulong __pyx_t_5numpy_uint_t; */ typedef npy_ulonglong __pyx_t_5numpy_ulong_t; -/* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":753 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":806 * ctypedef npy_ulong uint_t * ctypedef npy_ulonglong ulong_t * ctypedef npy_ulonglong ulonglong_t # <<<<<<<<<<<<<< @@ -677,7 +1102,7 @@ typedef npy_ulonglong __pyx_t_5numpy_ulong_t; */ typedef npy_ulonglong __pyx_t_5numpy_ulonglong_t; -/* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":755 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":808 * ctypedef npy_ulonglong ulonglong_t * * ctypedef npy_intp intp_t # <<<<<<<<<<<<<< @@ -686,7 +1111,7 @@ typedef npy_ulonglong __pyx_t_5numpy_ulonglong_t; */ typedef npy_intp __pyx_t_5numpy_intp_t; -/* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":756 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":809 * * ctypedef npy_intp intp_t * ctypedef npy_uintp uintp_t # <<<<<<<<<<<<<< @@ -695,7 +1120,7 @@ typedef npy_intp __pyx_t_5numpy_intp_t; */ typedef npy_uintp __pyx_t_5numpy_uintp_t; -/* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":758 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":811 * ctypedef npy_uintp uintp_t * * ctypedef npy_double float_t # <<<<<<<<<<<<<< @@ -704,7 +1129,7 @@ typedef npy_uintp __pyx_t_5numpy_uintp_t; */ typedef npy_double __pyx_t_5numpy_float_t; -/* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":759 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":812 * * ctypedef npy_double float_t * ctypedef npy_double double_t # <<<<<<<<<<<<<< @@ -713,7 +1138,7 @@ typedef npy_double __pyx_t_5numpy_float_t; */ typedef npy_double __pyx_t_5numpy_double_t; -/* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":760 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":813 * ctypedef npy_double float_t * ctypedef npy_double double_t * ctypedef npy_longdouble longdouble_t # <<<<<<<<<<<<<< @@ -739,6 +1164,7 @@ typedef float __pyx_t_5scipy_6linalg_11cython_blas_s; * ctypedef double complex z */ typedef double __pyx_t_5scipy_6linalg_11cython_blas_d; +/* Declarations.proto */ #if CYTHON_CCOMPLEX #ifdef __cplusplus typedef ::std::complex< float > __pyx_t_float_complex; @@ -748,7 +1174,9 @@ typedef double __pyx_t_5scipy_6linalg_11cython_blas_d; #else typedef struct { float real, imag; } __pyx_t_float_complex; #endif +static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float, float); +/* Declarations.proto */ #if CYTHON_CCOMPLEX #ifdef __cplusplus typedef ::std::complex< double > __pyx_t_double_complex; @@ -758,6 +1186,7 @@ typedef double __pyx_t_5scipy_6linalg_11cython_blas_d; #else typedef struct { double real, imag; } __pyx_t_double_complex; #endif +static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double, double); /*--- Type declarations ---*/ @@ -766,7 +1195,7 @@ struct __pyx_MemviewEnum_obj; struct __pyx_memoryview_obj; struct __pyx_memoryviewslice_obj; -/* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":762 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":815 * ctypedef npy_longdouble longdouble_t * * ctypedef npy_cfloat cfloat_t # <<<<<<<<<<<<<< @@ -775,7 +1204,7 @@ struct __pyx_memoryviewslice_obj; */ typedef npy_cfloat __pyx_t_5numpy_cfloat_t; -/* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":763 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":816 * * ctypedef npy_cfloat cfloat_t * ctypedef npy_cdouble cdouble_t # <<<<<<<<<<<<<< @@ -784,7 +1213,7 @@ typedef npy_cfloat __pyx_t_5numpy_cfloat_t; */ typedef npy_cdouble __pyx_t_5numpy_cdouble_t; -/* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":764 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":817 * ctypedef npy_cfloat cfloat_t * ctypedef npy_cdouble cdouble_t * ctypedef npy_clongdouble clongdouble_t # <<<<<<<<<<<<<< @@ -793,7 +1222,7 @@ typedef npy_cdouble __pyx_t_5numpy_cdouble_t; */ typedef npy_clongdouble __pyx_t_5numpy_clongdouble_t; -/* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":766 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":819 * ctypedef npy_clongdouble clongdouble_t * * ctypedef npy_cdouble complex_t # <<<<<<<<<<<<<< @@ -802,7 +1231,7 @@ typedef npy_clongdouble __pyx_t_5numpy_clongdouble_t; */ typedef npy_cdouble __pyx_t_5numpy_complex_t; -/* "View.MemoryView":99 +/* "View.MemoryView":105 * * @cname("__pyx_array") * cdef class array: # <<<<<<<<<<<<<< @@ -811,6 +1240,7 @@ typedef npy_cdouble __pyx_t_5numpy_complex_t; */ struct __pyx_array_obj { PyObject_HEAD + struct __pyx_vtabstruct_array *__pyx_vtab; char *data; Py_ssize_t len; char *format; @@ -826,7 +1256,7 @@ struct __pyx_array_obj { }; -/* "View.MemoryView":269 +/* "View.MemoryView":279 * * @cname('__pyx_MemviewEnum') * cdef class Enum(object): # <<<<<<<<<<<<<< @@ -839,7 +1269,7 @@ struct __pyx_MemviewEnum_obj { }; -/* "View.MemoryView":302 +/* "View.MemoryView":330 * * @cname('__pyx_memoryview') * cdef class memoryview(object): # <<<<<<<<<<<<<< @@ -862,7 +1292,7 @@ struct __pyx_memoryview_obj { }; -/* "View.MemoryView":922 +/* "View.MemoryView":961 * * @cname('__pyx_memoryviewslice') * cdef class _memoryviewslice(memoryview): # <<<<<<<<<<<<<< @@ -879,7 +1309,21 @@ struct __pyx_memoryviewslice_obj { -/* "View.MemoryView":302 +/* "View.MemoryView":105 + * + * @cname("__pyx_array") + * cdef class array: # <<<<<<<<<<<<<< + * + * cdef: + */ + +struct __pyx_vtabstruct_array { + PyObject *(*get_memview)(struct __pyx_array_obj *); 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-static CYTHON_INLINE PyObject *__Pyx_GetModuleGlobalName(PyObject *name); +/* GetModuleGlobalName.proto */ +#if CYTHON_USE_DICT_VERSIONS +#define __Pyx_GetModuleGlobalName(var, name) {\ + static PY_UINT64_T __pyx_dict_version = 0;\ + static PyObject *__pyx_dict_cached_value = NULL;\ + (var) = (likely(__pyx_dict_version == __PYX_GET_DICT_VERSION(__pyx_d))) ?\ + (likely(__pyx_dict_cached_value) ? __Pyx_NewRef(__pyx_dict_cached_value) : __Pyx_GetBuiltinName(name)) :\ + __Pyx__GetModuleGlobalName(name, &__pyx_dict_version, &__pyx_dict_cached_value);\ +} +#define __Pyx_GetModuleGlobalNameUncached(var, name) {\ + PY_UINT64_T __pyx_dict_version;\ + PyObject *__pyx_dict_cached_value;\ + (var) = __Pyx__GetModuleGlobalName(name, &__pyx_dict_version, &__pyx_dict_cached_value);\ +} +static PyObject *__Pyx__GetModuleGlobalName(PyObject *name, PY_UINT64_T *dict_version, PyObject **dict_cached_value); +#else +#define __Pyx_GetModuleGlobalName(var, name) (var) = __Pyx__GetModuleGlobalName(name) +#define __Pyx_GetModuleGlobalNameUncached(var, name) (var) = __Pyx__GetModuleGlobalName(name) +static CYTHON_INLINE PyObject *__Pyx__GetModuleGlobalName(PyObject *name); +#endif +/* PyCFunctionFastCall.proto */ +#if CYTHON_FAST_PYCCALL +static CYTHON_INLINE PyObject *__Pyx_PyCFunction_FastCall(PyObject *func, PyObject **args, Py_ssize_t nargs); +#else +#define __Pyx_PyCFunction_FastCall(func, args, nargs) (assert(0), NULL) +#endif + +/* PyFunctionFastCall.proto */ +#if CYTHON_FAST_PYCALL +#define __Pyx_PyFunction_FastCall(func, args, nargs)\ + __Pyx_PyFunction_FastCallDict((func), (args), (nargs), NULL) +#if 1 || PY_VERSION_HEX < 0x030600B1 +static PyObject *__Pyx_PyFunction_FastCallDict(PyObject *func, PyObject **args, int nargs, PyObject *kwargs); +#else +#define __Pyx_PyFunction_FastCallDict(func, args, nargs, kwargs) _PyFunction_FastCallDict(func, args, nargs, kwargs) +#endif +#define __Pyx_BUILD_ASSERT_EXPR(cond)\ + (sizeof(char [1 - 2*!(cond)]) - 1) +#ifndef Py_MEMBER_SIZE +#define Py_MEMBER_SIZE(type, member) sizeof(((type *)0)->member) +#endif + static size_t __pyx_pyframe_localsplus_offset = 0; + #include "frameobject.h" + #define __Pxy_PyFrame_Initialize_Offsets()\ + ((void)__Pyx_BUILD_ASSERT_EXPR(sizeof(PyFrameObject) == offsetof(PyFrameObject, f_localsplus) + Py_MEMBER_SIZE(PyFrameObject, f_localsplus)),\ + (void)(__pyx_pyframe_localsplus_offset = ((size_t)PyFrame_Type.tp_basicsize) - Py_MEMBER_SIZE(PyFrameObject, f_localsplus))) + #define __Pyx_PyFrame_GetLocalsplus(frame)\ + (assert(__pyx_pyframe_localsplus_offset), (PyObject **)(((char *)(frame)) + __pyx_pyframe_localsplus_offset)) +#endif + +/* PyObjectCall.proto */ #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyObject_Call(PyObject *func, PyObject *arg, PyObject *kw); #else #define __Pyx_PyObject_Call(func, arg, kw) PyObject_Call(func, arg, kw) #endif +/* PyObjectCall2Args.proto */ +static CYTHON_UNUSED PyObject* __Pyx_PyObject_Call2Args(PyObject* function, PyObject* arg1, PyObject* arg2); + +/* PyObjectCallMethO.proto */ #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyObject_CallMethO(PyObject *func, PyObject *arg); #endif +/* PyObjectCallOneArg.proto */ static CYTHON_INLINE PyObject* __Pyx_PyObject_CallOneArg(PyObject *func, PyObject *arg); -static CYTHON_INLINE int __Pyx_GetBufferAndValidate(Py_buffer* buf, PyObject* obj, - __Pyx_TypeInfo* dtype, int flags, int nd, int cast, __Pyx_BufFmt_StackElem* stack); -static CYTHON_INLINE void __Pyx_SafeReleaseBuffer(Py_buffer* info); - +/* MemviewSliceInit.proto */ #define __Pyx_BUF_MAX_NDIMS %(BUF_MAX_NDIMS)d #define __Pyx_MEMVIEW_DIRECT 1 #define __Pyx_MEMVIEW_PTR 2 @@ -1042,90 +1537,221 @@ static CYTHON_INLINE int __pyx_sub_acquisition_count_locked( static CYTHON_INLINE void __Pyx_INC_MEMVIEW(__Pyx_memviewslice *, int, int); static CYTHON_INLINE void __Pyx_XDEC_MEMVIEW(__Pyx_memviewslice *, int, int); -static CYTHON_INLINE long __Pyx_div_long(long, long); /* proto */ +/* None.proto */ +static CYTHON_INLINE long __Pyx_div_long(long, long); -#ifndef __PYX_FORCE_INIT_THREADS - #define __PYX_FORCE_INIT_THREADS 0 +/* PyThreadStateGet.proto */ +#if CYTHON_FAST_THREAD_STATE +#define __Pyx_PyThreadState_declare PyThreadState *__pyx_tstate; +#define __Pyx_PyThreadState_assign __pyx_tstate = __Pyx_PyThreadState_Current; +#define __Pyx_PyErr_Occurred() __pyx_tstate->curexc_type +#else +#define __Pyx_PyThreadState_declare +#define __Pyx_PyThreadState_assign +#define __Pyx_PyErr_Occurred() PyErr_Occurred() #endif -static CYTHON_INLINE void __Pyx_ErrRestore(PyObject *type, PyObject *value, PyObject *tb); -static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb); +/* PyErrFetchRestore.proto */ +#if CYTHON_FAST_THREAD_STATE +#define __Pyx_PyErr_Clear() __Pyx_ErrRestore(NULL, NULL, NULL) +#define __Pyx_ErrRestoreWithState(type, value, tb) __Pyx_ErrRestoreInState(PyThreadState_GET(), type, value, tb) +#define __Pyx_ErrFetchWithState(type, value, tb) __Pyx_ErrFetchInState(PyThreadState_GET(), type, value, tb) +#define __Pyx_ErrRestore(type, value, tb) __Pyx_ErrRestoreInState(__pyx_tstate, type, value, tb) +#define __Pyx_ErrFetch(type, value, tb) __Pyx_ErrFetchInState(__pyx_tstate, type, value, tb) +static CYTHON_INLINE void __Pyx_ErrRestoreInState(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb); +static CYTHON_INLINE void __Pyx_ErrFetchInState(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb); +#if CYTHON_COMPILING_IN_CPYTHON +#define __Pyx_PyErr_SetNone(exc) (Py_INCREF(exc), __Pyx_ErrRestore((exc), NULL, NULL)) +#else +#define __Pyx_PyErr_SetNone(exc) PyErr_SetNone(exc) +#endif +#else +#define __Pyx_PyErr_Clear() PyErr_Clear() +#define __Pyx_PyErr_SetNone(exc) PyErr_SetNone(exc) +#define __Pyx_ErrRestoreWithState(type, value, tb) PyErr_Restore(type, value, tb) +#define __Pyx_ErrFetchWithState(type, value, tb) PyErr_Fetch(type, value, tb) +#define __Pyx_ErrRestoreInState(tstate, type, value, tb) PyErr_Restore(type, value, tb) +#define __Pyx_ErrFetchInState(tstate, type, value, tb) PyErr_Fetch(type, value, tb) +#define __Pyx_ErrRestore(type, value, tb) PyErr_Restore(type, value, tb) +#define __Pyx_ErrFetch(type, value, tb) PyErr_Fetch(type, value, tb) +#endif +/* WriteUnraisableException.proto */ static void __Pyx_WriteUnraisable(const char *name, int clineno, int lineno, const char *filename, - int full_traceback); + int full_traceback, int nogil); +/* RaiseException.proto */ static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause); +/* DictGetItem.proto */ +#if PY_MAJOR_VERSION >= 3 && !CYTHON_COMPILING_IN_PYPY +static PyObject *__Pyx_PyDict_GetItem(PyObject *d, PyObject* key); +#define __Pyx_PyObject_Dict_GetItem(obj, name)\ + (likely(PyDict_CheckExact(obj)) ?\ + __Pyx_PyDict_GetItem(obj, name) : PyObject_GetItem(obj, name)) +#else +#define __Pyx_PyDict_GetItem(d, key) PyObject_GetItem(d, key) +#define __Pyx_PyObject_Dict_GetItem(obj, name) PyObject_GetItem(obj, name) +#endif + +/* RaiseTooManyValuesToUnpack.proto */ static CYTHON_INLINE void __Pyx_RaiseTooManyValuesError(Py_ssize_t expected); +/* RaiseNeedMoreValuesToUnpack.proto */ static CYTHON_INLINE void __Pyx_RaiseNeedMoreValuesError(Py_ssize_t index); +/* RaiseNoneIterError.proto */ static CYTHON_INLINE void __Pyx_RaiseNoneNotIterableError(void); +/* ExtTypeTest.proto */ static CYTHON_INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type); -static CYTHON_INLINE int __Pyx_ArgTypeTest(PyObject *obj, PyTypeObject *type, int none_allowed, - const char *name, int exact); +/* GetTopmostException.proto */ +#if CYTHON_USE_EXC_INFO_STACK +static _PyErr_StackItem * __Pyx_PyErr_GetTopmostException(PyThreadState *tstate); +#endif +/* SaveResetException.proto */ +#if CYTHON_FAST_THREAD_STATE +#define __Pyx_ExceptionSave(type, value, tb) __Pyx__ExceptionSave(__pyx_tstate, type, value, tb) +static CYTHON_INLINE void __Pyx__ExceptionSave(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb); +#define __Pyx_ExceptionReset(type, value, tb) __Pyx__ExceptionReset(__pyx_tstate, type, value, tb) +static CYTHON_INLINE void __Pyx__ExceptionReset(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb); +#else +#define __Pyx_ExceptionSave(type, value, tb) PyErr_GetExcInfo(type, value, tb) +#define __Pyx_ExceptionReset(type, value, tb) PyErr_SetExcInfo(type, value, tb) +#endif + +/* PyErrExceptionMatches.proto */ +#if CYTHON_FAST_THREAD_STATE +#define __Pyx_PyErr_ExceptionMatches(err) __Pyx_PyErr_ExceptionMatchesInState(__pyx_tstate, err) +static CYTHON_INLINE int __Pyx_PyErr_ExceptionMatchesInState(PyThreadState* tstate, PyObject* err); +#else +#define __Pyx_PyErr_ExceptionMatches(err) PyErr_ExceptionMatches(err) +#endif + +/* GetException.proto */ +#if CYTHON_FAST_THREAD_STATE +#define __Pyx_GetException(type, value, tb) __Pyx__GetException(__pyx_tstate, type, value, tb) +static int __Pyx__GetException(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb); +#else +static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb); +#endif + +/* ArgTypeTest.proto */ +#define __Pyx_ArgTypeTest(obj, type, none_allowed, name, exact)\ + ((likely((Py_TYPE(obj) == type) | (none_allowed && (obj == Py_None)))) ? 1 :\ + __Pyx__ArgTypeTest(obj, type, name, exact)) +static int __Pyx__ArgTypeTest(PyObject *obj, PyTypeObject *type, const char *name, int exact); + +/* IncludeStringH.proto */ #include +/* BytesEquals.proto */ static CYTHON_INLINE int __Pyx_PyBytes_Equals(PyObject* s1, PyObject* s2, int equals); +/* UnicodeEquals.proto */ static CYTHON_INLINE int __Pyx_PyUnicode_Equals(PyObject* s1, PyObject* s2, int equals); +/* StrEquals.proto */ #if PY_MAJOR_VERSION >= 3 #define __Pyx_PyString_Equals __Pyx_PyUnicode_Equals #else #define __Pyx_PyString_Equals __Pyx_PyBytes_Equals #endif -static CYTHON_INLINE Py_ssize_t __Pyx_div_Py_ssize_t(Py_ssize_t, Py_ssize_t); /* proto */ +/* None.proto */ +static CYTHON_INLINE Py_ssize_t __Pyx_div_Py_ssize_t(Py_ssize_t, Py_ssize_t); -#define UNARY_NEG_WOULD_OVERFLOW(x) (((x) < 0) & ((unsigned long)(x) == 0-(unsigned long)(x))) +/* UnaryNegOverflows.proto */ +#define UNARY_NEG_WOULD_OVERFLOW(x)\ + (((x) < 0) & ((unsigned long)(x) == 0-(unsigned long)(x))) static CYTHON_UNUSED int __pyx_array_getbuffer(PyObject *__pyx_v_self, Py_buffer *__pyx_v_info, int __pyx_v_flags); /*proto*/ -static PyObject *get_memview(PyObject *__pyx_v_self); /*proto*/ +static PyObject *__pyx_array_get_memview(struct __pyx_array_obj *); /*proto*/ +/* GetAttr.proto */ static CYTHON_INLINE PyObject *__Pyx_GetAttr(PyObject *, PyObject *); +/* GetItemInt.proto */ +#define __Pyx_GetItemInt(o, i, type, is_signed, to_py_func, is_list, wraparound, boundscheck)\ + (__Pyx_fits_Py_ssize_t(i, type, is_signed) ?\ + __Pyx_GetItemInt_Fast(o, (Py_ssize_t)i, is_list, wraparound, boundscheck) :\ + (is_list ? (PyErr_SetString(PyExc_IndexError, "list index out of range"), (PyObject*)NULL) :\ + __Pyx_GetItemInt_Generic(o, to_py_func(i)))) +#define __Pyx_GetItemInt_List(o, i, type, is_signed, to_py_func, is_list, wraparound, boundscheck)\ + (__Pyx_fits_Py_ssize_t(i, type, is_signed) ?\ + __Pyx_GetItemInt_List_Fast(o, (Py_ssize_t)i, wraparound, boundscheck) :\ + (PyErr_SetString(PyExc_IndexError, "list index out of range"), (PyObject*)NULL)) +static CYTHON_INLINE PyObject *__Pyx_GetItemInt_List_Fast(PyObject *o, Py_ssize_t i, + int wraparound, int boundscheck); +#define __Pyx_GetItemInt_Tuple(o, i, type, is_signed, to_py_func, is_list, wraparound, boundscheck)\ + (__Pyx_fits_Py_ssize_t(i, type, is_signed) ?\ + __Pyx_GetItemInt_Tuple_Fast(o, (Py_ssize_t)i, wraparound, boundscheck) :\ + (PyErr_SetString(PyExc_IndexError, "tuple index out of range"), (PyObject*)NULL)) +static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Tuple_Fast(PyObject *o, Py_ssize_t i, + int wraparound, int boundscheck); +static PyObject *__Pyx_GetItemInt_Generic(PyObject *o, PyObject* j); +static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Fast(PyObject *o, Py_ssize_t i, + int is_list, int wraparound, int boundscheck); + +/* ObjectGetItem.proto */ +#if CYTHON_USE_TYPE_SLOTS +static CYTHON_INLINE PyObject *__Pyx_PyObject_GetItem(PyObject *obj, PyObject* key); +#else +#define __Pyx_PyObject_GetItem(obj, key) PyObject_GetItem(obj, key) +#endif + +/* decode_c_string_utf16.proto */ +static CYTHON_INLINE PyObject *__Pyx_PyUnicode_DecodeUTF16(const char *s, Py_ssize_t size, const char *errors) { + int byteorder = 0; + return PyUnicode_DecodeUTF16(s, size, errors, &byteorder); +} +static CYTHON_INLINE PyObject *__Pyx_PyUnicode_DecodeUTF16LE(const char *s, Py_ssize_t size, const char *errors) { + int byteorder = -1; + return PyUnicode_DecodeUTF16(s, size, errors, &byteorder); +} +static CYTHON_INLINE PyObject *__Pyx_PyUnicode_DecodeUTF16BE(const char *s, Py_ssize_t size, const char *errors) { + int byteorder = 1; + return PyUnicode_DecodeUTF16(s, size, errors, &byteorder); +} + +/* decode_c_string.proto */ static CYTHON_INLINE PyObject* __Pyx_decode_c_string( const char* cstring, Py_ssize_t start, Py_ssize_t stop, const char* encoding, const char* errors, PyObject* (*decode_func)(const char *s, Py_ssize_t size, const char *errors)); -static CYTHON_INLINE void __Pyx_ExceptionSave(PyObject **type, PyObject **value, PyObject **tb); -static void __Pyx_ExceptionReset(PyObject *type, PyObject *value, PyObject *tb); - -static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb); +/* GetAttr3.proto */ +static CYTHON_INLINE PyObject *__Pyx_GetAttr3(PyObject *, PyObject *, PyObject *); +/* SwapException.proto */ +#if CYTHON_FAST_THREAD_STATE +#define __Pyx_ExceptionSwap(type, value, tb) __Pyx__ExceptionSwap(__pyx_tstate, type, value, tb) +static CYTHON_INLINE void __Pyx__ExceptionSwap(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb); +#else static CYTHON_INLINE void __Pyx_ExceptionSwap(PyObject **type, PyObject **value, PyObject **tb); +#endif -#define __Pyx_GetItemInt(o, i, type, is_signed, to_py_func, is_list, wraparound, boundscheck) \ - (__Pyx_fits_Py_ssize_t(i, type, is_signed) ? \ - __Pyx_GetItemInt_Fast(o, (Py_ssize_t)i, is_list, wraparound, boundscheck) : \ - (is_list ? (PyErr_SetString(PyExc_IndexError, "list index out of range"), (PyObject*)NULL) : \ - __Pyx_GetItemInt_Generic(o, to_py_func(i)))) -#define __Pyx_GetItemInt_List(o, i, type, is_signed, to_py_func, is_list, wraparound, boundscheck) \ - (__Pyx_fits_Py_ssize_t(i, type, is_signed) ? \ - __Pyx_GetItemInt_List_Fast(o, (Py_ssize_t)i, wraparound, boundscheck) : \ - (PyErr_SetString(PyExc_IndexError, "list index out of range"), (PyObject*)NULL)) -static CYTHON_INLINE PyObject *__Pyx_GetItemInt_List_Fast(PyObject *o, Py_ssize_t i, - int wraparound, int boundscheck); -#define __Pyx_GetItemInt_Tuple(o, i, type, is_signed, to_py_func, is_list, wraparound, boundscheck) \ - (__Pyx_fits_Py_ssize_t(i, type, is_signed) ? \ - __Pyx_GetItemInt_Tuple_Fast(o, (Py_ssize_t)i, wraparound, boundscheck) : \ - (PyErr_SetString(PyExc_IndexError, "tuple index out of range"), (PyObject*)NULL)) -static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Tuple_Fast(PyObject *o, Py_ssize_t i, - int wraparound, int boundscheck); -static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Generic(PyObject *o, PyObject* j); -static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Fast(PyObject *o, Py_ssize_t i, - int is_list, int wraparound, int boundscheck); +/* Import.proto */ +static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level); + +/* FastTypeChecks.proto */ +#if CYTHON_COMPILING_IN_CPYTHON +#define __Pyx_TypeCheck(obj, type) __Pyx_IsSubtype(Py_TYPE(obj), (PyTypeObject *)type) +static CYTHON_INLINE int __Pyx_IsSubtype(PyTypeObject *a, PyTypeObject *b); +static CYTHON_INLINE int __Pyx_PyErr_GivenExceptionMatches(PyObject *err, PyObject *type); +static CYTHON_INLINE int __Pyx_PyErr_GivenExceptionMatches2(PyObject *err, PyObject *type1, PyObject *type2); +#else +#define __Pyx_TypeCheck(obj, type) PyObject_TypeCheck(obj, (PyTypeObject *)type) +#define __Pyx_PyErr_GivenExceptionMatches(err, type) PyErr_GivenExceptionMatches(err, type) +#define __Pyx_PyErr_GivenExceptionMatches2(err, type1, type2) (PyErr_GivenExceptionMatches(err, type1) || PyErr_GivenExceptionMatches(err, type2)) +#endif +#define __Pyx_PyException_Check(obj) __Pyx_TypeCheck(obj, PyExc_Exception) static CYTHON_UNUSED int __pyx_memoryview_getbuffer(PyObject *__pyx_v_self, Py_buffer *__pyx_v_info, int __pyx_v_flags); /*proto*/ -static PyObject *__pyx_memoryview_transpose(PyObject *__pyx_v_self); /*proto*/ -static PyObject *__pyx_memoryview__get__base(PyObject *__pyx_v_self); /*proto*/ -static PyObject *__pyx_memoryview_get_shape(PyObject *__pyx_v_self); /*proto*/ -#if CYTHON_COMPILING_IN_CPYTHON +/* ListCompAppend.proto */ +#if CYTHON_USE_PYLIST_INTERNALS && CYTHON_ASSUME_SAFE_MACROS static CYTHON_INLINE int __Pyx_ListComp_Append(PyObject* list, PyObject* x) { PyListObject* L = (PyListObject*) list; Py_ssize_t len = Py_SIZE(list); @@ -1141,12 +1767,15 @@ static CYTHON_INLINE int __Pyx_ListComp_Append(PyObject* list, PyObject* x) { #define __Pyx_ListComp_Append(L,x) PyList_Append(L,x) #endif -static PyObject *__pyx_memoryview_get_strides(PyObject *__pyx_v_self); /*proto*/ -static PyObject *__pyx_memoryview_get_suboffsets(PyObject *__pyx_v_self); /*proto*/ -static PyObject *__pyx_memoryview_get_ndim(PyObject *__pyx_v_self); /*proto*/ -static PyObject *__pyx_memoryview_get_itemsize(PyObject *__pyx_v_self); /*proto*/ -static PyObject *__pyx_memoryview_get_nbytes(PyObject *__pyx_v_self); /*proto*/ -static PyObject *__pyx_memoryview_get_size(PyObject *__pyx_v_self); /*proto*/ +/* PyIntBinop.proto */ +#if !CYTHON_COMPILING_IN_PYPY +static PyObject* __Pyx_PyInt_AddObjC(PyObject *op1, PyObject *op2, long intval, int inplace); +#else +#define __Pyx_PyInt_AddObjC(op1, op2, intval, inplace)\ + (inplace ? PyNumber_InPlaceAdd(op1, op2) : PyNumber_Add(op1, op2)) +#endif + +/* ListExtend.proto */ static CYTHON_INLINE int __Pyx_PyList_Extend(PyObject* L, PyObject* v) { #if CYTHON_COMPILING_IN_CPYTHON PyObject* none = _PyList_Extend((PyListObject*)L, v); @@ -1159,7 +1788,8 @@ static CYTHON_INLINE int __Pyx_PyList_Extend(PyObject* L, PyObject* v) { #endif } -#if CYTHON_COMPILING_IN_CPYTHON +/* ListAppend.proto */ +#if CYTHON_USE_PYLIST_INTERNALS && CYTHON_ASSUME_SAFE_MACROS static CYTHON_INLINE int __Pyx_PyList_Append(PyObject* list, PyObject* x) { PyListObject* L = (PyListObject*) list; Py_ssize_t len = Py_SIZE(list); @@ -1175,14 +1805,57 @@ static CYTHON_INLINE int __Pyx_PyList_Append(PyObject* list, PyObject* x) { #define __Pyx_PyList_Append(L,x) PyList_Append(L,x) #endif +/* None.proto */ static CYTHON_INLINE void __Pyx_RaiseUnboundLocalError(const char *varname); -static PyObject *__pyx_memoryviewslice__get__base(PyObject *__pyx_v_self); /*proto*/ +/* ImportFrom.proto */ +static PyObject* __Pyx_ImportFrom(PyObject* module, PyObject* name); + +/* HasAttr.proto */ +static CYTHON_INLINE int __Pyx_HasAttr(PyObject *, PyObject *); + +/* PyObject_GenericGetAttrNoDict.proto */ +#if CYTHON_USE_TYPE_SLOTS && CYTHON_USE_PYTYPE_LOOKUP && PY_VERSION_HEX < 0x03070000 +static CYTHON_INLINE PyObject* __Pyx_PyObject_GenericGetAttrNoDict(PyObject* obj, PyObject* attr_name); +#else +#define __Pyx_PyObject_GenericGetAttrNoDict PyObject_GenericGetAttr +#endif + +/* PyObject_GenericGetAttr.proto */ +#if CYTHON_USE_TYPE_SLOTS && CYTHON_USE_PYTYPE_LOOKUP && PY_VERSION_HEX < 0x03070000 +static PyObject* __Pyx_PyObject_GenericGetAttr(PyObject* obj, PyObject* attr_name); +#else +#define __Pyx_PyObject_GenericGetAttr PyObject_GenericGetAttr +#endif + +/* SetVTable.proto */ static int __Pyx_SetVtable(PyObject *dict, void *vtable); +/* SetupReduce.proto */ +static int __Pyx_setup_reduce(PyObject* type_obj); + +/* TypeImport.proto */ +#ifndef __PYX_HAVE_RT_ImportType_proto +#define __PYX_HAVE_RT_ImportType_proto +enum __Pyx_ImportType_CheckSize { + __Pyx_ImportType_CheckSize_Error = 0, + __Pyx_ImportType_CheckSize_Warn = 1, + __Pyx_ImportType_CheckSize_Ignore = 2 +}; +static PyTypeObject *__Pyx_ImportType(PyObject* module, const char *module_name, const char *class_name, size_t size, enum __Pyx_ImportType_CheckSize check_size); +#endif + +/* CLineInTraceback.proto */ +#ifdef CYTHON_CLINE_IN_TRACEBACK +#define __Pyx_CLineForTraceback(tstate, c_line) (((CYTHON_CLINE_IN_TRACEBACK)) ? c_line : 0) +#else +static int __Pyx_CLineForTraceback(PyThreadState *tstate, int c_line); +#endif + +/* CodeObjectCache.proto */ typedef struct { - int code_line; PyCodeObject* code_object; + int code_line; } __Pyx_CodeObjectCacheEntry; struct __Pyx_CodeObjectCache { int count; @@ -1194,9 +1867,20 @@ static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int co static PyCodeObject *__pyx_find_code_object(int code_line); static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object); +/* AddTraceback.proto */ static void __Pyx_AddTraceback(const char *funcname, int c_line, int py_line, const char *filename); +#if PY_MAJOR_VERSION < 3 + static int __Pyx_GetBuffer(PyObject *obj, Py_buffer *view, int flags); + static void __Pyx_ReleaseBuffer(Py_buffer *view); +#else + #define __Pyx_GetBuffer PyObject_GetBuffer + #define __Pyx_ReleaseBuffer PyBuffer_Release +#endif + + +/* BufferStructDeclare.proto */ typedef struct { Py_ssize_t shape, strides, suboffsets; } __Pyx_Buf_DimInfo; @@ -1210,22 +1894,30 @@ typedef struct { __Pyx_Buf_DimInfo diminfo[8]; } __Pyx_LocalBuf_ND; -#if PY_MAJOR_VERSION < 3 - static int __Pyx_GetBuffer(PyObject *obj, Py_buffer *view, int flags); - static void __Pyx_ReleaseBuffer(Py_buffer *view); -#else - #define __Pyx_GetBuffer PyObject_GetBuffer - #define __Pyx_ReleaseBuffer PyBuffer_Release -#endif +/* MemviewSliceIsContig.proto */ +static int __pyx_memviewslice_is_contig(const __Pyx_memviewslice mvs, char order, int ndim); +/* OverlappingSlices.proto */ +static int __pyx_slices_overlap(__Pyx_memviewslice *slice1, + __Pyx_memviewslice *slice2, + int ndim, size_t itemsize); -static Py_ssize_t __Pyx_zeros[] = {0, 0, 0, 0, 0, 0, 0, 0}; -static Py_ssize_t __Pyx_minusones[] = {-1, -1, -1, -1, -1, -1, -1, -1}; +/* Capsule.proto */ +static CYTHON_INLINE PyObject *__pyx_capsule_create(void *p, const char *sig); -static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level); +/* IsLittleEndian.proto */ +static CYTHON_INLINE int __Pyx_Is_Little_Endian(void); +/* BufferFormatCheck.proto */ +static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const char* ts); +static void __Pyx_BufFmt_Init(__Pyx_BufFmt_Context* ctx, + __Pyx_BufFmt_StackElem* stack, + __Pyx_TypeInfo* type); + +/* TypeInfoCompare.proto */ static int __pyx_typeinfo_cmp(__Pyx_TypeInfo *a, __Pyx_TypeInfo *b); +/* MemviewSliceValidateAndInit.proto */ static int __Pyx_ValidateAndInit_memviewslice( int *axes_specs, int c_or_f_flag, @@ -1236,19 +1928,23 @@ static int __Pyx_ValidateAndInit_memviewslice( __Pyx_memviewslice *memviewslice, PyObject *original_obj); -static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_dsds_double(PyObject *); +/* ObjectToMemviewSlice.proto */ +static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_dsds_double(PyObject *, int writable_flag); -static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *); - -static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_dsdsds_double(PyObject *); +/* ObjectToMemviewSlice.proto */ +static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_dsdsds_double(PyObject *, int writable_flag); +/* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value); +/* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value); -static PyObject *__pyx_memview_get_double(const char *itemp); -static int __pyx_memview_set_double(const char *itemp, PyObject *obj); +/* MemviewDtypeToObject.proto */ +static CYTHON_INLINE PyObject *__pyx_memview_get_double(const char *itemp); +static CYTHON_INLINE int __pyx_memview_set_double(const char *itemp, PyObject *obj); +/* RealImag.proto */ #if CYTHON_CCOMPLEX #ifdef __cplusplus #define __Pyx_CREAL(z) ((z).real()) @@ -1261,7 +1957,8 @@ static int __pyx_memview_set_double(const char *itemp, PyObject *obj); #define __Pyx_CREAL(z) ((z).real) #define __Pyx_CIMAG(z) ((z).imag) #endif -#if (defined(_WIN32) || defined(__clang__)) && defined(__cplusplus) && CYTHON_CCOMPLEX +#if defined(__cplusplus) && CYTHON_CCOMPLEX\ + && (defined(_WIN32) || defined(__clang__) || (defined(__GNUC__) && (__GNUC__ >= 5 || __GNUC__ == 4 && __GNUC_MINOR__ >= 4 )) || __cplusplus >= 201103) #define __Pyx_SET_CREAL(z,x) ((z).real(x)) #define __Pyx_SET_CIMAG(z,y) ((z).imag(y)) #else @@ -1269,125 +1966,117 @@ static int __pyx_memview_set_double(const char *itemp, PyObject *obj); #define __Pyx_SET_CIMAG(z,y) __Pyx_CIMAG(z) = (y) #endif -static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float, float); - +/* Arithmetic.proto */ #if CYTHON_CCOMPLEX - #define __Pyx_c_eqf(a, b) ((a)==(b)) - #define __Pyx_c_sumf(a, b) ((a)+(b)) - #define __Pyx_c_difff(a, b) ((a)-(b)) - #define __Pyx_c_prodf(a, b) ((a)*(b)) - #define __Pyx_c_quotf(a, b) ((a)/(b)) - #define __Pyx_c_negf(a) (-(a)) + #define __Pyx_c_eq_float(a, b) ((a)==(b)) + #define __Pyx_c_sum_float(a, b) ((a)+(b)) + #define __Pyx_c_diff_float(a, b) ((a)-(b)) + #define __Pyx_c_prod_float(a, b) ((a)*(b)) + #define __Pyx_c_quot_float(a, b) ((a)/(b)) + #define __Pyx_c_neg_float(a) (-(a)) #ifdef __cplusplus - #define __Pyx_c_is_zerof(z) ((z)==(float)0) - #define __Pyx_c_conjf(z) (::std::conj(z)) + #define __Pyx_c_is_zero_float(z) ((z)==(float)0) + #define __Pyx_c_conj_float(z) (::std::conj(z)) #if 1 - #define __Pyx_c_absf(z) (::std::abs(z)) - #define __Pyx_c_powf(a, b) (::std::pow(a, b)) + #define __Pyx_c_abs_float(z) (::std::abs(z)) + #define __Pyx_c_pow_float(a, b) (::std::pow(a, b)) #endif #else - #define __Pyx_c_is_zerof(z) ((z)==0) - #define __Pyx_c_conjf(z) (conjf(z)) + #define __Pyx_c_is_zero_float(z) ((z)==0) + #define __Pyx_c_conj_float(z) (conjf(z)) #if 1 - #define __Pyx_c_absf(z) (cabsf(z)) - #define __Pyx_c_powf(a, b) (cpowf(a, b)) + #define __Pyx_c_abs_float(z) (cabsf(z)) + #define __Pyx_c_pow_float(a, b) (cpowf(a, b)) #endif #endif #else - static CYTHON_INLINE int __Pyx_c_eqf(__pyx_t_float_complex, __pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sumf(__pyx_t_float_complex, __pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_difff(__pyx_t_float_complex, __pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_prodf(__pyx_t_float_complex, __pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quotf(__pyx_t_float_complex, __pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_negf(__pyx_t_float_complex); - static CYTHON_INLINE int __Pyx_c_is_zerof(__pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conjf(__pyx_t_float_complex); + static CYTHON_INLINE int __Pyx_c_eq_float(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sum_float(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_diff_float(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_prod_float(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quot_float(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_neg_float(__pyx_t_float_complex); + static CYTHON_INLINE int __Pyx_c_is_zero_float(__pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conj_float(__pyx_t_float_complex); #if 1 - static CYTHON_INLINE float __Pyx_c_absf(__pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_powf(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE float __Pyx_c_abs_float(__pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_pow_float(__pyx_t_float_complex, __pyx_t_float_complex); #endif #endif -static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double, double); - +/* Arithmetic.proto */ #if CYTHON_CCOMPLEX - #define __Pyx_c_eq(a, b) ((a)==(b)) - #define __Pyx_c_sum(a, b) ((a)+(b)) - #define __Pyx_c_diff(a, b) ((a)-(b)) - #define __Pyx_c_prod(a, b) ((a)*(b)) - #define __Pyx_c_quot(a, b) ((a)/(b)) - #define __Pyx_c_neg(a) (-(a)) + #define __Pyx_c_eq_double(a, b) ((a)==(b)) + #define __Pyx_c_sum_double(a, b) ((a)+(b)) + #define __Pyx_c_diff_double(a, b) ((a)-(b)) + #define __Pyx_c_prod_double(a, b) ((a)*(b)) + #define __Pyx_c_quot_double(a, b) ((a)/(b)) + #define __Pyx_c_neg_double(a) (-(a)) #ifdef __cplusplus - #define __Pyx_c_is_zero(z) ((z)==(double)0) - #define __Pyx_c_conj(z) (::std::conj(z)) + #define __Pyx_c_is_zero_double(z) ((z)==(double)0) + #define __Pyx_c_conj_double(z) (::std::conj(z)) #if 1 - #define __Pyx_c_abs(z) (::std::abs(z)) - #define __Pyx_c_pow(a, b) (::std::pow(a, b)) + #define __Pyx_c_abs_double(z) (::std::abs(z)) + #define __Pyx_c_pow_double(a, b) (::std::pow(a, b)) #endif #else - #define __Pyx_c_is_zero(z) ((z)==0) - #define __Pyx_c_conj(z) (conj(z)) + #define __Pyx_c_is_zero_double(z) ((z)==0) + #define __Pyx_c_conj_double(z) (conj(z)) #if 1 - #define __Pyx_c_abs(z) (cabs(z)) - #define __Pyx_c_pow(a, b) (cpow(a, b)) + #define __Pyx_c_abs_double(z) (cabs(z)) + #define __Pyx_c_pow_double(a, b) (cpow(a, b)) #endif #endif #else - static CYTHON_INLINE int __Pyx_c_eq(__pyx_t_double_complex, __pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum(__pyx_t_double_complex, __pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff(__pyx_t_double_complex, __pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_prod(__pyx_t_double_complex, __pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot(__pyx_t_double_complex, __pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg(__pyx_t_double_complex); - static CYTHON_INLINE int __Pyx_c_is_zero(__pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj(__pyx_t_double_complex); + static CYTHON_INLINE int __Pyx_c_eq_double(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum_double(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff_double(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_prod_double(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot_double(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg_double(__pyx_t_double_complex); + static CYTHON_INLINE int __Pyx_c_is_zero_double(__pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj_double(__pyx_t_double_complex); #if 1 - static CYTHON_INLINE double __Pyx_c_abs(__pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE double __Pyx_c_abs_double(__pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow_double(__pyx_t_double_complex, __pyx_t_double_complex); #endif #endif -static int __pyx_memviewslice_is_contig(const __Pyx_memviewslice *mvs, - char order, int ndim); - -static int __pyx_slices_overlap(__Pyx_memviewslice *slice1, - __Pyx_memviewslice *slice2, - int ndim, size_t itemsize); +/* CIntToPy.proto */ +static CYTHON_INLINE PyObject* __Pyx_PyInt_From_enum__NPY_TYPES(enum NPY_TYPES value); +/* MemviewSliceCopyTemplate.proto */ static __Pyx_memviewslice __pyx_memoryview_copy_new_contig(const __Pyx_memviewslice *from_mvs, const char *mode, int ndim, size_t sizeof_dtype, int contig_flag, int dtype_is_object); -static CYTHON_INLINE PyObject *__pyx_capsule_create(void *p, const char *sig); - -static CYTHON_INLINE char __Pyx_PyInt_As_char(PyObject *); +/* CIntFromPy.proto */ +static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *); +/* CIntFromPy.proto */ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *); -static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_d_d_dc_double(PyObject *); +/* CIntFromPy.proto */ +static CYTHON_INLINE char __Pyx_PyInt_As_char(PyObject *); -static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_d_dc_double(PyObject *); +/* ObjectToMemviewSlice.proto */ +static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_d_d_dc_double(PyObject *, int writable_flag); +/* ObjectToMemviewSlice.proto */ +static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_d_dc_double(PyObject *, int writable_flag); + +/* CheckBinaryVersion.proto */ static int __Pyx_check_binary_version(void); -#if !defined(__Pyx_PyIdentifier_FromString) -#if PY_MAJOR_VERSION < 3 - #define __Pyx_PyIdentifier_FromString(s) PyString_FromString(s) -#else - #define __Pyx_PyIdentifier_FromString(s) PyUnicode_FromString(s) -#endif -#endif - -static PyObject *__Pyx_ImportModule(const char *name); - -static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name, size_t size, int strict); - +/* FunctionImport.proto */ static int __Pyx_ImportFunction(PyObject *module, const char *funcname, void (**f)(void), const char *sig); +/* InitStrings.proto */ static int __Pyx_InitStrings(__Pyx_StringTabEntry *t); +static PyObject *__pyx_array_get_memview(struct __pyx_array_obj *__pyx_v_self); /* proto*/ static char *__pyx_memoryview_get_item_pointer(struct __pyx_memoryview_obj *__pyx_v_self, PyObject *__pyx_v_index); /* proto*/ static PyObject *__pyx_memoryview_is_slice(struct __pyx_memoryview_obj *__pyx_v_self, PyObject *__pyx_v_obj); /* proto*/ static PyObject *__pyx_memoryview_setitem_slice_assignment(struct __pyx_memoryview_obj *__pyx_v_self, PyObject *__pyx_v_dst, PyObject *__pyx_v_src); /* proto*/ @@ -1400,20 +2089,22 @@ static PyObject *__pyx_memoryviewslice_assign_item_from_object(struct __pyx_memo /* Module declarations from 'cpython.buffer' */ -/* Module declarations from 'cpython.ref' */ - /* Module declarations from 'libc.string' */ /* Module declarations from 'libc.stdio' */ -/* Module declarations from 'cpython.object' */ - /* Module declarations from '__builtin__' */ /* Module declarations from 'cpython.type' */ static PyTypeObject *__pyx_ptype_7cpython_4type_type = 0; -/* Module declarations from 'libc.stdlib' */ +/* Module declarations from 'cpython' */ + +/* Module declarations from 'cpython.object' */ + +/* Module declarations from 'cpython.ref' */ + +/* Module declarations from 'cpython.mem' */ /* Module declarations from 'numpy' */ @@ -1424,6 +2115,7 @@ static PyTypeObject *__pyx_ptype_5numpy_broadcast = 0; static PyTypeObject *__pyx_ptype_5numpy_ndarray = 0; static PyTypeObject *__pyx_ptype_5numpy_ufunc = 0; static CYTHON_INLINE char *__pyx_f_5numpy__util_dtypestring(PyArray_Descr *, char *, char *, int *); /*proto*/ +static CYTHON_INLINE int __pyx_f_5numpy_import_array(void); /*proto*/ /* Module declarations from 'scipy.linalg.cython_blas' */ static __pyx_t_5scipy_6linalg_11cython_blas_d (*__pyx_f_5scipy_6linalg_11cython_blas_ddot)(int *, __pyx_t_5scipy_6linalg_11cython_blas_d *, int *, __pyx_t_5scipy_6linalg_11cython_blas_d *, int *); /*proto*/ @@ -1440,6 +2132,8 @@ static PyObject *strided = 0; static PyObject *indirect = 0; static PyObject *contiguous = 0; static PyObject *indirect_contiguous = 0; +static int __pyx_memoryview_thread_locks_used; +static PyThread_type_lock __pyx_memoryview_thread_locks[8]; static void __pyx_f_3GPy_4util_17choleskies_cython_chol_backprop(int, __Pyx_memviewslice, __Pyx_memviewslice); /*proto*/ static struct __pyx_array_obj *__pyx_array_new(PyObject *, Py_ssize_t, char *, char *, char *); /*proto*/ static void *__pyx_align_pointer(void *, size_t); /*proto*/ @@ -1473,8 +2167,10 @@ static void __pyx_memoryview_refcount_objects_in_slice_with_gil(char *, Py_ssize static void __pyx_memoryview_refcount_objects_in_slice(char *, Py_ssize_t *, Py_ssize_t *, int, int); /*proto*/ static void __pyx_memoryview_slice_assign_scalar(__Pyx_memviewslice *, int, size_t, void *, int); /*proto*/ static void __pyx_memoryview__slice_assign_scalar(char *, Py_ssize_t *, Py_ssize_t *, int, size_t, void *); /*proto*/ +static PyObject *__pyx_unpickle_Enum__set_state(struct __pyx_MemviewEnum_obj *, PyObject *); /*proto*/ static __Pyx_TypeInfo __Pyx_TypeInfo_double = { "double", NULL, sizeof(double), { 0 }, 0, 'R', 0, 0 }; #define __Pyx_MODULE_NAME "GPy.util.choleskies_cython" +extern int __pyx_module_is_main_GPy__util__choleskies_cython; int __pyx_module_is_main_GPy__util__choleskies_cython = 0; /* Implementation of 'GPy.util.choleskies_cython' */ @@ -1482,173 +2178,143 @@ static PyObject *__pyx_builtin_range; static PyObject *__pyx_builtin_xrange; static PyObject *__pyx_builtin_ValueError; static PyObject *__pyx_builtin_RuntimeError; +static PyObject *__pyx_builtin_ImportError; static PyObject *__pyx_builtin_MemoryError; static PyObject *__pyx_builtin_enumerate; -static PyObject *__pyx_builtin_Ellipsis; static PyObject *__pyx_builtin_TypeError; +static PyObject *__pyx_builtin_Ellipsis; static PyObject *__pyx_builtin_id; static PyObject *__pyx_builtin_IndexError; -static PyObject *__pyx_pf_3GPy_4util_17choleskies_cython_flat_to_triang(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_flat, int __pyx_v_M); /* proto */ -static PyObject *__pyx_pf_3GPy_4util_17choleskies_cython_2triang_to_flat(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_L); /* proto */ -static PyObject *__pyx_pf_3GPy_4util_17choleskies_cython_4backprop_gradient(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_dL, __Pyx_memviewslice __pyx_v_L); /* proto */ -static PyObject *__pyx_pf_3GPy_4util_17choleskies_cython_6backprop_gradient_par(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_dL, __Pyx_memviewslice __pyx_v_L); /* proto */ -static PyObject *__pyx_pf_3GPy_4util_17choleskies_cython_8backprop_gradient_par_c(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_dL, __Pyx_memviewslice __pyx_v_L); /* proto */ -static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, Py_buffer *__pyx_v_info, int __pyx_v_flags); /* proto */ -static void __pyx_pf_5numpy_7ndarray_2__releasebuffer__(PyArrayObject *__pyx_v_self, Py_buffer *__pyx_v_info); /* proto */ -static int __pyx_array_MemoryView_5array___cinit__(struct __pyx_array_obj *__pyx_v_self, PyObject *__pyx_v_shape, Py_ssize_t __pyx_v_itemsize, PyObject *__pyx_v_format, PyObject *__pyx_v_mode, int __pyx_v_allocate_buffer); /* proto */ -static int __pyx_array_getbuffer_MemoryView_5array_2__getbuffer__(struct __pyx_array_obj *__pyx_v_self, Py_buffer *__pyx_v_info, int __pyx_v_flags); /* proto */ -static void __pyx_array_MemoryView_5array_4__dealloc__(struct __pyx_array_obj *__pyx_v_self); /* proto */ -static PyObject *get_memview_MemoryView_5array_7memview___get__(struct __pyx_array_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_array_MemoryView_5array_6__getattr__(struct __pyx_array_obj *__pyx_v_self, PyObject *__pyx_v_attr); /* proto */ -static PyObject *__pyx_array_MemoryView_5array_8__getitem__(struct __pyx_array_obj *__pyx_v_self, PyObject *__pyx_v_item); /* proto */ -static int __pyx_array_MemoryView_5array_10__setitem__(struct __pyx_array_obj *__pyx_v_self, PyObject *__pyx_v_item, PyObject *__pyx_v_value); /* proto */ -static int __pyx_MemviewEnum_MemoryView_4Enum___init__(struct __pyx_MemviewEnum_obj *__pyx_v_self, PyObject *__pyx_v_name); /* proto */ -static PyObject *__pyx_MemviewEnum_MemoryView_4Enum_2__repr__(struct __pyx_MemviewEnum_obj *__pyx_v_self); /* proto */ -static int __pyx_memoryview_MemoryView_10memoryview___cinit__(struct __pyx_memoryview_obj *__pyx_v_self, PyObject *__pyx_v_obj, int __pyx_v_flags, int __pyx_v_dtype_is_object); /* proto */ -static void __pyx_memoryview_MemoryView_10memoryview_2__dealloc__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_memoryview_MemoryView_10memoryview_4__getitem__(struct __pyx_memoryview_obj *__pyx_v_self, PyObject *__pyx_v_index); /* proto */ -static int __pyx_memoryview_MemoryView_10memoryview_6__setitem__(struct __pyx_memoryview_obj *__pyx_v_self, PyObject *__pyx_v_index, PyObject *__pyx_v_value); /* proto */ -static int __pyx_memoryview_getbuffer_MemoryView_10memoryview_8__getbuffer__(struct __pyx_memoryview_obj *__pyx_v_self, Py_buffer *__pyx_v_info, int __pyx_v_flags); /* proto */ -static PyObject *__pyx_memoryview_transpose_MemoryView_10memoryview_1T___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_memoryview__get__base_MemoryView_10memoryview_4base___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_memoryview_get_shape_MemoryView_10memoryview_5shape___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_memoryview_get_strides_MemoryView_10memoryview_7strides___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_memoryview_get_suboffsets_MemoryView_10memoryview_10suboffsets___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_memoryview_get_ndim_MemoryView_10memoryview_4ndim___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_memoryview_get_itemsize_MemoryView_10memoryview_8itemsize___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_memoryview_get_nbytes_MemoryView_10memoryview_6nbytes___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_memoryview_get_size_MemoryView_10memoryview_4size___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static Py_ssize_t __pyx_memoryview_MemoryView_10memoryview_10__len__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_memoryview_MemoryView_10memoryview_12__repr__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_memoryview_MemoryView_10memoryview_14__str__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_memoryview_MemoryView_10memoryview_16is_c_contig(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_memoryview_MemoryView_10memoryview_18is_f_contig(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_memoryview_MemoryView_10memoryview_20copy(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_memoryview_MemoryView_10memoryview_22copy_fortran(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ -static void __pyx_memoryviewslice_MemoryView_16_memoryviewslice___dealloc__(struct __pyx_memoryviewslice_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_memoryviewslice__get__base_MemoryView_16_memoryviewslice_4base___get__(struct __pyx_memoryviewslice_obj *__pyx_v_self); /* proto */ -static PyObject *__pyx_tp_new_array(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ -static PyObject *__pyx_tp_new_Enum(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ -static PyObject *__pyx_tp_new_memoryview(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ -static PyObject *__pyx_tp_new__memoryviewslice(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ -static char __pyx_k_B[] = "B"; -static char __pyx_k_D[] = "D"; -static char __pyx_k_H[] = "H"; -static char __pyx_k_I[] = "I"; -static char __pyx_k_L[] = "L"; -static char __pyx_k_M[] = "M"; -static char __pyx_k_N[] = "N"; -static char __pyx_k_O[] = "O"; -static char __pyx_k_Q[] = "Q"; -static char __pyx_k_b[] = "b"; -static char __pyx_k_c[] = "c"; -static char __pyx_k_d[] = "d"; -static char __pyx_k_f[] = "f"; -static char __pyx_k_g[] = "g"; -static char __pyx_k_h[] = "h"; -static char __pyx_k_i[] = "i"; -static char __pyx_k_j[] = "j"; -static char __pyx_k_k[] = "k"; -static char __pyx_k_l[] = "l"; -static char __pyx_k_m[] = "m"; -static char __pyx_k_q[] = "q"; -static char __pyx_k_u[] = "u"; -static char __pyx_k_Zd[] = "Zd"; -static char __pyx_k_Zf[] = "Zf"; -static char __pyx_k_Zg[] = "Zg"; -static char __pyx_k_dL[] = "dL"; -static char __pyx_k_id[] = "id"; -static char __pyx_k_mm[] = "mm"; -static char __pyx_k_np[] = "np"; -static char __pyx_k_obj[] = "obj"; -static char __pyx_k_ret[] = "ret"; -static char __pyx_k_base[] = "base"; -static char __pyx_k_flat[] = "flat"; -static char __pyx_k_main[] = "__main__"; -static char __pyx_k_mode[] = "mode"; -static char __pyx_k_name[] = "name"; -static char __pyx_k_ndim[] = "ndim"; -static char __pyx_k_pack[] = "pack"; -static char __pyx_k_size[] = "size"; -static char __pyx_k_step[] = "step"; -static char __pyx_k_stop[] = "stop"; -static char __pyx_k_test[] = "__test__"; -static char __pyx_k_tril[] = "tril"; -static char __pyx_k_class[] = "__class__"; -static char __pyx_k_count[] = "count"; -static char __pyx_k_dL_dK[] = "dL_dK"; -static char __pyx_k_empty[] = "empty"; -static char __pyx_k_error[] = "error"; -static char __pyx_k_flags[] = "flags"; -static char __pyx_k_numpy[] = "numpy"; -static char __pyx_k_range[] = "range"; -static char __pyx_k_shape[] = "shape"; -static char __pyx_k_start[] = "start"; -static char __pyx_k_zeros[] = "zeros"; -static char __pyx_k_L_cont[] = "L_cont"; -static char __pyx_k_format[] = "format"; -static char __pyx_k_import[] = "__import__"; -static char __pyx_k_name_2[] = "__name__"; -static char __pyx_k_struct[] = "struct"; -static char __pyx_k_unpack[] = "unpack"; -static char __pyx_k_xrange[] = "xrange"; -static char __pyx_k_asarray[] = "asarray"; -static char __pyx_k_fortran[] = "fortran"; -static char __pyx_k_memview[] = "memview"; -static char __pyx_k_Ellipsis[] = "Ellipsis"; -static char __pyx_k_itemsize[] = "itemsize"; -static char __pyx_k_TypeError[] = "TypeError"; -static char __pyx_k_enumerate[] = "enumerate"; -static char __pyx_k_IndexError[] = "IndexError"; -static char __pyx_k_ValueError[] = "ValueError"; -static char __pyx_k_pyx_vtable[] = "__pyx_vtable__"; -static char __pyx_k_MemoryError[] = "MemoryError"; -static char __pyx_k_RuntimeError[] = "RuntimeError"; -static char __pyx_k_pyx_getbuffer[] = "__pyx_getbuffer"; -static char __pyx_k_flat_to_triang[] = "flat_to_triang"; -static char __pyx_k_triang_to_flat[] = "triang_to_flat"; -static char __pyx_k_allocate_buffer[] = "allocate_buffer"; -static char __pyx_k_dtype_is_object[] = "dtype_is_object"; -static char __pyx_k_ascontiguousarray[] = "ascontiguousarray"; -static char __pyx_k_backprop_gradient[] = "backprop_gradient"; -static char __pyx_k_strided_and_direct[] = ""; -static char __pyx_k_strided_and_indirect[] = ""; -static char __pyx_k_backprop_gradient_par[] = "backprop_gradient_par"; -static char __pyx_k_contiguous_and_direct[] = ""; -static char __pyx_k_MemoryView_of_r_object[] = ""; -static char __pyx_k_MemoryView_of_r_at_0x_x[] = ""; -static char __pyx_k_backprop_gradient_par_c[] = "backprop_gradient_par_c"; -static char __pyx_k_contiguous_and_indirect[] = ""; -static char __pyx_k_Cannot_index_with_type_s[] = "Cannot index with type '%s'"; -static char __pyx_k_getbuffer_obj_view_flags[] = "getbuffer(obj, view, flags)"; -static char __pyx_k_Dimension_d_is_not_direct[] = "Dimension %d is not direct"; -static char __pyx_k_Invalid_shape_in_axis_d_d[] = "Invalid shape in axis %d: %d."; -static char __pyx_k_GPy_util_choleskies_cython[] = "GPy.util.choleskies_cython"; -static char __pyx_k_Index_out_of_bounds_axis_d[] = "Index out of bounds (axis %d)"; -static char __pyx_k_Step_may_not_be_zero_axis_d[] = "Step may not be zero (axis %d)"; -static char __pyx_k_itemsize_0_for_cython_array[] = "itemsize <= 0 for cython.array"; -static char __pyx_k_ndarray_is_not_C_contiguous[] = "ndarray is not C contiguous"; -static char __pyx_k_unable_to_allocate_array_data[] = "unable to allocate array data."; -static char __pyx_k_strided_and_direct_or_indirect[] = ""; -static char __pyx_k_Users_james_work_GPy_GPy_util_c[] = "/Users/james/work/GPy/GPy/util/choleskies_cython.pyx"; -static char __pyx_k_unknown_dtype_code_in_numpy_pxd[] = "unknown dtype code in numpy.pxd (%d)"; -static char __pyx_k_All_dimensions_preceding_dimensi[] = "All dimensions preceding dimension %d must be indexed and not sliced"; -static char __pyx_k_Buffer_view_does_not_expose_stri[] = "Buffer view does not expose strides"; -static char __pyx_k_Can_only_create_a_buffer_that_is[] = "Can only create a buffer that is contiguous in memory."; -static char __pyx_k_Cannot_transpose_memoryview_with[] = "Cannot transpose memoryview with indirect dimensions"; -static char __pyx_k_Empty_shape_tuple_for_cython_arr[] = "Empty shape tuple for cython.array"; -static char __pyx_k_Format_string_allocated_too_shor[] = "Format string allocated too short, see comment in numpy.pxd"; -static char __pyx_k_Indirect_dimensions_not_supporte[] = "Indirect dimensions not supported"; -static char __pyx_k_Invalid_mode_expected_c_or_fortr[] = "Invalid mode, expected 'c' or 'fortran', got %s"; -static char __pyx_k_Non_native_byte_order_not_suppor[] = "Non-native byte order not supported"; -static char __pyx_k_Out_of_bounds_on_buffer_access_a[] = "Out of bounds on buffer access (axis %d)"; -static char __pyx_k_Unable_to_convert_item_to_object[] = "Unable to convert item to object"; -static char __pyx_k_got_differing_extents_in_dimensi[] = "got differing extents in dimension %d (got %d and %d)"; -static char __pyx_k_ndarray_is_not_Fortran_contiguou[] = "ndarray is not Fortran contiguous"; -static char __pyx_k_unable_to_allocate_shape_and_str[] = "unable to allocate shape and strides."; -static char __pyx_k_Format_string_allocated_too_shor_2[] = "Format string allocated too short."; +static const char __pyx_k_D[] = "D"; +static const char __pyx_k_L[] = "L"; +static const char __pyx_k_M[] = "M"; +static const char __pyx_k_N[] = "N"; +static const char __pyx_k_O[] = "O"; +static const char __pyx_k_c[] = "c"; +static const char __pyx_k_d[] = "d"; +static const char __pyx_k_i[] = "i"; +static const char __pyx_k_j[] = "j"; +static const char __pyx_k_k[] = "k"; +static const char __pyx_k_m[] = "m"; +static const char __pyx_k_dL[] = "dL"; +static const char __pyx_k_id[] = "id"; +static const char __pyx_k_mm[] = "mm"; +static const char __pyx_k_np[] = "np"; +static const char __pyx_k_new[] = "__new__"; +static const char __pyx_k_obj[] = "obj"; +static const char __pyx_k_ret[] = "ret"; +static const char __pyx_k_base[] = "base"; +static const char __pyx_k_dict[] = "__dict__"; +static const char __pyx_k_flat[] = "flat"; +static const char __pyx_k_main[] = "__main__"; +static const char __pyx_k_mode[] = "mode"; +static const char __pyx_k_name[] = "name"; +static const char __pyx_k_ndim[] = "ndim"; +static const char __pyx_k_pack[] = "pack"; +static const char __pyx_k_size[] = "size"; +static const char __pyx_k_step[] = "step"; +static const char __pyx_k_stop[] = "stop"; +static const char __pyx_k_test[] = "__test__"; +static const char __pyx_k_tril[] = "tril"; +static const char __pyx_k_ASCII[] = "ASCII"; +static const char __pyx_k_class[] = "__class__"; +static const char __pyx_k_count[] = "count"; +static const char __pyx_k_dL_dK[] = "dL_dK"; +static const char __pyx_k_empty[] = "empty"; +static const char __pyx_k_error[] = "error"; +static const char __pyx_k_flags[] = "flags"; +static const char __pyx_k_numpy[] = "numpy"; +static const char __pyx_k_range[] = "range"; +static const char __pyx_k_shape[] = "shape"; +static const char __pyx_k_start[] = "start"; +static const char __pyx_k_zeros[] = "zeros"; +static const char __pyx_k_L_cont[] = "L_cont"; +static const char __pyx_k_encode[] = "encode"; +static const char __pyx_k_format[] = "format"; +static const char __pyx_k_import[] = "__import__"; +static const char __pyx_k_name_2[] = "__name__"; +static const char __pyx_k_pickle[] = "pickle"; +static const char __pyx_k_reduce[] = "__reduce__"; +static const char __pyx_k_struct[] = "struct"; +static const char __pyx_k_unpack[] = "unpack"; +static const char __pyx_k_update[] = "update"; +static const char __pyx_k_xrange[] = "xrange"; +static const char __pyx_k_asarray[] = "asarray"; +static const char __pyx_k_fortran[] = "fortran"; +static const char __pyx_k_memview[] = "memview"; +static const char __pyx_k_Ellipsis[] = "Ellipsis"; +static const char __pyx_k_getstate[] = "__getstate__"; +static const char __pyx_k_itemsize[] = "itemsize"; +static const char __pyx_k_pyx_type[] = "__pyx_type"; +static const char __pyx_k_setstate[] = "__setstate__"; +static const char __pyx_k_TypeError[] = "TypeError"; +static const char __pyx_k_enumerate[] = "enumerate"; +static const char __pyx_k_pyx_state[] = "__pyx_state"; +static const char __pyx_k_reduce_ex[] = "__reduce_ex__"; +static const char __pyx_k_IndexError[] = "IndexError"; +static const char __pyx_k_ValueError[] = "ValueError"; +static const char __pyx_k_pyx_result[] = "__pyx_result"; +static const char __pyx_k_pyx_vtable[] = "__pyx_vtable__"; +static const char __pyx_k_ImportError[] = "ImportError"; +static const char __pyx_k_MemoryError[] = "MemoryError"; +static const char __pyx_k_PickleError[] = "PickleError"; +static const char __pyx_k_RuntimeError[] = "RuntimeError"; +static const char __pyx_k_pyx_checksum[] = "__pyx_checksum"; +static const char __pyx_k_stringsource[] = "stringsource"; +static const char __pyx_k_pyx_getbuffer[] = "__pyx_getbuffer"; +static const char __pyx_k_reduce_cython[] = "__reduce_cython__"; +static const char __pyx_k_flat_to_triang[] = "flat_to_triang"; +static const char __pyx_k_triang_to_flat[] = "triang_to_flat"; +static const char __pyx_k_View_MemoryView[] = "View.MemoryView"; +static const char __pyx_k_allocate_buffer[] = "allocate_buffer"; +static const char __pyx_k_dtype_is_object[] = "dtype_is_object"; +static const char __pyx_k_pyx_PickleError[] = "__pyx_PickleError"; +static const char __pyx_k_setstate_cython[] = "__setstate_cython__"; +static const char __pyx_k_ascontiguousarray[] = "ascontiguousarray"; +static const char __pyx_k_backprop_gradient[] = "backprop_gradient"; +static const char __pyx_k_pyx_unpickle_Enum[] = "__pyx_unpickle_Enum"; +static const char __pyx_k_cline_in_traceback[] = "cline_in_traceback"; +static const char __pyx_k_strided_and_direct[] = ""; +static const char __pyx_k_strided_and_indirect[] = ""; +static const char __pyx_k_backprop_gradient_par[] = "backprop_gradient_par"; +static const char __pyx_k_contiguous_and_direct[] = ""; +static const char __pyx_k_MemoryView_of_r_object[] = ""; +static const char __pyx_k_MemoryView_of_r_at_0x_x[] = ""; +static const char __pyx_k_backprop_gradient_par_c[] = "backprop_gradient_par_c"; +static const char __pyx_k_contiguous_and_indirect[] = ""; +static const char __pyx_k_Cannot_index_with_type_s[] = "Cannot index with type '%s'"; +static const char __pyx_k_Invalid_shape_in_axis_d_d[] = "Invalid shape in axis %d: %d."; +static const char __pyx_k_GPy_util_choleskies_cython[] = "GPy.util.choleskies_cython"; +static const char __pyx_k_itemsize_0_for_cython_array[] = "itemsize <= 0 for cython.array"; +static const char __pyx_k_ndarray_is_not_C_contiguous[] = "ndarray is not C contiguous"; +static const char __pyx_k_unable_to_allocate_array_data[] = "unable to allocate array data."; +static const char __pyx_k_GPy_util_choleskies_cython_pyx[] = "GPy/util/choleskies_cython.pyx"; +static const char __pyx_k_strided_and_direct_or_indirect[] = ""; +static const char __pyx_k_numpy_core_multiarray_failed_to[] = "numpy.core.multiarray failed to import"; +static const char __pyx_k_unknown_dtype_code_in_numpy_pxd[] = "unknown dtype code in numpy.pxd (%d)"; +static const char __pyx_k_Buffer_view_does_not_expose_stri[] = "Buffer view does not expose strides"; +static const char __pyx_k_Can_only_create_a_buffer_that_is[] = "Can only create a buffer that is contiguous in memory."; +static const char __pyx_k_Cannot_assign_to_read_only_memor[] = "Cannot assign to read-only memoryview"; +static const char __pyx_k_Cannot_create_writable_memory_vi[] = "Cannot create writable memory view from read-only memoryview"; +static const char __pyx_k_Empty_shape_tuple_for_cython_arr[] = "Empty shape tuple for cython.array"; +static const char __pyx_k_Format_string_allocated_too_shor[] = "Format string allocated too short, see comment in numpy.pxd"; +static const char __pyx_k_Incompatible_checksums_s_vs_0xb0[] = "Incompatible checksums (%s vs 0xb068931 = (name))"; +static const char __pyx_k_Indirect_dimensions_not_supporte[] = "Indirect dimensions not supported"; +static const char __pyx_k_Invalid_mode_expected_c_or_fortr[] = "Invalid mode, expected 'c' or 'fortran', got %s"; +static const char __pyx_k_Non_native_byte_order_not_suppor[] = "Non-native byte order not supported"; +static const char __pyx_k_Out_of_bounds_on_buffer_access_a[] = "Out of bounds on buffer access (axis %d)"; +static const char __pyx_k_Unable_to_convert_item_to_object[] = "Unable to convert item to object"; +static const char __pyx_k_got_differing_extents_in_dimensi[] = "got differing extents in dimension %d (got %d and %d)"; +static const char __pyx_k_ndarray_is_not_Fortran_contiguou[] = "ndarray is not Fortran contiguous"; +static const char __pyx_k_no_default___reduce___due_to_non[] = "no default __reduce__ due to non-trivial __cinit__"; +static const char __pyx_k_numpy_core_umath_failed_to_impor[] = "numpy.core.umath failed to import"; +static const char __pyx_k_unable_to_allocate_shape_and_str[] = "unable to allocate shape and strides."; +static const char __pyx_k_Format_string_allocated_too_shor_2[] = "Format string allocated too short."; +static PyObject *__pyx_n_s_ASCII; static PyObject *__pyx_kp_s_Buffer_view_does_not_expose_stri; static PyObject *__pyx_kp_s_Can_only_create_a_buffer_that_is; +static PyObject *__pyx_kp_s_Cannot_assign_to_read_only_memor; +static PyObject *__pyx_kp_s_Cannot_create_writable_memory_vi; static PyObject *__pyx_kp_s_Cannot_index_with_type_s; static PyObject *__pyx_n_s_D; static PyObject *__pyx_n_s_Ellipsis; @@ -1656,6 +2322,9 @@ static PyObject *__pyx_kp_s_Empty_shape_tuple_for_cython_arr; static PyObject *__pyx_kp_u_Format_string_allocated_too_shor; static PyObject *__pyx_kp_u_Format_string_allocated_too_shor_2; static PyObject *__pyx_n_s_GPy_util_choleskies_cython; +static PyObject *__pyx_kp_s_GPy_util_choleskies_cython_pyx; +static PyObject *__pyx_n_s_ImportError; +static PyObject *__pyx_kp_s_Incompatible_checksums_s_vs_0xb0; static PyObject *__pyx_n_s_IndexError; static PyObject *__pyx_kp_s_Indirect_dimensions_not_supporte; static PyObject *__pyx_kp_s_Invalid_mode_expected_c_or_fortr; @@ -1670,11 +2339,12 @@ static PyObject *__pyx_n_s_N; static PyObject *__pyx_kp_u_Non_native_byte_order_not_suppor; static PyObject *__pyx_n_b_O; static PyObject *__pyx_kp_s_Out_of_bounds_on_buffer_access_a; +static PyObject *__pyx_n_s_PickleError; static PyObject *__pyx_n_s_RuntimeError; static PyObject *__pyx_n_s_TypeError; static PyObject *__pyx_kp_s_Unable_to_convert_item_to_object; -static PyObject *__pyx_kp_s_Users_james_work_GPy_GPy_util_c; static PyObject *__pyx_n_s_ValueError; +static PyObject *__pyx_n_s_View_MemoryView; static PyObject *__pyx_n_s_allocate_buffer; static PyObject *__pyx_n_s_asarray; static PyObject *__pyx_n_s_ascontiguousarray; @@ -1685,14 +2355,17 @@ static PyObject *__pyx_n_s_base; static PyObject *__pyx_n_s_c; static PyObject *__pyx_n_u_c; static PyObject *__pyx_n_s_class; +static PyObject *__pyx_n_s_cline_in_traceback; static PyObject *__pyx_kp_s_contiguous_and_direct; static PyObject *__pyx_kp_s_contiguous_and_indirect; static PyObject *__pyx_n_s_count; static PyObject *__pyx_n_s_d; static PyObject *__pyx_n_s_dL; static PyObject *__pyx_n_s_dL_dK; +static PyObject *__pyx_n_s_dict; static PyObject *__pyx_n_s_dtype_is_object; static PyObject *__pyx_n_s_empty; +static PyObject *__pyx_n_s_encode; static PyObject *__pyx_n_s_enumerate; static PyObject *__pyx_n_s_error; static PyObject *__pyx_n_s_flags; @@ -1701,6 +2374,7 @@ static PyObject *__pyx_n_s_flat_to_triang; static PyObject *__pyx_n_s_format; static PyObject *__pyx_n_s_fortran; static PyObject *__pyx_n_u_fortran; +static PyObject *__pyx_n_s_getstate; static PyObject *__pyx_kp_s_got_differing_extents_in_dimensi; static PyObject *__pyx_n_s_i; static PyObject *__pyx_n_s_id; @@ -1719,14 +2393,30 @@ static PyObject *__pyx_n_s_name_2; static PyObject *__pyx_kp_u_ndarray_is_not_C_contiguous; static PyObject *__pyx_kp_u_ndarray_is_not_Fortran_contiguou; static PyObject *__pyx_n_s_ndim; +static PyObject *__pyx_n_s_new; +static PyObject *__pyx_kp_s_no_default___reduce___due_to_non; static PyObject *__pyx_n_s_np; static PyObject *__pyx_n_s_numpy; +static PyObject *__pyx_kp_s_numpy_core_multiarray_failed_to; +static PyObject *__pyx_kp_s_numpy_core_umath_failed_to_impor; static PyObject *__pyx_n_s_obj; static PyObject *__pyx_n_s_pack; +static PyObject *__pyx_n_s_pickle; +static PyObject *__pyx_n_s_pyx_PickleError; +static PyObject *__pyx_n_s_pyx_checksum; static PyObject *__pyx_n_s_pyx_getbuffer; +static PyObject *__pyx_n_s_pyx_result; +static PyObject *__pyx_n_s_pyx_state; +static PyObject *__pyx_n_s_pyx_type; +static PyObject *__pyx_n_s_pyx_unpickle_Enum; static PyObject *__pyx_n_s_pyx_vtable; static PyObject *__pyx_n_s_range; +static PyObject *__pyx_n_s_reduce; +static PyObject *__pyx_n_s_reduce_cython; +static PyObject *__pyx_n_s_reduce_ex; static PyObject *__pyx_n_s_ret; +static PyObject *__pyx_n_s_setstate; +static PyObject *__pyx_n_s_setstate_cython; static PyObject *__pyx_n_s_shape; static PyObject *__pyx_n_s_size; static PyObject *__pyx_n_s_start; @@ -1735,6 +2425,7 @@ static PyObject *__pyx_n_s_stop; static PyObject *__pyx_kp_s_strided_and_direct; static PyObject *__pyx_kp_s_strided_and_direct_or_indirect; static PyObject *__pyx_kp_s_strided_and_indirect; +static PyObject *__pyx_kp_s_stringsource; static PyObject *__pyx_n_s_struct; static PyObject *__pyx_n_s_test; static PyObject *__pyx_n_s_triang_to_flat; @@ -1743,10 +2434,65 @@ static PyObject *__pyx_kp_s_unable_to_allocate_array_data; static PyObject *__pyx_kp_s_unable_to_allocate_shape_and_str; static PyObject *__pyx_kp_u_unknown_dtype_code_in_numpy_pxd; static PyObject *__pyx_n_s_unpack; +static PyObject *__pyx_n_s_update; static PyObject *__pyx_n_s_xrange; static PyObject *__pyx_n_s_zeros; +static PyObject *__pyx_pf_3GPy_4util_17choleskies_cython_flat_to_triang(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_flat, int __pyx_v_M); /* proto */ +static PyObject *__pyx_pf_3GPy_4util_17choleskies_cython_2triang_to_flat(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_L); /* proto */ +static PyObject *__pyx_pf_3GPy_4util_17choleskies_cython_4backprop_gradient(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_dL, __Pyx_memviewslice __pyx_v_L); /* proto */ +static PyObject *__pyx_pf_3GPy_4util_17choleskies_cython_6backprop_gradient_par(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_dL, __Pyx_memviewslice __pyx_v_L); /* proto */ +static PyObject *__pyx_pf_3GPy_4util_17choleskies_cython_8backprop_gradient_par_c(CYTHON_UNUSED PyObject *__pyx_self, __Pyx_memviewslice __pyx_v_dL, __Pyx_memviewslice __pyx_v_L); /* proto */ +static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, Py_buffer *__pyx_v_info, int __pyx_v_flags); /* proto */ +static void __pyx_pf_5numpy_7ndarray_2__releasebuffer__(PyArrayObject *__pyx_v_self, Py_buffer *__pyx_v_info); /* proto */ +static int __pyx_array___pyx_pf_15View_dot_MemoryView_5array___cinit__(struct __pyx_array_obj *__pyx_v_self, PyObject *__pyx_v_shape, Py_ssize_t __pyx_v_itemsize, PyObject *__pyx_v_format, PyObject *__pyx_v_mode, int __pyx_v_allocate_buffer); /* proto */ +static int __pyx_array___pyx_pf_15View_dot_MemoryView_5array_2__getbuffer__(struct __pyx_array_obj *__pyx_v_self, Py_buffer *__pyx_v_info, int __pyx_v_flags); /* proto */ +static void __pyx_array___pyx_pf_15View_dot_MemoryView_5array_4__dealloc__(struct __pyx_array_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf_15View_dot_MemoryView_5array_7memview___get__(struct __pyx_array_obj *__pyx_v_self); /* proto */ +static Py_ssize_t __pyx_array___pyx_pf_15View_dot_MemoryView_5array_6__len__(struct __pyx_array_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_array___pyx_pf_15View_dot_MemoryView_5array_8__getattr__(struct __pyx_array_obj *__pyx_v_self, PyObject *__pyx_v_attr); /* proto */ +static PyObject *__pyx_array___pyx_pf_15View_dot_MemoryView_5array_10__getitem__(struct __pyx_array_obj *__pyx_v_self, PyObject *__pyx_v_item); /* proto */ +static int __pyx_array___pyx_pf_15View_dot_MemoryView_5array_12__setitem__(struct __pyx_array_obj *__pyx_v_self, PyObject *__pyx_v_item, PyObject *__pyx_v_value); /* proto */ +static PyObject *__pyx_pf___pyx_array___reduce_cython__(CYTHON_UNUSED struct __pyx_array_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf___pyx_array_2__setstate_cython__(CYTHON_UNUSED struct __pyx_array_obj *__pyx_v_self, CYTHON_UNUSED PyObject *__pyx_v___pyx_state); /* proto */ +static int __pyx_MemviewEnum___pyx_pf_15View_dot_MemoryView_4Enum___init__(struct __pyx_MemviewEnum_obj *__pyx_v_self, PyObject *__pyx_v_name); /* proto */ +static PyObject *__pyx_MemviewEnum___pyx_pf_15View_dot_MemoryView_4Enum_2__repr__(struct __pyx_MemviewEnum_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf___pyx_MemviewEnum___reduce_cython__(struct __pyx_MemviewEnum_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf___pyx_MemviewEnum_2__setstate_cython__(struct __pyx_MemviewEnum_obj *__pyx_v_self, PyObject *__pyx_v___pyx_state); /* proto */ +static int __pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview___cinit__(struct __pyx_memoryview_obj *__pyx_v_self, PyObject *__pyx_v_obj, int __pyx_v_flags, int __pyx_v_dtype_is_object); /* proto */ +static void __pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview_2__dealloc__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview_4__getitem__(struct __pyx_memoryview_obj *__pyx_v_self, PyObject *__pyx_v_index); /* proto */ +static int __pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview_6__setitem__(struct __pyx_memoryview_obj *__pyx_v_self, PyObject *__pyx_v_index, PyObject *__pyx_v_value); /* proto */ +static int __pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview_8__getbuffer__(struct __pyx_memoryview_obj *__pyx_v_self, Py_buffer *__pyx_v_info, int __pyx_v_flags); /* proto */ +static PyObject *__pyx_pf_15View_dot_MemoryView_10memoryview_1T___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf_15View_dot_MemoryView_10memoryview_4base___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf_15View_dot_MemoryView_10memoryview_5shape___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf_15View_dot_MemoryView_10memoryview_7strides___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf_15View_dot_MemoryView_10memoryview_10suboffsets___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf_15View_dot_MemoryView_10memoryview_4ndim___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf_15View_dot_MemoryView_10memoryview_8itemsize___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf_15View_dot_MemoryView_10memoryview_6nbytes___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf_15View_dot_MemoryView_10memoryview_4size___get__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static Py_ssize_t __pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview_10__len__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview_12__repr__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview_14__str__(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview_16is_c_contig(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview_18is_f_contig(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview_20copy(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview_22copy_fortran(struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf___pyx_memoryview___reduce_cython__(CYTHON_UNUSED struct __pyx_memoryview_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf___pyx_memoryview_2__setstate_cython__(CYTHON_UNUSED struct __pyx_memoryview_obj *__pyx_v_self, CYTHON_UNUSED PyObject *__pyx_v___pyx_state); /* proto */ +static void __pyx_memoryviewslice___pyx_pf_15View_dot_MemoryView_16_memoryviewslice___dealloc__(struct __pyx_memoryviewslice_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf_15View_dot_MemoryView_16_memoryviewslice_4base___get__(struct __pyx_memoryviewslice_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf___pyx_memoryviewslice___reduce_cython__(CYTHON_UNUSED struct __pyx_memoryviewslice_obj *__pyx_v_self); /* proto */ +static PyObject *__pyx_pf___pyx_memoryviewslice_2__setstate_cython__(CYTHON_UNUSED struct __pyx_memoryviewslice_obj *__pyx_v_self, CYTHON_UNUSED PyObject *__pyx_v___pyx_state); /* proto */ +static PyObject *__pyx_pf_15View_dot_MemoryView___pyx_unpickle_Enum(CYTHON_UNUSED PyObject *__pyx_self, PyObject *__pyx_v___pyx_type, long __pyx_v___pyx_checksum, PyObject *__pyx_v___pyx_state); /* proto */ +static PyObject *__pyx_tp_new_array(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ +static PyObject *__pyx_tp_new_Enum(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ +static PyObject *__pyx_tp_new_memoryview(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ +static PyObject *__pyx_tp_new__memoryviewslice(PyTypeObject *t, PyObject *a, PyObject *k); /*proto*/ static PyObject *__pyx_int_0; static PyObject *__pyx_int_1; +static PyObject *__pyx_int_184977713; static PyObject *__pyx_int_neg_1; static PyObject *__pyx_tuple_; static PyObject *__pyx_tuple__2; @@ -1757,32 +2503,43 @@ static PyObject *__pyx_tuple__6; static PyObject *__pyx_tuple__7; static PyObject *__pyx_tuple__8; static PyObject *__pyx_tuple__9; -static PyObject *__pyx_slice__14; -static PyObject *__pyx_slice__15; -static PyObject *__pyx_slice__16; +static PyObject *__pyx_slice__22; static PyObject *__pyx_tuple__10; static PyObject *__pyx_tuple__11; static PyObject *__pyx_tuple__12; static PyObject *__pyx_tuple__13; +static PyObject *__pyx_tuple__14; +static PyObject *__pyx_tuple__15; +static PyObject *__pyx_tuple__16; static PyObject *__pyx_tuple__17; static PyObject *__pyx_tuple__18; +static PyObject *__pyx_tuple__19; static PyObject *__pyx_tuple__20; -static PyObject *__pyx_tuple__22; +static PyObject *__pyx_tuple__21; +static PyObject *__pyx_tuple__23; static PyObject *__pyx_tuple__24; +static PyObject *__pyx_tuple__25; static PyObject *__pyx_tuple__26; static PyObject *__pyx_tuple__28; -static PyObject *__pyx_tuple__29; static PyObject *__pyx_tuple__30; -static PyObject *__pyx_tuple__31; static PyObject *__pyx_tuple__32; -static PyObject *__pyx_codeobj__19; -static PyObject *__pyx_codeobj__21; -static PyObject *__pyx_codeobj__23; -static PyObject *__pyx_codeobj__25; +static PyObject *__pyx_tuple__34; +static PyObject *__pyx_tuple__36; +static PyObject *__pyx_tuple__37; +static PyObject *__pyx_tuple__38; +static PyObject *__pyx_tuple__39; +static PyObject *__pyx_tuple__40; +static PyObject *__pyx_tuple__41; static PyObject *__pyx_codeobj__27; +static PyObject *__pyx_codeobj__29; +static PyObject *__pyx_codeobj__31; +static PyObject *__pyx_codeobj__33; +static PyObject *__pyx_codeobj__35; +static PyObject *__pyx_codeobj__42; +/* Late includes */ -/* "GPy/util/choleskies_cython.pyx":12 - * cimport scipy.linalg.cython_blas as cblas +/* "GPy/util/choleskies_cython.pyx":14 + * np.import_array() * * def flat_to_triang(double[:, :] flat, int M): # <<<<<<<<<<<<<< * """take a matrix N x D and return a D X M x M array where @@ -1792,13 +2549,10 @@ static PyObject *__pyx_codeobj__27; /* Python wrapper */ static PyObject *__pyx_pw_3GPy_4util_17choleskies_cython_1flat_to_triang(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds); /*proto*/ static char __pyx_doc_3GPy_4util_17choleskies_cython_flat_to_triang[] = "take a matrix N x D and return a D X M x M array where\n\n N = M(M+1)/2\n\n the lower triangluar portion of the d'th slice of the result is filled by the d'th column of flat.\n "; -static PyMethodDef __pyx_mdef_3GPy_4util_17choleskies_cython_1flat_to_triang = {"flat_to_triang", (PyCFunction)__pyx_pw_3GPy_4util_17choleskies_cython_1flat_to_triang, METH_VARARGS|METH_KEYWORDS, __pyx_doc_3GPy_4util_17choleskies_cython_flat_to_triang}; +static PyMethodDef __pyx_mdef_3GPy_4util_17choleskies_cython_1flat_to_triang = {"flat_to_triang", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_4util_17choleskies_cython_1flat_to_triang, METH_VARARGS|METH_KEYWORDS, __pyx_doc_3GPy_4util_17choleskies_cython_flat_to_triang}; static PyObject *__pyx_pw_3GPy_4util_17choleskies_cython_1flat_to_triang(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds) { __Pyx_memviewslice __pyx_v_flat = { 0, 0, { 0 }, { 0 }, { 0 } }; int __pyx_v_M; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; PyObject *__pyx_r = 0; __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("flat_to_triang (wrapper)", 0); @@ -1810,23 +2564,26 @@ static PyObject *__pyx_pw_3GPy_4util_17choleskies_cython_1flat_to_triang(PyObjec const Py_ssize_t pos_args = PyTuple_GET_SIZE(__pyx_args); switch (pos_args) { case 2: values[1] = PyTuple_GET_ITEM(__pyx_args, 1); + CYTHON_FALLTHROUGH; case 1: values[0] = PyTuple_GET_ITEM(__pyx_args, 0); + CYTHON_FALLTHROUGH; case 0: break; default: goto __pyx_L5_argtuple_error; } kw_args = PyDict_Size(__pyx_kwds); switch (pos_args) { case 0: - if (likely((values[0] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_flat)) != 0)) kw_args--; + if (likely((values[0] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_flat)) != 0)) kw_args--; else goto __pyx_L5_argtuple_error; + CYTHON_FALLTHROUGH; case 1: - if (likely((values[1] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_M)) != 0)) kw_args--; + if (likely((values[1] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_M)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("flat_to_triang", 1, 2, 2, 1); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 12; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("flat_to_triang", 1, 2, 2, 1); __PYX_ERR(0, 14, __pyx_L3_error) } } if (unlikely(kw_args > 0)) { - if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "flat_to_triang") < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 12; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "flat_to_triang") < 0)) __PYX_ERR(0, 14, __pyx_L3_error) } } else if (PyTuple_GET_SIZE(__pyx_args) != 2) { goto __pyx_L5_argtuple_error; @@ -1834,12 +2591,12 @@ static PyObject *__pyx_pw_3GPy_4util_17choleskies_cython_1flat_to_triang(PyObjec values[0] = PyTuple_GET_ITEM(__pyx_args, 0); values[1] = PyTuple_GET_ITEM(__pyx_args, 1); } - __pyx_v_flat = __Pyx_PyObject_to_MemoryviewSlice_dsds_double(values[0]); 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+ __pyx_t_19 = __pyx_v_i; + __pyx_t_20 = __pyx_v_j; + if (__pyx_t_19 < 0) __pyx_t_19 += __pyx_v_dL_dK.shape[0]; + if (__pyx_t_20 < 0) __pyx_t_20 += __pyx_v_dL_dK.shape[1]; + __pyx_t_21 = __pyx_v_i; + __pyx_t_22 = __pyx_v_k; + if (__pyx_t_21 < 0) __pyx_t_21 += __pyx_v_L.shape[0]; + if (__pyx_t_22 < 0) __pyx_t_22 += __pyx_v_L.shape[1]; + __pyx_t_23 = __pyx_v_j; + __pyx_t_24 = __pyx_v_k; + if (__pyx_t_23 < 0) __pyx_t_23 += __pyx_v_dL_dK.shape[0]; + if (__pyx_t_24 < 0) __pyx_t_24 += __pyx_v_dL_dK.shape[1]; + *((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL_dK.data + __pyx_t_23 * __pyx_v_dL_dK.strides[0]) )) + __pyx_t_24)) )) -= ((*((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL_dK.data + __pyx_t_19 * __pyx_v_dL_dK.strides[0]) )) + __pyx_t_20)) ))) * (*((double *) ( /* dim=1 */ (( /* dim=0 */ (__pyx_v_L.data + __pyx_t_21 * __pyx_v_L.strides[0]) ) + __pyx_t_22 * __pyx_v_L.strides[1]) )))); } } - /* "GPy/util/choleskies_cython.pyx":59 + /* "GPy/util/choleskies_cython.pyx":61 * dL_dK[i, k] -= dL_dK[i, j] * L[j, k] * dL_dK[j, k] -= dL_dK[i, j] * L[i, k] * for j in range(k + 1, N): # <<<<<<<<<<<<<< * dL_dK[j, k] /= L[k, k] * dL_dK[k, k] -= L[j, k] * dL_dK[j, k] */ - __pyx_t_8 = __pyx_v_N; + __pyx_t_7 = __pyx_v_N; + __pyx_t_8 = __pyx_t_7; for (__pyx_t_9 = (__pyx_v_k + 1); __pyx_t_9 < __pyx_t_8; __pyx_t_9+=1) { __pyx_v_j = __pyx_t_9; - /* "GPy/util/choleskies_cython.pyx":60 + /* "GPy/util/choleskies_cython.pyx":62 * dL_dK[j, k] -= dL_dK[i, j] * L[i, k] * for j in range(k + 1, N): * dL_dK[j, k] /= L[k, k] # <<<<<<<<<<<<<< * dL_dK[k, k] -= L[j, k] * dL_dK[j, k] * dL_dK[k, k] /= (2. * L[k, k]) */ - __pyx_t_10 = __pyx_v_k; - __pyx_t_11 = __pyx_v_k; - if (__pyx_t_10 < 0) __pyx_t_10 += __pyx_v_L.shape[0]; - if (__pyx_t_11 < 0) __pyx_t_11 += __pyx_v_L.shape[1]; - __pyx_t_24 = __pyx_v_j; __pyx_t_25 = __pyx_v_k; - if (__pyx_t_24 < 0) __pyx_t_24 += __pyx_v_dL_dK.shape[0]; - if (__pyx_t_25 < 0) __pyx_t_25 += __pyx_v_dL_dK.shape[1]; - *((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL_dK.data + __pyx_t_24 * __pyx_v_dL_dK.strides[0]) )) + __pyx_t_25)) )) /= (*((double *) ( /* dim=1 */ (( /* dim=0 */ (__pyx_v_L.data + __pyx_t_10 * __pyx_v_L.strides[0]) ) + __pyx_t_11 * __pyx_v_L.strides[1]) ))); + __pyx_t_26 = __pyx_v_k; + if (__pyx_t_25 < 0) __pyx_t_25 += __pyx_v_L.shape[0]; + if (__pyx_t_26 < 0) __pyx_t_26 += __pyx_v_L.shape[1]; + __pyx_t_27 = __pyx_v_j; + __pyx_t_28 = __pyx_v_k; + if (__pyx_t_27 < 0) __pyx_t_27 += __pyx_v_dL_dK.shape[0]; + if (__pyx_t_28 < 0) __pyx_t_28 += __pyx_v_dL_dK.shape[1]; + *((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL_dK.data + __pyx_t_27 * __pyx_v_dL_dK.strides[0]) )) + __pyx_t_28)) )) /= (*((double *) ( /* dim=1 */ (( /* dim=0 */ (__pyx_v_L.data + __pyx_t_25 * __pyx_v_L.strides[0]) ) + __pyx_t_26 * __pyx_v_L.strides[1]) ))); - /* "GPy/util/choleskies_cython.pyx":61 + /* "GPy/util/choleskies_cython.pyx":63 * for j in range(k + 1, N): * dL_dK[j, k] /= L[k, k] * dL_dK[k, k] -= L[j, k] * dL_dK[j, k] # <<<<<<<<<<<<<< * dL_dK[k, k] /= (2. * L[k, k]) * return dL_dK */ - __pyx_t_26 = __pyx_v_j; - __pyx_t_27 = __pyx_v_k; - if (__pyx_t_26 < 0) __pyx_t_26 += __pyx_v_L.shape[0]; - if (__pyx_t_27 < 0) __pyx_t_27 += __pyx_v_L.shape[1]; - __pyx_t_28 = __pyx_v_j; - __pyx_t_29 = __pyx_v_k; - if (__pyx_t_28 < 0) __pyx_t_28 += __pyx_v_dL_dK.shape[0]; - if (__pyx_t_29 < 0) __pyx_t_29 += __pyx_v_dL_dK.shape[1]; + __pyx_t_29 = __pyx_v_j; __pyx_t_30 = __pyx_v_k; - __pyx_t_31 = __pyx_v_k; - if (__pyx_t_30 < 0) __pyx_t_30 += __pyx_v_dL_dK.shape[0]; - if (__pyx_t_31 < 0) __pyx_t_31 += __pyx_v_dL_dK.shape[1]; - *((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL_dK.data + __pyx_t_30 * __pyx_v_dL_dK.strides[0]) )) + __pyx_t_31)) )) -= ((*((double *) ( /* dim=1 */ (( /* dim=0 */ (__pyx_v_L.data + __pyx_t_26 * __pyx_v_L.strides[0]) ) + __pyx_t_27 * __pyx_v_L.strides[1]) ))) * (*((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL_dK.data + __pyx_t_28 * __pyx_v_dL_dK.strides[0]) )) + __pyx_t_29)) )))); + if (__pyx_t_29 < 0) __pyx_t_29 += __pyx_v_L.shape[0]; + if (__pyx_t_30 < 0) __pyx_t_30 += __pyx_v_L.shape[1]; + __pyx_t_31 = __pyx_v_j; + __pyx_t_32 = __pyx_v_k; + if (__pyx_t_31 < 0) __pyx_t_31 += __pyx_v_dL_dK.shape[0]; + if (__pyx_t_32 < 0) __pyx_t_32 += __pyx_v_dL_dK.shape[1]; + __pyx_t_33 = __pyx_v_k; + __pyx_t_34 = __pyx_v_k; + if (__pyx_t_33 < 0) __pyx_t_33 += __pyx_v_dL_dK.shape[0]; + if (__pyx_t_34 < 0) __pyx_t_34 += __pyx_v_dL_dK.shape[1]; + *((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL_dK.data + __pyx_t_33 * __pyx_v_dL_dK.strides[0]) )) + __pyx_t_34)) )) -= ((*((double *) ( /* dim=1 */ (( /* dim=0 */ (__pyx_v_L.data + __pyx_t_29 * __pyx_v_L.strides[0]) ) + __pyx_t_30 * __pyx_v_L.strides[1]) ))) * (*((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL_dK.data + __pyx_t_31 * __pyx_v_dL_dK.strides[0]) )) + __pyx_t_32)) )))); } - /* "GPy/util/choleskies_cython.pyx":62 + /* "GPy/util/choleskies_cython.pyx":64 * dL_dK[j, k] /= L[k, k] * dL_dK[k, k] -= L[j, k] * dL_dK[j, k] * dL_dK[k, k] /= (2. * L[k, k]) # <<<<<<<<<<<<<< * return dL_dK * */ - __pyx_t_8 = __pyx_v_k; - __pyx_t_9 = __pyx_v_k; - if (__pyx_t_8 < 0) __pyx_t_8 += __pyx_v_L.shape[0]; - if (__pyx_t_9 < 0) __pyx_t_9 += __pyx_v_L.shape[1]; - __pyx_t_32 = __pyx_v_k; - __pyx_t_33 = __pyx_v_k; - if (__pyx_t_32 < 0) __pyx_t_32 += __pyx_v_dL_dK.shape[0]; - if (__pyx_t_33 < 0) __pyx_t_33 += __pyx_v_dL_dK.shape[1]; - *((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL_dK.data + __pyx_t_32 * __pyx_v_dL_dK.strides[0]) )) + __pyx_t_33)) )) /= (2. * (*((double *) ( /* dim=1 */ (( /* dim=0 */ (__pyx_v_L.data + __pyx_t_8 * __pyx_v_L.strides[0]) ) + __pyx_t_9 * __pyx_v_L.strides[1]) )))); + __pyx_t_35 = __pyx_v_k; + __pyx_t_36 = __pyx_v_k; + if (__pyx_t_35 < 0) __pyx_t_35 += __pyx_v_L.shape[0]; + if (__pyx_t_36 < 0) __pyx_t_36 += __pyx_v_L.shape[1]; + __pyx_t_37 = __pyx_v_k; + __pyx_t_38 = __pyx_v_k; + if (__pyx_t_37 < 0) __pyx_t_37 += __pyx_v_dL_dK.shape[0]; + if (__pyx_t_38 < 0) __pyx_t_38 += __pyx_v_dL_dK.shape[1]; + *((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL_dK.data + __pyx_t_37 * __pyx_v_dL_dK.strides[0]) )) + __pyx_t_38)) )) /= (2. * (*((double *) ( /* dim=1 */ (( /* dim=0 */ (__pyx_v_L.data + __pyx_t_35 * __pyx_v_L.strides[0]) ) + __pyx_t_36 * __pyx_v_L.strides[1]) )))); } } - /* "GPy/util/choleskies_cython.pyx":53 + /* "GPy/util/choleskies_cython.pyx":55 * cdef int N = L.shape[0] * cdef int k, j, i * with nogil: # <<<<<<<<<<<<<< @@ -2769,6 +3506,7 @@ static PyObject *__pyx_pf_3GPy_4util_17choleskies_cython_4backprop_gradient(CYTH /*finally:*/ { /*normal exit:*/{ #ifdef WITH_THREAD + __Pyx_FastGIL_Forget(); Py_BLOCK_THREADS #endif goto __pyx_L5; @@ -2777,7 +3515,7 @@ static PyObject *__pyx_pf_3GPy_4util_17choleskies_cython_4backprop_gradient(CYTH } } - /* "GPy/util/choleskies_cython.pyx":63 + /* "GPy/util/choleskies_cython.pyx":65 * dL_dK[k, k] -= L[j, k] * dL_dK[j, k] * dL_dK[k, k] /= (2. * L[k, k]) * return dL_dK # <<<<<<<<<<<<<< @@ -2785,13 +3523,13 @@ static PyObject *__pyx_pf_3GPy_4util_17choleskies_cython_4backprop_gradient(CYTH * def backprop_gradient_par(double[:,:] dL, double[:,:] L): */ __Pyx_XDECREF(__pyx_r); - __pyx_t_1 = __pyx_memoryview_fromslice(__pyx_v_dL_dK, 2, (PyObject *(*)(char *)) __pyx_memview_get_double, (int (*)(char *, PyObject *)) __pyx_memview_set_double, 0);; if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 63; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __pyx_memoryview_fromslice(__pyx_v_dL_dK, 2, (PyObject *(*)(char *)) __pyx_memview_get_double, (int (*)(char *, PyObject *)) __pyx_memview_set_double, 0);; if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 65, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_1); __pyx_r = __pyx_t_1; __pyx_t_1 = 0; goto __pyx_L0; - /* "GPy/util/choleskies_cython.pyx":49 + /* "GPy/util/choleskies_cython.pyx":51 * return flat * * def backprop_gradient(double[:, :] dL, double[:, :] L): # <<<<<<<<<<<<<< @@ -2805,8 +3543,7 @@ static PyObject *__pyx_pf_3GPy_4util_17choleskies_cython_4backprop_gradient(CYTH __Pyx_XDECREF(__pyx_t_2); __Pyx_XDECREF(__pyx_t_3); __Pyx_XDECREF(__pyx_t_4); - __Pyx_XDECREF(__pyx_t_5); - __PYX_XDEC_MEMVIEW(&__pyx_t_6, 1); + __PYX_XDEC_MEMVIEW(&__pyx_t_5, 1); __Pyx_AddTraceback("GPy.util.choleskies_cython.backprop_gradient", __pyx_clineno, __pyx_lineno, __pyx_filename); __pyx_r = NULL; __pyx_L0:; @@ -2818,7 +3555,7 @@ static PyObject *__pyx_pf_3GPy_4util_17choleskies_cython_4backprop_gradient(CYTH return __pyx_r; } -/* "GPy/util/choleskies_cython.pyx":65 +/* "GPy/util/choleskies_cython.pyx":67 * return dL_dK * * def backprop_gradient_par(double[:,:] dL, double[:,:] L): # <<<<<<<<<<<<<< @@ -2828,13 +3565,10 @@ static PyObject *__pyx_pf_3GPy_4util_17choleskies_cython_4backprop_gradient(CYTH /* Python wrapper */ static PyObject *__pyx_pw_3GPy_4util_17choleskies_cython_7backprop_gradient_par(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds); /*proto*/ -static PyMethodDef __pyx_mdef_3GPy_4util_17choleskies_cython_7backprop_gradient_par = {"backprop_gradient_par", (PyCFunction)__pyx_pw_3GPy_4util_17choleskies_cython_7backprop_gradient_par, METH_VARARGS|METH_KEYWORDS, 0}; +static PyMethodDef __pyx_mdef_3GPy_4util_17choleskies_cython_7backprop_gradient_par = {"backprop_gradient_par", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_4util_17choleskies_cython_7backprop_gradient_par, METH_VARARGS|METH_KEYWORDS, 0}; static PyObject *__pyx_pw_3GPy_4util_17choleskies_cython_7backprop_gradient_par(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds) { __Pyx_memviewslice __pyx_v_dL = { 0, 0, { 0 }, { 0 }, { 0 } }; __Pyx_memviewslice __pyx_v_L = { 0, 0, { 0 }, { 0 }, { 0 } }; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; PyObject *__pyx_r = 0; __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("backprop_gradient_par (wrapper)", 0); @@ -2846,23 +3580,26 @@ static PyObject *__pyx_pw_3GPy_4util_17choleskies_cython_7backprop_gradient_par( const Py_ssize_t pos_args = PyTuple_GET_SIZE(__pyx_args); switch (pos_args) { case 2: values[1] = PyTuple_GET_ITEM(__pyx_args, 1); + CYTHON_FALLTHROUGH; case 1: values[0] = PyTuple_GET_ITEM(__pyx_args, 0); + CYTHON_FALLTHROUGH; case 0: break; default: goto __pyx_L5_argtuple_error; } kw_args = PyDict_Size(__pyx_kwds); switch (pos_args) { case 0: - if (likely((values[0] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_dL)) != 0)) kw_args--; 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- __pyx_t_9 = __pyx_v_N; + __pyx_t_7 = (__pyx_v_k + 1); + __pyx_t_8 = __pyx_v_N; if (1 == 0) abort(); { - __pyx_t_11 = (__pyx_t_9 - __pyx_t_8) / 1; - if (__pyx_t_11 > 0) + __pyx_t_10 = (__pyx_t_8 - __pyx_t_7 + 1 - 1/abs(1)) / 1; + if (__pyx_t_10 > 0) { #ifdef _OPENMP #pragma omp for firstprivate(__pyx_v_i) lastprivate(__pyx_v_i) lastprivate(__pyx_v_j) #endif /* _OPENMP */ - for (__pyx_t_10 = 0; __pyx_t_10 < __pyx_t_11; __pyx_t_10++){ + for (__pyx_t_9 = 0; __pyx_t_9 < __pyx_t_10; __pyx_t_9++){ { - __pyx_v_i = __pyx_t_8 + 1 * __pyx_t_10; + __pyx_v_i = (int)(__pyx_t_7 + 1 * __pyx_t_9); /* Initialize private variables to invalid values */ __pyx_v_j = ((int)0xbad0bad0); - /* "GPy/util/choleskies_cython.pyx":73 + /* "GPy/util/choleskies_cython.pyx":75 * with parallel(): * for i in prange(k + 1, N): * for j in range(k+1, i+1): # <<<<<<<<<<<<<< * dL_dK[i, k] -= dL_dK[i, j] * L[j, k] * for j in range(i, N): */ - __pyx_t_12 = (__pyx_v_i + 1); + __pyx_t_11 = (__pyx_v_i + 1); + __pyx_t_12 = __pyx_t_11; for (__pyx_t_13 = (__pyx_v_k + 1); __pyx_t_13 < __pyx_t_12; __pyx_t_13+=1) { __pyx_v_j = __pyx_t_13; - /* "GPy/util/choleskies_cython.pyx":74 + /* "GPy/util/choleskies_cython.pyx":76 * for i in prange(k + 1, N): * for j in range(k+1, i+1): * dL_dK[i, k] -= dL_dK[i, j] * L[j, k] # <<<<<<<<<<<<<< @@ -3093,7 +3822,7 @@ static PyObject *__pyx_pf_3GPy_4util_17choleskies_cython_6backprop_gradient_par( *((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL_dK.data + __pyx_t_18 * __pyx_v_dL_dK.strides[0]) )) + __pyx_t_19)) )) -= ((*((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL_dK.data + __pyx_t_14 * __pyx_v_dL_dK.strides[0]) )) + __pyx_t_15)) ))) * (*((double *) ( /* dim=1 */ (( /* dim=0 */ (__pyx_v_L.data + __pyx_t_16 * __pyx_v_L.strides[0]) ) + __pyx_t_17 * __pyx_v_L.strides[1]) )))); } - /* "GPy/util/choleskies_cython.pyx":75 + /* "GPy/util/choleskies_cython.pyx":77 * for j in range(k+1, i+1): * dL_dK[i, k] -= dL_dK[i, j] * L[j, k] * for j in range(i, N): # <<<<<<<<<<<<<< @@ -3101,29 +3830,30 @@ static PyObject *__pyx_pf_3GPy_4util_17choleskies_cython_6backprop_gradient_par( * for j in range(k + 1, N): */ __pyx_t_13 = __pyx_v_N; - for (__pyx_t_20 = __pyx_v_i; __pyx_t_20 < __pyx_t_13; __pyx_t_20+=1) { - __pyx_v_j = __pyx_t_20; + __pyx_t_20 = __pyx_t_13; + for (__pyx_t_21 = __pyx_v_i; __pyx_t_21 < __pyx_t_20; __pyx_t_21+=1) { + __pyx_v_j = __pyx_t_21; - /* "GPy/util/choleskies_cython.pyx":76 + /* "GPy/util/choleskies_cython.pyx":78 * dL_dK[i, k] -= dL_dK[i, j] * L[j, k] * for j in range(i, N): * dL_dK[i, k] -= dL_dK[j, i] * L[j, k] # <<<<<<<<<<<<<< * for j in range(k + 1, N): * dL_dK[j, k] /= L[k, k] */ - __pyx_t_21 = __pyx_v_j; - __pyx_t_22 = __pyx_v_i; - if (__pyx_t_21 < 0) __pyx_t_21 += __pyx_v_dL_dK.shape[0]; - if (__pyx_t_22 < 0) __pyx_t_22 += __pyx_v_dL_dK.shape[1]; - __pyx_t_23 = __pyx_v_j; - __pyx_t_24 = __pyx_v_k; - if (__pyx_t_23 < 0) __pyx_t_23 += __pyx_v_L.shape[0]; - if (__pyx_t_24 < 0) __pyx_t_24 += __pyx_v_L.shape[1]; - __pyx_t_25 = __pyx_v_i; - __pyx_t_26 = __pyx_v_k; - if (__pyx_t_25 < 0) __pyx_t_25 += __pyx_v_dL_dK.shape[0]; - if (__pyx_t_26 < 0) __pyx_t_26 += __pyx_v_dL_dK.shape[1]; - *((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL_dK.data + __pyx_t_25 * __pyx_v_dL_dK.strides[0]) )) + __pyx_t_26)) )) -= ((*((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL_dK.data + __pyx_t_21 * __pyx_v_dL_dK.strides[0]) )) + __pyx_t_22)) ))) * (*((double *) ( /* dim=1 */ (( /* dim=0 */ (__pyx_v_L.data + __pyx_t_23 * __pyx_v_L.strides[0]) ) + __pyx_t_24 * __pyx_v_L.strides[1]) )))); + __pyx_t_22 = __pyx_v_j; + __pyx_t_23 = __pyx_v_i; + if (__pyx_t_22 < 0) __pyx_t_22 += __pyx_v_dL_dK.shape[0]; + if (__pyx_t_23 < 0) __pyx_t_23 += __pyx_v_dL_dK.shape[1]; + __pyx_t_24 = __pyx_v_j; + __pyx_t_25 = __pyx_v_k; + if (__pyx_t_24 < 0) __pyx_t_24 += __pyx_v_L.shape[0]; + if (__pyx_t_25 < 0) __pyx_t_25 += __pyx_v_L.shape[1]; + __pyx_t_26 = __pyx_v_i; + __pyx_t_27 = __pyx_v_k; + if (__pyx_t_26 < 0) __pyx_t_26 += __pyx_v_dL_dK.shape[0]; + if (__pyx_t_27 < 0) __pyx_t_27 += __pyx_v_dL_dK.shape[1]; + *((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL_dK.data + __pyx_t_26 * __pyx_v_dL_dK.strides[0]) )) + __pyx_t_27)) )) -= ((*((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL_dK.data + __pyx_t_22 * __pyx_v_dL_dK.strides[0]) )) + __pyx_t_23)) ))) * (*((double *) ( /* dim=1 */ (( /* dim=0 */ (__pyx_v_L.data + __pyx_t_24 * __pyx_v_L.strides[0]) ) + __pyx_t_25 * __pyx_v_L.strides[1]) )))); } } } @@ -3138,76 +3868,77 @@ static PyObject *__pyx_pf_3GPy_4util_17choleskies_cython_6backprop_gradient_par( #define unlikely(x) __builtin_expect(!!(x), 0) #endif - /* "GPy/util/choleskies_cython.pyx":77 + /* "GPy/util/choleskies_cython.pyx":79 * for j in range(i, N): * dL_dK[i, k] -= dL_dK[j, i] * L[j, k] * for j in range(k + 1, N): # <<<<<<<<<<<<<< * dL_dK[j, k] /= L[k, k] * dL_dK[k, k] -= L[j, k] * dL_dK[j, k] */ - __pyx_t_9 = __pyx_v_N; - for (__pyx_t_13 = (__pyx_v_k + 1); __pyx_t_13 < __pyx_t_9; __pyx_t_13+=1) { - __pyx_v_j = __pyx_t_13; + __pyx_t_8 = __pyx_v_N; + __pyx_t_13 = __pyx_t_8; + for (__pyx_t_20 = (__pyx_v_k + 1); __pyx_t_20 < __pyx_t_13; __pyx_t_20+=1) { + __pyx_v_j = __pyx_t_20; - /* "GPy/util/choleskies_cython.pyx":78 + /* "GPy/util/choleskies_cython.pyx":80 * dL_dK[i, k] -= dL_dK[j, i] * L[j, k] * for j in range(k + 1, N): * dL_dK[j, k] /= L[k, k] # <<<<<<<<<<<<<< * dL_dK[k, k] -= L[j, k] * dL_dK[j, k] * dL_dK[k, k] /= (2. * L[k, k]) */ - __pyx_t_20 = __pyx_v_k; - __pyx_t_27 = __pyx_v_k; - if (__pyx_t_20 < 0) __pyx_t_20 += __pyx_v_L.shape[0]; - if (__pyx_t_27 < 0) __pyx_t_27 += __pyx_v_L.shape[1]; - __pyx_t_28 = __pyx_v_j; + __pyx_t_28 = __pyx_v_k; __pyx_t_29 = __pyx_v_k; - if (__pyx_t_28 < 0) __pyx_t_28 += __pyx_v_dL_dK.shape[0]; - if (__pyx_t_29 < 0) __pyx_t_29 += __pyx_v_dL_dK.shape[1]; - *((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL_dK.data + __pyx_t_28 * __pyx_v_dL_dK.strides[0]) )) + __pyx_t_29)) )) /= (*((double *) ( /* dim=1 */ (( /* dim=0 */ (__pyx_v_L.data + __pyx_t_20 * __pyx_v_L.strides[0]) ) + __pyx_t_27 * __pyx_v_L.strides[1]) ))); + if (__pyx_t_28 < 0) __pyx_t_28 += __pyx_v_L.shape[0]; + if (__pyx_t_29 < 0) __pyx_t_29 += __pyx_v_L.shape[1]; + __pyx_t_30 = __pyx_v_j; + __pyx_t_31 = __pyx_v_k; + if (__pyx_t_30 < 0) __pyx_t_30 += __pyx_v_dL_dK.shape[0]; + if (__pyx_t_31 < 0) __pyx_t_31 += __pyx_v_dL_dK.shape[1]; + *((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL_dK.data + __pyx_t_30 * __pyx_v_dL_dK.strides[0]) )) + __pyx_t_31)) )) /= (*((double *) ( /* dim=1 */ (( /* dim=0 */ (__pyx_v_L.data + __pyx_t_28 * __pyx_v_L.strides[0]) ) + __pyx_t_29 * __pyx_v_L.strides[1]) ))); - /* "GPy/util/choleskies_cython.pyx":79 + /* "GPy/util/choleskies_cython.pyx":81 * for j in range(k + 1, N): * dL_dK[j, k] /= L[k, k] * dL_dK[k, k] -= L[j, k] * dL_dK[j, k] # <<<<<<<<<<<<<< * dL_dK[k, k] /= (2. * L[k, k]) * return dL_dK */ - __pyx_t_30 = __pyx_v_j; - __pyx_t_31 = __pyx_v_k; - if (__pyx_t_30 < 0) __pyx_t_30 += __pyx_v_L.shape[0]; - if (__pyx_t_31 < 0) __pyx_t_31 += __pyx_v_L.shape[1]; __pyx_t_32 = __pyx_v_j; __pyx_t_33 = __pyx_v_k; - if (__pyx_t_32 < 0) __pyx_t_32 += __pyx_v_dL_dK.shape[0]; - if (__pyx_t_33 < 0) __pyx_t_33 += __pyx_v_dL_dK.shape[1]; - __pyx_t_34 = __pyx_v_k; + if (__pyx_t_32 < 0) __pyx_t_32 += __pyx_v_L.shape[0]; + if (__pyx_t_33 < 0) __pyx_t_33 += __pyx_v_L.shape[1]; + __pyx_t_34 = __pyx_v_j; __pyx_t_35 = __pyx_v_k; if (__pyx_t_34 < 0) __pyx_t_34 += __pyx_v_dL_dK.shape[0]; if (__pyx_t_35 < 0) __pyx_t_35 += __pyx_v_dL_dK.shape[1]; - *((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL_dK.data + __pyx_t_34 * __pyx_v_dL_dK.strides[0]) )) + __pyx_t_35)) )) -= ((*((double *) ( /* dim=1 */ (( /* dim=0 */ (__pyx_v_L.data + __pyx_t_30 * __pyx_v_L.strides[0]) ) + __pyx_t_31 * __pyx_v_L.strides[1]) ))) * (*((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL_dK.data + __pyx_t_32 * __pyx_v_dL_dK.strides[0]) )) + __pyx_t_33)) )))); + __pyx_t_36 = __pyx_v_k; + __pyx_t_37 = __pyx_v_k; + if (__pyx_t_36 < 0) __pyx_t_36 += __pyx_v_dL_dK.shape[0]; + if (__pyx_t_37 < 0) __pyx_t_37 += __pyx_v_dL_dK.shape[1]; + *((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL_dK.data + __pyx_t_36 * __pyx_v_dL_dK.strides[0]) )) + __pyx_t_37)) )) -= ((*((double *) ( /* dim=1 */ (( /* dim=0 */ (__pyx_v_L.data + __pyx_t_32 * __pyx_v_L.strides[0]) ) + __pyx_t_33 * __pyx_v_L.strides[1]) ))) * (*((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL_dK.data + __pyx_t_34 * __pyx_v_dL_dK.strides[0]) )) + __pyx_t_35)) )))); } - /* "GPy/util/choleskies_cython.pyx":80 + /* "GPy/util/choleskies_cython.pyx":82 * dL_dK[j, k] /= L[k, k] * dL_dK[k, k] -= L[j, k] * dL_dK[j, k] * dL_dK[k, k] /= (2. * L[k, k]) # <<<<<<<<<<<<<< * return dL_dK * */ - __pyx_t_9 = __pyx_v_k; - __pyx_t_13 = __pyx_v_k; - if (__pyx_t_9 < 0) __pyx_t_9 += __pyx_v_L.shape[0]; - if (__pyx_t_13 < 0) __pyx_t_13 += __pyx_v_L.shape[1]; - __pyx_t_36 = __pyx_v_k; - __pyx_t_37 = __pyx_v_k; - if (__pyx_t_36 < 0) __pyx_t_36 += __pyx_v_dL_dK.shape[0]; - if (__pyx_t_37 < 0) __pyx_t_37 += __pyx_v_dL_dK.shape[1]; - *((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL_dK.data + __pyx_t_36 * __pyx_v_dL_dK.strides[0]) )) + __pyx_t_37)) )) /= (2. * (*((double *) ( /* dim=1 */ (( /* dim=0 */ (__pyx_v_L.data + __pyx_t_9 * __pyx_v_L.strides[0]) ) + __pyx_t_13 * __pyx_v_L.strides[1]) )))); + __pyx_t_38 = __pyx_v_k; + __pyx_t_39 = __pyx_v_k; + if (__pyx_t_38 < 0) __pyx_t_38 += __pyx_v_L.shape[0]; + if (__pyx_t_39 < 0) __pyx_t_39 += __pyx_v_L.shape[1]; + __pyx_t_40 = __pyx_v_k; + __pyx_t_41 = __pyx_v_k; + if (__pyx_t_40 < 0) __pyx_t_40 += __pyx_v_dL_dK.shape[0]; + if (__pyx_t_41 < 0) __pyx_t_41 += __pyx_v_dL_dK.shape[1]; + *((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL_dK.data + __pyx_t_40 * __pyx_v_dL_dK.strides[0]) )) + __pyx_t_41)) )) /= (2. * (*((double *) ( /* dim=1 */ (( /* dim=0 */ (__pyx_v_L.data + __pyx_t_38 * __pyx_v_L.strides[0]) ) + __pyx_t_39 * __pyx_v_L.strides[1]) )))); } } - /* "GPy/util/choleskies_cython.pyx":69 + /* "GPy/util/choleskies_cython.pyx":71 * cdef int N = L.shape[0] * cdef int k, j, i * with nogil: # <<<<<<<<<<<<<< @@ -3217,6 +3948,7 @@ static PyObject *__pyx_pf_3GPy_4util_17choleskies_cython_6backprop_gradient_par( /*finally:*/ { /*normal exit:*/{ #ifdef WITH_THREAD + __Pyx_FastGIL_Forget(); Py_BLOCK_THREADS #endif goto __pyx_L5; @@ -3225,7 +3957,7 @@ static PyObject *__pyx_pf_3GPy_4util_17choleskies_cython_6backprop_gradient_par( } } - /* "GPy/util/choleskies_cython.pyx":81 + /* "GPy/util/choleskies_cython.pyx":83 * dL_dK[k, k] -= L[j, k] * dL_dK[j, k] * dL_dK[k, k] /= (2. * L[k, k]) * return dL_dK # <<<<<<<<<<<<<< @@ -3233,13 +3965,13 @@ static PyObject *__pyx_pf_3GPy_4util_17choleskies_cython_6backprop_gradient_par( * cdef void chol_backprop(int N, double[:, ::1] dL, double[:, ::1] L) nogil: */ __Pyx_XDECREF(__pyx_r); - __pyx_t_1 = __pyx_memoryview_fromslice(__pyx_v_dL_dK, 2, (PyObject *(*)(char *)) __pyx_memview_get_double, (int (*)(char *, PyObject *)) __pyx_memview_set_double, 0);; if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 81; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __pyx_memoryview_fromslice(__pyx_v_dL_dK, 2, (PyObject *(*)(char *)) __pyx_memview_get_double, (int (*)(char *, PyObject *)) __pyx_memview_set_double, 0);; if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 83, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_1); __pyx_r = __pyx_t_1; __pyx_t_1 = 0; goto __pyx_L0; - /* "GPy/util/choleskies_cython.pyx":65 + /* "GPy/util/choleskies_cython.pyx":67 * return dL_dK * * def backprop_gradient_par(double[:,:] dL, double[:,:] L): # <<<<<<<<<<<<<< @@ -3253,8 +3985,7 @@ static PyObject *__pyx_pf_3GPy_4util_17choleskies_cython_6backprop_gradient_par( __Pyx_XDECREF(__pyx_t_2); __Pyx_XDECREF(__pyx_t_3); __Pyx_XDECREF(__pyx_t_4); - __Pyx_XDECREF(__pyx_t_5); - __PYX_XDEC_MEMVIEW(&__pyx_t_6, 1); + __PYX_XDEC_MEMVIEW(&__pyx_t_5, 1); __Pyx_AddTraceback("GPy.util.choleskies_cython.backprop_gradient_par", __pyx_clineno, __pyx_lineno, __pyx_filename); __pyx_r = NULL; __pyx_L0:; @@ -3266,7 +3997,7 @@ static PyObject *__pyx_pf_3GPy_4util_17choleskies_cython_6backprop_gradient_par( return __pyx_r; } -/* "GPy/util/choleskies_cython.pyx":83 +/* "GPy/util/choleskies_cython.pyx":85 * return dL_dK * * cdef void chol_backprop(int N, double[:, ::1] dL, double[:, ::1] L) nogil: # <<<<<<<<<<<<<< @@ -3282,43 +4013,43 @@ static void __pyx_f_3GPy_4util_17choleskies_cython_chol_backprop(int __pyx_v_N, double __pyx_v_beta; int __pyx_v_incx; double __pyx_v_scale; - long __pyx_t_1; - long __pyx_t_2; - long __pyx_t_3; - long __pyx_t_4; + Py_ssize_t __pyx_t_1; + Py_ssize_t __pyx_t_2; + Py_ssize_t __pyx_t_3; + Py_ssize_t __pyx_t_4; int __pyx_t_5; - long __pyx_t_6; - long __pyx_t_7; - long __pyx_t_8; - int __pyx_t_9; - long __pyx_t_10; - int __pyx_t_11; + Py_ssize_t __pyx_t_6; + Py_ssize_t __pyx_t_7; + Py_ssize_t __pyx_t_8; + Py_ssize_t __pyx_t_9; + Py_ssize_t __pyx_t_10; + Py_ssize_t __pyx_t_11; long __pyx_t_12; - int __pyx_t_13; - long __pyx_t_14; - long __pyx_t_15; - long __pyx_t_16; - int __pyx_t_17; - long __pyx_t_18; - int __pyx_t_19; - int __pyx_t_20; - double __pyx_t_21; - int __pyx_t_22; - long __pyx_t_23; - int __pyx_t_24; - long __pyx_t_25; - int __pyx_t_26; - int __pyx_t_27; - int __pyx_t_28; - int __pyx_t_29; - int __pyx_t_30; - int __pyx_t_31; - int __pyx_t_32; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; + long __pyx_t_13; + int __pyx_t_14; + Py_ssize_t __pyx_t_15; + Py_ssize_t __pyx_t_16; + Py_ssize_t __pyx_t_17; + Py_ssize_t __pyx_t_18; + Py_ssize_t __pyx_t_19; + Py_ssize_t __pyx_t_20; + Py_ssize_t __pyx_t_21; + Py_ssize_t __pyx_t_22; + double __pyx_t_23; + Py_ssize_t __pyx_t_24; + Py_ssize_t __pyx_t_25; + Py_ssize_t __pyx_t_26; + Py_ssize_t __pyx_t_27; + Py_ssize_t __pyx_t_28; + Py_ssize_t __pyx_t_29; + Py_ssize_t __pyx_t_30; + Py_ssize_t __pyx_t_31; + Py_ssize_t __pyx_t_32; + Py_ssize_t __pyx_t_33; + Py_ssize_t __pyx_t_34; + Py_ssize_t __pyx_t_35; - /* "GPy/util/choleskies_cython.pyx":87 + /* "GPy/util/choleskies_cython.pyx":89 * * # DSYMV required constant arguments * cdef double alpha=-1, beta=1 # <<<<<<<<<<<<<< @@ -3328,7 +4059,7 @@ static void __pyx_f_3GPy_4util_17choleskies_cython_chol_backprop(int __pyx_v_N, __pyx_v_alpha = -1.0; __pyx_v_beta = 1.0; - /* "GPy/util/choleskies_cython.pyx":88 + /* "GPy/util/choleskies_cython.pyx":90 * # DSYMV required constant arguments * cdef double alpha=-1, beta=1 * cdef int incx=N # <<<<<<<<<<<<<< @@ -3337,7 +4068,7 @@ static void __pyx_f_3GPy_4util_17choleskies_cython_chol_backprop(int __pyx_v_N, */ __pyx_v_incx = __pyx_v_N; - /* "GPy/util/choleskies_cython.pyx":93 + /* "GPy/util/choleskies_cython.pyx":95 * cdef double scale * * dL[N - 1, N - 1] /= (2. * L[N - 1, N - 1]) # <<<<<<<<<<<<<< @@ -3354,7 +4085,7 @@ static void __pyx_f_3GPy_4util_17choleskies_cython_chol_backprop(int __pyx_v_N, if (__pyx_t_4 < 0) __pyx_t_4 += __pyx_v_dL.shape[1]; *((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL.data + __pyx_t_3 * __pyx_v_dL.strides[0]) )) + __pyx_t_4)) )) /= (2. * (*((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_L.data + __pyx_t_1 * __pyx_v_L.strides[0]) )) + __pyx_t_2)) )))); - /* "GPy/util/choleskies_cython.pyx":94 + /* "GPy/util/choleskies_cython.pyx":96 * * dL[N - 1, N - 1] /= (2. * L[N - 1, N - 1]) * for k in range(N-2, -1, -1): # <<<<<<<<<<<<<< @@ -3364,7 +4095,7 @@ static void __pyx_f_3GPy_4util_17choleskies_cython_chol_backprop(int __pyx_v_N, for (__pyx_t_5 = (__pyx_v_N - 2); __pyx_t_5 > -1; __pyx_t_5-=1) { __pyx_v_k = __pyx_t_5; - /* "GPy/util/choleskies_cython.pyx":95 + /* "GPy/util/choleskies_cython.pyx":97 * dL[N - 1, N - 1] /= (2. * L[N - 1, N - 1]) * for k in range(N-2, -1, -1): * n = N-k-1 # <<<<<<<<<<<<<< @@ -3373,7 +4104,7 @@ static void __pyx_f_3GPy_4util_17choleskies_cython_chol_backprop(int __pyx_v_N, */ __pyx_v_n = ((__pyx_v_N - __pyx_v_k) - 1); - /* "GPy/util/choleskies_cython.pyx":96 + /* "GPy/util/choleskies_cython.pyx":98 * for k in range(N-2, -1, -1): * n = N-k-1 * cblas.dsymv(uplo='u', n=&n, alpha=&alpha, a=&dL[k + 1, k + 1], lda=&N, x=&L[k + 1, k], incx=&incx, # <<<<<<<<<<<<<< @@ -3389,7 +4120,7 @@ static void __pyx_f_3GPy_4util_17choleskies_cython_chol_backprop(int __pyx_v_N, if (__pyx_t_8 < 0) __pyx_t_8 += __pyx_v_L.shape[0]; if (__pyx_t_9 < 0) __pyx_t_9 += __pyx_v_L.shape[1]; - /* "GPy/util/choleskies_cython.pyx":97 + /* "GPy/util/choleskies_cython.pyx":99 * n = N-k-1 * cblas.dsymv(uplo='u', n=&n, alpha=&alpha, a=&dL[k + 1, k + 1], lda=&N, x=&L[k + 1, k], incx=&incx, * beta=&beta, y=&dL[k + 1, k], incy=&N) # <<<<<<<<<<<<<< @@ -3401,16 +4132,16 @@ static void __pyx_f_3GPy_4util_17choleskies_cython_chol_backprop(int __pyx_v_N, if (__pyx_t_10 < 0) __pyx_t_10 += __pyx_v_dL.shape[0]; if (__pyx_t_11 < 0) __pyx_t_11 += __pyx_v_dL.shape[1]; - /* "GPy/util/choleskies_cython.pyx":96 + /* "GPy/util/choleskies_cython.pyx":98 * for k in range(N-2, -1, -1): * n = N-k-1 * cblas.dsymv(uplo='u', n=&n, alpha=&alpha, a=&dL[k + 1, k + 1], lda=&N, x=&L[k + 1, k], incx=&incx, # <<<<<<<<<<<<<< * beta=&beta, y=&dL[k + 1, k], incy=&N) * */ - __pyx_f_5scipy_6linalg_11cython_blas_dsymv(__pyx_k_u, (&__pyx_v_n), (&__pyx_v_alpha), (&(*((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL.data + __pyx_t_6 * __pyx_v_dL.strides[0]) )) + __pyx_t_7)) )))), (&__pyx_v_N), (&(*((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_L.data + __pyx_t_8 * __pyx_v_L.strides[0]) )) + __pyx_t_9)) )))), (&__pyx_v_incx), (&__pyx_v_beta), (&(*((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL.data + __pyx_t_10 * __pyx_v_dL.strides[0]) )) + __pyx_t_11)) )))), (&__pyx_v_N)); + __pyx_f_5scipy_6linalg_11cython_blas_dsymv(((char *)"u"), (&__pyx_v_n), (&__pyx_v_alpha), (&(*((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL.data + __pyx_t_6 * __pyx_v_dL.strides[0]) )) + __pyx_t_7)) )))), (&__pyx_v_N), (&(*((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_L.data + __pyx_t_8 * __pyx_v_L.strides[0]) )) + __pyx_t_9)) )))), (&__pyx_v_incx), (&__pyx_v_beta), (&(*((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL.data + __pyx_t_10 * __pyx_v_dL.strides[0]) )) + __pyx_t_11)) )))), (&__pyx_v_N)); - /* "GPy/util/choleskies_cython.pyx":99 + /* "GPy/util/choleskies_cython.pyx":101 * beta=&beta, y=&dL[k + 1, k], incy=&N) * * for i in xrange(0, N - k - 1): # <<<<<<<<<<<<<< @@ -3418,108 +4149,109 @@ static void __pyx_f_3GPy_4util_17choleskies_cython_chol_backprop(int __pyx_v_N, * */ __pyx_t_12 = ((__pyx_v_N - __pyx_v_k) - 1); - for (__pyx_t_13 = 0; __pyx_t_13 < __pyx_t_12; __pyx_t_13+=1) { - __pyx_v_i = __pyx_t_13; + __pyx_t_13 = __pyx_t_12; + for (__pyx_t_14 = 0; __pyx_t_14 < __pyx_t_13; __pyx_t_14+=1) { + __pyx_v_i = __pyx_t_14; - /* "GPy/util/choleskies_cython.pyx":100 + /* "GPy/util/choleskies_cython.pyx":102 * * for i in xrange(0, N - k - 1): * dL[k + 1 + i, k] -= dL[k + i+ 1, k + i + 1] * L[k + 1 + i, k] # <<<<<<<<<<<<<< * * scale = 1.0 / L[k, k] */ - __pyx_t_14 = ((__pyx_v_k + __pyx_v_i) + 1); __pyx_t_15 = ((__pyx_v_k + __pyx_v_i) + 1); - if (__pyx_t_14 < 0) __pyx_t_14 += __pyx_v_dL.shape[0]; - if (__pyx_t_15 < 0) __pyx_t_15 += __pyx_v_dL.shape[1]; - __pyx_t_16 = ((__pyx_v_k + 1) + __pyx_v_i); - __pyx_t_17 = __pyx_v_k; - if (__pyx_t_16 < 0) __pyx_t_16 += __pyx_v_L.shape[0]; - if (__pyx_t_17 < 0) __pyx_t_17 += __pyx_v_L.shape[1]; - __pyx_t_18 = ((__pyx_v_k + 1) + __pyx_v_i); - __pyx_t_19 = __pyx_v_k; - if (__pyx_t_18 < 0) __pyx_t_18 += __pyx_v_dL.shape[0]; - if (__pyx_t_19 < 0) __pyx_t_19 += __pyx_v_dL.shape[1]; - *((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL.data + __pyx_t_18 * __pyx_v_dL.strides[0]) )) + __pyx_t_19)) )) -= ((*((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL.data + __pyx_t_14 * __pyx_v_dL.strides[0]) )) + __pyx_t_15)) ))) * (*((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_L.data + __pyx_t_16 * __pyx_v_L.strides[0]) )) + __pyx_t_17)) )))); + __pyx_t_16 = ((__pyx_v_k + __pyx_v_i) + 1); + if (__pyx_t_15 < 0) __pyx_t_15 += __pyx_v_dL.shape[0]; + if (__pyx_t_16 < 0) __pyx_t_16 += __pyx_v_dL.shape[1]; + __pyx_t_17 = ((__pyx_v_k + 1) + __pyx_v_i); + __pyx_t_18 = __pyx_v_k; + if (__pyx_t_17 < 0) __pyx_t_17 += __pyx_v_L.shape[0]; + if (__pyx_t_18 < 0) __pyx_t_18 += __pyx_v_L.shape[1]; + __pyx_t_19 = ((__pyx_v_k + 1) + __pyx_v_i); + __pyx_t_20 = __pyx_v_k; + if (__pyx_t_19 < 0) __pyx_t_19 += __pyx_v_dL.shape[0]; + if (__pyx_t_20 < 0) __pyx_t_20 += __pyx_v_dL.shape[1]; + *((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL.data + __pyx_t_19 * __pyx_v_dL.strides[0]) )) + __pyx_t_20)) )) -= ((*((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL.data + __pyx_t_15 * __pyx_v_dL.strides[0]) )) + __pyx_t_16)) ))) * (*((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_L.data + __pyx_t_17 * __pyx_v_L.strides[0]) )) + __pyx_t_18)) )))); } - /* "GPy/util/choleskies_cython.pyx":102 + /* "GPy/util/choleskies_cython.pyx":104 * dL[k + 1 + i, k] -= dL[k + i+ 1, k + i + 1] * L[k + 1 + i, k] * * scale = 1.0 / L[k, k] # <<<<<<<<<<<<<< * cblas.dscal(&n, &scale , &dL[k + 1, k], &N) * # */ - __pyx_t_13 = __pyx_v_k; - __pyx_t_20 = __pyx_v_k; - if (__pyx_t_13 < 0) __pyx_t_13 += __pyx_v_L.shape[0]; - if (__pyx_t_20 < 0) __pyx_t_20 += __pyx_v_L.shape[1]; - __pyx_t_21 = (*((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_L.data + __pyx_t_13 * __pyx_v_L.strides[0]) )) + __pyx_t_20)) ))); - if (unlikely(__pyx_t_21 == 0)) { + __pyx_t_21 = __pyx_v_k; + __pyx_t_22 = __pyx_v_k; + if (__pyx_t_21 < 0) __pyx_t_21 += __pyx_v_L.shape[0]; + if (__pyx_t_22 < 0) __pyx_t_22 += __pyx_v_L.shape[1]; + __pyx_t_23 = (*((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_L.data + __pyx_t_21 * __pyx_v_L.strides[0]) )) + __pyx_t_22)) ))); + if (unlikely(__pyx_t_23 == 0)) { #ifdef WITH_THREAD - PyGILState_STATE __pyx_gilstate_save = PyGILState_Ensure(); + PyGILState_STATE __pyx_gilstate_save = __Pyx_PyGILState_Ensure(); #endif PyErr_SetString(PyExc_ZeroDivisionError, "float division"); #ifdef WITH_THREAD - PyGILState_Release(__pyx_gilstate_save); + __Pyx_PyGILState_Release(__pyx_gilstate_save); #endif - {__pyx_filename = __pyx_f[0]; __pyx_lineno = 102; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __PYX_ERR(0, 104, __pyx_L1_error) } - __pyx_v_scale = (1.0 / __pyx_t_21); + __pyx_v_scale = (1.0 / __pyx_t_23); - /* "GPy/util/choleskies_cython.pyx":103 + /* "GPy/util/choleskies_cython.pyx":105 * * scale = 1.0 / L[k, k] * cblas.dscal(&n, &scale , &dL[k + 1, k], &N) # <<<<<<<<<<<<<< * # * dL[k, k] -= cblas.ddot(&n, &dL[k + 1, k], &N, &L[k+1, k], &incx) */ - __pyx_t_12 = (__pyx_v_k + 1); - __pyx_t_22 = __pyx_v_k; - if (__pyx_t_12 < 0) __pyx_t_12 += __pyx_v_dL.shape[0]; - if (__pyx_t_22 < 0) __pyx_t_22 += __pyx_v_dL.shape[1]; - __pyx_f_5scipy_6linalg_11cython_blas_dscal((&__pyx_v_n), (&__pyx_v_scale), (&(*((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL.data + __pyx_t_12 * __pyx_v_dL.strides[0]) )) + __pyx_t_22)) )))), (&__pyx_v_N)); + __pyx_t_24 = (__pyx_v_k + 1); + __pyx_t_25 = __pyx_v_k; + if (__pyx_t_24 < 0) __pyx_t_24 += __pyx_v_dL.shape[0]; + if (__pyx_t_25 < 0) __pyx_t_25 += __pyx_v_dL.shape[1]; + __pyx_f_5scipy_6linalg_11cython_blas_dscal((&__pyx_v_n), (&__pyx_v_scale), (&(*((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL.data + __pyx_t_24 * __pyx_v_dL.strides[0]) )) + __pyx_t_25)) )))), (&__pyx_v_N)); - /* "GPy/util/choleskies_cython.pyx":105 + /* "GPy/util/choleskies_cython.pyx":107 * cblas.dscal(&n, &scale , &dL[k + 1, k], &N) * # * dL[k, k] -= cblas.ddot(&n, &dL[k + 1, k], &N, &L[k+1, k], &incx) # <<<<<<<<<<<<<< * dL[k, k] /= (2.0 * L[k, k]) * */ - __pyx_t_23 = (__pyx_v_k + 1); - __pyx_t_24 = __pyx_v_k; - if (__pyx_t_23 < 0) __pyx_t_23 += __pyx_v_dL.shape[0]; - if (__pyx_t_24 < 0) __pyx_t_24 += __pyx_v_dL.shape[1]; - __pyx_t_25 = (__pyx_v_k + 1); - __pyx_t_26 = __pyx_v_k; - if (__pyx_t_25 < 0) __pyx_t_25 += __pyx_v_L.shape[0]; - if (__pyx_t_26 < 0) __pyx_t_26 += __pyx_v_L.shape[1]; + __pyx_t_26 = (__pyx_v_k + 1); __pyx_t_27 = __pyx_v_k; - __pyx_t_28 = __pyx_v_k; - if (__pyx_t_27 < 0) __pyx_t_27 += __pyx_v_dL.shape[0]; - if (__pyx_t_28 < 0) __pyx_t_28 += __pyx_v_dL.shape[1]; - *((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL.data + __pyx_t_27 * __pyx_v_dL.strides[0]) )) + __pyx_t_28)) )) -= __pyx_f_5scipy_6linalg_11cython_blas_ddot((&__pyx_v_n), (&(*((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL.data + __pyx_t_23 * __pyx_v_dL.strides[0]) )) + __pyx_t_24)) )))), (&__pyx_v_N), (&(*((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_L.data + __pyx_t_25 * __pyx_v_L.strides[0]) )) + __pyx_t_26)) )))), (&__pyx_v_incx)); + if (__pyx_t_26 < 0) __pyx_t_26 += __pyx_v_dL.shape[0]; + if (__pyx_t_27 < 0) __pyx_t_27 += __pyx_v_dL.shape[1]; + __pyx_t_28 = (__pyx_v_k + 1); + __pyx_t_29 = __pyx_v_k; + if (__pyx_t_28 < 0) __pyx_t_28 += __pyx_v_L.shape[0]; + if (__pyx_t_29 < 0) __pyx_t_29 += __pyx_v_L.shape[1]; + __pyx_t_30 = __pyx_v_k; + __pyx_t_31 = __pyx_v_k; + if (__pyx_t_30 < 0) __pyx_t_30 += __pyx_v_dL.shape[0]; + if (__pyx_t_31 < 0) __pyx_t_31 += __pyx_v_dL.shape[1]; + *((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL.data + __pyx_t_30 * __pyx_v_dL.strides[0]) )) + __pyx_t_31)) )) -= __pyx_f_5scipy_6linalg_11cython_blas_ddot((&__pyx_v_n), (&(*((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL.data + __pyx_t_26 * __pyx_v_dL.strides[0]) )) + __pyx_t_27)) )))), (&__pyx_v_N), (&(*((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_L.data + __pyx_t_28 * __pyx_v_L.strides[0]) )) + __pyx_t_29)) )))), (&__pyx_v_incx)); - /* "GPy/util/choleskies_cython.pyx":106 + /* "GPy/util/choleskies_cython.pyx":108 * # * dL[k, k] -= cblas.ddot(&n, &dL[k + 1, k], &N, &L[k+1, k], &incx) * dL[k, k] /= (2.0 * L[k, k]) # <<<<<<<<<<<<<< * * def backprop_gradient_par_c(double[:, :] dL, double[:, :] L): */ - __pyx_t_29 = __pyx_v_k; - __pyx_t_30 = __pyx_v_k; - if (__pyx_t_29 < 0) __pyx_t_29 += __pyx_v_L.shape[0]; - if (__pyx_t_30 < 0) __pyx_t_30 += __pyx_v_L.shape[1]; - __pyx_t_31 = __pyx_v_k; __pyx_t_32 = __pyx_v_k; - if (__pyx_t_31 < 0) __pyx_t_31 += __pyx_v_dL.shape[0]; - if (__pyx_t_32 < 0) __pyx_t_32 += __pyx_v_dL.shape[1]; - *((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL.data + __pyx_t_31 * __pyx_v_dL.strides[0]) )) + __pyx_t_32)) )) /= (2.0 * (*((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_L.data + __pyx_t_29 * __pyx_v_L.strides[0]) )) + __pyx_t_30)) )))); + __pyx_t_33 = __pyx_v_k; + if (__pyx_t_32 < 0) __pyx_t_32 += __pyx_v_L.shape[0]; + if (__pyx_t_33 < 0) __pyx_t_33 += __pyx_v_L.shape[1]; + __pyx_t_34 = __pyx_v_k; + __pyx_t_35 = __pyx_v_k; + if (__pyx_t_34 < 0) __pyx_t_34 += __pyx_v_dL.shape[0]; + if (__pyx_t_35 < 0) __pyx_t_35 += __pyx_v_dL.shape[1]; + *((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_dL.data + __pyx_t_34 * __pyx_v_dL.strides[0]) )) + __pyx_t_35)) )) /= (2.0 * (*((double *) ( /* dim=1 */ ((char *) (((double *) ( /* dim=0 */ (__pyx_v_L.data + __pyx_t_32 * __pyx_v_L.strides[0]) )) + __pyx_t_33)) )))); } - /* "GPy/util/choleskies_cython.pyx":83 + /* "GPy/util/choleskies_cython.pyx":85 * return dL_dK * * cdef void chol_backprop(int N, double[:, ::1] dL, double[:, ::1] L) nogil: # <<<<<<<<<<<<<< @@ -3530,11 +4262,11 @@ static void __pyx_f_3GPy_4util_17choleskies_cython_chol_backprop(int __pyx_v_N, /* function exit code */ goto __pyx_L0; __pyx_L1_error:; - __Pyx_WriteUnraisable("GPy.util.choleskies_cython.chol_backprop", __pyx_clineno, __pyx_lineno, __pyx_filename, 0); + __Pyx_WriteUnraisable("GPy.util.choleskies_cython.chol_backprop", __pyx_clineno, __pyx_lineno, __pyx_filename, 1, 1); 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- /* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":222 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":279 * * info.buf = PyArray_DATA(self) * info.ndim = ndim # <<<<<<<<<<<<<< - * if copy_shape: + * if sizeof(npy_intp) != sizeof(Py_ssize_t): * # Allocate new buffer for strides and shape info. */ __pyx_v_info->ndim = __pyx_v_ndim; - /* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":223 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":280 * info.buf = PyArray_DATA(self) * info.ndim = ndim - * if copy_shape: # <<<<<<<<<<<<<< + * if sizeof(npy_intp) != sizeof(Py_ssize_t): # <<<<<<<<<<<<<< * # Allocate new buffer for strides and shape info. * # This is allocated as one block, strides first. */ - __pyx_t_1 = (__pyx_v_copy_shape != 0); + __pyx_t_1 = (((sizeof(npy_intp)) != (sizeof(Py_ssize_t))) != 0); if (__pyx_t_1) { - /* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":226 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":283 * # Allocate new buffer for strides and shape info. * # This is allocated as one block, strides first. - * info.strides = stdlib.malloc(sizeof(Py_ssize_t) * ndim * 2) # <<<<<<<<<<<<<< + * info.strides = PyObject_Malloc(sizeof(Py_ssize_t) * 2 * ndim) # <<<<<<<<<<<<<< * info.shape = info.strides + ndim * for i in range(ndim): */ - __pyx_v_info->strides = ((Py_ssize_t *)malloc((((sizeof(Py_ssize_t)) * ((size_t)__pyx_v_ndim)) * 2))); + __pyx_v_info->strides = ((Py_ssize_t *)PyObject_Malloc((((sizeof(Py_ssize_t)) * 2) * ((size_t)__pyx_v_ndim)))); - /* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":227 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":284 * # This is allocated as one block, strides first. - * info.strides = stdlib.malloc(sizeof(Py_ssize_t) * ndim * 2) + * info.strides = PyObject_Malloc(sizeof(Py_ssize_t) * 2 * ndim) * info.shape = info.strides + ndim # <<<<<<<<<<<<<< * for i in range(ndim): * info.strides[i] = PyArray_STRIDES(self)[i] */ __pyx_v_info->shape = (__pyx_v_info->strides + __pyx_v_ndim); - /* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":228 - * info.strides = stdlib.malloc(sizeof(Py_ssize_t) * ndim * 2) + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":285 + * info.strides = PyObject_Malloc(sizeof(Py_ssize_t) * 2 * ndim) * info.shape = info.strides + ndim * for i in range(ndim): # <<<<<<<<<<<<<< * info.strides[i] = PyArray_STRIDES(self)[i] * info.shape[i] = PyArray_DIMS(self)[i] */ __pyx_t_4 = __pyx_v_ndim; - for (__pyx_t_5 = 0; __pyx_t_5 < __pyx_t_4; __pyx_t_5+=1) { - __pyx_v_i = __pyx_t_5; + __pyx_t_5 = __pyx_t_4; + for (__pyx_t_6 = 0; __pyx_t_6 < __pyx_t_5; __pyx_t_6+=1) { + __pyx_v_i = __pyx_t_6; - /* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":229 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":286 * info.shape = info.strides + ndim * for i in range(ndim): * info.strides[i] = PyArray_STRIDES(self)[i] # <<<<<<<<<<<<<< @@ -4111,7 +4788,7 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ (__pyx_v_info->strides[__pyx_v_i]) = (PyArray_STRIDES(__pyx_v_self)[__pyx_v_i]); - /* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":230 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":287 * for i in range(ndim): * info.strides[i] = PyArray_STRIDES(self)[i] * info.shape[i] = PyArray_DIMS(self)[i] # <<<<<<<<<<<<<< @@ -4120,20 +4797,28 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ (__pyx_v_info->shape[__pyx_v_i]) = (PyArray_DIMS(__pyx_v_self)[__pyx_v_i]); } - goto __pyx_L11; - } - /*else*/ { - /* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":232 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":280 + * info.buf = PyArray_DATA(self) + * info.ndim = ndim + * if sizeof(npy_intp) != sizeof(Py_ssize_t): # <<<<<<<<<<<<<< + * # Allocate new buffer for strides and shape info. + * # This is allocated as one block, strides first. + */ + goto __pyx_L9; + } + + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":289 * info.shape[i] = PyArray_DIMS(self)[i] * else: * info.strides = PyArray_STRIDES(self) # <<<<<<<<<<<<<< * info.shape = PyArray_DIMS(self) * info.suboffsets = NULL */ + /*else*/ { __pyx_v_info->strides = ((Py_ssize_t *)PyArray_STRIDES(__pyx_v_self)); - /* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":233 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":290 * else: * info.strides = PyArray_STRIDES(self) * info.shape = PyArray_DIMS(self) # <<<<<<<<<<<<<< @@ -4142,9 +4827,9 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ __pyx_v_info->shape = ((Py_ssize_t *)PyArray_DIMS(__pyx_v_self)); } - __pyx_L11:; + __pyx_L9:; - /* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":234 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":291 * info.strides = PyArray_STRIDES(self) * info.shape = PyArray_DIMS(self) * info.suboffsets = NULL # <<<<<<<<<<<<<< @@ -4153,7 +4838,7 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ __pyx_v_info->suboffsets = NULL; - /* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":235 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":292 * info.shape = PyArray_DIMS(self) * info.suboffsets = NULL * info.itemsize = PyArray_ITEMSIZE(self) # <<<<<<<<<<<<<< @@ -4162,7 +4847,7 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ __pyx_v_info->itemsize = PyArray_ITEMSIZE(__pyx_v_self); - /* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":236 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":293 * info.suboffsets = NULL * info.itemsize = PyArray_ITEMSIZE(self) * info.readonly = not PyArray_ISWRITEABLE(self) # <<<<<<<<<<<<<< @@ -4171,100 +4856,54 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ __pyx_v_info->readonly = (!(PyArray_ISWRITEABLE(__pyx_v_self) != 0)); - /* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":239 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":296 * * cdef int t * cdef char* f = NULL # <<<<<<<<<<<<<< - * cdef dtype descr = self.descr - * cdef list stack + * cdef dtype descr = PyArray_DESCR(self) + * cdef int offset */ __pyx_v_f = NULL; - /* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":240 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":297 * cdef int t * cdef char* f = NULL - * cdef dtype descr = self.descr # <<<<<<<<<<<<<< - * cdef list stack + * cdef dtype descr = PyArray_DESCR(self) # <<<<<<<<<<<<<< * cdef int offset + * */ - __pyx_t_3 = ((PyObject *)__pyx_v_self->descr); + __pyx_t_7 = PyArray_DESCR(__pyx_v_self); + __pyx_t_3 = ((PyObject *)__pyx_t_7); __Pyx_INCREF(__pyx_t_3); __pyx_v_descr = ((PyArray_Descr *)__pyx_t_3); __pyx_t_3 = 0; - /* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":244 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":300 * cdef int offset * - * cdef bint hasfields = PyDataType_HASFIELDS(descr) # <<<<<<<<<<<<<< + * info.obj = self # <<<<<<<<<<<<<< * - * if not hasfields and not copy_shape: + * if not PyDataType_HASFIELDS(descr): */ - __pyx_v_hasfields = PyDataType_HASFIELDS(__pyx_v_descr); + __Pyx_INCREF(((PyObject *)__pyx_v_self)); + __Pyx_GIVEREF(((PyObject *)__pyx_v_self)); + __Pyx_GOTREF(__pyx_v_info->obj); + __Pyx_DECREF(__pyx_v_info->obj); + __pyx_v_info->obj = ((PyObject *)__pyx_v_self); - /* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":246 - * cdef bint hasfields = PyDataType_HASFIELDS(descr) + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":302 + * info.obj = self * - * if not hasfields and not copy_shape: # <<<<<<<<<<<<<< - * # do not call releasebuffer - * info.obj = None - */ - __pyx_t_2 = ((!(__pyx_v_hasfields != 0)) != 0); - if (__pyx_t_2) { - goto __pyx_L16_next_and; - } else { - __pyx_t_1 = __pyx_t_2; - goto __pyx_L15_bool_binop_done; - } - __pyx_L16_next_and:; - __pyx_t_2 = ((!(__pyx_v_copy_shape != 0)) != 0); - __pyx_t_1 = __pyx_t_2; - __pyx_L15_bool_binop_done:; - if (__pyx_t_1) { - - /* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":248 - * if not hasfields and not copy_shape: - * # do not call releasebuffer - * info.obj = None # <<<<<<<<<<<<<< - * else: - * # need to call releasebuffer - */ - __Pyx_INCREF(Py_None); - __Pyx_GIVEREF(Py_None); - __Pyx_GOTREF(__pyx_v_info->obj); - __Pyx_DECREF(__pyx_v_info->obj); - __pyx_v_info->obj = Py_None; - goto __pyx_L14; - } - /*else*/ { - - /* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":251 - * else: - * # need to call releasebuffer - * info.obj = self # <<<<<<<<<<<<<< - * - * if not hasfields: - */ - __Pyx_INCREF(((PyObject *)__pyx_v_self)); - __Pyx_GIVEREF(((PyObject *)__pyx_v_self)); - __Pyx_GOTREF(__pyx_v_info->obj); - __Pyx_DECREF(__pyx_v_info->obj); - __pyx_v_info->obj = ((PyObject *)__pyx_v_self); - } - __pyx_L14:; - - /* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":253 - * info.obj = self - * - * if not hasfields: # <<<<<<<<<<<<<< + * if not PyDataType_HASFIELDS(descr): # <<<<<<<<<<<<<< * t = descr.type_num * if ((descr.byteorder == c'>' and little_endian) or */ - __pyx_t_1 = ((!(__pyx_v_hasfields != 0)) != 0); + __pyx_t_1 = ((!(PyDataType_HASFIELDS(__pyx_v_descr) != 0)) != 0); if (__pyx_t_1) { - /* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":254 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":303 * - * if not hasfields: + * if not PyDataType_HASFIELDS(descr): * t = descr.type_num # <<<<<<<<<<<<<< * if ((descr.byteorder == c'>' and little_endian) or * (descr.byteorder == c'<' and not little_endian)): @@ -4272,8 +4911,8 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P __pyx_t_4 = __pyx_v_descr->type_num; __pyx_v_t = __pyx_t_4; - /* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":255 - * if not hasfields: + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":304 + * if not PyDataType_HASFIELDS(descr): * t = descr.type_num * if ((descr.byteorder == c'>' and little_endian) or # <<<<<<<<<<<<<< * (descr.byteorder == c'<' and not little_endian)): @@ -4281,21 +4920,18 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ __pyx_t_2 = ((__pyx_v_descr->byteorder == '>') != 0); if (!__pyx_t_2) { - goto __pyx_L20_next_or; + goto __pyx_L15_next_or; } else { - goto __pyx_L21_next_and; } - __pyx_L21_next_and:; __pyx_t_2 = (__pyx_v_little_endian != 0); if (!__pyx_t_2) { - goto __pyx_L20_next_or; } else { __pyx_t_1 = __pyx_t_2; - goto __pyx_L19_bool_binop_done; + goto __pyx_L14_bool_binop_done; } - __pyx_L20_next_or:; + __pyx_L15_next_or:; - /* "../../../../anaconda/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":256 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":305 * t = descr.type_num * if ((descr.byteorder == c'>' and little_endian) or * (descr.byteorder == c'<' and not little_endian)): # <<<<<<<<<<<<<< @@ -4304,255 +4940,256 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ __pyx_t_2 = ((__pyx_v_descr->byteorder == '<') != 0); 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__pyx_t_3 = 0; - {__pyx_filename = __pyx_f[2]; __pyx_lineno = 170; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_10 = __Pyx_PyObject_Call(__pyx_builtin_MemoryError, __pyx_tuple__11, NULL); if (unlikely(!__pyx_t_10)) __PYX_ERR(2, 176, __pyx_L1_error) + __Pyx_GOTREF(__pyx_t_10); + __Pyx_Raise(__pyx_t_10, 0, 0, 0); + __Pyx_DECREF(__pyx_t_10); __pyx_t_10 = 0; + __PYX_ERR(2, 176, __pyx_L1_error) + + /* "View.MemoryView":175 + * + * self.data = malloc(self.len) + * if not self.data: # <<<<<<<<<<<<<< + * raise MemoryError("unable to allocate array data.") + * + */ } - /* "View.MemoryView":172 + /* "View.MemoryView":178 * raise MemoryError("unable to allocate array data.") * * if self.dtype_is_object: # <<<<<<<<<<<<<< @@ -6433,7 +7606,7 @@ static int __pyx_array_MemoryView_5array___cinit__(struct __pyx_array_obj *__pyx __pyx_t_4 = (__pyx_v_self->dtype_is_object != 0); if (__pyx_t_4) { - /* "View.MemoryView":173 + /* "View.MemoryView":179 * * if self.dtype_is_object: * p = self.data 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flags) * if self.view.obj == NULL: */ - __pyx_t_2 = (((PyObject *)Py_TYPE(((PyObject *)__pyx_v_self))) == ((PyObject *)((PyObject *)__pyx_memoryview_type))); + __pyx_t_2 = (((PyObject *)Py_TYPE(((PyObject *)__pyx_v_self))) == ((PyObject *)__pyx_memoryview_type)); __pyx_t_3 = (__pyx_t_2 != 0); if (!__pyx_t_3) { - goto __pyx_L5_next_or; } else { __pyx_t_1 = __pyx_t_3; goto __pyx_L4_bool_binop_done; } - __pyx_L5_next_or:; __pyx_t_3 = (__pyx_v_obj != Py_None); __pyx_t_2 = (__pyx_t_3 != 0); __pyx_t_1 = __pyx_t_2; __pyx_L4_bool_binop_done:; if (__pyx_t_1) { - /* "View.MemoryView":321 + /* "View.MemoryView":349 * self.flags = flags * if type(self) is memoryview or obj is not None: * __Pyx_GetBuffer(obj, &self.view, flags) # <<<<<<<<<<<<<< * if self.view.obj == NULL: * (<__pyx_buffer *> &self.view).obj = Py_None */ - __pyx_t_4 = __Pyx_GetBuffer(__pyx_v_obj, (&__pyx_v_self->view), __pyx_v_flags); if (unlikely(__pyx_t_4 == -1)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 321; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = __Pyx_GetBuffer(__pyx_v_obj, (&__pyx_v_self->view), __pyx_v_flags); if (unlikely(__pyx_t_4 == ((int)-1))) __PYX_ERR(2, 349, __pyx_L1_error) - /* "View.MemoryView":322 + /* "View.MemoryView":350 * if type(self) is memoryview or obj is not None: * __Pyx_GetBuffer(obj, &self.view, flags) * if self.view.obj == NULL: # <<<<<<<<<<<<<< @@ -7747,7 +9456,7 @@ static int __pyx_memoryview_MemoryView_10memoryview___cinit__(struct __pyx_memor __pyx_t_1 = ((((PyObject *)__pyx_v_self->view.obj) == NULL) != 0); if (__pyx_t_1) { - /* "View.MemoryView":323 + /* "View.MemoryView":351 * __Pyx_GetBuffer(obj, &self.view, flags) * if self.view.obj == NULL: * (<__pyx_buffer *> &self.view).obj = Py_None # <<<<<<<<<<<<<< @@ -7756,90 +9465,177 @@ static int __pyx_memoryview_MemoryView_10memoryview___cinit__(struct __pyx_memor */ ((Py_buffer *)(&__pyx_v_self->view))->obj = Py_None; - /* "View.MemoryView":324 + /* "View.MemoryView":352 * if self.view.obj == NULL: * (<__pyx_buffer *> &self.view).obj = Py_None * Py_INCREF(Py_None) # <<<<<<<<<<<<<< * - * self.lock = PyThread_allocate_lock() + * global __pyx_memoryview_thread_locks_used */ Py_INCREF(Py_None); - goto __pyx_L6; - } - __pyx_L6:; - goto __pyx_L3; - } - __pyx_L3:; - /* "View.MemoryView":326 + /* "View.MemoryView":350 + * if type(self) is memoryview or obj is not None: + * __Pyx_GetBuffer(obj, &self.view, flags) + * if self.view.obj == NULL: # <<<<<<<<<<<<<< + * (<__pyx_buffer *> &self.view).obj = Py_None * Py_INCREF(Py_None) - * - * self.lock = PyThread_allocate_lock() # <<<<<<<<<<<<<< - * if self.lock == NULL: - * raise MemoryError */ - __pyx_v_self->lock = PyThread_allocate_lock(); + } - /* "View.MemoryView":327 + /* "View.MemoryView":348 + * self.obj = obj + * self.flags = flags + * if type(self) is memoryview or obj is not None: # <<<<<<<<<<<<<< + * __Pyx_GetBuffer(obj, &self.view, flags) + * if self.view.obj == NULL: + */ + } + + /* "View.MemoryView":355 * - * self.lock = PyThread_allocate_lock() - * if self.lock == NULL: # <<<<<<<<<<<<<< - * raise MemoryError + * global __pyx_memoryview_thread_locks_used + * if __pyx_memoryview_thread_locks_used < THREAD_LOCKS_PREALLOCATED: # <<<<<<<<<<<<<< + * self.lock = __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used] + * __pyx_memoryview_thread_locks_used += 1 + */ + __pyx_t_1 = ((__pyx_memoryview_thread_locks_used < 8) != 0); + if (__pyx_t_1) { + + /* "View.MemoryView":356 + * global __pyx_memoryview_thread_locks_used + * if __pyx_memoryview_thread_locks_used < THREAD_LOCKS_PREALLOCATED: + * self.lock = __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used] # <<<<<<<<<<<<<< + * __pyx_memoryview_thread_locks_used += 1 + * if self.lock is NULL: + */ + __pyx_v_self->lock = (__pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used]); + + /* "View.MemoryView":357 + * if __pyx_memoryview_thread_locks_used < THREAD_LOCKS_PREALLOCATED: + * self.lock = __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used] + * __pyx_memoryview_thread_locks_used += 1 # <<<<<<<<<<<<<< + * if self.lock is NULL: + * self.lock = PyThread_allocate_lock() + */ + __pyx_memoryview_thread_locks_used = (__pyx_memoryview_thread_locks_used + 1); + + /* "View.MemoryView":355 * + * global __pyx_memoryview_thread_locks_used + * if __pyx_memoryview_thread_locks_used < THREAD_LOCKS_PREALLOCATED: # <<<<<<<<<<<<<< + * self.lock = __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used] + * __pyx_memoryview_thread_locks_used += 1 + */ + } + + /* "View.MemoryView":358 + * self.lock = __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used] + * __pyx_memoryview_thread_locks_used += 1 + * if self.lock is NULL: # <<<<<<<<<<<<<< + * self.lock = PyThread_allocate_lock() + * if self.lock is NULL: */ __pyx_t_1 = ((__pyx_v_self->lock == NULL) != 0); if (__pyx_t_1) { - /* "View.MemoryView":328 - * self.lock = PyThread_allocate_lock() - * if self.lock == NULL: - * raise MemoryError # <<<<<<<<<<<<<< + /* "View.MemoryView":359 + * __pyx_memoryview_thread_locks_used += 1 + * if self.lock is NULL: + * self.lock = PyThread_allocate_lock() # <<<<<<<<<<<<<< + * if self.lock is NULL: + * raise MemoryError + */ + __pyx_v_self->lock = PyThread_allocate_lock(); + + /* "View.MemoryView":360 + * if self.lock is NULL: + * self.lock = PyThread_allocate_lock() + * if self.lock is NULL: # <<<<<<<<<<<<<< + * raise MemoryError + * + */ + __pyx_t_1 = ((__pyx_v_self->lock == NULL) != 0); + if (unlikely(__pyx_t_1)) { + + /* "View.MemoryView":361 + * self.lock = PyThread_allocate_lock() + * if self.lock is NULL: + * raise MemoryError # <<<<<<<<<<<<<< * * if flags & PyBUF_FORMAT: */ - PyErr_NoMemory(); {__pyx_filename = __pyx_f[2]; __pyx_lineno = 328; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + PyErr_NoMemory(); __PYX_ERR(2, 361, __pyx_L1_error) + + /* "View.MemoryView":360 + * if self.lock is NULL: + * self.lock = PyThread_allocate_lock() + * if self.lock is NULL: # <<<<<<<<<<<<<< + * raise MemoryError + * + */ + } + + /* "View.MemoryView":358 + * self.lock = __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used] + * __pyx_memoryview_thread_locks_used += 1 + * if self.lock is NULL: # <<<<<<<<<<<<<< + * self.lock = PyThread_allocate_lock() + * if self.lock is NULL: + */ } - /* "View.MemoryView":330 - * raise MemoryError + /* "View.MemoryView":363 + * raise MemoryError * * if flags & PyBUF_FORMAT: # <<<<<<<<<<<<<< - * self.dtype_is_object = self.view.format == b'O' + * self.dtype_is_object = (self.view.format[0] == b'O' and self.view.format[1] == b'\0') * else: */ __pyx_t_1 = ((__pyx_v_flags & PyBUF_FORMAT) != 0); if (__pyx_t_1) { - /* "View.MemoryView":331 + /* "View.MemoryView":364 * * if flags & PyBUF_FORMAT: - * self.dtype_is_object = self.view.format == b'O' # <<<<<<<<<<<<<< + * self.dtype_is_object = (self.view.format[0] == b'O' and self.view.format[1] == b'\0') # <<<<<<<<<<<<<< * else: * self.dtype_is_object = dtype_is_object */ - __pyx_t_5 = __Pyx_PyBytes_FromString(__pyx_v_self->view.format); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 331; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __Pyx_GOTREF(__pyx_t_5); - __pyx_t_6 = PyObject_RichCompare(__pyx_t_5, __pyx_n_b_O, Py_EQ); __Pyx_XGOTREF(__pyx_t_6); if (unlikely(!__pyx_t_6)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 331; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __Pyx_DECREF(__pyx_t_5); __pyx_t_5 = 0; - __pyx_t_1 = __Pyx_PyObject_IsTrue(__pyx_t_6); if (unlikely((__pyx_t_1 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 331; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __Pyx_DECREF(__pyx_t_6); __pyx_t_6 = 0; + __pyx_t_2 = (((__pyx_v_self->view.format[0]) == 'O') != 0); + if (__pyx_t_2) { + } else { + __pyx_t_1 = __pyx_t_2; + goto __pyx_L11_bool_binop_done; + } + __pyx_t_2 = (((__pyx_v_self->view.format[1]) == '\x00') != 0); + __pyx_t_1 = __pyx_t_2; + __pyx_L11_bool_binop_done:; __pyx_v_self->dtype_is_object = __pyx_t_1; - goto __pyx_L8; - } - /*else*/ { - /* "View.MemoryView":333 - * self.dtype_is_object = self.view.format == b'O' + /* "View.MemoryView":363 + * raise MemoryError + * + * if flags & PyBUF_FORMAT: # <<<<<<<<<<<<<< + * self.dtype_is_object = (self.view.format[0] == b'O' and self.view.format[1] == b'\0') + * else: + */ + goto __pyx_L10; + } + + /* "View.MemoryView":366 + * self.dtype_is_object = (self.view.format[0] == b'O' and self.view.format[1] == b'\0') * else: * self.dtype_is_object = dtype_is_object # <<<<<<<<<<<<<< * * self.acquisition_count_aligned_p = <__pyx_atomic_int *> align_pointer( */ + /*else*/ { __pyx_v_self->dtype_is_object = __pyx_v_dtype_is_object; } - __pyx_L8:; + __pyx_L10:; - /* "View.MemoryView":335 + /* "View.MemoryView":368 * self.dtype_is_object = dtype_is_object * * self.acquisition_count_aligned_p = <__pyx_atomic_int *> align_pointer( # <<<<<<<<<<<<<< @@ -7848,7 +9644,7 @@ static int 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__pyx_memoryview_obj *__pyx_v_self) { +static void __pyx_memoryview___pyx_pf_15View_dot_MemoryView_10memoryview_2__dealloc__(struct __pyx_memoryview_obj *__pyx_v_self) { + int __pyx_v_i; __Pyx_RefNannyDeclarations int __pyx_t_1; int __pyx_t_2; + int __pyx_t_3; + int __pyx_t_4; + int __pyx_t_5; + PyThread_type_lock __pyx_t_6; + PyThread_type_lock __pyx_t_7; __Pyx_RefNannySetupContext("__dealloc__", 0); - /* "View.MemoryView":340 + /* "View.MemoryView":373 * * def __dealloc__(memoryview self): * if self.obj is not None: # <<<<<<<<<<<<<< @@ -7914,41 +9714,145 @@ static void __pyx_memoryview_MemoryView_10memoryview_2__dealloc__(struct __pyx_m __pyx_t_2 = (__pyx_t_1 != 0); if (__pyx_t_2) { - /* "View.MemoryView":341 + /* "View.MemoryView":374 * def __dealloc__(memoryview self): * if self.obj is not None: * __Pyx_ReleaseBuffer(&self.view) # <<<<<<<<<<<<<< * - * if self.lock != NULL: + * cdef int i */ __Pyx_ReleaseBuffer((&__pyx_v_self->view)); - goto __pyx_L3; - } - __pyx_L3:; - /* 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__pyx_t_4; __pyx_t_5+=1) { + __pyx_v_i = __pyx_t_5; + + /* "View.MemoryView":380 + * if self.lock != NULL: + * for i in range(__pyx_memoryview_thread_locks_used): + * if __pyx_memoryview_thread_locks[i] is self.lock: # <<<<<<<<<<<<<< + * __pyx_memoryview_thread_locks_used -= 1 + * if i != __pyx_memoryview_thread_locks_used: + */ + __pyx_t_2 = (((__pyx_memoryview_thread_locks[__pyx_v_i]) == __pyx_v_self->lock) != 0); + if (__pyx_t_2) { + + /* "View.MemoryView":381 + * for i in range(__pyx_memoryview_thread_locks_used): + * if __pyx_memoryview_thread_locks[i] is self.lock: + * __pyx_memoryview_thread_locks_used -= 1 # <<<<<<<<<<<<<< + * if i != __pyx_memoryview_thread_locks_used: + * __pyx_memoryview_thread_locks[i], __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used] = ( + */ + __pyx_memoryview_thread_locks_used = (__pyx_memoryview_thread_locks_used - 1); + + /* "View.MemoryView":382 + * if __pyx_memoryview_thread_locks[i] is self.lock: + * __pyx_memoryview_thread_locks_used -= 1 + * if i != __pyx_memoryview_thread_locks_used: # <<<<<<<<<<<<<< + * __pyx_memoryview_thread_locks[i], __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used] = ( + * __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used], __pyx_memoryview_thread_locks[i]) + */ + __pyx_t_2 = ((__pyx_v_i != __pyx_memoryview_thread_locks_used) != 0); + if (__pyx_t_2) { + + /* "View.MemoryView":384 + * if i != __pyx_memoryview_thread_locks_used: + * __pyx_memoryview_thread_locks[i], __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used] = ( + * __pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used], __pyx_memoryview_thread_locks[i]) # <<<<<<<<<<<<<< + * break + * else: + */ + __pyx_t_6 = (__pyx_memoryview_thread_locks[__pyx_memoryview_thread_locks_used]); + __pyx_t_7 = (__pyx_memoryview_thread_locks[__pyx_v_i]); + + /* "View.MemoryView":383 + * __pyx_memoryview_thread_locks_used -= 1 + * if i != 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__pyx_memoryview_obj *__pyx_v_ __Pyx_XGIVEREF(__pyx_t_5); __Pyx_ExceptionReset(__pyx_t_3, __pyx_t_4, __pyx_t_5); goto __pyx_L0; - __pyx_L11_try_end:; + __pyx_L9_try_end:; } - goto __pyx_L3; - } - __pyx_L3:; - /* "View.MemoryView":389 + /* "View.MemoryView":428 + * + * cdef is_slice(self, obj): + * if not isinstance(obj, memoryview): # <<<<<<<<<<<<<< + * try: + * obj = memoryview(obj, self.flags & ~PyBUF_WRITABLE | PyBUF_ANY_CONTIGUOUS, + */ + } + + /* "View.MemoryView":435 * return None * * return obj # <<<<<<<<<<<<<< @@ -8622,7 +10595,7 @@ static PyObject *__pyx_memoryview_is_slice(struct __pyx_memoryview_obj *__pyx_v_ __pyx_r = __pyx_v_obj; goto __pyx_L0; - /* "View.MemoryView":381 + /* "View.MemoryView":427 * self.setitem_indexed(index, value) * * cdef is_slice(self, obj): # <<<<<<<<<<<<<< @@ -8644,7 +10617,7 @@ static PyObject *__pyx_memoryview_is_slice(struct __pyx_memoryview_obj *__pyx_v_ return __pyx_r; } -/* "View.MemoryView":391 +/* "View.MemoryView":437 * return obj * * cdef 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397; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_PyObject_GetAttrStr(__pyx_v_src, __pyx_n_s_ndim); if (unlikely(!__pyx_t_1)) __PYX_ERR(2, 443, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_1); - __pyx_t_2 = __Pyx_PyInt_As_int(__pyx_t_1); if (unlikely((__pyx_t_2 == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 397; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = __Pyx_PyInt_As_int(__pyx_t_1); if (unlikely((__pyx_t_2 == (int)-1) && PyErr_Occurred())) __PYX_ERR(2, 443, __pyx_L1_error) __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - __pyx_t_1 = __Pyx_PyObject_GetAttrStr(__pyx_v_dst, __pyx_n_s_ndim); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 397; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_PyObject_GetAttrStr(__pyx_v_dst, __pyx_n_s_ndim); if (unlikely(!__pyx_t_1)) __PYX_ERR(2, 443, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_1); - __pyx_t_3 = __Pyx_PyInt_As_int(__pyx_t_1); if 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__pyx_lineno = 395; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_4 = __pyx_memoryview_copy_contents((__pyx_memoryview_get_slice_from_memoryview(((struct __pyx_memoryview_obj *)__pyx_v_src), (&__pyx_v_src_slice))[0]), (__pyx_memoryview_get_slice_from_memoryview(((struct __pyx_memoryview_obj *)__pyx_v_dst), (&__pyx_v_dst_slice))[0]), __pyx_t_2, __pyx_t_3, __pyx_v_self->dtype_is_object); if (unlikely(__pyx_t_4 == ((int)-1))) __PYX_ERR(2, 441, __pyx_L1_error) - /* "View.MemoryView":391 + /* "View.MemoryView":437 * return obj * * cdef setitem_slice_assignment(self, dst, src): # <<<<<<<<<<<<<< @@ -8730,7 +10700,7 @@ static PyObject *__pyx_memoryview_setitem_slice_assignment(struct __pyx_memoryvi return __pyx_r; } -/* "View.MemoryView":399 +/* "View.MemoryView":445 * src.ndim, dst.ndim, self.dtype_is_object) * * cdef setitem_slice_assign_scalar(self, memoryview dst, value): # <<<<<<<<<<<<<< @@ -8739,7 +10709,7 @@ static PyObject *__pyx_memoryview_setitem_slice_assignment(struct 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/* "View.MemoryView":452 * cdef __Pyx_memviewslice *dst_slice * cdef __Pyx_memviewslice tmp_slice * dst_slice = get_slice_from_memview(dst, &tmp_slice) # <<<<<<<<<<<<<< @@ -8780,7 +10747,7 @@ static PyObject *__pyx_memoryview_setitem_slice_assign_scalar(struct __pyx_memor */ __pyx_v_dst_slice = __pyx_memoryview_get_slice_from_memoryview(__pyx_v_dst, (&__pyx_v_tmp_slice)); - /* "View.MemoryView":408 + /* "View.MemoryView":454 * dst_slice = get_slice_from_memview(dst, &tmp_slice) * * if self.view.itemsize > sizeof(array): # <<<<<<<<<<<<<< @@ -8790,7 +10757,7 @@ static PyObject *__pyx_memoryview_setitem_slice_assign_scalar(struct __pyx_memor __pyx_t_1 = ((((size_t)__pyx_v_self->view.itemsize) > (sizeof(__pyx_v_array))) != 0); if (__pyx_t_1) { - /* "View.MemoryView":409 + /* "View.MemoryView":455 * * if self.view.itemsize > sizeof(array): * tmp = PyMem_Malloc(self.view.itemsize) # <<<<<<<<<<<<<< @@ -8799,7 +10766,7 @@ static PyObject *__pyx_memoryview_setitem_slice_assign_scalar(struct __pyx_memor */ __pyx_v_tmp = PyMem_Malloc(__pyx_v_self->view.itemsize); - /* "View.MemoryView":410 + /* "View.MemoryView":456 * if self.view.itemsize > sizeof(array): * tmp = PyMem_Malloc(self.view.itemsize) * if tmp == NULL: # <<<<<<<<<<<<<< @@ -8807,19 +10774,27 @@ static PyObject *__pyx_memoryview_setitem_slice_assign_scalar(struct __pyx_memor * item = tmp */ __pyx_t_1 = ((__pyx_v_tmp == NULL) != 0); - if (__pyx_t_1) { + if (unlikely(__pyx_t_1)) { - /* "View.MemoryView":411 + /* "View.MemoryView":457 * tmp = PyMem_Malloc(self.view.itemsize) * if tmp == NULL: * raise MemoryError # <<<<<<<<<<<<<< * item = tmp * else: */ - PyErr_NoMemory(); {__pyx_filename = __pyx_f[2]; __pyx_lineno = 411; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + PyErr_NoMemory(); __PYX_ERR(2, 457, __pyx_L1_error) + + /* "View.MemoryView":456 + * if self.view.itemsize > sizeof(array): + * tmp = PyMem_Malloc(self.view.itemsize) + * if tmp == NULL: # <<<<<<<<<<<<<< + * raise MemoryError + * item = tmp + */ } - /* "View.MemoryView":412 + /* "View.MemoryView":458 * if tmp == NULL: * raise MemoryError * item = tmp # <<<<<<<<<<<<<< @@ -8827,22 +10802,30 @@ static PyObject *__pyx_memoryview_setitem_slice_assign_scalar(struct __pyx_memor * item = array */ __pyx_v_item = __pyx_v_tmp; + + /* "View.MemoryView":454 + * dst_slice = get_slice_from_memview(dst, &tmp_slice) + * + * if self.view.itemsize > sizeof(array): # <<<<<<<<<<<<<< + * tmp = PyMem_Malloc(self.view.itemsize) + * if tmp == NULL: + */ goto __pyx_L3; } - /*else*/ { - /* "View.MemoryView":414 + /* "View.MemoryView":460 * item = tmp * else: * item = array # <<<<<<<<<<<<<< * * try: */ + /*else*/ { __pyx_v_item = ((void *)__pyx_v_array); } __pyx_L3:; - /* "View.MemoryView":416 + /* "View.MemoryView":462 * item = array * * try: # <<<<<<<<<<<<<< @@ -8851,7 +10834,7 @@ static PyObject *__pyx_memoryview_setitem_slice_assign_scalar(struct __pyx_memor */ /*try:*/ { - /* "View.MemoryView":417 + /* "View.MemoryView":463 * * try: * if 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(unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 703; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_9 = PySequence_ITEM(__pyx_t_3, __pyx_t_7); __pyx_t_7++; if (unlikely(!__pyx_t_9)) __PYX_ERR(2, 742, __pyx_L1_error) + __Pyx_GOTREF(__pyx_t_9); #endif } } else { @@ -11994,8 +14233,8 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ if (unlikely(!__pyx_t_9)) { PyObject* exc_type = PyErr_Occurred(); if (exc_type) { - if (likely(exc_type == PyExc_StopIteration || PyErr_GivenExceptionMatches(exc_type, PyExc_StopIteration))) PyErr_Clear(); - else {__pyx_filename = __pyx_f[2]; __pyx_lineno = 703; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (likely(__Pyx_PyErr_GivenExceptionMatches(exc_type, PyExc_StopIteration))) PyErr_Clear(); + else __PYX_ERR(2, 742, __pyx_L1_error) } break; } @@ -12006,7 +14245,7 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ __pyx_v_dim = __pyx_t_6; __pyx_t_6 = 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PyErr_Occurred())) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 717; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_12 = __Pyx_PyIndex_AsSsize_t(__pyx_t_9); if (unlikely((__pyx_t_12 == (Py_ssize_t)-1) && PyErr_Occurred())) __PYX_ERR(2, 756, __pyx_L1_error) __pyx_t_10 = __pyx_t_12; __Pyx_DECREF(__pyx_t_9); __pyx_t_9 = 0; goto __pyx_L7_bool_binop_done; } - __pyx_L8_next_or:; __pyx_t_10 = 0; __pyx_L7_bool_binop_done:; __pyx_v_start = __pyx_t_10; - /* "View.MemoryView":718 + /* "View.MemoryView":757 * else: * start = index.start or 0 * stop = index.stop or 0 # <<<<<<<<<<<<<< * step = index.step or 0 * */ - __pyx_t_9 = __Pyx_PyObject_GetAttrStr(__pyx_v_index, __pyx_n_s_stop); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 718; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_9 = __Pyx_PyObject_GetAttrStr(__pyx_v_index, __pyx_n_s_stop); if (unlikely(!__pyx_t_9)) __PYX_ERR(2, 757, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_9); - __pyx_t_1 = 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__pyx_lineno = 719; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_12 = __Pyx_PyIndex_AsSsize_t(__pyx_t_9); if (unlikely((__pyx_t_12 == (Py_ssize_t)-1) && PyErr_Occurred())) __PYX_ERR(2, 758, __pyx_L1_error) __pyx_t_10 = __pyx_t_12; __Pyx_DECREF(__pyx_t_9); __pyx_t_9 = 0; goto __pyx_L11_bool_binop_done; } - __pyx_L12_next_or:; __pyx_t_10 = 0; __pyx_L11_bool_binop_done:; __pyx_v_step = __pyx_t_10; - /* "View.MemoryView":721 + /* "View.MemoryView":760 * step = index.step or 0 * * have_start = index.start is not None # <<<<<<<<<<<<<< * have_stop = index.stop is not None * have_step = index.step is not None */ - __pyx_t_9 = __Pyx_PyObject_GetAttrStr(__pyx_v_index, __pyx_n_s_start); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 721; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_9 = __Pyx_PyObject_GetAttrStr(__pyx_v_index, __pyx_n_s_start); if (unlikely(!__pyx_t_9)) __PYX_ERR(2, 760, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_9); __pyx_t_1 = 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__Pyx_PyObject_GetAttrStr(__pyx_v_index, __pyx_n_s_step); if (unlikely(!__pyx_t_9)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 723; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_9 = __Pyx_PyObject_GetAttrStr(__pyx_v_index, __pyx_n_s_step); if (unlikely(!__pyx_t_9)) __PYX_ERR(2, 762, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_9); __pyx_t_1 = (__pyx_t_9 != Py_None); __Pyx_DECREF(__pyx_t_9); __pyx_t_9 = 0; __pyx_v_have_step = __pyx_t_1; - /* "View.MemoryView":725 + /* "View.MemoryView":764 * have_step = index.step is not None * * slice_memviewslice( # <<<<<<<<<<<<<< * p_dst, p_src.shape[dim], p_src.strides[dim], p_src.suboffsets[dim], * dim, new_ndim, p_suboffset_dim, */ - __pyx_t_11 = __pyx_memoryview_slice_memviewslice(__pyx_v_p_dst, (__pyx_v_p_src->shape[__pyx_v_dim]), (__pyx_v_p_src->strides[__pyx_v_dim]), (__pyx_v_p_src->suboffsets[__pyx_v_dim]), __pyx_v_dim, __pyx_v_new_ndim, __pyx_v_p_suboffset_dim, __pyx_v_start, __pyx_v_stop, __pyx_v_step, __pyx_v_have_start, __pyx_v_have_stop, __pyx_v_have_step, 1); if (unlikely(__pyx_t_11 == -1)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 725; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_11 = __pyx_memoryview_slice_memviewslice(__pyx_v_p_dst, (__pyx_v_p_src->shape[__pyx_v_dim]), (__pyx_v_p_src->strides[__pyx_v_dim]), (__pyx_v_p_src->suboffsets[__pyx_v_dim]), __pyx_v_dim, __pyx_v_new_ndim, __pyx_v_p_suboffset_dim, __pyx_v_start, __pyx_v_stop, __pyx_v_step, __pyx_v_have_start, __pyx_v_have_stop, __pyx_v_have_step, 1); if (unlikely(__pyx_t_11 == ((int)-1))) __PYX_ERR(2, 764, __pyx_L1_error) - /* "View.MemoryView":731 + /* "View.MemoryView":770 * have_start, have_stop, have_step, * True) * new_ndim += 1 # <<<<<<<<<<<<<< @@ -12217,7 +14466,7 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ } __pyx_L6:; - /* "View.MemoryView":703 + /* "View.MemoryView":742 * cdef bint have_start, have_stop, have_step * * for dim, index in enumerate(indices): # <<<<<<<<<<<<<< @@ -12227,18 +14476,18 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ } __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - /* "View.MemoryView":733 + /* "View.MemoryView":772 * new_ndim += 1 * * if isinstance(memview, _memoryviewslice): # <<<<<<<<<<<<<< * return memoryview_fromslice(dst, new_ndim, * memviewsliceobj.to_object_func, */ - __pyx_t_1 = __Pyx_TypeCheck(((PyObject *)__pyx_v_memview), ((PyObject *)__pyx_memoryviewslice_type)); + __pyx_t_1 = __Pyx_TypeCheck(((PyObject *)__pyx_v_memview), __pyx_memoryviewslice_type); __pyx_t_2 = (__pyx_t_1 != 0); if (__pyx_t_2) { - /* "View.MemoryView":734 + /* "View.MemoryView":773 * * if isinstance(memview, _memoryviewslice): * return memoryview_fromslice(dst, new_ndim, # <<<<<<<<<<<<<< @@ -12247,73 +14496,81 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ */ __Pyx_XDECREF(((PyObject *)__pyx_r)); - /* "View.MemoryView":735 + /* "View.MemoryView":774 * if isinstance(memview, _memoryviewslice): * return memoryview_fromslice(dst, new_ndim, * memviewsliceobj.to_object_func, # <<<<<<<<<<<<<< * memviewsliceobj.to_dtype_func, * memview.dtype_is_object) */ - if (unlikely(!__pyx_v_memviewsliceobj)) { __Pyx_RaiseUnboundLocalError("memviewsliceobj"); {__pyx_filename = __pyx_f[2]; __pyx_lineno = 735; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } + if (unlikely(!__pyx_v_memviewsliceobj)) { __Pyx_RaiseUnboundLocalError("memviewsliceobj"); __PYX_ERR(2, 774, __pyx_L1_error) } - /* "View.MemoryView":736 + /* "View.MemoryView":775 * return memoryview_fromslice(dst, new_ndim, * memviewsliceobj.to_object_func, * memviewsliceobj.to_dtype_func, # <<<<<<<<<<<<<< * memview.dtype_is_object) * else: */ - if (unlikely(!__pyx_v_memviewsliceobj)) { __Pyx_RaiseUnboundLocalError("memviewsliceobj"); {__pyx_filename = __pyx_f[2]; __pyx_lineno = 736; __pyx_clineno = __LINE__; goto __pyx_L1_error;} } + if (unlikely(!__pyx_v_memviewsliceobj)) { __Pyx_RaiseUnboundLocalError("memviewsliceobj"); __PYX_ERR(2, 775, __pyx_L1_error) } - /* "View.MemoryView":734 + /* "View.MemoryView":773 * * if isinstance(memview, _memoryviewslice): * return memoryview_fromslice(dst, new_ndim, # <<<<<<<<<<<<<< * memviewsliceobj.to_object_func, * memviewsliceobj.to_dtype_func, */ - __pyx_t_3 = __pyx_memoryview_fromslice(__pyx_v_dst, __pyx_v_new_ndim, __pyx_v_memviewsliceobj->to_object_func, __pyx_v_memviewsliceobj->to_dtype_func, __pyx_v_memview->dtype_is_object); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 734; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = __pyx_memoryview_fromslice(__pyx_v_dst, __pyx_v_new_ndim, __pyx_v_memviewsliceobj->to_object_func, __pyx_v_memviewsliceobj->to_dtype_func, __pyx_v_memview->dtype_is_object); if (unlikely(!__pyx_t_3)) __PYX_ERR(2, 773, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_3); - if (!(likely(((__pyx_t_3) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_3, __pyx_memoryview_type))))) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 734; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (!(likely(((__pyx_t_3) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_3, __pyx_memoryview_type))))) __PYX_ERR(2, 773, __pyx_L1_error) __pyx_r = ((struct __pyx_memoryview_obj *)__pyx_t_3); __pyx_t_3 = 0; goto __pyx_L0; - } - /*else*/ { - /* "View.MemoryView":739 + /* "View.MemoryView":772 + * new_ndim += 1 + * + * if isinstance(memview, _memoryviewslice): # <<<<<<<<<<<<<< + * return memoryview_fromslice(dst, new_ndim, + * memviewsliceobj.to_object_func, + */ + } + + /* "View.MemoryView":778 * memview.dtype_is_object) * else: * return memoryview_fromslice(dst, new_ndim, NULL, NULL, # <<<<<<<<<<<<<< * memview.dtype_is_object) * */ + /*else*/ { __Pyx_XDECREF(((PyObject *)__pyx_r)); - /* "View.MemoryView":740 + /* "View.MemoryView":779 * else: * return memoryview_fromslice(dst, new_ndim, NULL, NULL, * memview.dtype_is_object) # <<<<<<<<<<<<<< * * */ - __pyx_t_3 = __pyx_memoryview_fromslice(__pyx_v_dst, __pyx_v_new_ndim, NULL, NULL, __pyx_v_memview->dtype_is_object); if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 739; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = __pyx_memoryview_fromslice(__pyx_v_dst, __pyx_v_new_ndim, NULL, NULL, __pyx_v_memview->dtype_is_object); if (unlikely(!__pyx_t_3)) __PYX_ERR(2, 778, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_3); - /* "View.MemoryView":739 + /* "View.MemoryView":778 * memview.dtype_is_object) * else: * return memoryview_fromslice(dst, new_ndim, NULL, NULL, # <<<<<<<<<<<<<< * memview.dtype_is_object) * */ - if (!(likely(((__pyx_t_3) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_3, __pyx_memoryview_type))))) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 739; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (!(likely(((__pyx_t_3) == Py_None) || likely(__Pyx_TypeTest(__pyx_t_3, __pyx_memoryview_type))))) __PYX_ERR(2, 778, __pyx_L1_error) __pyx_r = ((struct __pyx_memoryview_obj *)__pyx_t_3); __pyx_t_3 = 0; goto __pyx_L0; } - /* "View.MemoryView":667 + /* "View.MemoryView":706 * * @cname('__pyx_memview_slice') * cdef memoryview memview_slice(memoryview memview, object indices): # <<<<<<<<<<<<<< @@ -12335,7 +14592,7 @@ static struct __pyx_memoryview_obj *__pyx_memview_slice(struct __pyx_memoryview_ return __pyx_r; } -/* "View.MemoryView":764 +/* "View.MemoryView":803 * * @cname('__pyx_memoryview_slice_memviewslice') * cdef int slice_memviewslice( # <<<<<<<<<<<<<< @@ -12350,11 +14607,8 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, int __pyx_t_1; int __pyx_t_2; int __pyx_t_3; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; - /* "View.MemoryView":784 + /* "View.MemoryView":823 * cdef bint negative_step * * if not is_slice: # <<<<<<<<<<<<<< @@ -12364,7 +14618,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_1 = ((!(__pyx_v_is_slice != 0)) != 0); if (__pyx_t_1) { - /* "View.MemoryView":786 + /* "View.MemoryView":825 * if not is_slice: * * if start < 0: # <<<<<<<<<<<<<< @@ -12374,7 +14628,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_1 = ((__pyx_v_start < 0) != 0); if (__pyx_t_1) { - /* "View.MemoryView":787 + /* "View.MemoryView":826 * * if start < 0: * start += shape # <<<<<<<<<<<<<< @@ -12382,11 +14636,17 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, * _err_dim(IndexError, "Index out of bounds (axis %d)", dim) */ __pyx_v_start = (__pyx_v_start + __pyx_v_shape); - goto __pyx_L4; - } - __pyx_L4:; - /* "View.MemoryView":788 + /* "View.MemoryView":825 + * if not is_slice: + * + * if start < 0: # <<<<<<<<<<<<<< + * start += shape + * if not 0 <= start < shape: + */ + } + + /* "View.MemoryView":827 * if start < 0: * start += shape * if not 0 <= start < shape: # <<<<<<<<<<<<<< @@ -12400,42 +14660,54 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((!(__pyx_t_1 != 0)) != 0); if (__pyx_t_2) { - /* "View.MemoryView":789 + /* "View.MemoryView":828 * start += shape * if not 0 <= start < shape: * _err_dim(IndexError, "Index out of bounds (axis %d)", dim) # <<<<<<<<<<<<<< * else: * */ - __pyx_t_3 = __pyx_memoryview_err_dim(__pyx_builtin_IndexError, __pyx_k_Index_out_of_bounds_axis_d, __pyx_v_dim); if (unlikely(__pyx_t_3 == -1)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 789; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - goto __pyx_L5; + __pyx_t_3 = __pyx_memoryview_err_dim(__pyx_builtin_IndexError, ((char *)"Index out of bounds (axis %d)"), __pyx_v_dim); if (unlikely(__pyx_t_3 == ((int)-1))) __PYX_ERR(2, 828, __pyx_L1_error) + + /* "View.MemoryView":827 + * if start < 0: + * start += shape + * if not 0 <= start < shape: # <<<<<<<<<<<<<< + * _err_dim(IndexError, "Index out of bounds (axis %d)", dim) + * else: + */ } - __pyx_L5:; + + /* "View.MemoryView":823 + * cdef bint negative_step + * + * if not is_slice: # <<<<<<<<<<<<<< + * + * if start < 0: + */ goto __pyx_L3; } - /*else*/ { - /* "View.MemoryView":792 + /* "View.MemoryView":831 * else: * * negative_step = have_step != 0 and step < 0 # <<<<<<<<<<<<<< * * if have_step and step == 0: */ + /*else*/ { __pyx_t_1 = ((__pyx_v_have_step != 0) != 0); if (__pyx_t_1) { - goto __pyx_L7_next_and; } else { __pyx_t_2 = __pyx_t_1; goto __pyx_L6_bool_binop_done; } - __pyx_L7_next_and:; __pyx_t_1 = ((__pyx_v_step < 0) != 0); __pyx_t_2 = __pyx_t_1; __pyx_L6_bool_binop_done:; __pyx_v_negative_step = __pyx_t_2; - /* "View.MemoryView":794 + /* "View.MemoryView":833 * negative_step = have_step != 0 and step < 0 * * if have_step and step == 0: # <<<<<<<<<<<<<< @@ -12444,30 +14716,34 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ __pyx_t_1 = (__pyx_v_have_step != 0); if (__pyx_t_1) { - goto __pyx_L10_next_and; } else { __pyx_t_2 = __pyx_t_1; goto __pyx_L9_bool_binop_done; } - __pyx_L10_next_and:; __pyx_t_1 = ((__pyx_v_step == 0) != 0); __pyx_t_2 = __pyx_t_1; __pyx_L9_bool_binop_done:; if (__pyx_t_2) { - /* "View.MemoryView":795 + /* "View.MemoryView":834 * * if have_step and step == 0: * _err_dim(ValueError, "Step may not be zero (axis %d)", dim) # <<<<<<<<<<<<<< * * */ - __pyx_t_3 = __pyx_memoryview_err_dim(__pyx_builtin_ValueError, __pyx_k_Step_may_not_be_zero_axis_d, __pyx_v_dim); if (unlikely(__pyx_t_3 == -1)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 795; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - goto __pyx_L8; - } - __pyx_L8:; + __pyx_t_3 = __pyx_memoryview_err_dim(__pyx_builtin_ValueError, ((char *)"Step may not be zero (axis %d)"), __pyx_v_dim); if (unlikely(__pyx_t_3 == ((int)-1))) __PYX_ERR(2, 834, __pyx_L1_error) - /* "View.MemoryView":798 + /* "View.MemoryView":833 + * negative_step = have_step != 0 and step < 0 + * + * if have_step and step == 0: # <<<<<<<<<<<<<< + * _err_dim(ValueError, "Step may not be zero (axis %d)", dim) + * + */ + } + + /* "View.MemoryView":837 * * * if have_start: # <<<<<<<<<<<<<< @@ -12477,7 +14753,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = (__pyx_v_have_start != 0); if (__pyx_t_2) { - /* "View.MemoryView":799 + /* "View.MemoryView":838 * * if have_start: * if start < 0: # <<<<<<<<<<<<<< @@ -12487,7 +14763,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((__pyx_v_start < 0) != 0); if (__pyx_t_2) { - /* "View.MemoryView":800 + /* "View.MemoryView":839 * if have_start: * if start < 0: * start += shape # <<<<<<<<<<<<<< @@ -12496,7 +14772,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ __pyx_v_start = (__pyx_v_start + __pyx_v_shape); - /* "View.MemoryView":801 + /* "View.MemoryView":840 * if start < 0: * start += shape * if start < 0: # <<<<<<<<<<<<<< @@ -12506,7 +14782,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((__pyx_v_start < 0) != 0); if (__pyx_t_2) { - /* "View.MemoryView":802 + /* "View.MemoryView":841 * start += shape * if start < 0: * start = 0 # <<<<<<<<<<<<<< @@ -12514,13 +14790,27 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, * if negative_step: */ __pyx_v_start = 0; - goto __pyx_L13; + + /* "View.MemoryView":840 + * if start < 0: + * start += shape + * if start < 0: # <<<<<<<<<<<<<< + * start = 0 + * elif start >= shape: + */ } - __pyx_L13:; + + /* "View.MemoryView":838 + * + * if have_start: + * if start < 0: # <<<<<<<<<<<<<< + * start += shape + * if start < 0: + */ goto __pyx_L12; } - /* "View.MemoryView":803 + /* "View.MemoryView":842 * if start < 0: * start = 0 * elif start >= shape: # <<<<<<<<<<<<<< @@ -12530,7 +14820,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((__pyx_v_start >= __pyx_v_shape) != 0); if (__pyx_t_2) { - /* "View.MemoryView":804 + /* "View.MemoryView":843 * start = 0 * elif start >= shape: * if negative_step: # <<<<<<<<<<<<<< @@ -12540,7 +14830,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = (__pyx_v_negative_step != 0); if (__pyx_t_2) { - /* "View.MemoryView":805 + /* "View.MemoryView":844 * elif start >= shape: * if negative_step: * start = shape - 1 # <<<<<<<<<<<<<< @@ -12548,38 +14838,61 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, * start = shape */ __pyx_v_start = (__pyx_v_shape - 1); + + /* "View.MemoryView":843 + * start = 0 + * elif start >= shape: + * if negative_step: # <<<<<<<<<<<<<< + * start = shape - 1 + * else: + */ goto __pyx_L14; } - /*else*/ { - /* "View.MemoryView":807 + /* "View.MemoryView":846 * start = shape - 1 * else: * start = shape # <<<<<<<<<<<<<< * else: * if negative_step: */ + /*else*/ { __pyx_v_start = __pyx_v_shape; } __pyx_L14:; - goto __pyx_L12; + + /* "View.MemoryView":842 + * if start < 0: + * start = 0 + * elif start >= shape: # <<<<<<<<<<<<<< + * if negative_step: + * start = shape - 1 + */ } __pyx_L12:; + + /* "View.MemoryView":837 + * + * + * if have_start: # <<<<<<<<<<<<<< + * if start < 0: + * start += shape + */ goto __pyx_L11; } - /*else*/ { - /* "View.MemoryView":809 + /* "View.MemoryView":848 * start = shape * else: * if negative_step: # <<<<<<<<<<<<<< * start = shape - 1 * else: */ + /*else*/ { __pyx_t_2 = (__pyx_v_negative_step != 0); if (__pyx_t_2) { - /* "View.MemoryView":810 + /* "View.MemoryView":849 * else: * if negative_step: * start = shape - 1 # <<<<<<<<<<<<<< @@ -12587,24 +14900,32 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, * start = 0 */ __pyx_v_start = (__pyx_v_shape - 1); + + /* "View.MemoryView":848 + * start = shape + * else: + * if negative_step: # <<<<<<<<<<<<<< + * start = shape - 1 + * else: + */ goto __pyx_L15; } - /*else*/ { - /* "View.MemoryView":812 + /* "View.MemoryView":851 * start = shape - 1 * else: * start = 0 # <<<<<<<<<<<<<< * * if have_stop: */ + /*else*/ { __pyx_v_start = 0; } __pyx_L15:; } __pyx_L11:; - /* "View.MemoryView":814 + /* "View.MemoryView":853 * start = 0 * * if have_stop: # <<<<<<<<<<<<<< @@ -12614,7 +14935,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = (__pyx_v_have_stop != 0); if (__pyx_t_2) { - /* "View.MemoryView":815 + /* "View.MemoryView":854 * * if have_stop: * if stop < 0: # <<<<<<<<<<<<<< @@ -12624,7 +14945,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((__pyx_v_stop < 0) != 0); if (__pyx_t_2) { - /* "View.MemoryView":816 + /* "View.MemoryView":855 * if have_stop: * if stop < 0: * stop += shape # <<<<<<<<<<<<<< @@ -12633,7 +14954,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ __pyx_v_stop = (__pyx_v_stop + __pyx_v_shape); - /* "View.MemoryView":817 + /* "View.MemoryView":856 * if stop < 0: * stop += shape * if stop < 0: # <<<<<<<<<<<<<< @@ -12643,7 +14964,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((__pyx_v_stop < 0) != 0); if (__pyx_t_2) { - /* "View.MemoryView":818 + /* "View.MemoryView":857 * stop += shape * if stop < 0: * stop = 0 # <<<<<<<<<<<<<< @@ -12651,13 +14972,27 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, * stop = shape */ __pyx_v_stop = 0; - goto __pyx_L18; + + /* "View.MemoryView":856 + * if stop < 0: + * stop += shape + * if stop < 0: # <<<<<<<<<<<<<< + * stop = 0 + * elif stop > shape: + */ } - __pyx_L18:; + + /* "View.MemoryView":854 + * + * if have_stop: + * if stop < 0: # <<<<<<<<<<<<<< + * stop += shape + * if stop < 0: + */ goto __pyx_L17; } - /* "View.MemoryView":819 + /* "View.MemoryView":858 * if stop < 0: * stop = 0 * elif stop > shape: # <<<<<<<<<<<<<< @@ -12667,7 +15002,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((__pyx_v_stop > __pyx_v_shape) != 0); if (__pyx_t_2) { - /* "View.MemoryView":820 + /* "View.MemoryView":859 * stop = 0 * elif stop > shape: * stop = shape # <<<<<<<<<<<<<< @@ -12675,49 +15010,72 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, * if negative_step: */ __pyx_v_stop = __pyx_v_shape; - goto __pyx_L17; + + /* "View.MemoryView":858 + * if stop < 0: + * stop = 0 + * elif stop > shape: # <<<<<<<<<<<<<< + * stop = shape + * else: + */ } __pyx_L17:; + + /* "View.MemoryView":853 + * start = 0 + * + * if have_stop: # <<<<<<<<<<<<<< + * if stop < 0: + * stop += shape + */ goto __pyx_L16; } - /*else*/ { - /* "View.MemoryView":822 + /* "View.MemoryView":861 * stop = shape * else: * if negative_step: # <<<<<<<<<<<<<< * stop = -1 * else: */ + /*else*/ { __pyx_t_2 = (__pyx_v_negative_step != 0); if (__pyx_t_2) { - /* "View.MemoryView":823 + /* "View.MemoryView":862 * else: * if negative_step: * stop = -1 # <<<<<<<<<<<<<< * else: * stop = shape */ - __pyx_v_stop = -1; + __pyx_v_stop = -1L; + + /* "View.MemoryView":861 + * stop = shape + * else: + * if negative_step: # <<<<<<<<<<<<<< + * stop = -1 + * else: + */ goto __pyx_L19; } - /*else*/ { - /* "View.MemoryView":825 + /* "View.MemoryView":864 * stop = -1 * else: * stop = shape # <<<<<<<<<<<<<< * * if not have_step: */ + /*else*/ { __pyx_v_stop = __pyx_v_shape; } __pyx_L19:; } __pyx_L16:; - /* "View.MemoryView":827 + /* "View.MemoryView":866 * stop = shape * * if not have_step: # <<<<<<<<<<<<<< @@ -12727,7 +15085,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((!(__pyx_v_have_step != 0)) != 0); if (__pyx_t_2) { - /* "View.MemoryView":828 + /* "View.MemoryView":867 * * if not have_step: * step = 1 # <<<<<<<<<<<<<< @@ -12735,11 +15093,17 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, * */ __pyx_v_step = 1; - goto __pyx_L20; - } - __pyx_L20:; - /* "View.MemoryView":832 + /* "View.MemoryView":866 + * stop = shape + * + * if not have_step: # <<<<<<<<<<<<<< + * step = 1 + * + */ + } + + /* "View.MemoryView":871 * * with cython.cdivision(True): * new_shape = (stop - start) // step # <<<<<<<<<<<<<< @@ -12748,7 +15112,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ __pyx_v_new_shape = ((__pyx_v_stop - __pyx_v_start) / __pyx_v_step); - /* "View.MemoryView":834 + /* "View.MemoryView":873 * new_shape = (stop - start) // step * * if (stop - start) - step * new_shape: # <<<<<<<<<<<<<< @@ -12758,7 +15122,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = (((__pyx_v_stop - __pyx_v_start) - (__pyx_v_step * __pyx_v_new_shape)) != 0); if (__pyx_t_2) { - /* "View.MemoryView":835 + /* "View.MemoryView":874 * * if (stop - start) - step * new_shape: * new_shape += 1 # <<<<<<<<<<<<<< @@ -12766,11 +15130,17 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, * if new_shape < 0: */ __pyx_v_new_shape = (__pyx_v_new_shape + 1); - goto __pyx_L21; - } - __pyx_L21:; - /* "View.MemoryView":837 + /* "View.MemoryView":873 + * new_shape = (stop - start) // step + * + * if (stop - start) - step * new_shape: # <<<<<<<<<<<<<< + * new_shape += 1 + * + */ + } + + /* "View.MemoryView":876 * new_shape += 1 * * if new_shape < 0: # <<<<<<<<<<<<<< @@ -12780,7 +15150,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((__pyx_v_new_shape < 0) != 0); if (__pyx_t_2) { - /* "View.MemoryView":838 + /* "View.MemoryView":877 * * if new_shape < 0: * new_shape = 0 # <<<<<<<<<<<<<< @@ -12788,11 +15158,17 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, * */ __pyx_v_new_shape = 0; - goto __pyx_L22; - } - __pyx_L22:; - /* "View.MemoryView":841 + /* "View.MemoryView":876 + * new_shape += 1 + * + * if new_shape < 0: # <<<<<<<<<<<<<< + * new_shape = 0 + * + */ + } + + /* "View.MemoryView":880 * * * dst.strides[new_ndim] = stride * step # <<<<<<<<<<<<<< @@ -12801,7 +15177,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ (__pyx_v_dst->strides[__pyx_v_new_ndim]) = (__pyx_v_stride * __pyx_v_step); - /* "View.MemoryView":842 + /* "View.MemoryView":881 * * dst.strides[new_ndim] = stride * step * dst.shape[new_ndim] = new_shape # <<<<<<<<<<<<<< @@ -12810,7 +15186,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, */ (__pyx_v_dst->shape[__pyx_v_new_ndim]) = __pyx_v_new_shape; - /* "View.MemoryView":843 + /* "View.MemoryView":882 * dst.strides[new_ndim] = stride * step * dst.shape[new_ndim] = new_shape * dst.suboffsets[new_ndim] = suboffset # <<<<<<<<<<<<<< @@ -12821,7 +15197,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, } __pyx_L3:; - /* "View.MemoryView":846 + /* "View.MemoryView":885 * * * if suboffset_dim[0] < 0: # <<<<<<<<<<<<<< @@ -12831,7 +15207,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = (((__pyx_v_suboffset_dim[0]) < 0) != 0); if (__pyx_t_2) { - /* "View.MemoryView":847 + /* "View.MemoryView":886 * * if suboffset_dim[0] < 0: * dst.data += start * stride # <<<<<<<<<<<<<< @@ -12839,23 +15215,31 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, * dst.suboffsets[suboffset_dim[0]] += start * stride */ __pyx_v_dst->data = (__pyx_v_dst->data + (__pyx_v_start * __pyx_v_stride)); + + /* "View.MemoryView":885 + * + * + * if suboffset_dim[0] < 0: # <<<<<<<<<<<<<< + * dst.data += start * stride + * else: + */ goto __pyx_L23; } - /*else*/ { - /* "View.MemoryView":849 + /* "View.MemoryView":888 * dst.data += start * stride * else: * dst.suboffsets[suboffset_dim[0]] += start * stride # <<<<<<<<<<<<<< * * if suboffset >= 0: */ + /*else*/ { __pyx_t_3 = (__pyx_v_suboffset_dim[0]); (__pyx_v_dst->suboffsets[__pyx_t_3]) = ((__pyx_v_dst->suboffsets[__pyx_t_3]) + (__pyx_v_start * __pyx_v_stride)); } __pyx_L23:; - /* "View.MemoryView":851 + /* "View.MemoryView":890 * dst.suboffsets[suboffset_dim[0]] += start * stride * * if suboffset >= 0: # <<<<<<<<<<<<<< @@ -12865,7 +15249,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((__pyx_v_suboffset >= 0) != 0); if (__pyx_t_2) { - /* "View.MemoryView":852 + /* "View.MemoryView":891 * * if suboffset >= 0: * if not is_slice: # <<<<<<<<<<<<<< @@ -12875,7 +15259,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((!(__pyx_v_is_slice != 0)) != 0); if (__pyx_t_2) { - /* "View.MemoryView":853 + /* "View.MemoryView":892 * if suboffset >= 0: * if not is_slice: * if new_ndim == 0: # <<<<<<<<<<<<<< @@ -12885,7 +15269,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_t_2 = ((__pyx_v_new_ndim == 0) != 0); if (__pyx_t_2) { - /* "View.MemoryView":854 + /* "View.MemoryView":893 * if not is_slice: * if new_ndim == 0: * dst.data = ( dst.data)[0] + suboffset # <<<<<<<<<<<<<< @@ -12893,39 +15277,69 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, * _err_dim(IndexError, "All dimensions preceding dimension %d " */ __pyx_v_dst->data = ((((char **)__pyx_v_dst->data)[0]) + __pyx_v_suboffset); + + /* "View.MemoryView":892 + * if suboffset >= 0: + * if not is_slice: + * if new_ndim == 0: # <<<<<<<<<<<<<< + * dst.data = ( dst.data)[0] + suboffset + * else: + */ goto __pyx_L26; } - /*else*/ { - /* "View.MemoryView":856 + /* "View.MemoryView":895 * dst.data = ( dst.data)[0] + suboffset * else: * _err_dim(IndexError, "All dimensions preceding dimension %d " # <<<<<<<<<<<<<< * "must be indexed and not sliced", dim) * else: */ - __pyx_t_3 = __pyx_memoryview_err_dim(__pyx_builtin_IndexError, __pyx_k_All_dimensions_preceding_dimensi, __pyx_v_dim); if (unlikely(__pyx_t_3 == -1)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 856; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + /*else*/ { + + /* "View.MemoryView":896 + * else: + * _err_dim(IndexError, "All dimensions preceding dimension %d " + * "must be indexed and not sliced", dim) # <<<<<<<<<<<<<< + * else: + * suboffset_dim[0] = new_ndim + */ + __pyx_t_3 = __pyx_memoryview_err_dim(__pyx_builtin_IndexError, ((char *)"All dimensions preceding dimension %d must be indexed and not sliced"), __pyx_v_dim); if (unlikely(__pyx_t_3 == ((int)-1))) __PYX_ERR(2, 895, __pyx_L1_error) } __pyx_L26:; + + /* "View.MemoryView":891 + * + * if suboffset >= 0: + * if not is_slice: # <<<<<<<<<<<<<< + * if new_ndim == 0: + * dst.data = ( dst.data)[0] + suboffset + */ goto __pyx_L25; } - /*else*/ { - /* "View.MemoryView":859 + /* "View.MemoryView":898 * "must be indexed and not sliced", dim) * else: * suboffset_dim[0] = new_ndim # <<<<<<<<<<<<<< * * return 0 */ + /*else*/ { (__pyx_v_suboffset_dim[0]) = __pyx_v_new_ndim; } __pyx_L25:; - goto __pyx_L24; - } - __pyx_L24:; - /* "View.MemoryView":861 + /* "View.MemoryView":890 + * dst.suboffsets[suboffset_dim[0]] += start * stride + * + * if suboffset >= 0: # <<<<<<<<<<<<<< + * if not is_slice: + * if new_ndim == 0: + */ + } + + /* "View.MemoryView":900 * suboffset_dim[0] = new_ndim * * return 0 # <<<<<<<<<<<<<< @@ -12935,7 +15349,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_r = 0; goto __pyx_L0; - /* "View.MemoryView":764 + /* "View.MemoryView":803 * * @cname('__pyx_memoryview_slice_memviewslice') * cdef int slice_memviewslice( # <<<<<<<<<<<<<< @@ -12947,11 +15361,11 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, __pyx_L1_error:; { #ifdef WITH_THREAD - PyGILState_STATE __pyx_gilstate_save = PyGILState_Ensure(); + PyGILState_STATE __pyx_gilstate_save = __Pyx_PyGILState_Ensure(); #endif __Pyx_AddTraceback("View.MemoryView.slice_memviewslice", __pyx_clineno, __pyx_lineno, __pyx_filename); #ifdef WITH_THREAD - PyGILState_Release(__pyx_gilstate_save); + __Pyx_PyGILState_Release(__pyx_gilstate_save); #endif } __pyx_r = -1; @@ -12959,7 +15373,7 @@ static int __pyx_memoryview_slice_memviewslice(__Pyx_memviewslice *__pyx_v_dst, return __pyx_r; } -/* "View.MemoryView":867 +/* "View.MemoryView":906 * * @cname('__pyx_pybuffer_index') * cdef char *pybuffer_index(Py_buffer *view, char *bufp, Py_ssize_t index, # <<<<<<<<<<<<<< @@ -12979,21 +15393,18 @@ static char *__pyx_pybuffer_index(Py_buffer *__pyx_v_view, char *__pyx_v_bufp, P int __pyx_t_2; PyObject *__pyx_t_3 = NULL; PyObject *__pyx_t_4 = NULL; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; __Pyx_RefNannySetupContext("pybuffer_index", 0); - /* "View.MemoryView":869 + /* "View.MemoryView":908 * cdef char *pybuffer_index(Py_buffer *view, char *bufp, Py_ssize_t index, * Py_ssize_t dim) except NULL: * cdef Py_ssize_t shape, stride, suboffset = -1 # <<<<<<<<<<<<<< * cdef 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__pyx_t_3 = 0; + __PYX_ERR(2, 924, __pyx_L1_error) - /* "View.MemoryView":887 + /* "View.MemoryView":923 + * if index < 0: + * index += view.shape[dim] + * if index < 0: # <<<<<<<<<<<<<< + * raise IndexError("Out of bounds on buffer access (axis %d)" % dim) + * + */ + } + + /* "View.MemoryView":921 + * suboffset = view.suboffsets[dim] + * + * if index < 0: # <<<<<<<<<<<<<< + * index += view.shape[dim] + * if index < 0: + */ + } + + /* "View.MemoryView":926 * raise IndexError("Out of bounds on buffer access (axis %d)" % dim) * * if index >= shape: # <<<<<<<<<<<<<< @@ -13161,34 +15583,37 @@ static char *__pyx_pybuffer_index(Py_buffer *__pyx_v_view, char *__pyx_v_bufp, P * */ __pyx_t_2 = ((__pyx_v_index >= __pyx_v_shape) != 0); - if (__pyx_t_2) { + if (unlikely(__pyx_t_2)) { - /* "View.MemoryView":888 + /* "View.MemoryView":927 * * if index >= shape: * raise IndexError("Out of bounds on buffer access (axis %d)" % dim) # <<<<<<<<<<<<<< * * resultp = bufp + index * stride */ - __pyx_t_4 = 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(((__pyx_v_memslice->suboffsets[__pyx_v_j]) >= 0) != 0); + __pyx_t_7 = __pyx_t_8; __pyx_L6_bool_binop_done:; - if (__pyx_t_6) { + if (__pyx_t_7) { - /* "View.MemoryView":914 + /* "View.MemoryView":953 * * if memslice.suboffsets[i] >= 0 or memslice.suboffsets[j] >= 0: * _err(ValueError, "Cannot transpose memoryview with indirect dimensions") # <<<<<<<<<<<<<< * * return 1 */ - __pyx_t_8 = __pyx_memoryview_err(__pyx_builtin_ValueError, __pyx_k_Cannot_transpose_memoryview_with); if (unlikely(__pyx_t_8 == -1)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 914; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - goto __pyx_L5; + __pyx_t_9 = __pyx_memoryview_err(__pyx_builtin_ValueError, ((char *)"Cannot transpose memoryview with indirect dimensions")); if (unlikely(__pyx_t_9 == ((int)-1))) __PYX_ERR(2, 953, __pyx_L1_error) + + /* "View.MemoryView":952 + * shape[i], shape[j] = shape[j], shape[i] + * + * if memslice.suboffsets[i] >= 0 or memslice.suboffsets[j] >= 0: # <<<<<<<<<<<<<< + * 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PyObject *), int __pyx_v_dtype_is_object) { struct __pyx_memoryviewslice_obj *__pyx_v_result = 0; - int __pyx_v_i; + Py_ssize_t __pyx_v_suboffset; + PyObject *__pyx_v_length = NULL; PyObject *__pyx_r = NULL; __Pyx_RefNannyDeclarations int __pyx_t_1; @@ -13684,16 +16236,14 @@ static PyObject *__pyx_memoryview_fromslice(__Pyx_memviewslice __pyx_v_memviewsl PyObject *__pyx_t_3 = NULL; __Pyx_TypeInfo *__pyx_t_4; Py_buffer __pyx_t_5; - Py_ssize_t __pyx_t_6; - int __pyx_t_7; - int __pyx_t_8; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; + Py_ssize_t *__pyx_t_6; + Py_ssize_t *__pyx_t_7; + Py_ssize_t *__pyx_t_8; + Py_ssize_t __pyx_t_9; __Pyx_RefNannySetupContext("memoryview_fromslice", 0); - /* "View.MemoryView":966 - * cdef int i + /* "View.MemoryView":1003 + * cdef _memoryviewslice result * * if memviewslice.memview == Py_None: # <<<<<<<<<<<<<< * return None @@ -13702,7 +16252,7 @@ static PyObject *__pyx_memoryview_fromslice(__Pyx_memviewslice 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__pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_2 = __Pyx_PyObject_Call(((PyObject *)__pyx_memoryviewslice_type), __pyx_t_3, NULL); if (unlikely(!__pyx_t_2)) __PYX_ERR(2, 1009, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_2); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; __pyx_v_result = ((struct __pyx_memoryviewslice_obj *)__pyx_t_2); __pyx_t_2 = 0; - /* "View.MemoryView":974 + /* "View.MemoryView":1011 * result = _memoryviewslice(None, 0, dtype_is_object) * * result.from_slice = memviewslice # <<<<<<<<<<<<<< @@ -13750,7 +16307,7 @@ static PyObject *__pyx_memoryview_fromslice(__Pyx_memviewslice __pyx_v_memviewsl */ __pyx_v_result->from_slice = __pyx_v_memviewslice; - /* "View.MemoryView":975 + /* "View.MemoryView":1012 * * result.from_slice = memviewslice * __PYX_INC_MEMVIEW(&memviewslice, 1) # <<<<<<<<<<<<<< @@ -13759,14 +16316,14 @@ static PyObject *__pyx_memoryview_fromslice(__Pyx_memviewslice __pyx_v_memviewsl */ __PYX_INC_MEMVIEW((&__pyx_v_memviewslice), 1); - /* 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_memoryviewslice): # <<<<<<<<<<<<<< + * obj = memview + * return &obj.from_slice + */ + } + + /* "View.MemoryView":1055 * return &obj.from_slice * else: * slice_copy(memview, mslice) # <<<<<<<<<<<<<< * return mslice * */ + /*else*/ { __pyx_memoryview_slice_copy(__pyx_v_memview, __pyx_v_mslice); - /* "View.MemoryView":1010 + /* "View.MemoryView":1056 * else: * slice_copy(memview, mslice) * return mslice # <<<<<<<<<<<<<< @@ -14024,7 +16681,7 @@ static __Pyx_memviewslice *__pyx_memoryview_get_slice_from_memoryview(struct __p goto __pyx_L0; } - /* "View.MemoryView":1002 + /* "View.MemoryView":1048 * * @cname('__pyx_memoryview_get_slice_from_memoryview') * cdef __Pyx_memviewslice *get_slice_from_memview(memoryview memview, # <<<<<<<<<<<<<< @@ -14035,7 +16692,7 @@ static __Pyx_memviewslice *__pyx_memoryview_get_slice_from_memoryview(struct __p /* function exit code */ __pyx_L1_error:; __Pyx_XDECREF(__pyx_t_3); - __Pyx_WriteUnraisable("View.MemoryView.get_slice_from_memview", __pyx_clineno, __pyx_lineno, __pyx_filename, 0); + __Pyx_WriteUnraisable("View.MemoryView.get_slice_from_memview", __pyx_clineno, __pyx_lineno, __pyx_filename, 1, 0); __pyx_r = 0; __pyx_L0:; __Pyx_XDECREF((PyObject *)__pyx_v_obj); @@ -14043,7 +16700,7 @@ static __Pyx_memviewslice *__pyx_memoryview_get_slice_from_memoryview(struct __p return __pyx_r; } -/* "View.MemoryView":1013 +/* "View.MemoryView":1059 * * @cname('__pyx_memoryview_slice_copy') * cdef void slice_copy(memoryview memview, __Pyx_memviewslice *dst): # <<<<<<<<<<<<<< @@ -14061,9 +16718,10 @@ static void __pyx_memoryview_slice_copy(struct __pyx_memoryview_obj *__pyx_v_mem int __pyx_t_2; int __pyx_t_3; int __pyx_t_4; + Py_ssize_t __pyx_t_5; __Pyx_RefNannySetupContext("slice_copy", 0); - /* "View.MemoryView":1017 + /* "View.MemoryView":1063 * cdef (Py_ssize_t*) shape, strides, suboffsets * * shape = memview.view.shape # <<<<<<<<<<<<<< @@ -14073,7 +16731,7 @@ static void __pyx_memoryview_slice_copy(struct __pyx_memoryview_obj *__pyx_v_mem __pyx_t_1 = __pyx_v_memview->view.shape; __pyx_v_shape = __pyx_t_1; - /* "View.MemoryView":1018 + /* "View.MemoryView":1064 * * shape = memview.view.shape * strides = memview.view.strides # <<<<<<<<<<<<<< @@ -14083,7 +16741,7 @@ static void __pyx_memoryview_slice_copy(struct __pyx_memoryview_obj *__pyx_v_mem __pyx_t_1 = __pyx_v_memview->view.strides; __pyx_v_strides = __pyx_t_1; - /* "View.MemoryView":1019 + /* "View.MemoryView":1065 * shape = memview.view.shape * strides = memview.view.strides * suboffsets = memview.view.suboffsets # <<<<<<<<<<<<<< @@ -14093,7 +16751,7 @@ static void __pyx_memoryview_slice_copy(struct __pyx_memoryview_obj *__pyx_v_mem __pyx_t_1 = __pyx_v_memview->view.suboffsets; __pyx_v_suboffsets = __pyx_t_1; - /* "View.MemoryView":1021 + /* "View.MemoryView":1067 * suboffsets = memview.view.suboffsets * * dst.memview = <__pyx_memoryview *> memview # <<<<<<<<<<<<<< @@ -14102,7 +16760,7 @@ static void __pyx_memoryview_slice_copy(struct __pyx_memoryview_obj *__pyx_v_mem */ __pyx_v_dst->memview = ((struct __pyx_memoryview_obj *)__pyx_v_memview); - /* "View.MemoryView":1022 + /* "View.MemoryView":1068 * * dst.memview = <__pyx_memoryview *> memview * dst.data = memview.view.buf # <<<<<<<<<<<<<< @@ -14111,7 +16769,7 @@ static void __pyx_memoryview_slice_copy(struct __pyx_memoryview_obj *__pyx_v_mem */ __pyx_v_dst->data = ((char *)__pyx_v_memview->view.buf); - /* "View.MemoryView":1024 + /* "View.MemoryView":1070 * dst.data = memview.view.buf * * for dim in range(memview.view.ndim): # <<<<<<<<<<<<<< @@ -14119,62 +16777,44 @@ static void __pyx_memoryview_slice_copy(struct __pyx_memoryview_obj *__pyx_v_mem * dst.strides[dim] = strides[dim] */ __pyx_t_2 = __pyx_v_memview->view.ndim; - for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) { - __pyx_v_dim = __pyx_t_3; + __pyx_t_3 = __pyx_t_2; + for (__pyx_t_4 = 0; __pyx_t_4 < __pyx_t_3; __pyx_t_4+=1) { + __pyx_v_dim = __pyx_t_4; - /* "View.MemoryView":1025 + /* "View.MemoryView":1071 * * for dim in range(memview.view.ndim): * dst.shape[dim] = shape[dim] # <<<<<<<<<<<<<< * dst.strides[dim] = strides[dim] - * if suboffsets == NULL: + * dst.suboffsets[dim] = suboffsets[dim] if suboffsets else -1 */ (__pyx_v_dst->shape[__pyx_v_dim]) = (__pyx_v_shape[__pyx_v_dim]); - /* "View.MemoryView":1026 + /* "View.MemoryView":1072 * for dim in range(memview.view.ndim): * dst.shape[dim] = shape[dim] * dst.strides[dim] = strides[dim] # <<<<<<<<<<<<<< - * if suboffsets == NULL: - * dst.suboffsets[dim] = -1 + * dst.suboffsets[dim] = suboffsets[dim] if suboffsets else -1 + * */ (__pyx_v_dst->strides[__pyx_v_dim]) = (__pyx_v_strides[__pyx_v_dim]); - /* "View.MemoryView":1027 + /* "View.MemoryView":1073 * dst.shape[dim] = shape[dim] * dst.strides[dim] = strides[dim] - * if suboffsets == NULL: # <<<<<<<<<<<<<< - * dst.suboffsets[dim] = -1 - * else: - */ - __pyx_t_4 = ((__pyx_v_suboffsets == NULL) != 0); - if (__pyx_t_4) { - - /* "View.MemoryView":1028 - * dst.strides[dim] = strides[dim] - * if suboffsets == NULL: - * dst.suboffsets[dim] = -1 # <<<<<<<<<<<<<< - * else: - * dst.suboffsets[dim] = suboffsets[dim] - */ - (__pyx_v_dst->suboffsets[__pyx_v_dim]) = -1; - goto __pyx_L5; - } - /*else*/ { - - /* "View.MemoryView":1030 - * dst.suboffsets[dim] = -1 - * else: - * dst.suboffsets[dim] = suboffsets[dim] # <<<<<<<<<<<<<< + * dst.suboffsets[dim] = suboffsets[dim] if suboffsets else -1 # <<<<<<<<<<<<<< * * @cname('__pyx_memoryview_copy_object') */ - (__pyx_v_dst->suboffsets[__pyx_v_dim]) = (__pyx_v_suboffsets[__pyx_v_dim]); + if ((__pyx_v_suboffsets != 0)) { + __pyx_t_5 = (__pyx_v_suboffsets[__pyx_v_dim]); + } else { + __pyx_t_5 = -1L; } - __pyx_L5:; + (__pyx_v_dst->suboffsets[__pyx_v_dim]) = __pyx_t_5; } - /* "View.MemoryView":1013 + /* "View.MemoryView":1059 * * @cname('__pyx_memoryview_slice_copy') * cdef void slice_copy(memoryview memview, __Pyx_memviewslice *dst): # <<<<<<<<<<<<<< @@ -14186,7 +16826,7 @@ static void __pyx_memoryview_slice_copy(struct __pyx_memoryview_obj *__pyx_v_mem __Pyx_RefNannyFinishContext(); } -/* "View.MemoryView":1033 +/* "View.MemoryView":1076 * * @cname('__pyx_memoryview_copy_object') * cdef memoryview_copy(memoryview memview): # <<<<<<<<<<<<<< @@ -14199,12 +16839,9 @@ static PyObject *__pyx_memoryview_copy_object(struct __pyx_memoryview_obj *__pyx PyObject *__pyx_r = NULL; __Pyx_RefNannyDeclarations PyObject *__pyx_t_1 = NULL; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; __Pyx_RefNannySetupContext("memoryview_copy", 0); - /* "View.MemoryView":1036 + /* "View.MemoryView":1079 * "Create a new memoryview object" * cdef __Pyx_memviewslice memviewslice * slice_copy(memview, &memviewslice) # <<<<<<<<<<<<<< @@ -14213,7 +16850,7 @@ static PyObject *__pyx_memoryview_copy_object(struct __pyx_memoryview_obj *__pyx */ __pyx_memoryview_slice_copy(__pyx_v_memview, (&__pyx_v_memviewslice)); - /* "View.MemoryView":1037 + /* "View.MemoryView":1080 * cdef __Pyx_memviewslice memviewslice * slice_copy(memview, &memviewslice) * return memoryview_copy_from_slice(memview, &memviewslice) # <<<<<<<<<<<<<< @@ -14221,13 +16858,13 @@ static PyObject *__pyx_memoryview_copy_object(struct __pyx_memoryview_obj *__pyx * @cname('__pyx_memoryview_copy_object_from_slice') */ __Pyx_XDECREF(__pyx_r); - __pyx_t_1 = __pyx_memoryview_copy_object_from_slice(__pyx_v_memview, (&__pyx_v_memviewslice)); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 1037; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __pyx_memoryview_copy_object_from_slice(__pyx_v_memview, (&__pyx_v_memviewslice)); if (unlikely(!__pyx_t_1)) __PYX_ERR(2, 1080, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_1); __pyx_r = __pyx_t_1; __pyx_t_1 = 0; goto __pyx_L0; - /* "View.MemoryView":1033 + /* "View.MemoryView":1076 * * @cname('__pyx_memoryview_copy_object') * cdef memoryview_copy(memoryview memview): # <<<<<<<<<<<<<< @@ -14246,7 +16883,7 @@ static PyObject *__pyx_memoryview_copy_object(struct __pyx_memoryview_obj *__pyx return __pyx_r; } -/* "View.MemoryView":1040 +/* "View.MemoryView":1083 * * @cname('__pyx_memoryview_copy_object_from_slice') * cdef memoryview_copy_from_slice(memoryview memview, __Pyx_memviewslice *memviewslice): # <<<<<<<<<<<<<< @@ -14264,23 +16901,20 @@ static PyObject *__pyx_memoryview_copy_object_from_slice(struct __pyx_memoryview PyObject *(*__pyx_t_3)(char *); int (*__pyx_t_4)(char *, PyObject *); PyObject *__pyx_t_5 = NULL; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; __Pyx_RefNannySetupContext("memoryview_copy_from_slice", 0); - /* "View.MemoryView":1047 + /* "View.MemoryView":1090 * cdef int (*to_dtype_func)(char *, object) except 0 * * if isinstance(memview, _memoryviewslice): # <<<<<<<<<<<<<< * to_object_func = (<_memoryviewslice> memview).to_object_func * to_dtype_func = (<_memoryviewslice> memview).to_dtype_func */ - __pyx_t_1 = __Pyx_TypeCheck(((PyObject *)__pyx_v_memview), ((PyObject *)__pyx_memoryviewslice_type)); + __pyx_t_1 = __Pyx_TypeCheck(((PyObject *)__pyx_v_memview), __pyx_memoryviewslice_type); __pyx_t_2 = (__pyx_t_1 != 0); if (__pyx_t_2) { - /* "View.MemoryView":1048 + /* "View.MemoryView":1091 * * if isinstance(memview, _memoryviewslice): * to_object_func = (<_memoryviewslice> memview).to_object_func # <<<<<<<<<<<<<< @@ -14290,7 +16924,7 @@ static PyObject *__pyx_memoryview_copy_object_from_slice(struct __pyx_memoryview __pyx_t_3 = ((struct __pyx_memoryviewslice_obj *)__pyx_v_memview)->to_object_func; __pyx_v_to_object_func = __pyx_t_3; - /* "View.MemoryView":1049 + /* "View.MemoryView":1092 * if isinstance(memview, _memoryviewslice): * to_object_func = (<_memoryviewslice> memview).to_object_func * to_dtype_func = (<_memoryviewslice> memview).to_dtype_func # <<<<<<<<<<<<<< @@ -14299,20 +16933,28 @@ static PyObject *__pyx_memoryview_copy_object_from_slice(struct __pyx_memoryview */ __pyx_t_4 = ((struct __pyx_memoryviewslice_obj *)__pyx_v_memview)->to_dtype_func; __pyx_v_to_dtype_func = __pyx_t_4; + + /* "View.MemoryView":1090 + * cdef int (*to_dtype_func)(char *, object) except 0 + * + * if isinstance(memview, _memoryviewslice): # <<<<<<<<<<<<<< + * to_object_func = (<_memoryviewslice> memview).to_object_func + * to_dtype_func = (<_memoryviewslice> memview).to_dtype_func + */ goto __pyx_L3; } - /*else*/ { - /* "View.MemoryView":1051 + /* "View.MemoryView":1094 * to_dtype_func = (<_memoryviewslice> memview).to_dtype_func * else: * to_object_func = NULL # <<<<<<<<<<<<<< * to_dtype_func = NULL * */ + /*else*/ { __pyx_v_to_object_func = NULL; - /* "View.MemoryView":1052 + /* "View.MemoryView":1095 * else: * to_object_func = NULL * to_dtype_func = NULL # <<<<<<<<<<<<<< @@ -14323,7 +16965,7 @@ static PyObject *__pyx_memoryview_copy_object_from_slice(struct __pyx_memoryview } __pyx_L3:; - /* "View.MemoryView":1054 + /* "View.MemoryView":1097 * to_dtype_func = NULL * * return memoryview_fromslice(memviewslice[0], memview.view.ndim, # <<<<<<<<<<<<<< @@ -14332,20 +16974,20 @@ static PyObject *__pyx_memoryview_copy_object_from_slice(struct __pyx_memoryview */ __Pyx_XDECREF(__pyx_r); - /* "View.MemoryView":1056 + /* "View.MemoryView":1099 * return memoryview_fromslice(memviewslice[0], memview.view.ndim, * to_object_func, to_dtype_func, * memview.dtype_is_object) # <<<<<<<<<<<<<< * * */ - __pyx_t_5 = __pyx_memoryview_fromslice((__pyx_v_memviewslice[0]), __pyx_v_memview->view.ndim, __pyx_v_to_object_func, __pyx_v_to_dtype_func, __pyx_v_memview->dtype_is_object); if (unlikely(!__pyx_t_5)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 1054; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = __pyx_memoryview_fromslice((__pyx_v_memviewslice[0]), __pyx_v_memview->view.ndim, __pyx_v_to_object_func, __pyx_v_to_dtype_func, __pyx_v_memview->dtype_is_object); if (unlikely(!__pyx_t_5)) __PYX_ERR(2, 1097, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_5); __pyx_r = __pyx_t_5; __pyx_t_5 = 0; goto __pyx_L0; - /* "View.MemoryView":1040 + /* "View.MemoryView":1083 * * @cname('__pyx_memoryview_copy_object_from_slice') * cdef memoryview_copy_from_slice(memoryview memview, __Pyx_memviewslice *memviewslice): # <<<<<<<<<<<<<< @@ -14364,7 +17006,7 @@ static PyObject *__pyx_memoryview_copy_object_from_slice(struct __pyx_memoryview return __pyx_r; } -/* "View.MemoryView":1062 +/* "View.MemoryView":1105 * * * cdef Py_ssize_t abs_py_ssize_t(Py_ssize_t arg) nogil: # <<<<<<<<<<<<<< @@ -14376,7 +17018,7 @@ static Py_ssize_t abs_py_ssize_t(Py_ssize_t __pyx_v_arg) { Py_ssize_t __pyx_r; int __pyx_t_1; - /* "View.MemoryView":1063 + /* "View.MemoryView":1106 * * cdef Py_ssize_t abs_py_ssize_t(Py_ssize_t arg) nogil: * if arg < 0: # <<<<<<<<<<<<<< @@ -14386,7 +17028,7 @@ static Py_ssize_t abs_py_ssize_t(Py_ssize_t __pyx_v_arg) { __pyx_t_1 = ((__pyx_v_arg < 0) != 0); if (__pyx_t_1) { - /* "View.MemoryView":1064 + /* "View.MemoryView":1107 * cdef Py_ssize_t abs_py_ssize_t(Py_ssize_t arg) nogil: * if arg < 0: * return -arg # <<<<<<<<<<<<<< @@ -14395,21 +17037,29 @@ static Py_ssize_t abs_py_ssize_t(Py_ssize_t __pyx_v_arg) { */ __pyx_r = (-__pyx_v_arg); goto __pyx_L0; - } - /*else*/ { - /* "View.MemoryView":1066 + /* "View.MemoryView":1106 + * + * cdef Py_ssize_t abs_py_ssize_t(Py_ssize_t arg) nogil: + * if arg < 0: # <<<<<<<<<<<<<< + * return -arg + * else: + */ + } + + /* "View.MemoryView":1109 * return -arg * else: * return arg # <<<<<<<<<<<<<< * * @cname('__pyx_get_best_slice_order') */ + /*else*/ { __pyx_r = __pyx_v_arg; goto __pyx_L0; } - /* "View.MemoryView":1062 + /* "View.MemoryView":1105 * * * cdef Py_ssize_t abs_py_ssize_t(Py_ssize_t arg) nogil: # <<<<<<<<<<<<<< @@ -14422,7 +17072,7 @@ static Py_ssize_t abs_py_ssize_t(Py_ssize_t __pyx_v_arg) { return __pyx_r; } -/* "View.MemoryView":1069 +/* "View.MemoryView":1112 * * @cname('__pyx_get_best_slice_order') * cdef char get_best_order(__Pyx_memviewslice *mslice, int ndim) nogil: # <<<<<<<<<<<<<< @@ -14438,8 +17088,9 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ int __pyx_t_1; int __pyx_t_2; int __pyx_t_3; + int __pyx_t_4; - /* "View.MemoryView":1074 + /* "View.MemoryView":1117 * """ * cdef int i * cdef Py_ssize_t c_stride = 0 # <<<<<<<<<<<<<< @@ -14448,7 +17099,7 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ */ __pyx_v_c_stride = 0; - /* "View.MemoryView":1075 + /* "View.MemoryView":1118 * cdef int i * cdef Py_ssize_t c_stride = 0 * cdef Py_ssize_t f_stride = 0 # <<<<<<<<<<<<<< @@ -14457,7 +17108,7 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ */ __pyx_v_f_stride = 0; - /* "View.MemoryView":1077 + /* "View.MemoryView":1120 * cdef Py_ssize_t f_stride = 0 * * for i in range(ndim - 1, -1, -1): # <<<<<<<<<<<<<< @@ -14467,7 +17118,7 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ for (__pyx_t_1 = (__pyx_v_ndim - 1); __pyx_t_1 > -1; __pyx_t_1-=1) { __pyx_v_i = __pyx_t_1; - /* "View.MemoryView":1078 + /* "View.MemoryView":1121 * * for i in range(ndim - 1, -1, -1): * if mslice.shape[i] > 1: # <<<<<<<<<<<<<< @@ -14477,7 +17128,7 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ __pyx_t_2 = (((__pyx_v_mslice->shape[__pyx_v_i]) > 1) != 0); if (__pyx_t_2) { - /* "View.MemoryView":1079 + /* "View.MemoryView":1122 * for i in range(ndim - 1, -1, -1): * if mslice.shape[i] > 1: * c_stride = mslice.strides[i] # <<<<<<<<<<<<<< @@ -14486,7 +17137,7 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ */ __pyx_v_c_stride = (__pyx_v_mslice->strides[__pyx_v_i]); - /* "View.MemoryView":1080 + /* "View.MemoryView":1123 * if mslice.shape[i] > 1: * c_stride = mslice.strides[i] * break # <<<<<<<<<<<<<< @@ -14494,11 +17145,19 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ * for i in range(ndim): */ goto __pyx_L4_break; + + /* "View.MemoryView":1121 + * + * for i in range(ndim - 1, -1, -1): + * if mslice.shape[i] > 1: # <<<<<<<<<<<<<< + * c_stride = mslice.strides[i] + * break + */ } } __pyx_L4_break:; - /* "View.MemoryView":1082 + /* "View.MemoryView":1125 * break * * for i in range(ndim): # <<<<<<<<<<<<<< @@ -14506,10 +17165,11 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ * f_stride = mslice.strides[i] */ __pyx_t_1 = __pyx_v_ndim; - for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_1; __pyx_t_3+=1) { - __pyx_v_i = __pyx_t_3; + __pyx_t_3 = __pyx_t_1; + for (__pyx_t_4 = 0; __pyx_t_4 < __pyx_t_3; __pyx_t_4+=1) { + __pyx_v_i = __pyx_t_4; - /* "View.MemoryView":1083 + /* "View.MemoryView":1126 * * for i in range(ndim): * if mslice.shape[i] > 1: # <<<<<<<<<<<<<< @@ -14519,7 +17179,7 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ __pyx_t_2 = (((__pyx_v_mslice->shape[__pyx_v_i]) > 1) != 0); if (__pyx_t_2) { - /* "View.MemoryView":1084 + /* "View.MemoryView":1127 * for i in range(ndim): * if mslice.shape[i] > 1: * f_stride = mslice.strides[i] # <<<<<<<<<<<<<< @@ -14528,7 +17188,7 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ */ __pyx_v_f_stride = (__pyx_v_mslice->strides[__pyx_v_i]); - /* "View.MemoryView":1085 + /* "View.MemoryView":1128 * if mslice.shape[i] > 1: * f_stride = mslice.strides[i] * break # <<<<<<<<<<<<<< @@ -14536,11 +17196,19 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ * if abs_py_ssize_t(c_stride) <= abs_py_ssize_t(f_stride): */ goto __pyx_L7_break; + + /* "View.MemoryView":1126 + * + * for i in range(ndim): + * if mslice.shape[i] > 1: # <<<<<<<<<<<<<< + * f_stride = mslice.strides[i] + * break + */ } } __pyx_L7_break:; - /* "View.MemoryView":1087 + /* "View.MemoryView":1130 * break * * if abs_py_ssize_t(c_stride) <= abs_py_ssize_t(f_stride): # <<<<<<<<<<<<<< @@ -14550,7 +17218,7 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ __pyx_t_2 = ((abs_py_ssize_t(__pyx_v_c_stride) <= abs_py_ssize_t(__pyx_v_f_stride)) != 0); if (__pyx_t_2) { - /* "View.MemoryView":1088 + /* "View.MemoryView":1131 * * if abs_py_ssize_t(c_stride) <= abs_py_ssize_t(f_stride): * return 'C' # <<<<<<<<<<<<<< @@ -14559,21 +17227,29 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ */ __pyx_r = 'C'; goto __pyx_L0; - } - /*else*/ { - /* "View.MemoryView":1090 + /* "View.MemoryView":1130 + * break + * + * if abs_py_ssize_t(c_stride) <= abs_py_ssize_t(f_stride): # <<<<<<<<<<<<<< + * return 'C' + * else: + */ + } + + /* "View.MemoryView":1133 * return 'C' * else: * return 'F' # <<<<<<<<<<<<<< * * @cython.cdivision(True) */ + /*else*/ { __pyx_r = 'F'; goto __pyx_L0; } - /* "View.MemoryView":1069 + /* "View.MemoryView":1112 * * @cname('__pyx_get_best_slice_order') * cdef char get_best_order(__Pyx_memviewslice *mslice, int ndim) nogil: # <<<<<<<<<<<<<< @@ -14586,7 +17262,7 @@ static char __pyx_get_best_slice_order(__Pyx_memviewslice *__pyx_v_mslice, int _ return __pyx_r; } -/* "View.MemoryView":1093 +/* "View.MemoryView":1136 * * @cython.cdivision(True) * cdef void _copy_strided_to_strided(char *src_data, Py_ssize_t *src_strides, # <<<<<<<<<<<<<< @@ -14605,8 +17281,9 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v int __pyx_t_3; Py_ssize_t __pyx_t_4; Py_ssize_t __pyx_t_5; + Py_ssize_t __pyx_t_6; - /* "View.MemoryView":1100 + /* "View.MemoryView":1143 * * cdef Py_ssize_t i * cdef Py_ssize_t src_extent = src_shape[0] # <<<<<<<<<<<<<< @@ -14615,7 +17292,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v */ __pyx_v_src_extent = (__pyx_v_src_shape[0]); - /* "View.MemoryView":1101 + /* "View.MemoryView":1144 * cdef Py_ssize_t i * cdef Py_ssize_t src_extent = src_shape[0] * cdef Py_ssize_t dst_extent = dst_shape[0] # <<<<<<<<<<<<<< @@ -14624,7 +17301,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v */ __pyx_v_dst_extent = (__pyx_v_dst_shape[0]); - /* "View.MemoryView":1102 + /* "View.MemoryView":1145 * cdef Py_ssize_t src_extent = src_shape[0] * cdef Py_ssize_t dst_extent = dst_shape[0] * cdef Py_ssize_t src_stride = src_strides[0] # <<<<<<<<<<<<<< @@ -14633,7 +17310,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v */ __pyx_v_src_stride = (__pyx_v_src_strides[0]); - /* "View.MemoryView":1103 + /* "View.MemoryView":1146 * cdef Py_ssize_t dst_extent = dst_shape[0] * cdef Py_ssize_t src_stride = src_strides[0] * cdef Py_ssize_t dst_stride = dst_strides[0] # <<<<<<<<<<<<<< @@ -14642,7 +17319,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v */ __pyx_v_dst_stride = (__pyx_v_dst_strides[0]); - /* "View.MemoryView":1105 + /* "View.MemoryView":1148 * cdef Py_ssize_t dst_stride = dst_strides[0] * * if ndim == 1: # <<<<<<<<<<<<<< @@ -14652,7 +17329,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v __pyx_t_1 = ((__pyx_v_ndim == 1) != 0); if (__pyx_t_1) { - /* "View.MemoryView":1106 + /* "View.MemoryView":1149 * * if ndim == 1: * if (src_stride > 0 and dst_stride > 0 and # <<<<<<<<<<<<<< @@ -14661,22 +17338,18 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v */ __pyx_t_2 = ((__pyx_v_src_stride > 0) != 0); if (__pyx_t_2) { - goto __pyx_L6_next_and; } else { __pyx_t_1 = __pyx_t_2; goto __pyx_L5_bool_binop_done; } - __pyx_L6_next_and:; __pyx_t_2 = ((__pyx_v_dst_stride > 0) != 0); if (__pyx_t_2) { - goto __pyx_L7_next_and; } else { __pyx_t_1 = __pyx_t_2; goto __pyx_L5_bool_binop_done; } - __pyx_L7_next_and:; - /* "View.MemoryView":1107 + /* "View.MemoryView":1150 * if ndim == 1: * if (src_stride > 0 and dst_stride > 0 and * src_stride == itemsize == dst_stride): # <<<<<<<<<<<<<< @@ -14690,41 +17363,58 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v __pyx_t_3 = (__pyx_t_2 != 0); __pyx_t_1 = __pyx_t_3; __pyx_L5_bool_binop_done:; + + /* "View.MemoryView":1149 + * + * if ndim == 1: + * if (src_stride > 0 and dst_stride > 0 and # <<<<<<<<<<<<<< + * src_stride == itemsize == dst_stride): + * memcpy(dst_data, src_data, itemsize * dst_extent) + */ if (__pyx_t_1) { - /* "View.MemoryView":1108 + /* "View.MemoryView":1151 * if (src_stride > 0 and dst_stride > 0 and * src_stride == itemsize == dst_stride): * memcpy(dst_data, src_data, itemsize * dst_extent) # <<<<<<<<<<<<<< * else: * for i in range(dst_extent): */ - memcpy(__pyx_v_dst_data, __pyx_v_src_data, (__pyx_v_itemsize * __pyx_v_dst_extent)); + (void)(memcpy(__pyx_v_dst_data, __pyx_v_src_data, (__pyx_v_itemsize * __pyx_v_dst_extent))); + + /* "View.MemoryView":1149 + * + * if ndim == 1: + * if (src_stride > 0 and dst_stride > 0 and # <<<<<<<<<<<<<< + * src_stride == itemsize == dst_stride): + * memcpy(dst_data, src_data, itemsize * dst_extent) + */ goto __pyx_L4; } - /*else*/ { - /* "View.MemoryView":1110 + /* "View.MemoryView":1153 * memcpy(dst_data, src_data, itemsize * dst_extent) * else: * for i in range(dst_extent): # <<<<<<<<<<<<<< * memcpy(dst_data, src_data, itemsize) * src_data += src_stride */ + /*else*/ { __pyx_t_4 = __pyx_v_dst_extent; - for (__pyx_t_5 = 0; __pyx_t_5 < __pyx_t_4; __pyx_t_5+=1) { - __pyx_v_i = __pyx_t_5; + __pyx_t_5 = __pyx_t_4; + for (__pyx_t_6 = 0; __pyx_t_6 < __pyx_t_5; __pyx_t_6+=1) { + __pyx_v_i = __pyx_t_6; - /* "View.MemoryView":1111 + /* "View.MemoryView":1154 * else: * for i in range(dst_extent): * memcpy(dst_data, src_data, itemsize) # <<<<<<<<<<<<<< * src_data += src_stride * dst_data += dst_stride */ - memcpy(__pyx_v_dst_data, __pyx_v_src_data, __pyx_v_itemsize); + (void)(memcpy(__pyx_v_dst_data, __pyx_v_src_data, __pyx_v_itemsize)); - /* "View.MemoryView":1112 + /* "View.MemoryView":1155 * for i in range(dst_extent): * memcpy(dst_data, src_data, itemsize) * src_data += src_stride # <<<<<<<<<<<<<< @@ -14733,7 +17423,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v */ __pyx_v_src_data = (__pyx_v_src_data + __pyx_v_src_stride); - /* "View.MemoryView":1113 + /* "View.MemoryView":1156 * memcpy(dst_data, src_data, itemsize) * src_data += src_stride * dst_data += dst_stride # <<<<<<<<<<<<<< @@ -14744,22 +17434,31 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v } } __pyx_L4:; + + /* "View.MemoryView":1148 + * cdef Py_ssize_t dst_stride = dst_strides[0] + * + * if ndim == 1: # <<<<<<<<<<<<<< + * if (src_stride > 0 and dst_stride > 0 and + * src_stride == itemsize == dst_stride): + */ goto __pyx_L3; } - /*else*/ { - /* "View.MemoryView":1115 + /* "View.MemoryView":1158 * dst_data += dst_stride * else: * for i in range(dst_extent): # <<<<<<<<<<<<<< * _copy_strided_to_strided(src_data, src_strides + 1, * dst_data, dst_strides + 1, */ + /*else*/ { __pyx_t_4 = __pyx_v_dst_extent; - for (__pyx_t_5 = 0; __pyx_t_5 < __pyx_t_4; __pyx_t_5+=1) { - __pyx_v_i = __pyx_t_5; + __pyx_t_5 = __pyx_t_4; + for (__pyx_t_6 = 0; __pyx_t_6 < __pyx_t_5; __pyx_t_6+=1) { + __pyx_v_i = __pyx_t_6; - /* "View.MemoryView":1116 + /* "View.MemoryView":1159 * else: * for i in range(dst_extent): * _copy_strided_to_strided(src_data, src_strides + 1, # <<<<<<<<<<<<<< @@ -14768,7 +17467,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v */ _copy_strided_to_strided(__pyx_v_src_data, (__pyx_v_src_strides + 1), __pyx_v_dst_data, (__pyx_v_dst_strides + 1), (__pyx_v_src_shape + 1), (__pyx_v_dst_shape + 1), (__pyx_v_ndim - 1), __pyx_v_itemsize); - /* "View.MemoryView":1120 + /* "View.MemoryView":1163 * src_shape + 1, dst_shape + 1, * ndim - 1, itemsize) * src_data += src_stride # <<<<<<<<<<<<<< @@ -14777,7 +17476,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v */ __pyx_v_src_data = (__pyx_v_src_data + __pyx_v_src_stride); - /* "View.MemoryView":1121 + /* "View.MemoryView":1164 * ndim - 1, itemsize) * src_data += src_stride * dst_data += dst_stride # <<<<<<<<<<<<<< @@ -14789,7 +17488,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v } __pyx_L3:; - /* "View.MemoryView":1093 + /* "View.MemoryView":1136 * * @cython.cdivision(True) * cdef void _copy_strided_to_strided(char *src_data, Py_ssize_t *src_strides, # <<<<<<<<<<<<<< @@ -14800,7 +17499,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v /* function exit code */ } -/* "View.MemoryView":1123 +/* "View.MemoryView":1166 * dst_data += dst_stride * * cdef void copy_strided_to_strided(__Pyx_memviewslice *src, # <<<<<<<<<<<<<< @@ -14810,7 +17509,7 @@ static void _copy_strided_to_strided(char *__pyx_v_src_data, Py_ssize_t *__pyx_v static void copy_strided_to_strided(__Pyx_memviewslice *__pyx_v_src, __Pyx_memviewslice *__pyx_v_dst, int __pyx_v_ndim, size_t __pyx_v_itemsize) { - /* "View.MemoryView":1126 + /* "View.MemoryView":1169 * __Pyx_memviewslice *dst, * int ndim, size_t itemsize) nogil: * _copy_strided_to_strided(src.data, src.strides, dst.data, dst.strides, # <<<<<<<<<<<<<< @@ -14819,7 +17518,7 @@ static void copy_strided_to_strided(__Pyx_memviewslice *__pyx_v_src, __Pyx_memvi */ _copy_strided_to_strided(__pyx_v_src->data, __pyx_v_src->strides, __pyx_v_dst->data, __pyx_v_dst->strides, __pyx_v_src->shape, __pyx_v_dst->shape, __pyx_v_ndim, __pyx_v_itemsize); - /* "View.MemoryView":1123 + /* "View.MemoryView":1166 * dst_data += dst_stride * * cdef void copy_strided_to_strided(__Pyx_memviewslice *src, # <<<<<<<<<<<<<< @@ -14830,7 +17529,7 @@ static void copy_strided_to_strided(__Pyx_memviewslice *__pyx_v_src, __Pyx_memvi /* function exit code */ } -/* "View.MemoryView":1130 +/* "View.MemoryView":1173 * * @cname('__pyx_memoryview_slice_get_size') * cdef Py_ssize_t slice_get_size(__Pyx_memviewslice *src, int ndim) nogil: # <<<<<<<<<<<<<< @@ -14845,8 +17544,9 @@ static Py_ssize_t __pyx_memoryview_slice_get_size(__Pyx_memviewslice *__pyx_v_sr Py_ssize_t __pyx_t_1; int __pyx_t_2; int __pyx_t_3; + int __pyx_t_4; - /* "View.MemoryView":1133 + /* "View.MemoryView":1176 * "Return the size of the memory occupied by the slice in number of bytes" * cdef int i * cdef Py_ssize_t size = src.memview.view.itemsize # <<<<<<<<<<<<<< @@ -14856,7 +17556,7 @@ static Py_ssize_t __pyx_memoryview_slice_get_size(__Pyx_memviewslice *__pyx_v_sr __pyx_t_1 = __pyx_v_src->memview->view.itemsize; __pyx_v_size = __pyx_t_1; - /* "View.MemoryView":1135 + /* "View.MemoryView":1178 * cdef Py_ssize_t size = src.memview.view.itemsize * * for i in range(ndim): # <<<<<<<<<<<<<< @@ -14864,10 +17564,11 @@ static Py_ssize_t __pyx_memoryview_slice_get_size(__Pyx_memviewslice *__pyx_v_sr * */ __pyx_t_2 = __pyx_v_ndim; - for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) { - __pyx_v_i = __pyx_t_3; + __pyx_t_3 = __pyx_t_2; + for (__pyx_t_4 = 0; __pyx_t_4 < __pyx_t_3; __pyx_t_4+=1) { + __pyx_v_i = __pyx_t_4; - /* "View.MemoryView":1136 + /* "View.MemoryView":1179 * * for i in range(ndim): * size *= src.shape[i] # <<<<<<<<<<<<<< @@ -14877,7 +17578,7 @@ static Py_ssize_t __pyx_memoryview_slice_get_size(__Pyx_memviewslice *__pyx_v_sr __pyx_v_size = (__pyx_v_size * (__pyx_v_src->shape[__pyx_v_i])); } - /* "View.MemoryView":1138 + /* "View.MemoryView":1181 * size *= src.shape[i] * * return size # <<<<<<<<<<<<<< @@ -14887,7 +17588,7 @@ static Py_ssize_t __pyx_memoryview_slice_get_size(__Pyx_memviewslice *__pyx_v_sr __pyx_r = __pyx_v_size; goto __pyx_L0; - /* "View.MemoryView":1130 + /* "View.MemoryView":1173 * * @cname('__pyx_memoryview_slice_get_size') * cdef Py_ssize_t slice_get_size(__Pyx_memviewslice *src, int ndim) nogil: # <<<<<<<<<<<<<< @@ -14900,7 +17601,7 @@ static Py_ssize_t __pyx_memoryview_slice_get_size(__Pyx_memviewslice *__pyx_v_sr return __pyx_r; } -/* "View.MemoryView":1141 +/* "View.MemoryView":1184 * * @cname('__pyx_fill_contig_strides_array') * cdef Py_ssize_t fill_contig_strides_array( # <<<<<<<<<<<<<< @@ -14914,8 +17615,9 @@ static Py_ssize_t __pyx_fill_contig_strides_array(Py_ssize_t *__pyx_v_shape, Py_ int __pyx_t_1; int __pyx_t_2; int __pyx_t_3; + int __pyx_t_4; - /* "View.MemoryView":1150 + /* "View.MemoryView":1193 * cdef int idx * * if order == 'F': # <<<<<<<<<<<<<< @@ -14925,7 +17627,7 @@ static Py_ssize_t __pyx_fill_contig_strides_array(Py_ssize_t *__pyx_v_shape, Py_ __pyx_t_1 = ((__pyx_v_order == 'F') != 0); if (__pyx_t_1) { - /* "View.MemoryView":1151 + /* "View.MemoryView":1194 * * if order == 'F': * for idx in range(ndim): # <<<<<<<<<<<<<< @@ -14933,10 +17635,11 @@ static Py_ssize_t __pyx_fill_contig_strides_array(Py_ssize_t *__pyx_v_shape, Py_ * stride = stride * shape[idx] */ __pyx_t_2 = __pyx_v_ndim; - for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) { - __pyx_v_idx = __pyx_t_3; + __pyx_t_3 = __pyx_t_2; + for (__pyx_t_4 = 0; __pyx_t_4 < __pyx_t_3; __pyx_t_4+=1) { + __pyx_v_idx = __pyx_t_4; - /* "View.MemoryView":1152 + /* "View.MemoryView":1195 * if order == 'F': * for idx in range(ndim): * strides[idx] = stride # <<<<<<<<<<<<<< @@ -14945,7 +17648,7 @@ static Py_ssize_t __pyx_fill_contig_strides_array(Py_ssize_t *__pyx_v_shape, Py_ */ (__pyx_v_strides[__pyx_v_idx]) = __pyx_v_stride; - /* "View.MemoryView":1153 + /* "View.MemoryView":1196 * for idx in range(ndim): * strides[idx] = stride * stride = stride * shape[idx] # <<<<<<<<<<<<<< @@ -14954,21 +17657,29 @@ static Py_ssize_t __pyx_fill_contig_strides_array(Py_ssize_t *__pyx_v_shape, Py_ */ __pyx_v_stride = (__pyx_v_stride * (__pyx_v_shape[__pyx_v_idx])); } + + /* "View.MemoryView":1193 + * cdef int idx + * + * if order == 'F': # <<<<<<<<<<<<<< + * for idx in range(ndim): + * strides[idx] = stride + */ goto __pyx_L3; } - /*else*/ { - /* "View.MemoryView":1155 + /* "View.MemoryView":1198 * stride = stride * shape[idx] * else: * for idx in range(ndim - 1, -1, -1): # <<<<<<<<<<<<<< * strides[idx] = stride * stride = stride * shape[idx] */ + /*else*/ { for (__pyx_t_2 = (__pyx_v_ndim - 1); __pyx_t_2 > -1; __pyx_t_2-=1) { __pyx_v_idx = __pyx_t_2; - /* "View.MemoryView":1156 + /* "View.MemoryView":1199 * else: * for idx in range(ndim - 1, -1, -1): * strides[idx] = stride # <<<<<<<<<<<<<< @@ -14977,7 +17688,7 @@ static Py_ssize_t __pyx_fill_contig_strides_array(Py_ssize_t *__pyx_v_shape, Py_ */ (__pyx_v_strides[__pyx_v_idx]) = __pyx_v_stride; - /* "View.MemoryView":1157 + /* "View.MemoryView":1200 * for idx in range(ndim - 1, -1, -1): * strides[idx] = stride * stride = stride * shape[idx] # <<<<<<<<<<<<<< @@ -14989,7 +17700,7 @@ static Py_ssize_t __pyx_fill_contig_strides_array(Py_ssize_t *__pyx_v_shape, Py_ } __pyx_L3:; - /* "View.MemoryView":1159 + /* "View.MemoryView":1202 * stride = stride * shape[idx] * * return stride # <<<<<<<<<<<<<< @@ -14999,7 +17710,7 @@ static Py_ssize_t __pyx_fill_contig_strides_array(Py_ssize_t *__pyx_v_shape, Py_ __pyx_r = __pyx_v_stride; goto __pyx_L0; - /* "View.MemoryView":1141 + /* "View.MemoryView":1184 * * 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__pyx_t_1; - /* "View.MemoryView":1174 + /* "View.MemoryView":1217 * * cdef size_t itemsize = src.memview.view.itemsize * cdef size_t size = slice_get_size(src, ndim) # <<<<<<<<<<<<<< @@ -15054,7 +17763,7 @@ static void *__pyx_memoryview_copy_data_to_temp(__Pyx_memviewslice *__pyx_v_src, */ __pyx_v_size = __pyx_memoryview_slice_get_size(__pyx_v_src, __pyx_v_ndim); - /* "View.MemoryView":1176 + /* "View.MemoryView":1219 * cdef size_t size = slice_get_size(src, ndim) * * result = malloc(size) # <<<<<<<<<<<<<< @@ -15063,7 +17772,7 @@ static void *__pyx_memoryview_copy_data_to_temp(__Pyx_memviewslice *__pyx_v_src, */ __pyx_v_result = malloc(__pyx_v_size); - /* "View.MemoryView":1177 + /* "View.MemoryView":1220 * * result = malloc(size) * if not result: # <<<<<<<<<<<<<< @@ -15073,19 +17782,25 @@ static void *__pyx_memoryview_copy_data_to_temp(__Pyx_memviewslice *__pyx_v_src, __pyx_t_2 = ((!(__pyx_v_result != 0)) != 0); if (__pyx_t_2) { - /* "View.MemoryView":1178 + /* "View.MemoryView":1221 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__pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ */ __pyx_v_broadcasting = 1; - /* "View.MemoryView":1249 + /* "View.MemoryView":1292 * if src.shape[i] == 1: * broadcasting = True * src.strides[i] = 0 # <<<<<<<<<<<<<< @@ -15729,25 +18444,39 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ * _err_extents(i, dst.shape[i], src.shape[i]) */ (__pyx_v_src.strides[__pyx_v_i]) = 0; + + /* "View.MemoryView":1290 + * for i in range(ndim): + * if src.shape[i] != dst.shape[i]: + * if src.shape[i] == 1: # <<<<<<<<<<<<<< + * broadcasting = True + * src.strides[i] = 0 + */ goto __pyx_L7; } - /*else*/ { - /* "View.MemoryView":1251 + /* "View.MemoryView":1294 * src.strides[i] = 0 * else: * _err_extents(i, dst.shape[i], src.shape[i]) # <<<<<<<<<<<<<< * * if src.suboffsets[i] >= 0: */ - __pyx_t_4 = __pyx_memoryview_err_extents(__pyx_v_i, (__pyx_v_dst.shape[__pyx_v_i]), (__pyx_v_src.shape[__pyx_v_i])); if (unlikely(__pyx_t_4 == -1)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 1251; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + /*else*/ { + __pyx_t_6 = __pyx_memoryview_err_extents(__pyx_v_i, (__pyx_v_dst.shape[__pyx_v_i]), (__pyx_v_src.shape[__pyx_v_i])); if (unlikely(__pyx_t_6 == ((int)-1))) __PYX_ERR(2, 1294, __pyx_L1_error) } __pyx_L7:; - goto __pyx_L6; - } - __pyx_L6:; - /* "View.MemoryView":1253 + /* "View.MemoryView":1289 + * + * for i in range(ndim): + * if src.shape[i] != dst.shape[i]: # <<<<<<<<<<<<<< + * if src.shape[i] == 1: + * broadcasting = True + */ + } + + /* "View.MemoryView":1296 * _err_extents(i, dst.shape[i], src.shape[i]) * * if src.suboffsets[i] >= 0: # <<<<<<<<<<<<<< @@ -15757,62 +18486,74 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ __pyx_t_2 = (((__pyx_v_src.suboffsets[__pyx_v_i]) >= 0) != 0); if (__pyx_t_2) { - /* "View.MemoryView":1254 + /* "View.MemoryView":1297 * * if src.suboffsets[i] >= 0: * _err_dim(ValueError, "Dimension %d is not direct", i) # <<<<<<<<<<<<<< * * if slices_overlap(&src, &dst, ndim, itemsize): */ - __pyx_t_4 = __pyx_memoryview_err_dim(__pyx_builtin_ValueError, __pyx_k_Dimension_d_is_not_direct, __pyx_v_i); if (unlikely(__pyx_t_4 == -1)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 1254; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - goto __pyx_L8; + __pyx_t_6 = __pyx_memoryview_err_dim(__pyx_builtin_ValueError, ((char *)"Dimension %d is not direct"), __pyx_v_i); if (unlikely(__pyx_t_6 == ((int)-1))) __PYX_ERR(2, 1297, __pyx_L1_error) + + /* "View.MemoryView":1296 + * _err_extents(i, dst.shape[i], src.shape[i]) + * + * if src.suboffsets[i] >= 0: # <<<<<<<<<<<<<< + * _err_dim(ValueError, "Dimension %d is not direct", i) + * + */ } - __pyx_L8:; } - /* "View.MemoryView":1256 + /* "View.MemoryView":1299 * _err_dim(ValueError, "Dimension %d is not direct", i) * * if slices_overlap(&src, &dst, ndim, itemsize): # <<<<<<<<<<<<<< * - * if not slice_is_contig(&src, order, ndim): + * if not slice_is_contig(src, order, ndim): */ __pyx_t_2 = (__pyx_slices_overlap((&__pyx_v_src), (&__pyx_v_dst), __pyx_v_ndim, __pyx_v_itemsize) != 0); if (__pyx_t_2) { - /* "View.MemoryView":1258 + /* "View.MemoryView":1301 * if slices_overlap(&src, &dst, ndim, itemsize): * - * if not slice_is_contig(&src, order, ndim): # <<<<<<<<<<<<<< + * if not slice_is_contig(src, order, ndim): # <<<<<<<<<<<<<< * order = get_best_order(&dst, ndim) * */ - __pyx_t_2 = ((!(__pyx_memviewslice_is_contig((&__pyx_v_src), __pyx_v_order, __pyx_v_ndim) != 0)) != 0); + __pyx_t_2 = ((!(__pyx_memviewslice_is_contig(__pyx_v_src, __pyx_v_order, __pyx_v_ndim) != 0)) != 0); if (__pyx_t_2) { - /* "View.MemoryView":1259 + /* "View.MemoryView":1302 * - * if not slice_is_contig(&src, order, ndim): + * if not slice_is_contig(src, order, ndim): * order = get_best_order(&dst, ndim) # <<<<<<<<<<<<<< * * tmpdata = copy_data_to_temp(&src, &tmp, order, ndim) */ __pyx_v_order = __pyx_get_best_slice_order((&__pyx_v_dst), __pyx_v_ndim); - goto __pyx_L10; - } - __pyx_L10:; - /* "View.MemoryView":1261 + /* "View.MemoryView":1301 + * if slices_overlap(&src, &dst, ndim, itemsize): + * + * if not slice_is_contig(src, order, ndim): # <<<<<<<<<<<<<< + * order = get_best_order(&dst, ndim) + * + */ + } + + /* "View.MemoryView":1304 * order = get_best_order(&dst, ndim) * * tmpdata = copy_data_to_temp(&src, &tmp, order, ndim) # <<<<<<<<<<<<<< * src = tmp * */ - __pyx_t_6 = __pyx_memoryview_copy_data_to_temp((&__pyx_v_src), (&__pyx_v_tmp), __pyx_v_order, __pyx_v_ndim); if (unlikely(__pyx_t_6 == NULL)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 1261; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_v_tmpdata = __pyx_t_6; + __pyx_t_7 = __pyx_memoryview_copy_data_to_temp((&__pyx_v_src), (&__pyx_v_tmp), __pyx_v_order, __pyx_v_ndim); if (unlikely(__pyx_t_7 == ((void *)NULL))) __PYX_ERR(2, 1304, __pyx_L1_error) + __pyx_v_tmpdata = __pyx_t_7; - /* "View.MemoryView":1262 + /* "View.MemoryView":1305 * * tmpdata = copy_data_to_temp(&src, &tmp, order, ndim) * src = tmp # <<<<<<<<<<<<<< @@ -15820,11 +18561,17 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ * if not broadcasting: */ __pyx_v_src = __pyx_v_tmp; - goto __pyx_L9; - } - __pyx_L9:; - /* "View.MemoryView":1264 + /* "View.MemoryView":1299 + * _err_dim(ValueError, "Dimension %d is not direct", i) + * + * if slices_overlap(&src, &dst, ndim, itemsize): # <<<<<<<<<<<<<< + * + * if not slice_is_contig(src, order, ndim): + */ + } + + /* "View.MemoryView":1307 * src = tmp * * if not broadcasting: # <<<<<<<<<<<<<< @@ -15834,51 +18581,66 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ __pyx_t_2 = ((!(__pyx_v_broadcasting != 0)) != 0); if (__pyx_t_2) { - /* "View.MemoryView":1267 + /* "View.MemoryView":1310 * * - * if slice_is_contig(&src, 'C', ndim): # <<<<<<<<<<<<<< - * direct_copy = slice_is_contig(&dst, 'C', ndim) - * elif slice_is_contig(&src, 'F', ndim): + * if slice_is_contig(src, 'C', ndim): # <<<<<<<<<<<<<< + * direct_copy = slice_is_contig(dst, 'C', ndim) + * elif slice_is_contig(src, 'F', ndim): */ - __pyx_t_2 = (__pyx_memviewslice_is_contig((&__pyx_v_src), 'C', __pyx_v_ndim) != 0); + __pyx_t_2 = (__pyx_memviewslice_is_contig(__pyx_v_src, 'C', __pyx_v_ndim) != 0); if (__pyx_t_2) { - /* "View.MemoryView":1268 + /* "View.MemoryView":1311 * - * if slice_is_contig(&src, 'C', ndim): - * direct_copy = slice_is_contig(&dst, 'C', ndim) # <<<<<<<<<<<<<< - * elif slice_is_contig(&src, 'F', ndim): - * direct_copy = slice_is_contig(&dst, 'F', ndim) + * if slice_is_contig(src, 'C', ndim): + * direct_copy = slice_is_contig(dst, 'C', ndim) # <<<<<<<<<<<<<< + * elif slice_is_contig(src, 'F', ndim): + * direct_copy = slice_is_contig(dst, 'F', ndim) + */ + __pyx_v_direct_copy = __pyx_memviewslice_is_contig(__pyx_v_dst, 'C', __pyx_v_ndim); + + /* "View.MemoryView":1310 + * + * + * if slice_is_contig(src, 'C', ndim): # <<<<<<<<<<<<<< + * direct_copy = slice_is_contig(dst, 'C', ndim) + * elif slice_is_contig(src, 'F', ndim): */ - __pyx_v_direct_copy = __pyx_memviewslice_is_contig((&__pyx_v_dst), 'C', __pyx_v_ndim); goto __pyx_L12; } - /* "View.MemoryView":1269 - * if slice_is_contig(&src, 'C', ndim): - * direct_copy = slice_is_contig(&dst, 'C', ndim) - * elif slice_is_contig(&src, 'F', ndim): # <<<<<<<<<<<<<< - * direct_copy = slice_is_contig(&dst, 'F', ndim) + /* "View.MemoryView":1312 + * if slice_is_contig(src, 'C', ndim): + * direct_copy = slice_is_contig(dst, 'C', ndim) + * elif slice_is_contig(src, 'F', ndim): # <<<<<<<<<<<<<< + * direct_copy = slice_is_contig(dst, 'F', ndim) * */ - __pyx_t_2 = (__pyx_memviewslice_is_contig((&__pyx_v_src), 'F', __pyx_v_ndim) != 0); + __pyx_t_2 = (__pyx_memviewslice_is_contig(__pyx_v_src, 'F', __pyx_v_ndim) != 0); if (__pyx_t_2) { - /* "View.MemoryView":1270 - * direct_copy = slice_is_contig(&dst, 'C', ndim) - * elif slice_is_contig(&src, 'F', ndim): - * direct_copy = slice_is_contig(&dst, 'F', ndim) # <<<<<<<<<<<<<< + /* "View.MemoryView":1313 + * direct_copy = slice_is_contig(dst, 'C', ndim) + * elif slice_is_contig(src, 'F', ndim): + * direct_copy = slice_is_contig(dst, 'F', ndim) # <<<<<<<<<<<<<< * * if direct_copy: */ - __pyx_v_direct_copy = __pyx_memviewslice_is_contig((&__pyx_v_dst), 'F', __pyx_v_ndim); - goto __pyx_L12; + __pyx_v_direct_copy = __pyx_memviewslice_is_contig(__pyx_v_dst, 'F', __pyx_v_ndim); + + /* "View.MemoryView":1312 + * if slice_is_contig(src, 'C', ndim): + * direct_copy = slice_is_contig(dst, 'C', ndim) + * elif slice_is_contig(src, 'F', ndim): # <<<<<<<<<<<<<< + * direct_copy = slice_is_contig(dst, 'F', ndim) + * + */ } __pyx_L12:; - /* "View.MemoryView":1272 - * direct_copy = slice_is_contig(&dst, 'F', ndim) + /* "View.MemoryView":1315 + * direct_copy = slice_is_contig(dst, 'F', ndim) * * if direct_copy: # <<<<<<<<<<<<<< * @@ -15887,7 +18649,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ __pyx_t_2 = (__pyx_v_direct_copy != 0); if (__pyx_t_2) { - /* "View.MemoryView":1274 + /* "View.MemoryView":1317 * if direct_copy: * * refcount_copying(&dst, dtype_is_object, ndim, False) # <<<<<<<<<<<<<< @@ -15896,16 +18658,16 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ */ __pyx_memoryview_refcount_copying((&__pyx_v_dst), __pyx_v_dtype_is_object, __pyx_v_ndim, 0); - /* "View.MemoryView":1275 + /* "View.MemoryView":1318 * * refcount_copying(&dst, dtype_is_object, ndim, False) * memcpy(dst.data, src.data, slice_get_size(&src, ndim)) # <<<<<<<<<<<<<< * refcount_copying(&dst, dtype_is_object, ndim, True) * free(tmpdata) */ - memcpy(__pyx_v_dst.data, __pyx_v_src.data, __pyx_memoryview_slice_get_size((&__pyx_v_src), __pyx_v_ndim)); + (void)(memcpy(__pyx_v_dst.data, __pyx_v_src.data, __pyx_memoryview_slice_get_size((&__pyx_v_src), __pyx_v_ndim))); - /* "View.MemoryView":1276 + /* "View.MemoryView":1319 * refcount_copying(&dst, dtype_is_object, ndim, False) * memcpy(dst.data, src.data, slice_get_size(&src, ndim)) * refcount_copying(&dst, dtype_is_object, ndim, True) # <<<<<<<<<<<<<< @@ -15914,7 +18676,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ */ __pyx_memoryview_refcount_copying((&__pyx_v_dst), __pyx_v_dtype_is_object, __pyx_v_ndim, 1); - /* "View.MemoryView":1277 + /* "View.MemoryView":1320 * memcpy(dst.data, src.data, slice_get_size(&src, ndim)) * refcount_copying(&dst, dtype_is_object, ndim, True) * free(tmpdata) # <<<<<<<<<<<<<< @@ -15923,7 +18685,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ */ free(__pyx_v_tmpdata); - /* "View.MemoryView":1278 + /* "View.MemoryView":1321 * refcount_copying(&dst, dtype_is_object, ndim, True) * free(tmpdata) * return 0 # <<<<<<<<<<<<<< @@ -15932,12 +18694,26 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ */ __pyx_r = 0; goto __pyx_L0; - } - goto __pyx_L11; - } - __pyx_L11:; - /* "View.MemoryView":1280 + /* "View.MemoryView":1315 + * direct_copy = slice_is_contig(dst, 'F', ndim) + * + * if direct_copy: # <<<<<<<<<<<<<< + * + * refcount_copying(&dst, dtype_is_object, ndim, False) + */ + } + + /* "View.MemoryView":1307 + * src = tmp + * + * if not broadcasting: # <<<<<<<<<<<<<< + * + * + */ + } + + /* "View.MemoryView":1323 * return 0 * * if order == 'F' == get_best_order(&dst, ndim): # <<<<<<<<<<<<<< @@ -15948,31 +18724,37 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ if (__pyx_t_2) { __pyx_t_2 = ('F' == __pyx_get_best_slice_order((&__pyx_v_dst), __pyx_v_ndim)); } - __pyx_t_7 = (__pyx_t_2 != 0); - if (__pyx_t_7) { + __pyx_t_8 = (__pyx_t_2 != 0); + if (__pyx_t_8) { - /* "View.MemoryView":1283 + /* "View.MemoryView":1326 * * * transpose_memslice(&src) # <<<<<<<<<<<<<< * transpose_memslice(&dst) * */ - __pyx_t_5 = __pyx_memslice_transpose((&__pyx_v_src)); if (unlikely(__pyx_t_5 == 0)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 1283; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_5 = __pyx_memslice_transpose((&__pyx_v_src)); if (unlikely(__pyx_t_5 == ((int)0))) __PYX_ERR(2, 1326, __pyx_L1_error) - /* "View.MemoryView":1284 + /* "View.MemoryView":1327 * * transpose_memslice(&src) * transpose_memslice(&dst) # <<<<<<<<<<<<<< * * refcount_copying(&dst, dtype_is_object, ndim, False) */ - __pyx_t_5 = __pyx_memslice_transpose((&__pyx_v_dst)); if (unlikely(__pyx_t_5 == 0)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 1284; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - goto __pyx_L14; - } - __pyx_L14:; + __pyx_t_5 = __pyx_memslice_transpose((&__pyx_v_dst)); if (unlikely(__pyx_t_5 == ((int)0))) __PYX_ERR(2, 1327, __pyx_L1_error) - /* "View.MemoryView":1286 + /* "View.MemoryView":1323 + * return 0 + * + * if order == 'F' == get_best_order(&dst, ndim): # <<<<<<<<<<<<<< + * + * + */ + } + + /* "View.MemoryView":1329 * transpose_memslice(&dst) * * refcount_copying(&dst, dtype_is_object, ndim, False) # <<<<<<<<<<<<<< @@ -15981,7 +18763,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ */ __pyx_memoryview_refcount_copying((&__pyx_v_dst), __pyx_v_dtype_is_object, __pyx_v_ndim, 0); - /* "View.MemoryView":1287 + /* "View.MemoryView":1330 * * refcount_copying(&dst, dtype_is_object, ndim, False) * copy_strided_to_strided(&src, &dst, ndim, itemsize) # <<<<<<<<<<<<<< @@ -15990,7 +18772,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ */ copy_strided_to_strided((&__pyx_v_src), (&__pyx_v_dst), __pyx_v_ndim, __pyx_v_itemsize); - /* "View.MemoryView":1288 + /* "View.MemoryView":1331 * refcount_copying(&dst, dtype_is_object, ndim, False) * copy_strided_to_strided(&src, &dst, ndim, itemsize) * refcount_copying(&dst, dtype_is_object, ndim, True) # <<<<<<<<<<<<<< @@ -15999,7 +18781,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ */ __pyx_memoryview_refcount_copying((&__pyx_v_dst), __pyx_v_dtype_is_object, __pyx_v_ndim, 1); - /* "View.MemoryView":1290 + /* "View.MemoryView":1333 * refcount_copying(&dst, dtype_is_object, ndim, True) * * free(tmpdata) # <<<<<<<<<<<<<< @@ -16008,7 +18790,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ */ free(__pyx_v_tmpdata); - /* "View.MemoryView":1291 + /* "View.MemoryView":1334 * * free(tmpdata) * return 0 # <<<<<<<<<<<<<< @@ -16018,7 +18800,7 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ __pyx_r = 0; goto __pyx_L0; - /* "View.MemoryView":1222 + /* "View.MemoryView":1265 * * @cname('__pyx_memoryview_copy_contents') * cdef int memoryview_copy_contents(__Pyx_memviewslice src, # <<<<<<<<<<<<<< @@ -16030,11 +18812,11 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ __pyx_L1_error:; { #ifdef WITH_THREAD - PyGILState_STATE __pyx_gilstate_save = PyGILState_Ensure(); + PyGILState_STATE __pyx_gilstate_save = __Pyx_PyGILState_Ensure(); #endif __Pyx_AddTraceback("View.MemoryView.memoryview_copy_contents", __pyx_clineno, __pyx_lineno, __pyx_filename); #ifdef WITH_THREAD - PyGILState_Release(__pyx_gilstate_save); + __Pyx_PyGILState_Release(__pyx_gilstate_save); #endif } __pyx_r = -1; @@ -16042,21 +18824,22 @@ static int __pyx_memoryview_copy_contents(__Pyx_memviewslice __pyx_v_src, __Pyx_ return __pyx_r; } -/* "View.MemoryView":1294 +/* "View.MemoryView":1337 * * @cname('__pyx_memoryview_broadcast_leading') - * cdef void broadcast_leading(__Pyx_memviewslice *slice, # <<<<<<<<<<<<<< + * cdef void broadcast_leading(__Pyx_memviewslice *mslice, # <<<<<<<<<<<<<< * int ndim, * int ndim_other) nogil: */ -static void __pyx_memoryview_broadcast_leading(__Pyx_memviewslice *__pyx_v_slice, int __pyx_v_ndim, int __pyx_v_ndim_other) { +static void __pyx_memoryview_broadcast_leading(__Pyx_memviewslice *__pyx_v_mslice, int __pyx_v_ndim, int __pyx_v_ndim_other) { int __pyx_v_i; int __pyx_v_offset; int __pyx_t_1; int __pyx_t_2; + int __pyx_t_3; - /* "View.MemoryView":1298 + /* "View.MemoryView":1341 * int ndim_other) nogil: * cdef int i * cdef int offset = ndim_other - ndim # <<<<<<<<<<<<<< @@ -16065,87 +18848,88 @@ static void __pyx_memoryview_broadcast_leading(__Pyx_memviewslice *__pyx_v_slice */ __pyx_v_offset = (__pyx_v_ndim_other - __pyx_v_ndim); - /* "View.MemoryView":1300 + /* "View.MemoryView":1343 * cdef int offset = ndim_other - ndim * * for i in range(ndim - 1, -1, -1): # <<<<<<<<<<<<<< - * slice.shape[i + offset] = slice.shape[i] - * slice.strides[i + offset] = slice.strides[i] + * mslice.shape[i + offset] = mslice.shape[i] + * mslice.strides[i + offset] = mslice.strides[i] */ for (__pyx_t_1 = (__pyx_v_ndim - 1); __pyx_t_1 > -1; __pyx_t_1-=1) { __pyx_v_i = __pyx_t_1; - /* "View.MemoryView":1301 + /* "View.MemoryView":1344 * * for i in range(ndim - 1, -1, -1): - * slice.shape[i + offset] = slice.shape[i] # <<<<<<<<<<<<<< - * slice.strides[i + offset] = slice.strides[i] - * slice.suboffsets[i + offset] = slice.suboffsets[i] + * mslice.shape[i + offset] = mslice.shape[i] # <<<<<<<<<<<<<< + * mslice.strides[i + offset] = mslice.strides[i] + * mslice.suboffsets[i + offset] = mslice.suboffsets[i] */ - (__pyx_v_slice->shape[(__pyx_v_i + __pyx_v_offset)]) = (__pyx_v_slice->shape[__pyx_v_i]); + (__pyx_v_mslice->shape[(__pyx_v_i + __pyx_v_offset)]) = (__pyx_v_mslice->shape[__pyx_v_i]); - /* "View.MemoryView":1302 + /* "View.MemoryView":1345 * for i in range(ndim - 1, -1, -1): - * slice.shape[i + offset] = slice.shape[i] - * slice.strides[i + offset] = slice.strides[i] # <<<<<<<<<<<<<< - * slice.suboffsets[i + offset] = slice.suboffsets[i] + * mslice.shape[i + offset] = mslice.shape[i] + * mslice.strides[i + offset] = mslice.strides[i] # <<<<<<<<<<<<<< + * mslice.suboffsets[i + offset] = mslice.suboffsets[i] * */ - (__pyx_v_slice->strides[(__pyx_v_i + __pyx_v_offset)]) = (__pyx_v_slice->strides[__pyx_v_i]); + (__pyx_v_mslice->strides[(__pyx_v_i + __pyx_v_offset)]) = (__pyx_v_mslice->strides[__pyx_v_i]); - /* "View.MemoryView":1303 - * slice.shape[i + offset] = slice.shape[i] - * slice.strides[i + offset] = slice.strides[i] - * slice.suboffsets[i + offset] = slice.suboffsets[i] # <<<<<<<<<<<<<< + /* "View.MemoryView":1346 + * mslice.shape[i + offset] = mslice.shape[i] + * mslice.strides[i + offset] = mslice.strides[i] + * mslice.suboffsets[i + offset] = mslice.suboffsets[i] # <<<<<<<<<<<<<< * * for i in range(offset): */ - (__pyx_v_slice->suboffsets[(__pyx_v_i + __pyx_v_offset)]) = (__pyx_v_slice->suboffsets[__pyx_v_i]); + (__pyx_v_mslice->suboffsets[(__pyx_v_i + __pyx_v_offset)]) = (__pyx_v_mslice->suboffsets[__pyx_v_i]); } - /* "View.MemoryView":1305 - * slice.suboffsets[i + offset] = slice.suboffsets[i] + /* "View.MemoryView":1348 + * mslice.suboffsets[i + offset] = mslice.suboffsets[i] * * for i in range(offset): # <<<<<<<<<<<<<< - * slice.shape[i] = 1 - * slice.strides[i] = slice.strides[0] + * mslice.shape[i] = 1 + * mslice.strides[i] = mslice.strides[0] */ __pyx_t_1 = __pyx_v_offset; - for (__pyx_t_2 = 0; __pyx_t_2 < __pyx_t_1; __pyx_t_2+=1) { - __pyx_v_i = __pyx_t_2; + __pyx_t_2 = __pyx_t_1; + for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) { + __pyx_v_i = __pyx_t_3; - /* "View.MemoryView":1306 + /* "View.MemoryView":1349 * * for i in range(offset): - * slice.shape[i] = 1 # <<<<<<<<<<<<<< - * slice.strides[i] = slice.strides[0] - * slice.suboffsets[i] = -1 + * mslice.shape[i] = 1 # <<<<<<<<<<<<<< + * mslice.strides[i] = mslice.strides[0] + * mslice.suboffsets[i] = -1 */ - (__pyx_v_slice->shape[__pyx_v_i]) = 1; + (__pyx_v_mslice->shape[__pyx_v_i]) = 1; - /* "View.MemoryView":1307 + /* "View.MemoryView":1350 * for i in range(offset): - * slice.shape[i] = 1 - * slice.strides[i] = slice.strides[0] # <<<<<<<<<<<<<< - * slice.suboffsets[i] = -1 + * mslice.shape[i] = 1 + * mslice.strides[i] = mslice.strides[0] # <<<<<<<<<<<<<< + * mslice.suboffsets[i] = -1 * */ - (__pyx_v_slice->strides[__pyx_v_i]) = (__pyx_v_slice->strides[0]); + (__pyx_v_mslice->strides[__pyx_v_i]) = (__pyx_v_mslice->strides[0]); - /* "View.MemoryView":1308 - * slice.shape[i] = 1 - * slice.strides[i] = slice.strides[0] - * slice.suboffsets[i] = -1 # <<<<<<<<<<<<<< + /* "View.MemoryView":1351 + * mslice.shape[i] = 1 + * mslice.strides[i] = mslice.strides[0] + * mslice.suboffsets[i] = -1 # <<<<<<<<<<<<<< * * */ - (__pyx_v_slice->suboffsets[__pyx_v_i]) = -1; + (__pyx_v_mslice->suboffsets[__pyx_v_i]) = -1L; } - /* "View.MemoryView":1294 + /* "View.MemoryView":1337 * * @cname('__pyx_memoryview_broadcast_leading') - * cdef void broadcast_leading(__Pyx_memviewslice *slice, # <<<<<<<<<<<<<< + * cdef void broadcast_leading(__Pyx_memviewslice *mslice, # <<<<<<<<<<<<<< * int ndim, * int ndim_other) nogil: */ @@ -16153,7 +18937,7 @@ static void __pyx_memoryview_broadcast_leading(__Pyx_memviewslice *__pyx_v_slice /* function exit code */ } -/* "View.MemoryView":1316 +/* "View.MemoryView":1359 * * 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__pyx_memoryview_refcount_objects_in_slice_with_gil(__pyx_v_dst->data, __pyx_v_dst->shape, __pyx_v_dst->strides, __pyx_v_ndim, __pyx_v_inc); - goto __pyx_L3; - } - __pyx_L3:; - /* "View.MemoryView":1316 + /* "View.MemoryView":1363 + * + * + * if dtype_is_object: # <<<<<<<<<<<<<< + * refcount_objects_in_slice_with_gil(dst.data, dst.shape, + * dst.strides, ndim, inc) + */ + } + + /* "View.MemoryView":1359 * * @cname('__pyx_memoryview_refcount_copying') * cdef void refcount_copying(__Pyx_memviewslice *dst, bint dtype_is_object, # <<<<<<<<<<<<<< @@ -16197,7 +18987,7 @@ static void __pyx_memoryview_refcount_copying(__Pyx_memviewslice *__pyx_v_dst, i /* function exit code */ } -/* "View.MemoryView":1325 +/* "View.MemoryView":1368 * * @cname('__pyx_memoryview_refcount_objects_in_slice_with_gil') * cdef void refcount_objects_in_slice_with_gil(char *data, Py_ssize_t *shape, # <<<<<<<<<<<<<< @@ -16208,11 +18998,11 @@ static void __pyx_memoryview_refcount_copying(__Pyx_memviewslice *__pyx_v_dst, i static void __pyx_memoryview_refcount_objects_in_slice_with_gil(char *__pyx_v_data, Py_ssize_t *__pyx_v_shape, Py_ssize_t *__pyx_v_strides, int __pyx_v_ndim, int __pyx_v_inc) { __Pyx_RefNannyDeclarations #ifdef WITH_THREAD - PyGILState_STATE __pyx_gilstate_save = PyGILState_Ensure(); + PyGILState_STATE __pyx_gilstate_save = __Pyx_PyGILState_Ensure(); #endif __Pyx_RefNannySetupContext("refcount_objects_in_slice_with_gil", 0); - /* "View.MemoryView":1328 + /* "View.MemoryView":1371 * Py_ssize_t *strides, int ndim, * bint inc) with gil: * refcount_objects_in_slice(data, shape, strides, ndim, inc) # <<<<<<<<<<<<<< @@ -16221,7 +19011,7 @@ static void __pyx_memoryview_refcount_objects_in_slice_with_gil(char *__pyx_v_da */ __pyx_memoryview_refcount_objects_in_slice(__pyx_v_data, __pyx_v_shape, __pyx_v_strides, __pyx_v_ndim, __pyx_v_inc); - /* "View.MemoryView":1325 + /* "View.MemoryView":1368 * * @cname('__pyx_memoryview_refcount_objects_in_slice_with_gil') * cdef void refcount_objects_in_slice_with_gil(char *data, Py_ssize_t *shape, # <<<<<<<<<<<<<< @@ -16232,11 +19022,11 @@ static void __pyx_memoryview_refcount_objects_in_slice_with_gil(char *__pyx_v_da /* function exit code */ __Pyx_RefNannyFinishContext(); #ifdef WITH_THREAD - PyGILState_Release(__pyx_gilstate_save); + __Pyx_PyGILState_Release(__pyx_gilstate_save); #endif } -/* "View.MemoryView":1331 +/* "View.MemoryView":1374 * * @cname('__pyx_memoryview_refcount_objects_in_slice') * cdef void refcount_objects_in_slice(char *data, Py_ssize_t *shape, # <<<<<<<<<<<<<< @@ -16249,10 +19039,11 @@ static void __pyx_memoryview_refcount_objects_in_slice(char *__pyx_v_data, Py_ss __Pyx_RefNannyDeclarations Py_ssize_t __pyx_t_1; Py_ssize_t __pyx_t_2; - int __pyx_t_3; + Py_ssize_t __pyx_t_3; + int __pyx_t_4; __Pyx_RefNannySetupContext("refcount_objects_in_slice", 0); - /* "View.MemoryView":1335 + /* "View.MemoryView":1378 * cdef Py_ssize_t i * * for i in range(shape[0]): # <<<<<<<<<<<<<< @@ -16260,30 +19051,31 @@ static void __pyx_memoryview_refcount_objects_in_slice(char *__pyx_v_data, Py_ss * if inc: */ __pyx_t_1 = (__pyx_v_shape[0]); - for (__pyx_t_2 = 0; __pyx_t_2 < __pyx_t_1; __pyx_t_2+=1) { - __pyx_v_i = __pyx_t_2; + __pyx_t_2 = __pyx_t_1; + for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) { + __pyx_v_i = __pyx_t_3; - /* "View.MemoryView":1336 + /* "View.MemoryView":1379 * * for i in range(shape[0]): * if ndim == 1: # <<<<<<<<<<<<<< * if inc: * Py_INCREF(( data)[0]) */ - __pyx_t_3 = ((__pyx_v_ndim == 1) != 0); - if (__pyx_t_3) { + __pyx_t_4 = ((__pyx_v_ndim == 1) != 0); + if (__pyx_t_4) { - /* "View.MemoryView":1337 + /* "View.MemoryView":1380 * for i in range(shape[0]): * if ndim == 1: * if inc: # <<<<<<<<<<<<<< * Py_INCREF(( data)[0]) * else: */ - __pyx_t_3 = (__pyx_v_inc != 0); - if (__pyx_t_3) { + __pyx_t_4 = (__pyx_v_inc != 0); + if (__pyx_t_4) { - /* "View.MemoryView":1338 + /* "View.MemoryView":1381 * if ndim == 1: * if inc: * Py_INCREF(( data)[0]) # 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+ /*else*/ { + + /* "View.MemoryView":1386 + * else: + * refcount_objects_in_slice(data, shape + 1, strides + 1, + * ndim - 1, inc) # <<<<<<<<<<<<<< + * + * data += strides[0] */ __pyx_memoryview_refcount_objects_in_slice(__pyx_v_data, (__pyx_v_shape + 1), (__pyx_v_strides + 1), (__pyx_v_ndim - 1), __pyx_v_inc); } __pyx_L5:; - /* "View.MemoryView":1345 + /* "View.MemoryView":1388 * ndim - 1, inc) * * data += strides[0] # <<<<<<<<<<<<<< @@ -16330,7 +19146,7 @@ static void __pyx_memoryview_refcount_objects_in_slice(char *__pyx_v_data, Py_ss __pyx_v_data = (__pyx_v_data + (__pyx_v_strides[0])); } - /* "View.MemoryView":1331 + /* "View.MemoryView":1374 * * @cname('__pyx_memoryview_refcount_objects_in_slice') * cdef void refcount_objects_in_slice(char *data, Py_ssize_t *shape, # <<<<<<<<<<<<<< @@ -16342,7 +19158,7 @@ static void __pyx_memoryview_refcount_objects_in_slice(char *__pyx_v_data, Py_ss __Pyx_RefNannyFinishContext(); } -/* "View.MemoryView":1351 +/* "View.MemoryView":1394 * * 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ndim, # <<<<<<<<<<<<<< @@ -16370,7 +19186,7 @@ static void __pyx_memoryview_slice_assign_scalar(__Pyx_memviewslice *__pyx_v_dst */ __pyx_memoryview__slice_assign_scalar(__pyx_v_dst->data, __pyx_v_dst->shape, __pyx_v_dst->strides, __pyx_v_ndim, __pyx_v_itemsize, __pyx_v_item); - /* "View.MemoryView":1357 + /* "View.MemoryView":1400 * _slice_assign_scalar(dst.data, dst.shape, dst.strides, ndim, * itemsize, item) * refcount_copying(dst, dtype_is_object, ndim, True) # <<<<<<<<<<<<<< @@ -16379,7 +19195,7 @@ static void __pyx_memoryview_slice_assign_scalar(__Pyx_memviewslice *__pyx_v_dst */ __pyx_memoryview_refcount_copying(__pyx_v_dst, __pyx_v_dtype_is_object, __pyx_v_ndim, 1); - /* "View.MemoryView":1351 + /* "View.MemoryView":1394 * * @cname('__pyx_memoryview_slice_assign_scalar') * cdef void slice_assign_scalar(__Pyx_memviewslice *dst, int ndim, # <<<<<<<<<<<<<< @@ -16390,7 +19206,7 @@ static void __pyx_memoryview_slice_assign_scalar(__Pyx_memviewslice *__pyx_v_dst /* function exit code */ } -/* "View.MemoryView":1361 +/* "View.MemoryView":1404 * * @cname('__pyx_memoryview__slice_assign_scalar') * cdef void _slice_assign_scalar(char *data, Py_ssize_t *shape, # <<<<<<<<<<<<<< @@ -16405,8 +19221,9 @@ static void __pyx_memoryview__slice_assign_scalar(char *__pyx_v_data, Py_ssize_t int __pyx_t_1; Py_ssize_t __pyx_t_2; Py_ssize_t __pyx_t_3; + Py_ssize_t __pyx_t_4; - /* "View.MemoryView":1365 + /* "View.MemoryView":1408 * size_t itemsize, void *item) nogil: * cdef Py_ssize_t i * cdef Py_ssize_t stride = strides[0] # <<<<<<<<<<<<<< @@ -16415,7 +19232,7 @@ static void __pyx_memoryview__slice_assign_scalar(char *__pyx_v_data, Py_ssize_t */ __pyx_v_stride = (__pyx_v_strides[0]); - /* "View.MemoryView":1366 + /* "View.MemoryView":1409 * cdef Py_ssize_t i * cdef Py_ssize_t stride = strides[0] * cdef Py_ssize_t extent = shape[0] # <<<<<<<<<<<<<< @@ -16424,7 +19241,7 @@ static void __pyx_memoryview__slice_assign_scalar(char *__pyx_v_data, Py_ssize_t */ __pyx_v_extent = (__pyx_v_shape[0]); - /* "View.MemoryView":1368 + /* "View.MemoryView":1411 * cdef Py_ssize_t extent = shape[0] * * if ndim == 1: # <<<<<<<<<<<<<< @@ -16434,7 +19251,7 @@ static void __pyx_memoryview__slice_assign_scalar(char *__pyx_v_data, Py_ssize_t __pyx_t_1 = ((__pyx_v_ndim == 1) != 0); if (__pyx_t_1) { - /* "View.MemoryView":1369 + /* "View.MemoryView":1412 * * if ndim == 1: * for i in range(extent): # <<<<<<<<<<<<<< @@ -16442,19 +19259,20 @@ static void __pyx_memoryview__slice_assign_scalar(char *__pyx_v_data, Py_ssize_t * data += stride */ __pyx_t_2 = __pyx_v_extent; - for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) { - __pyx_v_i = __pyx_t_3; + __pyx_t_3 = __pyx_t_2; + for (__pyx_t_4 = 0; __pyx_t_4 < __pyx_t_3; __pyx_t_4+=1) { + __pyx_v_i = __pyx_t_4; - /* "View.MemoryView":1370 + /* "View.MemoryView":1413 * if ndim == 1: * for i in range(extent): * memcpy(data, item, itemsize) # <<<<<<<<<<<<<< * data += stride * else: */ - memcpy(__pyx_v_data, __pyx_v_item, __pyx_v_itemsize); + (void)(memcpy(__pyx_v_data, __pyx_v_item, __pyx_v_itemsize)); - /* "View.MemoryView":1371 + /* "View.MemoryView":1414 * for i in range(extent): * memcpy(data, item, itemsize) * data += stride # <<<<<<<<<<<<<< @@ -16463,22 +19281,31 @@ static void __pyx_memoryview__slice_assign_scalar(char *__pyx_v_data, Py_ssize_t */ __pyx_v_data = (__pyx_v_data + __pyx_v_stride); } + + /* "View.MemoryView":1411 + * cdef Py_ssize_t extent = shape[0] + * + * if ndim == 1: # <<<<<<<<<<<<<< + * for i in range(extent): + * memcpy(data, item, itemsize) + */ goto __pyx_L3; } - /*else*/ { - /* "View.MemoryView":1373 + /* "View.MemoryView":1416 * data += stride * else: * for i in range(extent): # <<<<<<<<<<<<<< * _slice_assign_scalar(data, shape + 1, strides + 1, * ndim - 1, itemsize, item) */ + /*else*/ { __pyx_t_2 = __pyx_v_extent; - for (__pyx_t_3 = 0; __pyx_t_3 < __pyx_t_2; __pyx_t_3+=1) { - __pyx_v_i = __pyx_t_3; + __pyx_t_3 = __pyx_t_2; + for (__pyx_t_4 = 0; __pyx_t_4 < __pyx_t_3; 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p->__pyx_vtab = __pyx_vtabptr_array; p->mode = ((PyObject*)Py_None); Py_INCREF(Py_None); p->_format = ((PyObject*)Py_None); Py_INCREF(Py_None); - if (unlikely(__pyx_array___cinit__(o, a, k) < 0)) { - Py_DECREF(o); o = 0; - } + if (unlikely(__pyx_array___cinit__(o, a, k) < 0)) goto bad; return o; + bad: + Py_DECREF(o); o = 0; + return NULL; } static void __pyx_tp_dealloc_array(PyObject *o) { struct __pyx_array_obj *p = (struct __pyx_array_obj *)o; - #if PY_VERSION_HEX >= 0x030400a1 - if (unlikely(Py_TYPE(o)->tp_finalize) && (!PyType_IS_GC(Py_TYPE(o)) || !_PyGC_FINALIZED(o))) { + #if CYTHON_USE_TP_FINALIZE + if (unlikely(PyType_HasFeature(Py_TYPE(o), Py_TPFLAGS_HAVE_FINALIZE) && Py_TYPE(o)->tp_finalize) && (!PyType_IS_GC(Py_TYPE(o)) || !_PyGC_FINALIZED(o))) { if (PyObject_CallFinalizerFromDealloc(o)) return; } #endif @@ -16567,7 +19785,7 @@ static int __pyx_mp_ass_subscript_array(PyObject *o, PyObject *i, PyObject *v) { } static PyObject *__pyx_tp_getattro_array(PyObject *o, PyObject *n) { - PyObject *v = PyObject_GenericGetAttr(o, n); + PyObject *v = __Pyx_PyObject_GenericGetAttr(o, n); if (!v && PyErr_ExceptionMatches(PyExc_AttributeError)) { PyErr_Clear(); v = __pyx_array___getattr__(o, n); @@ -16576,21 +19794,23 @@ static PyObject *__pyx_tp_getattro_array(PyObject *o, PyObject *n) { } static PyObject *__pyx_getprop___pyx_array_memview(PyObject *o, CYTHON_UNUSED void *x) { - return get_memview(o); + return __pyx_pw_15View_dot_MemoryView_5array_7memview_1__get__(o); } static PyMethodDef __pyx_methods_array[] = { {"__getattr__", (PyCFunction)__pyx_array___getattr__, METH_O|METH_COEXIST, 0}, + {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_array_1__reduce_cython__, METH_NOARGS, 0}, + {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_array_3__setstate_cython__, METH_O, 0}, {0, 0, 0, 0} }; static struct PyGetSetDef __pyx_getsets_array[] = { - {(char *)"memview", __pyx_getprop___pyx_array_memview, 0, 0, 0}, + {(char *)"memview", __pyx_getprop___pyx_array_memview, 0, (char *)0, 0}, {0, 0, 0, 0, 0} }; static PySequenceMethods __pyx_tp_as_sequence_array = { - 0, /*sq_length*/ + __pyx_array___len__, /*sq_length*/ 0, /*sq_concat*/ 0, /*sq_repeat*/ __pyx_sq_item_array, /*sq_item*/ @@ -16603,7 +19823,7 @@ static PySequenceMethods __pyx_tp_as_sequence_array = { }; static PyMappingMethods __pyx_tp_as_mapping_array = { - 0, /*mp_length*/ + __pyx_array___len__, /*mp_length*/ __pyx_array___getitem__, /*mp_subscript*/ __pyx_mp_ass_subscript_array, /*mp_ass_subscript*/ }; @@ -16636,8 +19856,9 @@ static PyTypeObject __pyx_type___pyx_array = { 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ - #else - 0, /*reserved*/ + #endif + #if PY_MAJOR_VERSION >= 3 + 0, /*tp_as_async*/ #endif 0, /*tp_repr*/ 0, /*tp_as_number*/ @@ -16698,8 +19919,8 @@ static PyObject *__pyx_tp_new_Enum(PyTypeObject *t, CYTHON_UNUSED PyObject *a, C static void __pyx_tp_dealloc_Enum(PyObject *o) { struct __pyx_MemviewEnum_obj *p = (struct __pyx_MemviewEnum_obj *)o; - #if PY_VERSION_HEX >= 0x030400a1 - if (unlikely(Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) { + #if CYTHON_USE_TP_FINALIZE + if (unlikely(PyType_HasFeature(Py_TYPE(o), Py_TPFLAGS_HAVE_FINALIZE) && Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) { if (PyObject_CallFinalizerFromDealloc(o)) return; } #endif @@ -16727,6 +19948,8 @@ static int __pyx_tp_clear_Enum(PyObject *o) { } static PyMethodDef __pyx_methods_Enum[] = { + {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_MemviewEnum_1__reduce_cython__, METH_NOARGS, 0}, + {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_MemviewEnum_3__setstate_cython__, METH_O, 0}, {0, 0, 0, 0} }; @@ -16741,8 +19964,9 @@ static PyTypeObject __pyx_type___pyx_MemviewEnum = { 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ - #else - 0, /*reserved*/ + #endif + #if PY_MAJOR_VERSION >= 3 + 0, /*tp_as_async*/ #endif __pyx_MemviewEnum___repr__, /*tp_repr*/ 0, /*tp_as_number*/ @@ -16803,16 +20027,17 @@ static PyObject *__pyx_tp_new_memoryview(PyTypeObject *t, PyObject *a, PyObject p->_size = Py_None; Py_INCREF(Py_None); p->_array_interface = Py_None; Py_INCREF(Py_None); p->view.obj = NULL; - if (unlikely(__pyx_memoryview___cinit__(o, a, k) < 0)) { - Py_DECREF(o); o = 0; - } + if (unlikely(__pyx_memoryview___cinit__(o, a, k) < 0)) goto bad; return o; + bad: + Py_DECREF(o); o = 0; + return NULL; } static void __pyx_tp_dealloc_memoryview(PyObject *o) { struct __pyx_memoryview_obj *p = (struct __pyx_memoryview_obj *)o; - #if PY_VERSION_HEX >= 0x030400a1 - if (unlikely(Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) { + #if CYTHON_USE_TP_FINALIZE + if (unlikely(PyType_HasFeature(Py_TYPE(o), Py_TPFLAGS_HAVE_FINALIZE) && Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) { if (PyObject_CallFinalizerFromDealloc(o)) return; } #endif @@ -16884,39 +20109,39 @@ static int __pyx_mp_ass_subscript_memoryview(PyObject *o, PyObject *i, PyObject } static PyObject *__pyx_getprop___pyx_memoryview_T(PyObject *o, CYTHON_UNUSED void *x) { - return __pyx_memoryview_transpose(o); + return __pyx_pw_15View_dot_MemoryView_10memoryview_1T_1__get__(o); } static PyObject *__pyx_getprop___pyx_memoryview_base(PyObject *o, CYTHON_UNUSED void *x) { - return __pyx_memoryview__get__base(o); + return __pyx_pw_15View_dot_MemoryView_10memoryview_4base_1__get__(o); } static PyObject *__pyx_getprop___pyx_memoryview_shape(PyObject *o, CYTHON_UNUSED void *x) { - return __pyx_memoryview_get_shape(o); + return __pyx_pw_15View_dot_MemoryView_10memoryview_5shape_1__get__(o); } static PyObject *__pyx_getprop___pyx_memoryview_strides(PyObject *o, CYTHON_UNUSED void *x) { - return __pyx_memoryview_get_strides(o); + return __pyx_pw_15View_dot_MemoryView_10memoryview_7strides_1__get__(o); } static PyObject *__pyx_getprop___pyx_memoryview_suboffsets(PyObject *o, CYTHON_UNUSED void *x) { - return __pyx_memoryview_get_suboffsets(o); + return __pyx_pw_15View_dot_MemoryView_10memoryview_10suboffsets_1__get__(o); } static PyObject *__pyx_getprop___pyx_memoryview_ndim(PyObject *o, CYTHON_UNUSED void *x) { - return __pyx_memoryview_get_ndim(o); + return __pyx_pw_15View_dot_MemoryView_10memoryview_4ndim_1__get__(o); } static PyObject *__pyx_getprop___pyx_memoryview_itemsize(PyObject *o, CYTHON_UNUSED void *x) { - return __pyx_memoryview_get_itemsize(o); + return __pyx_pw_15View_dot_MemoryView_10memoryview_8itemsize_1__get__(o); } static PyObject *__pyx_getprop___pyx_memoryview_nbytes(PyObject *o, CYTHON_UNUSED void *x) { - return __pyx_memoryview_get_nbytes(o); + return __pyx_pw_15View_dot_MemoryView_10memoryview_6nbytes_1__get__(o); } static PyObject *__pyx_getprop___pyx_memoryview_size(PyObject *o, CYTHON_UNUSED void *x) { - return __pyx_memoryview_get_size(o); + return __pyx_pw_15View_dot_MemoryView_10memoryview_4size_1__get__(o); } static PyMethodDef __pyx_methods_memoryview[] = { @@ -16924,19 +20149,21 @@ static PyMethodDef __pyx_methods_memoryview[] = { {"is_f_contig", (PyCFunction)__pyx_memoryview_is_f_contig, METH_NOARGS, 0}, {"copy", (PyCFunction)__pyx_memoryview_copy, METH_NOARGS, 0}, {"copy_fortran", (PyCFunction)__pyx_memoryview_copy_fortran, METH_NOARGS, 0}, + {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_memoryview_1__reduce_cython__, METH_NOARGS, 0}, + {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_memoryview_3__setstate_cython__, METH_O, 0}, {0, 0, 0, 0} }; static struct PyGetSetDef __pyx_getsets_memoryview[] = { - {(char *)"T", __pyx_getprop___pyx_memoryview_T, 0, 0, 0}, - {(char *)"base", __pyx_getprop___pyx_memoryview_base, 0, 0, 0}, - {(char *)"shape", __pyx_getprop___pyx_memoryview_shape, 0, 0, 0}, - {(char *)"strides", __pyx_getprop___pyx_memoryview_strides, 0, 0, 0}, - {(char *)"suboffsets", __pyx_getprop___pyx_memoryview_suboffsets, 0, 0, 0}, - {(char *)"ndim", __pyx_getprop___pyx_memoryview_ndim, 0, 0, 0}, - {(char *)"itemsize", __pyx_getprop___pyx_memoryview_itemsize, 0, 0, 0}, - {(char *)"nbytes", __pyx_getprop___pyx_memoryview_nbytes, 0, 0, 0}, - {(char *)"size", __pyx_getprop___pyx_memoryview_size, 0, 0, 0}, + {(char *)"T", __pyx_getprop___pyx_memoryview_T, 0, (char *)0, 0}, + {(char *)"base", __pyx_getprop___pyx_memoryview_base, 0, (char *)0, 0}, + {(char *)"shape", __pyx_getprop___pyx_memoryview_shape, 0, (char *)0, 0}, + {(char *)"strides", __pyx_getprop___pyx_memoryview_strides, 0, (char *)0, 0}, + {(char *)"suboffsets", __pyx_getprop___pyx_memoryview_suboffsets, 0, (char *)0, 0}, + {(char *)"ndim", __pyx_getprop___pyx_memoryview_ndim, 0, (char *)0, 0}, + {(char *)"itemsize", __pyx_getprop___pyx_memoryview_itemsize, 0, (char *)0, 0}, + {(char *)"nbytes", __pyx_getprop___pyx_memoryview_nbytes, 0, (char *)0, 0}, + {(char *)"size", __pyx_getprop___pyx_memoryview_size, 0, (char *)0, 0}, {0, 0, 0, 0, 0} }; @@ -16987,8 +20214,9 @@ static PyTypeObject __pyx_type___pyx_memoryview = { 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ - #else - 0, /*reserved*/ + #endif + #if PY_MAJOR_VERSION >= 3 + 0, /*tp_as_async*/ #endif __pyx_memoryview___repr__, /*tp_repr*/ 0, /*tp_as_number*/ @@ -17047,8 +20275,8 @@ static PyObject *__pyx_tp_new__memoryviewslice(PyTypeObject *t, PyObject *a, PyO static void __pyx_tp_dealloc__memoryviewslice(PyObject *o) { struct __pyx_memoryviewslice_obj *p = (struct __pyx_memoryviewslice_obj *)o; - #if PY_VERSION_HEX >= 0x030400a1 - if (unlikely(Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) { + #if CYTHON_USE_TP_FINALIZE + if (unlikely(PyType_HasFeature(Py_TYPE(o), Py_TPFLAGS_HAVE_FINALIZE) && Py_TYPE(o)->tp_finalize) && !_PyGC_FINALIZED(o)) { if (PyObject_CallFinalizerFromDealloc(o)) return; } #endif @@ -17088,15 +20316,17 @@ static int __pyx_tp_clear__memoryviewslice(PyObject *o) { } static PyObject *__pyx_getprop___pyx_memoryviewslice_base(PyObject *o, CYTHON_UNUSED void *x) { - return __pyx_memoryviewslice__get__base(o); + return __pyx_pw_15View_dot_MemoryView_16_memoryviewslice_4base_1__get__(o); } static PyMethodDef __pyx_methods__memoryviewslice[] = { + {"__reduce_cython__", (PyCFunction)__pyx_pw___pyx_memoryviewslice_1__reduce_cython__, METH_NOARGS, 0}, + {"__setstate_cython__", (PyCFunction)__pyx_pw___pyx_memoryviewslice_3__setstate_cython__, METH_O, 0}, {0, 0, 0, 0} }; static struct PyGetSetDef __pyx_getsets__memoryviewslice[] = { - {(char *)"base", __pyx_getprop___pyx_memoryviewslice_base, 0, 0, 0}, + {(char *)"base", __pyx_getprop___pyx_memoryviewslice_base, 0, (char *)0, 0}, {0, 0, 0, 0, 0} }; @@ -17111,8 +20341,9 @@ static PyTypeObject __pyx_type___pyx_memoryviewslice = { 0, /*tp_setattr*/ #if PY_MAJOR_VERSION < 3 0, /*tp_compare*/ - #else - 0, /*reserved*/ + #endif + #if PY_MAJOR_VERSION >= 3 + 0, /*tp_as_async*/ #endif #if CYTHON_COMPILING_IN_PYPY __pyx_memoryview___repr__, /*tp_repr*/ @@ -17170,26 +20401,52 @@ static PyMethodDef __pyx_methods[] = { }; #if PY_MAJOR_VERSION >= 3 +#if CYTHON_PEP489_MULTI_PHASE_INIT +static PyObject* __pyx_pymod_create(PyObject *spec, PyModuleDef *def); /*proto*/ +static int __pyx_pymod_exec_choleskies_cython(PyObject* module); /*proto*/ +static PyModuleDef_Slot __pyx_moduledef_slots[] = { + {Py_mod_create, (void*)__pyx_pymod_create}, + {Py_mod_exec, (void*)__pyx_pymod_exec_choleskies_cython}, + {0, NULL} +}; +#endif + static struct PyModuleDef __pyx_moduledef = { - #if PY_VERSION_HEX < 0x03020000 - { PyObject_HEAD_INIT(NULL) NULL, 0, NULL }, - #else PyModuleDef_HEAD_INIT, - #endif "choleskies_cython", 0, /* m_doc */ + #if CYTHON_PEP489_MULTI_PHASE_INIT + 0, /* m_size */ + #else -1, /* m_size */ + #endif __pyx_methods /* m_methods */, + #if CYTHON_PEP489_MULTI_PHASE_INIT + __pyx_moduledef_slots, /* m_slots */ + #else NULL, /* m_reload */ + #endif NULL, /* m_traverse */ NULL, /* m_clear */ NULL /* m_free */ }; #endif +#ifndef CYTHON_SMALL_CODE +#if defined(__clang__) + #define CYTHON_SMALL_CODE +#elif defined(__GNUC__) && (__GNUC__ > 4 || (__GNUC__ == 4 && __GNUC_MINOR__ >= 3)) + #define CYTHON_SMALL_CODE __attribute__((cold)) +#else + #define CYTHON_SMALL_CODE +#endif +#endif static __Pyx_StringTabEntry __pyx_string_tab[] = { + {&__pyx_n_s_ASCII, __pyx_k_ASCII, sizeof(__pyx_k_ASCII), 0, 0, 1, 1}, {&__pyx_kp_s_Buffer_view_does_not_expose_stri, __pyx_k_Buffer_view_does_not_expose_stri, sizeof(__pyx_k_Buffer_view_does_not_expose_stri), 0, 0, 1, 0}, {&__pyx_kp_s_Can_only_create_a_buffer_that_is, __pyx_k_Can_only_create_a_buffer_that_is, sizeof(__pyx_k_Can_only_create_a_buffer_that_is), 0, 0, 1, 0}, + {&__pyx_kp_s_Cannot_assign_to_read_only_memor, __pyx_k_Cannot_assign_to_read_only_memor, sizeof(__pyx_k_Cannot_assign_to_read_only_memor), 0, 0, 1, 0}, + {&__pyx_kp_s_Cannot_create_writable_memory_vi, __pyx_k_Cannot_create_writable_memory_vi, sizeof(__pyx_k_Cannot_create_writable_memory_vi), 0, 0, 1, 0}, {&__pyx_kp_s_Cannot_index_with_type_s, __pyx_k_Cannot_index_with_type_s, sizeof(__pyx_k_Cannot_index_with_type_s), 0, 0, 1, 0}, {&__pyx_n_s_D, __pyx_k_D, sizeof(__pyx_k_D), 0, 0, 1, 1}, {&__pyx_n_s_Ellipsis, __pyx_k_Ellipsis, sizeof(__pyx_k_Ellipsis), 0, 0, 1, 1}, @@ -17197,6 +20454,9 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_kp_u_Format_string_allocated_too_shor, __pyx_k_Format_string_allocated_too_shor, sizeof(__pyx_k_Format_string_allocated_too_shor), 0, 1, 0, 0}, {&__pyx_kp_u_Format_string_allocated_too_shor_2, __pyx_k_Format_string_allocated_too_shor_2, sizeof(__pyx_k_Format_string_allocated_too_shor_2), 0, 1, 0, 0}, {&__pyx_n_s_GPy_util_choleskies_cython, __pyx_k_GPy_util_choleskies_cython, sizeof(__pyx_k_GPy_util_choleskies_cython), 0, 0, 1, 1}, + {&__pyx_kp_s_GPy_util_choleskies_cython_pyx, __pyx_k_GPy_util_choleskies_cython_pyx, sizeof(__pyx_k_GPy_util_choleskies_cython_pyx), 0, 0, 1, 0}, + {&__pyx_n_s_ImportError, __pyx_k_ImportError, sizeof(__pyx_k_ImportError), 0, 0, 1, 1}, + {&__pyx_kp_s_Incompatible_checksums_s_vs_0xb0, __pyx_k_Incompatible_checksums_s_vs_0xb0, sizeof(__pyx_k_Incompatible_checksums_s_vs_0xb0), 0, 0, 1, 0}, {&__pyx_n_s_IndexError, __pyx_k_IndexError, sizeof(__pyx_k_IndexError), 0, 0, 1, 1}, {&__pyx_kp_s_Indirect_dimensions_not_supporte, __pyx_k_Indirect_dimensions_not_supporte, sizeof(__pyx_k_Indirect_dimensions_not_supporte), 0, 0, 1, 0}, {&__pyx_kp_s_Invalid_mode_expected_c_or_fortr, __pyx_k_Invalid_mode_expected_c_or_fortr, sizeof(__pyx_k_Invalid_mode_expected_c_or_fortr), 0, 0, 1, 0}, @@ -17211,11 +20471,12 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_kp_u_Non_native_byte_order_not_suppor, __pyx_k_Non_native_byte_order_not_suppor, sizeof(__pyx_k_Non_native_byte_order_not_suppor), 0, 1, 0, 0}, {&__pyx_n_b_O, __pyx_k_O, sizeof(__pyx_k_O), 0, 0, 0, 1}, {&__pyx_kp_s_Out_of_bounds_on_buffer_access_a, __pyx_k_Out_of_bounds_on_buffer_access_a, sizeof(__pyx_k_Out_of_bounds_on_buffer_access_a), 0, 0, 1, 0}, + {&__pyx_n_s_PickleError, __pyx_k_PickleError, sizeof(__pyx_k_PickleError), 0, 0, 1, 1}, {&__pyx_n_s_RuntimeError, __pyx_k_RuntimeError, sizeof(__pyx_k_RuntimeError), 0, 0, 1, 1}, {&__pyx_n_s_TypeError, __pyx_k_TypeError, sizeof(__pyx_k_TypeError), 0, 0, 1, 1}, {&__pyx_kp_s_Unable_to_convert_item_to_object, __pyx_k_Unable_to_convert_item_to_object, sizeof(__pyx_k_Unable_to_convert_item_to_object), 0, 0, 1, 0}, - {&__pyx_kp_s_Users_james_work_GPy_GPy_util_c, __pyx_k_Users_james_work_GPy_GPy_util_c, sizeof(__pyx_k_Users_james_work_GPy_GPy_util_c), 0, 0, 1, 0}, {&__pyx_n_s_ValueError, __pyx_k_ValueError, sizeof(__pyx_k_ValueError), 0, 0, 1, 1}, + {&__pyx_n_s_View_MemoryView, __pyx_k_View_MemoryView, sizeof(__pyx_k_View_MemoryView), 0, 0, 1, 1}, {&__pyx_n_s_allocate_buffer, __pyx_k_allocate_buffer, sizeof(__pyx_k_allocate_buffer), 0, 0, 1, 1}, {&__pyx_n_s_asarray, __pyx_k_asarray, sizeof(__pyx_k_asarray), 0, 0, 1, 1}, {&__pyx_n_s_ascontiguousarray, __pyx_k_ascontiguousarray, sizeof(__pyx_k_ascontiguousarray), 0, 0, 1, 1}, @@ -17226,14 +20487,17 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_n_s_c, __pyx_k_c, sizeof(__pyx_k_c), 0, 0, 1, 1}, {&__pyx_n_u_c, __pyx_k_c, sizeof(__pyx_k_c), 0, 1, 0, 1}, {&__pyx_n_s_class, __pyx_k_class, sizeof(__pyx_k_class), 0, 0, 1, 1}, + {&__pyx_n_s_cline_in_traceback, __pyx_k_cline_in_traceback, sizeof(__pyx_k_cline_in_traceback), 0, 0, 1, 1}, {&__pyx_kp_s_contiguous_and_direct, __pyx_k_contiguous_and_direct, sizeof(__pyx_k_contiguous_and_direct), 0, 0, 1, 0}, {&__pyx_kp_s_contiguous_and_indirect, __pyx_k_contiguous_and_indirect, sizeof(__pyx_k_contiguous_and_indirect), 0, 0, 1, 0}, {&__pyx_n_s_count, __pyx_k_count, sizeof(__pyx_k_count), 0, 0, 1, 1}, {&__pyx_n_s_d, __pyx_k_d, sizeof(__pyx_k_d), 0, 0, 1, 1}, {&__pyx_n_s_dL, __pyx_k_dL, sizeof(__pyx_k_dL), 0, 0, 1, 1}, {&__pyx_n_s_dL_dK, __pyx_k_dL_dK, sizeof(__pyx_k_dL_dK), 0, 0, 1, 1}, + {&__pyx_n_s_dict, __pyx_k_dict, sizeof(__pyx_k_dict), 0, 0, 1, 1}, {&__pyx_n_s_dtype_is_object, __pyx_k_dtype_is_object, sizeof(__pyx_k_dtype_is_object), 0, 0, 1, 1}, {&__pyx_n_s_empty, __pyx_k_empty, sizeof(__pyx_k_empty), 0, 0, 1, 1}, + {&__pyx_n_s_encode, __pyx_k_encode, sizeof(__pyx_k_encode), 0, 0, 1, 1}, {&__pyx_n_s_enumerate, __pyx_k_enumerate, sizeof(__pyx_k_enumerate), 0, 0, 1, 1}, {&__pyx_n_s_error, __pyx_k_error, sizeof(__pyx_k_error), 0, 0, 1, 1}, {&__pyx_n_s_flags, __pyx_k_flags, sizeof(__pyx_k_flags), 0, 0, 1, 1}, @@ -17242,6 +20506,7 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_n_s_format, __pyx_k_format, sizeof(__pyx_k_format), 0, 0, 1, 1}, {&__pyx_n_s_fortran, __pyx_k_fortran, sizeof(__pyx_k_fortran), 0, 0, 1, 1}, {&__pyx_n_u_fortran, __pyx_k_fortran, sizeof(__pyx_k_fortran), 0, 1, 0, 1}, + {&__pyx_n_s_getstate, __pyx_k_getstate, sizeof(__pyx_k_getstate), 0, 0, 1, 1}, {&__pyx_kp_s_got_differing_extents_in_dimensi, __pyx_k_got_differing_extents_in_dimensi, sizeof(__pyx_k_got_differing_extents_in_dimensi), 0, 0, 1, 0}, {&__pyx_n_s_i, __pyx_k_i, sizeof(__pyx_k_i), 0, 0, 1, 1}, {&__pyx_n_s_id, __pyx_k_id, sizeof(__pyx_k_id), 0, 0, 1, 1}, @@ -17260,14 +20525,30 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_kp_u_ndarray_is_not_C_contiguous, __pyx_k_ndarray_is_not_C_contiguous, sizeof(__pyx_k_ndarray_is_not_C_contiguous), 0, 1, 0, 0}, {&__pyx_kp_u_ndarray_is_not_Fortran_contiguou, __pyx_k_ndarray_is_not_Fortran_contiguou, sizeof(__pyx_k_ndarray_is_not_Fortran_contiguou), 0, 1, 0, 0}, {&__pyx_n_s_ndim, __pyx_k_ndim, sizeof(__pyx_k_ndim), 0, 0, 1, 1}, + {&__pyx_n_s_new, __pyx_k_new, sizeof(__pyx_k_new), 0, 0, 1, 1}, + {&__pyx_kp_s_no_default___reduce___due_to_non, __pyx_k_no_default___reduce___due_to_non, sizeof(__pyx_k_no_default___reduce___due_to_non), 0, 0, 1, 0}, {&__pyx_n_s_np, __pyx_k_np, sizeof(__pyx_k_np), 0, 0, 1, 1}, {&__pyx_n_s_numpy, __pyx_k_numpy, sizeof(__pyx_k_numpy), 0, 0, 1, 1}, + {&__pyx_kp_s_numpy_core_multiarray_failed_to, __pyx_k_numpy_core_multiarray_failed_to, sizeof(__pyx_k_numpy_core_multiarray_failed_to), 0, 0, 1, 0}, + {&__pyx_kp_s_numpy_core_umath_failed_to_impor, __pyx_k_numpy_core_umath_failed_to_impor, sizeof(__pyx_k_numpy_core_umath_failed_to_impor), 0, 0, 1, 0}, {&__pyx_n_s_obj, __pyx_k_obj, sizeof(__pyx_k_obj), 0, 0, 1, 1}, {&__pyx_n_s_pack, __pyx_k_pack, sizeof(__pyx_k_pack), 0, 0, 1, 1}, + {&__pyx_n_s_pickle, __pyx_k_pickle, sizeof(__pyx_k_pickle), 0, 0, 1, 1}, + {&__pyx_n_s_pyx_PickleError, __pyx_k_pyx_PickleError, sizeof(__pyx_k_pyx_PickleError), 0, 0, 1, 1}, + {&__pyx_n_s_pyx_checksum, __pyx_k_pyx_checksum, sizeof(__pyx_k_pyx_checksum), 0, 0, 1, 1}, {&__pyx_n_s_pyx_getbuffer, __pyx_k_pyx_getbuffer, sizeof(__pyx_k_pyx_getbuffer), 0, 0, 1, 1}, + {&__pyx_n_s_pyx_result, __pyx_k_pyx_result, sizeof(__pyx_k_pyx_result), 0, 0, 1, 1}, + {&__pyx_n_s_pyx_state, __pyx_k_pyx_state, sizeof(__pyx_k_pyx_state), 0, 0, 1, 1}, + {&__pyx_n_s_pyx_type, __pyx_k_pyx_type, sizeof(__pyx_k_pyx_type), 0, 0, 1, 1}, + {&__pyx_n_s_pyx_unpickle_Enum, __pyx_k_pyx_unpickle_Enum, sizeof(__pyx_k_pyx_unpickle_Enum), 0, 0, 1, 1}, {&__pyx_n_s_pyx_vtable, __pyx_k_pyx_vtable, sizeof(__pyx_k_pyx_vtable), 0, 0, 1, 1}, {&__pyx_n_s_range, __pyx_k_range, sizeof(__pyx_k_range), 0, 0, 1, 1}, + {&__pyx_n_s_reduce, __pyx_k_reduce, sizeof(__pyx_k_reduce), 0, 0, 1, 1}, + {&__pyx_n_s_reduce_cython, __pyx_k_reduce_cython, sizeof(__pyx_k_reduce_cython), 0, 0, 1, 1}, + {&__pyx_n_s_reduce_ex, __pyx_k_reduce_ex, sizeof(__pyx_k_reduce_ex), 0, 0, 1, 1}, {&__pyx_n_s_ret, __pyx_k_ret, sizeof(__pyx_k_ret), 0, 0, 1, 1}, + {&__pyx_n_s_setstate, __pyx_k_setstate, sizeof(__pyx_k_setstate), 0, 0, 1, 1}, + {&__pyx_n_s_setstate_cython, __pyx_k_setstate_cython, sizeof(__pyx_k_setstate_cython), 0, 0, 1, 1}, {&__pyx_n_s_shape, __pyx_k_shape, sizeof(__pyx_k_shape), 0, 0, 1, 1}, {&__pyx_n_s_size, __pyx_k_size, sizeof(__pyx_k_size), 0, 0, 1, 1}, {&__pyx_n_s_start, __pyx_k_start, sizeof(__pyx_k_start), 0, 0, 1, 1}, @@ -17276,6 +20557,7 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_kp_s_strided_and_direct, __pyx_k_strided_and_direct, sizeof(__pyx_k_strided_and_direct), 0, 0, 1, 0}, {&__pyx_kp_s_strided_and_direct_or_indirect, __pyx_k_strided_and_direct_or_indirect, sizeof(__pyx_k_strided_and_direct_or_indirect), 0, 0, 1, 0}, {&__pyx_kp_s_strided_and_indirect, __pyx_k_strided_and_indirect, sizeof(__pyx_k_strided_and_indirect), 0, 0, 1, 0}, + {&__pyx_kp_s_stringsource, __pyx_k_stringsource, sizeof(__pyx_k_stringsource), 0, 0, 1, 0}, {&__pyx_n_s_struct, __pyx_k_struct, sizeof(__pyx_k_struct), 0, 0, 1, 1}, {&__pyx_n_s_test, __pyx_k_test, sizeof(__pyx_k_test), 0, 0, 1, 1}, {&__pyx_n_s_triang_to_flat, __pyx_k_triang_to_flat, sizeof(__pyx_k_triang_to_flat), 0, 0, 1, 1}, @@ -17284,335 +20566,429 @@ static __Pyx_StringTabEntry __pyx_string_tab[] = { {&__pyx_kp_s_unable_to_allocate_shape_and_str, __pyx_k_unable_to_allocate_shape_and_str, sizeof(__pyx_k_unable_to_allocate_shape_and_str), 0, 0, 1, 0}, {&__pyx_kp_u_unknown_dtype_code_in_numpy_pxd, __pyx_k_unknown_dtype_code_in_numpy_pxd, sizeof(__pyx_k_unknown_dtype_code_in_numpy_pxd), 0, 1, 0, 0}, {&__pyx_n_s_unpack, __pyx_k_unpack, sizeof(__pyx_k_unpack), 0, 0, 1, 1}, + {&__pyx_n_s_update, __pyx_k_update, sizeof(__pyx_k_update), 0, 0, 1, 1}, {&__pyx_n_s_xrange, __pyx_k_xrange, sizeof(__pyx_k_xrange), 0, 0, 1, 1}, {&__pyx_n_s_zeros, __pyx_k_zeros, sizeof(__pyx_k_zeros), 0, 0, 1, 1}, {0, 0, 0, 0, 0, 0, 0} }; -static int __Pyx_InitCachedBuiltins(void) { - __pyx_builtin_range = __Pyx_GetBuiltinName(__pyx_n_s_range); if (!__pyx_builtin_range) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 25; __pyx_clineno = __LINE__; goto __pyx_L1_error;} +static CYTHON_SMALL_CODE int __Pyx_InitCachedBuiltins(void) { + __pyx_builtin_range = __Pyx_GetBuiltinName(__pyx_n_s_range); if (!__pyx_builtin_range) __PYX_ERR(0, 27, __pyx_L1_error) #if PY_MAJOR_VERSION >= 3 - __pyx_builtin_xrange = __Pyx_GetBuiltinName(__pyx_n_s_range); if (!__pyx_builtin_xrange) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 99; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_builtin_xrange = __Pyx_GetBuiltinName(__pyx_n_s_range); if 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__pyx_lineno = 953; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __Pyx_DECREF(__pyx_t_2); __pyx_t_2 = 0; + __pyx_t_1 = __pyx_capsule_create(((void *)(&__pyx_memoryview_getbuffer)), ((char *)"getbuffer(obj, view, flags)")); if (unlikely(!__pyx_t_1)) __PYX_ERR(2, 991, __pyx_L1_error) + __Pyx_GOTREF(__pyx_t_1); + if (PyDict_SetItem((PyObject *)__pyx_memoryviewslice_type->tp_dict, __pyx_n_s_pyx_getbuffer, __pyx_t_1) < 0) __PYX_ERR(2, 991, __pyx_L1_error) + __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; PyType_Modified(__pyx_memoryviewslice_type); - /* "View.MemoryView":1361 - * - * @cname('__pyx_memoryview__slice_assign_scalar') - * cdef void _slice_assign_scalar(char *data, Py_ssize_t *shape, # <<<<<<<<<<<<<< - * Py_ssize_t *strides, int ndim, - * size_t itemsize, void *item) nogil: + /* "(tree fragment)":1 + * def __pyx_unpickle_Enum(__pyx_type, long __pyx_checksum, __pyx_state): # <<<<<<<<<<<<<< + * cdef object __pyx_PickleError + * cdef object __pyx_result + */ + __pyx_t_1 = PyCFunction_NewEx(&__pyx_mdef_15View_dot_MemoryView_1__pyx_unpickle_Enum, NULL, __pyx_n_s_View_MemoryView); if (unlikely(!__pyx_t_1)) __PYX_ERR(2, 1, __pyx_L1_error) + __Pyx_GOTREF(__pyx_t_1); + if (PyDict_SetItem(__pyx_d, __pyx_n_s_pyx_unpickle_Enum, __pyx_t_1) < 0) __PYX_ERR(2, 1, __pyx_L1_error) + __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; + + /* "(tree fragment)":11 + * __pyx_unpickle_Enum__set_state( __pyx_result, __pyx_state) + * return __pyx_result + * cdef __pyx_unpickle_Enum__set_state(Enum __pyx_result, tuple __pyx_state): # <<<<<<<<<<<<<< + * __pyx_result.name = __pyx_state[0] + * if len(__pyx_state) > 1 and hasattr(__pyx_result, '__dict__'): */ /*--- Wrapped vars code ---*/ @@ -17976,33 +21617,34 @@ PyMODINIT_FUNC PyInit_choleskies_cython(void) goto __pyx_L0; __pyx_L1_error:; __Pyx_XDECREF(__pyx_t_1); - __Pyx_XDECREF(__pyx_t_2); if (__pyx_m) { if (__pyx_d) { __Pyx_AddTraceback("init GPy.util.choleskies_cython", __pyx_clineno, __pyx_lineno, __pyx_filename); - Py_DECREF(__pyx_d); __pyx_d = 0; } - Py_DECREF(__pyx_m); __pyx_m = 0; + Py_CLEAR(__pyx_m); } else if (!PyErr_Occurred()) { PyErr_SetString(PyExc_ImportError, "init GPy.util.choleskies_cython"); } __pyx_L0:; __Pyx_RefNannyFinishContext(); - #if PY_MAJOR_VERSION < 3 - return; - #else + #if CYTHON_PEP489_MULTI_PHASE_INIT + return (__pyx_m != NULL) ? 0 : -1; + #elif PY_MAJOR_VERSION >= 3 return __pyx_m; + #else + return; #endif } -/* Runtime support code */ +/* --- Runtime support code --- */ +/* Refnanny */ #if CYTHON_REFNANNY static __Pyx_RefNannyAPIStruct *__Pyx_RefNannyImportAPI(const char *modname) { PyObject *m = NULL, *p = NULL; void *r = NULL; - m = PyImport_ImportModule((char *)modname); + m = PyImport_ImportModule(modname); if (!m) goto end; - p = PyObject_GetAttrString(m, (char *)"RefNannyAPI"); + p = PyObject_GetAttrString(m, "RefNannyAPI"); if (!p) goto end; r = PyLong_AsVoidPtr(p); end: @@ -18012,6 +21654,21 @@ end: } #endif +/* PyObjectGetAttrStr */ +#if CYTHON_USE_TYPE_SLOTS +static CYTHON_INLINE PyObject* __Pyx_PyObject_GetAttrStr(PyObject* obj, PyObject* attr_name) { + PyTypeObject* tp = Py_TYPE(obj); + if (likely(tp->tp_getattro)) + return tp->tp_getattro(obj, attr_name); +#if PY_MAJOR_VERSION < 3 + if (likely(tp->tp_getattr)) + return tp->tp_getattr(obj, PyString_AS_STRING(attr_name)); +#endif + return PyObject_GetAttr(obj, attr_name); +} +#endif + +/* GetBuiltinName */ static PyObject *__Pyx_GetBuiltinName(PyObject *name) { PyObject* result = __Pyx_PyObject_GetAttrStr(__pyx_b, name); if (unlikely(!result)) { @@ -18025,6 +21682,7 @@ static PyObject *__Pyx_GetBuiltinName(PyObject *name) { return result; } +/* RaiseArgTupleInvalid */ static void __Pyx_RaiseArgtupleInvalid( const char* func_name, int exact, @@ -18050,6 +21708,7 @@ static void __Pyx_RaiseArgtupleInvalid( (num_expected == 1) ? "" : "s", num_found); } +/* RaiseDoubleKeywords */ static void __Pyx_RaiseDoubleKeywordsError( const char* func_name, PyObject* kw_name) @@ -18063,6 +21722,7 @@ static void __Pyx_RaiseDoubleKeywordsError( #endif } +/* ParseKeywords */ static int __Pyx_ParseOptionalKeywords( PyObject *kwds, PyObject **argnames[], @@ -18164,23 +21824,184 @@ bad: return -1; } -static CYTHON_INLINE PyObject *__Pyx_GetModuleGlobalName(PyObject *name) { +/* GetModuleGlobalName */ +#if CYTHON_USE_DICT_VERSIONS +static PyObject *__Pyx__GetModuleGlobalName(PyObject *name, PY_UINT64_T *dict_version, PyObject **dict_cached_value) +#else +static CYTHON_INLINE PyObject *__Pyx__GetModuleGlobalName(PyObject *name) +#endif +{ PyObject *result; -#if CYTHON_COMPILING_IN_CPYTHON - result = PyDict_GetItem(__pyx_d, name); +#if !CYTHON_AVOID_BORROWED_REFS +#if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX >= 0x030500A1 + result = _PyDict_GetItem_KnownHash(__pyx_d, name, ((PyASCIIObject *) name)->hash); + __PYX_UPDATE_DICT_CACHE(__pyx_d, result, *dict_cached_value, *dict_version) if (likely(result)) { - Py_INCREF(result); - } else { + return __Pyx_NewRef(result); + } else if (unlikely(PyErr_Occurred())) { + return NULL; + } +#else + result = PyDict_GetItem(__pyx_d, name); + __PYX_UPDATE_DICT_CACHE(__pyx_d, result, *dict_cached_value, *dict_version) + if (likely(result)) { + return __Pyx_NewRef(result); + } +#endif #else result = PyObject_GetItem(__pyx_d, name); - if (!result) { - PyErr_Clear(); -#endif - result = __Pyx_GetBuiltinName(name); + __PYX_UPDATE_DICT_CACHE(__pyx_d, result, *dict_cached_value, *dict_version) + if (likely(result)) { + return __Pyx_NewRef(result); } - return result; + PyErr_Clear(); +#endif + return __Pyx_GetBuiltinName(name); } +/* PyCFunctionFastCall */ +#if CYTHON_FAST_PYCCALL +static CYTHON_INLINE PyObject * __Pyx_PyCFunction_FastCall(PyObject *func_obj, PyObject **args, Py_ssize_t nargs) { + PyCFunctionObject *func = (PyCFunctionObject*)func_obj; + PyCFunction meth = PyCFunction_GET_FUNCTION(func); + PyObject *self = PyCFunction_GET_SELF(func); + int flags = PyCFunction_GET_FLAGS(func); + assert(PyCFunction_Check(func)); + assert(METH_FASTCALL == (flags & ~(METH_CLASS | METH_STATIC | METH_COEXIST | METH_KEYWORDS | METH_STACKLESS))); + assert(nargs >= 0); + assert(nargs == 0 || args != NULL); + /* _PyCFunction_FastCallDict() must not be called with an exception set, + because it may clear it (directly or indirectly) and so the + caller loses its exception */ + assert(!PyErr_Occurred()); + if ((PY_VERSION_HEX < 0x030700A0) || unlikely(flags & METH_KEYWORDS)) { + return (*((__Pyx_PyCFunctionFastWithKeywords)(void*)meth)) (self, args, nargs, NULL); + } else { + return (*((__Pyx_PyCFunctionFast)(void*)meth)) (self, args, nargs); + } +} +#endif + +/* PyFunctionFastCall */ +#if CYTHON_FAST_PYCALL +static PyObject* __Pyx_PyFunction_FastCallNoKw(PyCodeObject *co, PyObject **args, Py_ssize_t na, + PyObject *globals) { + PyFrameObject *f; + PyThreadState *tstate = __Pyx_PyThreadState_Current; + PyObject **fastlocals; + Py_ssize_t i; + PyObject *result; + assert(globals != NULL); + /* XXX Perhaps we should create a specialized + PyFrame_New() that doesn't take locals, but does + take builtins without sanity checking them. + */ + assert(tstate != NULL); + f = PyFrame_New(tstate, co, globals, NULL); + if (f == NULL) { + return NULL; + } + fastlocals = __Pyx_PyFrame_GetLocalsplus(f); + for (i = 0; i < na; i++) { + Py_INCREF(*args); + fastlocals[i] = *args++; + } + result = PyEval_EvalFrameEx(f,0); + ++tstate->recursion_depth; + Py_DECREF(f); + --tstate->recursion_depth; + return result; +} +#if 1 || PY_VERSION_HEX < 0x030600B1 +static PyObject *__Pyx_PyFunction_FastCallDict(PyObject *func, PyObject **args, int nargs, PyObject *kwargs) { + PyCodeObject *co = (PyCodeObject *)PyFunction_GET_CODE(func); + PyObject *globals = PyFunction_GET_GLOBALS(func); + PyObject *argdefs = PyFunction_GET_DEFAULTS(func); + PyObject *closure; +#if PY_MAJOR_VERSION >= 3 + PyObject *kwdefs; +#endif + PyObject *kwtuple, **k; + PyObject **d; + Py_ssize_t nd; + Py_ssize_t nk; + PyObject *result; + assert(kwargs == NULL || PyDict_Check(kwargs)); + nk = kwargs ? PyDict_Size(kwargs) : 0; + if (Py_EnterRecursiveCall((char*)" while calling a Python object")) { + return NULL; + } + if ( +#if PY_MAJOR_VERSION >= 3 + co->co_kwonlyargcount == 0 && +#endif + likely(kwargs == NULL || nk == 0) && + co->co_flags == (CO_OPTIMIZED | CO_NEWLOCALS | CO_NOFREE)) { + if (argdefs == NULL && co->co_argcount == nargs) { + result = __Pyx_PyFunction_FastCallNoKw(co, args, nargs, globals); + goto done; + } + else if (nargs == 0 && argdefs != NULL + && co->co_argcount == Py_SIZE(argdefs)) { + /* function called with no arguments, but all parameters have + a default value: use default values as arguments .*/ + args = &PyTuple_GET_ITEM(argdefs, 0); + result =__Pyx_PyFunction_FastCallNoKw(co, args, Py_SIZE(argdefs), globals); + goto done; + } + } + if (kwargs != NULL) { + Py_ssize_t pos, i; + kwtuple = PyTuple_New(2 * nk); + if (kwtuple == NULL) { + result = NULL; + goto done; + } + k = &PyTuple_GET_ITEM(kwtuple, 0); + pos = i = 0; + while (PyDict_Next(kwargs, &pos, &k[i], &k[i+1])) { + Py_INCREF(k[i]); + Py_INCREF(k[i+1]); + i += 2; + } + nk = i / 2; + } + else { + kwtuple = NULL; + k = NULL; + } + closure = PyFunction_GET_CLOSURE(func); +#if PY_MAJOR_VERSION >= 3 + kwdefs = PyFunction_GET_KW_DEFAULTS(func); +#endif + if (argdefs != NULL) { + d = &PyTuple_GET_ITEM(argdefs, 0); + nd = Py_SIZE(argdefs); + } + else { + d = NULL; + nd = 0; + } +#if PY_MAJOR_VERSION >= 3 + result = PyEval_EvalCodeEx((PyObject*)co, globals, (PyObject *)NULL, + args, nargs, + k, (int)nk, + d, (int)nd, kwdefs, closure); +#else + result = PyEval_EvalCodeEx(co, globals, (PyObject *)NULL, + args, nargs, + k, (int)nk, + d, (int)nd, closure); +#endif + Py_XDECREF(kwtuple); +done: + Py_LeaveRecursiveCall(); + return result; +} +#endif +#endif + +/* PyObjectCall */ #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyObject_Call(PyObject *func, PyObject *arg, PyObject *kw) { PyObject *result; @@ -18200,6 +22021,36 @@ static CYTHON_INLINE PyObject* __Pyx_PyObject_Call(PyObject *func, PyObject *arg } #endif +/* PyObjectCall2Args */ +static CYTHON_UNUSED PyObject* __Pyx_PyObject_Call2Args(PyObject* function, PyObject* arg1, PyObject* arg2) { + PyObject *args, *result = NULL; + #if CYTHON_FAST_PYCALL + if (PyFunction_Check(function)) { + PyObject *args[2] = {arg1, arg2}; + return __Pyx_PyFunction_FastCall(function, args, 2); + } + #endif + #if CYTHON_FAST_PYCCALL + if (__Pyx_PyFastCFunction_Check(function)) { + PyObject *args[2] = {arg1, arg2}; + return __Pyx_PyCFunction_FastCall(function, args, 2); + } + #endif + args = PyTuple_New(2); + if (unlikely(!args)) goto done; + Py_INCREF(arg1); + PyTuple_SET_ITEM(args, 0, arg1); + Py_INCREF(arg2); + PyTuple_SET_ITEM(args, 1, arg2); + Py_INCREF(function); + result = __Pyx_PyObject_Call(function, args, NULL); + Py_DECREF(args); + Py_DECREF(function); +done: + return result; +} + +/* PyObjectCallMethO */ #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyObject_CallMethO(PyObject *func, PyObject *arg) { PyObject *self, *result; @@ -18219,6 +22070,7 @@ static CYTHON_INLINE PyObject* __Pyx_PyObject_CallMethO(PyObject *func, PyObject } #endif +/* PyObjectCallOneArg */ #if CYTHON_COMPILING_IN_CPYTHON static PyObject* __Pyx__PyObject_CallOneArg(PyObject *func, PyObject *arg) { PyObject *result; @@ -18231,28 +22083,1847 @@ static PyObject* __Pyx__PyObject_CallOneArg(PyObject *func, PyObject *arg) { return result; } static CYTHON_INLINE PyObject* __Pyx_PyObject_CallOneArg(PyObject *func, PyObject *arg) { -#ifdef __Pyx_CyFunction_USED - if (likely(PyCFunction_Check(func) || PyObject_TypeCheck(func, __pyx_CyFunctionType))) { -#else - if (likely(PyCFunction_Check(func))) { +#if CYTHON_FAST_PYCALL + if (PyFunction_Check(func)) { + return __Pyx_PyFunction_FastCall(func, &arg, 1); + } #endif + if (likely(PyCFunction_Check(func))) { if (likely(PyCFunction_GET_FLAGS(func) & METH_O)) { return __Pyx_PyObject_CallMethO(func, arg); +#if CYTHON_FAST_PYCCALL + } else if (PyCFunction_GET_FLAGS(func) & METH_FASTCALL) { + return __Pyx_PyCFunction_FastCall(func, &arg, 1); +#endif } } return __Pyx__PyObject_CallOneArg(func, arg); } #else static CYTHON_INLINE PyObject* __Pyx_PyObject_CallOneArg(PyObject *func, PyObject *arg) { - PyObject* args = PyTuple_Pack(1, arg); - return (likely(args)) ? __Pyx_PyObject_Call(func, args, NULL) : NULL; + PyObject *result; + PyObject *args = PyTuple_Pack(1, arg); + if (unlikely(!args)) return NULL; + result = __Pyx_PyObject_Call(func, args, NULL); + Py_DECREF(args); + return result; } #endif -static CYTHON_INLINE int __Pyx_IsLittleEndian(void) { - unsigned int n = 1; - return *(unsigned char*)(&n) != 0; +/* MemviewSliceInit */ +static int +__Pyx_init_memviewslice(struct __pyx_memoryview_obj *memview, + int ndim, + __Pyx_memviewslice *memviewslice, + int memview_is_new_reference) +{ + __Pyx_RefNannyDeclarations + int i, retval=-1; + Py_buffer *buf = &memview->view; + __Pyx_RefNannySetupContext("init_memviewslice", 0); + if (!buf) { + PyErr_SetString(PyExc_ValueError, + "buf is NULL."); + goto fail; + } else if (memviewslice->memview || memviewslice->data) { + PyErr_SetString(PyExc_ValueError, + "memviewslice is already initialized!"); + goto fail; + } + if (buf->strides) { + for (i = 0; i < ndim; i++) { + memviewslice->strides[i] = buf->strides[i]; + } + } else { + Py_ssize_t stride = buf->itemsize; + for (i = ndim - 1; i >= 0; i--) { + memviewslice->strides[i] = stride; + stride *= buf->shape[i]; + } + } + for (i = 0; i < ndim; i++) { + memviewslice->shape[i] = buf->shape[i]; + if (buf->suboffsets) { + memviewslice->suboffsets[i] = buf->suboffsets[i]; + } else { + memviewslice->suboffsets[i] = -1; + } + } + memviewslice->memview = memview; + memviewslice->data = (char *)buf->buf; + if (__pyx_add_acquisition_count(memview) == 0 && !memview_is_new_reference) { + Py_INCREF(memview); + } + retval = 0; + goto no_fail; +fail: + memviewslice->memview = 0; + memviewslice->data = 0; + retval = -1; +no_fail: + __Pyx_RefNannyFinishContext(); + return retval; } +#ifndef Py_NO_RETURN +#define Py_NO_RETURN +#endif +static void __pyx_fatalerror(const char *fmt, ...) Py_NO_RETURN { + va_list vargs; + char msg[200]; +#ifdef HAVE_STDARG_PROTOTYPES + va_start(vargs, fmt); +#else + va_start(vargs); +#endif + vsnprintf(msg, 200, fmt, vargs); + va_end(vargs); + Py_FatalError(msg); +} +static CYTHON_INLINE int +__pyx_add_acquisition_count_locked(__pyx_atomic_int *acquisition_count, + PyThread_type_lock lock) +{ + int result; + PyThread_acquire_lock(lock, 1); + result = (*acquisition_count)++; + PyThread_release_lock(lock); + return result; +} +static CYTHON_INLINE int +__pyx_sub_acquisition_count_locked(__pyx_atomic_int *acquisition_count, + PyThread_type_lock lock) +{ + int result; + PyThread_acquire_lock(lock, 1); + result = (*acquisition_count)--; + PyThread_release_lock(lock); + return result; +} +static CYTHON_INLINE void +__Pyx_INC_MEMVIEW(__Pyx_memviewslice *memslice, int have_gil, int lineno) +{ + int first_time; + struct __pyx_memoryview_obj *memview = memslice->memview; + if (!memview || (PyObject *) memview == Py_None) + return; + if (__pyx_get_slice_count(memview) < 0) + __pyx_fatalerror("Acquisition count is %d (line %d)", + __pyx_get_slice_count(memview), lineno); + first_time = __pyx_add_acquisition_count(memview) == 0; + if (first_time) { + if (have_gil) { + Py_INCREF((PyObject *) memview); + } else { + PyGILState_STATE _gilstate = PyGILState_Ensure(); + Py_INCREF((PyObject *) memview); + PyGILState_Release(_gilstate); + } + } +} +static CYTHON_INLINE void __Pyx_XDEC_MEMVIEW(__Pyx_memviewslice *memslice, + int have_gil, int lineno) { + int last_time; + struct __pyx_memoryview_obj *memview = memslice->memview; + if (!memview ) { + return; + } else if ((PyObject *) memview == Py_None) { + memslice->memview = NULL; + return; + } + if (__pyx_get_slice_count(memview) <= 0) + __pyx_fatalerror("Acquisition count is %d (line %d)", + __pyx_get_slice_count(memview), lineno); + last_time = __pyx_sub_acquisition_count(memview) == 1; + memslice->data = NULL; + if (last_time) { + if (have_gil) { + Py_CLEAR(memslice->memview); + } else { + PyGILState_STATE _gilstate = PyGILState_Ensure(); + Py_CLEAR(memslice->memview); + PyGILState_Release(_gilstate); + } + } else { + memslice->memview = NULL; + } +} + +/* None */ +static CYTHON_INLINE long __Pyx_div_long(long a, long b) { + long q = a / b; + long r = a - q*b; + q -= ((r != 0) & ((r ^ b) < 0)); + return q; +} + +/* PyErrFetchRestore */ +#if CYTHON_FAST_THREAD_STATE +static CYTHON_INLINE void __Pyx_ErrRestoreInState(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb) { + PyObject *tmp_type, *tmp_value, *tmp_tb; + tmp_type = tstate->curexc_type; + tmp_value = tstate->curexc_value; + tmp_tb = tstate->curexc_traceback; + tstate->curexc_type = type; + tstate->curexc_value = value; + tstate->curexc_traceback = tb; + Py_XDECREF(tmp_type); + Py_XDECREF(tmp_value); + Py_XDECREF(tmp_tb); +} +static CYTHON_INLINE void __Pyx_ErrFetchInState(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb) { + *type = tstate->curexc_type; + *value = tstate->curexc_value; + *tb = tstate->curexc_traceback; + tstate->curexc_type = 0; + tstate->curexc_value = 0; + tstate->curexc_traceback = 0; +} +#endif + +/* WriteUnraisableException */ +static void __Pyx_WriteUnraisable(const char *name, CYTHON_UNUSED int clineno, + CYTHON_UNUSED int lineno, CYTHON_UNUSED const char *filename, + int full_traceback, CYTHON_UNUSED int nogil) { + PyObject *old_exc, *old_val, *old_tb; + PyObject *ctx; + __Pyx_PyThreadState_declare +#ifdef WITH_THREAD + PyGILState_STATE state; + if (nogil) + state = PyGILState_Ensure(); +#ifdef _MSC_VER + else state = (PyGILState_STATE)-1; +#endif +#endif + __Pyx_PyThreadState_assign + __Pyx_ErrFetch(&old_exc, &old_val, &old_tb); + if (full_traceback) { + Py_XINCREF(old_exc); + Py_XINCREF(old_val); + Py_XINCREF(old_tb); + __Pyx_ErrRestore(old_exc, old_val, old_tb); + PyErr_PrintEx(1); + } + #if PY_MAJOR_VERSION < 3 + ctx = PyString_FromString(name); + #else + ctx = PyUnicode_FromString(name); + #endif + __Pyx_ErrRestore(old_exc, old_val, old_tb); + if (!ctx) { + PyErr_WriteUnraisable(Py_None); + } else { + PyErr_WriteUnraisable(ctx); + Py_DECREF(ctx); + } +#ifdef WITH_THREAD + if (nogil) + PyGILState_Release(state); +#endif +} + +/* RaiseException */ +#if PY_MAJOR_VERSION < 3 +static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, + CYTHON_UNUSED PyObject *cause) { + __Pyx_PyThreadState_declare + Py_XINCREF(type); + if (!value || value == Py_None) + value = NULL; + else + Py_INCREF(value); + if (!tb || tb == Py_None) + tb = NULL; + else { + Py_INCREF(tb); + if (!PyTraceBack_Check(tb)) { + PyErr_SetString(PyExc_TypeError, + "raise: arg 3 must be a traceback or None"); + goto raise_error; + } + } + if (PyType_Check(type)) { +#if CYTHON_COMPILING_IN_PYPY + if (!value) { + Py_INCREF(Py_None); + value = Py_None; + } +#endif + PyErr_NormalizeException(&type, &value, &tb); + } else { + if (value) { + PyErr_SetString(PyExc_TypeError, + "instance exception may not have a separate value"); + goto raise_error; + } + value = type; + type = (PyObject*) Py_TYPE(type); + Py_INCREF(type); + if (!PyType_IsSubtype((PyTypeObject *)type, (PyTypeObject *)PyExc_BaseException)) { + PyErr_SetString(PyExc_TypeError, + "raise: exception class must be a subclass of BaseException"); + goto raise_error; + } + } + __Pyx_PyThreadState_assign + __Pyx_ErrRestore(type, value, tb); + return; +raise_error: + Py_XDECREF(value); + Py_XDECREF(type); + Py_XDECREF(tb); + return; +} +#else +static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause) { + PyObject* owned_instance = NULL; + if (tb == Py_None) { + tb = 0; + } else if (tb && !PyTraceBack_Check(tb)) { + PyErr_SetString(PyExc_TypeError, + "raise: arg 3 must be a traceback or None"); + goto bad; + } + if (value == Py_None) + value = 0; + if (PyExceptionInstance_Check(type)) { + if (value) { + PyErr_SetString(PyExc_TypeError, + "instance exception may not have a separate value"); + goto bad; + } + value = type; + type = (PyObject*) Py_TYPE(value); + } else if (PyExceptionClass_Check(type)) { + PyObject *instance_class = NULL; + if (value && PyExceptionInstance_Check(value)) { + instance_class = (PyObject*) Py_TYPE(value); + if (instance_class != type) { + int is_subclass = PyObject_IsSubclass(instance_class, type); + if (!is_subclass) { + instance_class = NULL; + } else if (unlikely(is_subclass == -1)) { + goto bad; + } else { + type = instance_class; + } + } + } + if (!instance_class) { + PyObject *args; + if (!value) + args = PyTuple_New(0); + else if (PyTuple_Check(value)) { + Py_INCREF(value); + args = value; + } else + args = PyTuple_Pack(1, value); + if (!args) + goto bad; + owned_instance = PyObject_Call(type, args, NULL); + Py_DECREF(args); + if (!owned_instance) + goto bad; + value = owned_instance; + if (!PyExceptionInstance_Check(value)) { + PyErr_Format(PyExc_TypeError, + "calling %R should have returned an instance of " + "BaseException, not %R", + type, Py_TYPE(value)); + goto bad; + } + } + } else { + PyErr_SetString(PyExc_TypeError, + "raise: exception class must be a subclass of BaseException"); + goto bad; + } + if (cause) { + PyObject *fixed_cause; + if (cause == Py_None) { + fixed_cause = NULL; + } else if (PyExceptionClass_Check(cause)) { + fixed_cause = PyObject_CallObject(cause, NULL); + if (fixed_cause == NULL) + goto bad; + } else if (PyExceptionInstance_Check(cause)) { + fixed_cause = cause; + Py_INCREF(fixed_cause); + } else { + PyErr_SetString(PyExc_TypeError, + "exception causes must derive from " + "BaseException"); + goto bad; + } + PyException_SetCause(value, fixed_cause); + } + PyErr_SetObject(type, value); + if (tb) { +#if CYTHON_COMPILING_IN_PYPY + PyObject *tmp_type, *tmp_value, *tmp_tb; + PyErr_Fetch(&tmp_type, &tmp_value, &tmp_tb); + Py_INCREF(tb); + PyErr_Restore(tmp_type, tmp_value, tb); + Py_XDECREF(tmp_tb); +#else + PyThreadState *tstate = __Pyx_PyThreadState_Current; + PyObject* tmp_tb = tstate->curexc_traceback; + if (tb != tmp_tb) { + Py_INCREF(tb); + tstate->curexc_traceback = tb; + Py_XDECREF(tmp_tb); + } +#endif + } +bad: + Py_XDECREF(owned_instance); + return; +} +#endif + +/* DictGetItem */ +#if PY_MAJOR_VERSION >= 3 && !CYTHON_COMPILING_IN_PYPY +static PyObject *__Pyx_PyDict_GetItem(PyObject *d, PyObject* key) { + PyObject *value; + value = PyDict_GetItemWithError(d, key); + if (unlikely(!value)) { + if (!PyErr_Occurred()) { + if (unlikely(PyTuple_Check(key))) { + PyObject* args = PyTuple_Pack(1, key); + if (likely(args)) { + PyErr_SetObject(PyExc_KeyError, args); + Py_DECREF(args); + } + } else { + PyErr_SetObject(PyExc_KeyError, key); + } + } + return NULL; + } + Py_INCREF(value); + return value; +} +#endif + +/* RaiseTooManyValuesToUnpack */ +static CYTHON_INLINE void __Pyx_RaiseTooManyValuesError(Py_ssize_t expected) { + PyErr_Format(PyExc_ValueError, + "too many values to unpack (expected %" CYTHON_FORMAT_SSIZE_T "d)", expected); +} + +/* RaiseNeedMoreValuesToUnpack */ +static CYTHON_INLINE void __Pyx_RaiseNeedMoreValuesError(Py_ssize_t index) { + PyErr_Format(PyExc_ValueError, + "need more than %" CYTHON_FORMAT_SSIZE_T "d value%.1s to unpack", + index, (index == 1) ? "" : "s"); +} + +/* RaiseNoneIterError */ +static CYTHON_INLINE void __Pyx_RaiseNoneNotIterableError(void) { + PyErr_SetString(PyExc_TypeError, "'NoneType' object is not iterable"); +} + +/* ExtTypeTest */ +static CYTHON_INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type) { + if (unlikely(!type)) { + PyErr_SetString(PyExc_SystemError, "Missing type object"); + return 0; + } + if (likely(__Pyx_TypeCheck(obj, type))) + return 1; + PyErr_Format(PyExc_TypeError, "Cannot convert %.200s to %.200s", + Py_TYPE(obj)->tp_name, type->tp_name); + return 0; +} + +/* GetTopmostException */ +#if CYTHON_USE_EXC_INFO_STACK +static _PyErr_StackItem * +__Pyx_PyErr_GetTopmostException(PyThreadState *tstate) +{ + _PyErr_StackItem *exc_info = tstate->exc_info; + while ((exc_info->exc_type == NULL || exc_info->exc_type == Py_None) && + exc_info->previous_item != NULL) + { + exc_info = exc_info->previous_item; + } + return exc_info; +} +#endif + +/* SaveResetException */ +#if CYTHON_FAST_THREAD_STATE +static CYTHON_INLINE void __Pyx__ExceptionSave(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb) { + #if CYTHON_USE_EXC_INFO_STACK + _PyErr_StackItem *exc_info = __Pyx_PyErr_GetTopmostException(tstate); + *type = exc_info->exc_type; + *value = exc_info->exc_value; + *tb = exc_info->exc_traceback; + #else + *type = tstate->exc_type; + *value = tstate->exc_value; + *tb = tstate->exc_traceback; + #endif + Py_XINCREF(*type); + Py_XINCREF(*value); + Py_XINCREF(*tb); +} +static CYTHON_INLINE void __Pyx__ExceptionReset(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb) { + PyObject *tmp_type, *tmp_value, *tmp_tb; + #if CYTHON_USE_EXC_INFO_STACK + _PyErr_StackItem *exc_info = tstate->exc_info; + tmp_type = exc_info->exc_type; + tmp_value = exc_info->exc_value; + tmp_tb = exc_info->exc_traceback; + exc_info->exc_type = type; + exc_info->exc_value = value; + exc_info->exc_traceback = tb; + #else + tmp_type = tstate->exc_type; + tmp_value = tstate->exc_value; + tmp_tb = tstate->exc_traceback; + tstate->exc_type = type; + tstate->exc_value = value; + tstate->exc_traceback = tb; + #endif + Py_XDECREF(tmp_type); + Py_XDECREF(tmp_value); + Py_XDECREF(tmp_tb); +} +#endif + +/* PyErrExceptionMatches */ +#if CYTHON_FAST_THREAD_STATE +static int __Pyx_PyErr_ExceptionMatchesTuple(PyObject *exc_type, PyObject *tuple) { + Py_ssize_t i, n; + n = PyTuple_GET_SIZE(tuple); +#if PY_MAJOR_VERSION >= 3 + for (i=0; icurexc_type; + if (exc_type == err) return 1; + if (unlikely(!exc_type)) return 0; + if (unlikely(PyTuple_Check(err))) + return __Pyx_PyErr_ExceptionMatchesTuple(exc_type, err); + return __Pyx_PyErr_GivenExceptionMatches(exc_type, err); +} +#endif + +/* GetException */ +#if CYTHON_FAST_THREAD_STATE +static int __Pyx__GetException(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb) +#else +static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb) +#endif +{ + PyObject *local_type, *local_value, *local_tb; +#if CYTHON_FAST_THREAD_STATE + PyObject *tmp_type, *tmp_value, *tmp_tb; + local_type = tstate->curexc_type; + local_value = tstate->curexc_value; + local_tb = tstate->curexc_traceback; + tstate->curexc_type = 0; + tstate->curexc_value = 0; + tstate->curexc_traceback = 0; +#else + PyErr_Fetch(&local_type, &local_value, &local_tb); +#endif + PyErr_NormalizeException(&local_type, &local_value, &local_tb); +#if CYTHON_FAST_THREAD_STATE + if (unlikely(tstate->curexc_type)) +#else + if (unlikely(PyErr_Occurred())) +#endif + goto bad; + #if PY_MAJOR_VERSION >= 3 + if (local_tb) { + if (unlikely(PyException_SetTraceback(local_value, local_tb) < 0)) + goto bad; + } + #endif + Py_XINCREF(local_tb); + Py_XINCREF(local_type); + Py_XINCREF(local_value); + *type = local_type; + *value = local_value; + *tb = local_tb; +#if CYTHON_FAST_THREAD_STATE + #if CYTHON_USE_EXC_INFO_STACK + { + _PyErr_StackItem *exc_info = tstate->exc_info; + tmp_type = exc_info->exc_type; + tmp_value = exc_info->exc_value; + tmp_tb = exc_info->exc_traceback; + exc_info->exc_type = local_type; + exc_info->exc_value = local_value; + exc_info->exc_traceback = local_tb; + } + #else + tmp_type = tstate->exc_type; + tmp_value = tstate->exc_value; + tmp_tb = tstate->exc_traceback; + tstate->exc_type = local_type; + tstate->exc_value = local_value; + tstate->exc_traceback = local_tb; + #endif + Py_XDECREF(tmp_type); + Py_XDECREF(tmp_value); + Py_XDECREF(tmp_tb); +#else + PyErr_SetExcInfo(local_type, local_value, local_tb); +#endif + return 0; +bad: + *type = 0; + *value = 0; + *tb = 0; + Py_XDECREF(local_type); + Py_XDECREF(local_value); + Py_XDECREF(local_tb); + return -1; +} + +/* ArgTypeTest */ +static int __Pyx__ArgTypeTest(PyObject *obj, PyTypeObject *type, const char *name, int exact) +{ + if (unlikely(!type)) { + PyErr_SetString(PyExc_SystemError, "Missing type object"); + return 0; + } + else if (exact) { + #if PY_MAJOR_VERSION == 2 + if ((type == &PyBaseString_Type) && likely(__Pyx_PyBaseString_CheckExact(obj))) return 1; + #endif + } + else { + if (likely(__Pyx_TypeCheck(obj, type))) return 1; + } + PyErr_Format(PyExc_TypeError, + "Argument '%.200s' has incorrect type (expected %.200s, got %.200s)", + name, type->tp_name, Py_TYPE(obj)->tp_name); + return 0; +} + +/* BytesEquals */ +static CYTHON_INLINE int __Pyx_PyBytes_Equals(PyObject* s1, PyObject* s2, int equals) { +#if CYTHON_COMPILING_IN_PYPY + return PyObject_RichCompareBool(s1, s2, equals); +#else + if (s1 == s2) { + return (equals == Py_EQ); + } else if (PyBytes_CheckExact(s1) & PyBytes_CheckExact(s2)) { + const char *ps1, *ps2; + Py_ssize_t length = PyBytes_GET_SIZE(s1); + if (length != PyBytes_GET_SIZE(s2)) + return (equals == Py_NE); + ps1 = PyBytes_AS_STRING(s1); + ps2 = PyBytes_AS_STRING(s2); + if (ps1[0] != ps2[0]) { + return (equals == Py_NE); + } else if (length == 1) { + return (equals == Py_EQ); + } else { + int result; +#if CYTHON_USE_UNICODE_INTERNALS + Py_hash_t hash1, hash2; + hash1 = ((PyBytesObject*)s1)->ob_shash; + hash2 = ((PyBytesObject*)s2)->ob_shash; + if (hash1 != hash2 && hash1 != -1 && hash2 != -1) { + return (equals == Py_NE); + } +#endif + result = memcmp(ps1, ps2, (size_t)length); + return (equals == Py_EQ) ? (result == 0) : (result != 0); + } + } else if ((s1 == Py_None) & PyBytes_CheckExact(s2)) { + return (equals == Py_NE); + } else if ((s2 == Py_None) & PyBytes_CheckExact(s1)) { + return (equals == Py_NE); + } else { + int result; + PyObject* py_result = PyObject_RichCompare(s1, s2, equals); + if (!py_result) + return -1; + result = __Pyx_PyObject_IsTrue(py_result); + Py_DECREF(py_result); + return result; + } +#endif +} + +/* UnicodeEquals */ +static CYTHON_INLINE int __Pyx_PyUnicode_Equals(PyObject* s1, PyObject* s2, int equals) { +#if CYTHON_COMPILING_IN_PYPY + return PyObject_RichCompareBool(s1, s2, equals); +#else +#if PY_MAJOR_VERSION < 3 + PyObject* owned_ref = NULL; +#endif + int s1_is_unicode, s2_is_unicode; + if (s1 == s2) { + goto return_eq; + } + s1_is_unicode = PyUnicode_CheckExact(s1); + s2_is_unicode = PyUnicode_CheckExact(s2); +#if PY_MAJOR_VERSION < 3 + if ((s1_is_unicode & (!s2_is_unicode)) && PyString_CheckExact(s2)) { + owned_ref = PyUnicode_FromObject(s2); + if (unlikely(!owned_ref)) + return -1; + s2 = owned_ref; + s2_is_unicode = 1; + } else if ((s2_is_unicode & (!s1_is_unicode)) && PyString_CheckExact(s1)) { + owned_ref = PyUnicode_FromObject(s1); + if (unlikely(!owned_ref)) + return -1; + s1 = owned_ref; + s1_is_unicode = 1; + } else if (((!s2_is_unicode) & (!s1_is_unicode))) { + return __Pyx_PyBytes_Equals(s1, s2, equals); + } +#endif + if (s1_is_unicode & s2_is_unicode) { + Py_ssize_t length; + int kind; + void *data1, *data2; + if (unlikely(__Pyx_PyUnicode_READY(s1) < 0) || unlikely(__Pyx_PyUnicode_READY(s2) < 0)) + return -1; + length = __Pyx_PyUnicode_GET_LENGTH(s1); + if (length != __Pyx_PyUnicode_GET_LENGTH(s2)) { + goto return_ne; + } +#if CYTHON_USE_UNICODE_INTERNALS + { + Py_hash_t hash1, hash2; + #if CYTHON_PEP393_ENABLED + hash1 = ((PyASCIIObject*)s1)->hash; + hash2 = ((PyASCIIObject*)s2)->hash; + #else + hash1 = ((PyUnicodeObject*)s1)->hash; + hash2 = ((PyUnicodeObject*)s2)->hash; + #endif + if (hash1 != hash2 && hash1 != -1 && hash2 != -1) { + goto return_ne; + } + } +#endif + kind = __Pyx_PyUnicode_KIND(s1); + if (kind != __Pyx_PyUnicode_KIND(s2)) { + goto return_ne; + } + data1 = __Pyx_PyUnicode_DATA(s1); + data2 = __Pyx_PyUnicode_DATA(s2); + if (__Pyx_PyUnicode_READ(kind, data1, 0) != __Pyx_PyUnicode_READ(kind, data2, 0)) { + goto return_ne; + } else if (length == 1) { + goto return_eq; + } else { + int result = memcmp(data1, data2, (size_t)(length * kind)); + #if PY_MAJOR_VERSION < 3 + Py_XDECREF(owned_ref); + #endif + return (equals == Py_EQ) ? (result == 0) : (result != 0); + } + } else if ((s1 == Py_None) & s2_is_unicode) { + goto return_ne; + } else if ((s2 == Py_None) & s1_is_unicode) { + goto return_ne; + } else { + int result; + PyObject* py_result = PyObject_RichCompare(s1, s2, equals); + #if PY_MAJOR_VERSION < 3 + Py_XDECREF(owned_ref); + #endif + if (!py_result) + return -1; + result = __Pyx_PyObject_IsTrue(py_result); + Py_DECREF(py_result); + return result; + } +return_eq: + #if PY_MAJOR_VERSION < 3 + Py_XDECREF(owned_ref); + #endif + return (equals == Py_EQ); +return_ne: + #if PY_MAJOR_VERSION < 3 + Py_XDECREF(owned_ref); + #endif + return (equals == Py_NE); +#endif +} + +/* None */ +static CYTHON_INLINE Py_ssize_t __Pyx_div_Py_ssize_t(Py_ssize_t a, Py_ssize_t b) { + Py_ssize_t q = a / b; + Py_ssize_t r = a - q*b; + q -= ((r != 0) & ((r ^ b) < 0)); + return q; +} + +/* GetAttr */ +static CYTHON_INLINE PyObject *__Pyx_GetAttr(PyObject *o, PyObject *n) { +#if CYTHON_USE_TYPE_SLOTS +#if PY_MAJOR_VERSION >= 3 + if (likely(PyUnicode_Check(n))) +#else + if (likely(PyString_Check(n))) +#endif + return __Pyx_PyObject_GetAttrStr(o, n); +#endif + return PyObject_GetAttr(o, n); +} + +/* GetItemInt */ +static PyObject *__Pyx_GetItemInt_Generic(PyObject *o, PyObject* j) { + PyObject *r; + if (!j) return NULL; + r = PyObject_GetItem(o, j); + Py_DECREF(j); + return r; +} +static CYTHON_INLINE PyObject *__Pyx_GetItemInt_List_Fast(PyObject *o, Py_ssize_t i, + CYTHON_NCP_UNUSED int wraparound, + CYTHON_NCP_UNUSED int boundscheck) { +#if CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS + Py_ssize_t wrapped_i = i; + if (wraparound & unlikely(i < 0)) { + wrapped_i += PyList_GET_SIZE(o); + } + if ((!boundscheck) || likely(__Pyx_is_valid_index(wrapped_i, PyList_GET_SIZE(o)))) { + PyObject *r = PyList_GET_ITEM(o, wrapped_i); + Py_INCREF(r); + return r; + } + return __Pyx_GetItemInt_Generic(o, PyInt_FromSsize_t(i)); +#else + return PySequence_GetItem(o, i); +#endif +} +static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Tuple_Fast(PyObject *o, Py_ssize_t i, + CYTHON_NCP_UNUSED int wraparound, + CYTHON_NCP_UNUSED int boundscheck) { +#if CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS + Py_ssize_t wrapped_i = i; + if (wraparound & unlikely(i < 0)) { + wrapped_i += PyTuple_GET_SIZE(o); + } + if ((!boundscheck) || likely(__Pyx_is_valid_index(wrapped_i, PyTuple_GET_SIZE(o)))) { + PyObject *r = PyTuple_GET_ITEM(o, wrapped_i); + Py_INCREF(r); + return r; + } + return __Pyx_GetItemInt_Generic(o, PyInt_FromSsize_t(i)); +#else + return PySequence_GetItem(o, i); +#endif +} +static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Fast(PyObject *o, Py_ssize_t i, int is_list, + CYTHON_NCP_UNUSED int wraparound, + CYTHON_NCP_UNUSED int boundscheck) { +#if CYTHON_ASSUME_SAFE_MACROS && !CYTHON_AVOID_BORROWED_REFS && CYTHON_USE_TYPE_SLOTS + if (is_list || PyList_CheckExact(o)) { + Py_ssize_t n = ((!wraparound) | likely(i >= 0)) ? i : i + PyList_GET_SIZE(o); + if ((!boundscheck) || (likely(__Pyx_is_valid_index(n, PyList_GET_SIZE(o))))) { + PyObject *r = PyList_GET_ITEM(o, n); + Py_INCREF(r); + return r; + } + } + else if (PyTuple_CheckExact(o)) { + Py_ssize_t n = ((!wraparound) | likely(i >= 0)) ? i : i + PyTuple_GET_SIZE(o); + if ((!boundscheck) || likely(__Pyx_is_valid_index(n, PyTuple_GET_SIZE(o)))) { + PyObject *r = PyTuple_GET_ITEM(o, n); + Py_INCREF(r); + return r; + } + } else { + PySequenceMethods *m = Py_TYPE(o)->tp_as_sequence; + if (likely(m && m->sq_item)) { + if (wraparound && unlikely(i < 0) && likely(m->sq_length)) { + Py_ssize_t l = m->sq_length(o); + if (likely(l >= 0)) { + i += l; + } else { + if (!PyErr_ExceptionMatches(PyExc_OverflowError)) + return NULL; + PyErr_Clear(); + } + } + return m->sq_item(o, i); + } + } +#else + if (is_list || PySequence_Check(o)) { + return PySequence_GetItem(o, i); + } +#endif + return __Pyx_GetItemInt_Generic(o, PyInt_FromSsize_t(i)); +} + +/* ObjectGetItem */ +#if CYTHON_USE_TYPE_SLOTS +static PyObject *__Pyx_PyObject_GetIndex(PyObject *obj, PyObject* index) { + PyObject *runerr; + Py_ssize_t key_value; + PySequenceMethods *m = Py_TYPE(obj)->tp_as_sequence; + if (unlikely(!(m && m->sq_item))) { + PyErr_Format(PyExc_TypeError, "'%.200s' object is not subscriptable", Py_TYPE(obj)->tp_name); + return NULL; + } + key_value = __Pyx_PyIndex_AsSsize_t(index); + if (likely(key_value != -1 || !(runerr = PyErr_Occurred()))) { + return __Pyx_GetItemInt_Fast(obj, key_value, 0, 1, 1); + } + if (PyErr_GivenExceptionMatches(runerr, PyExc_OverflowError)) { + PyErr_Clear(); + PyErr_Format(PyExc_IndexError, "cannot fit '%.200s' into an index-sized integer", Py_TYPE(index)->tp_name); + } + return NULL; +} +static PyObject *__Pyx_PyObject_GetItem(PyObject *obj, PyObject* key) { + PyMappingMethods *m = Py_TYPE(obj)->tp_as_mapping; + if (likely(m && m->mp_subscript)) { + return m->mp_subscript(obj, key); + } + return __Pyx_PyObject_GetIndex(obj, key); +} +#endif + +/* decode_c_string */ +static CYTHON_INLINE PyObject* __Pyx_decode_c_string( + const char* cstring, Py_ssize_t start, Py_ssize_t stop, + const char* encoding, const char* errors, + PyObject* (*decode_func)(const char *s, Py_ssize_t size, const char *errors)) { + Py_ssize_t length; + if (unlikely((start < 0) | (stop < 0))) { + size_t slen = strlen(cstring); + if (unlikely(slen > (size_t) PY_SSIZE_T_MAX)) { + PyErr_SetString(PyExc_OverflowError, + "c-string too long to convert to Python"); + return NULL; + } + length = (Py_ssize_t) slen; + if (start < 0) { + start += length; + if (start < 0) + start = 0; + } + if (stop < 0) + stop += length; + } + length = stop - start; + if (unlikely(length <= 0)) + return PyUnicode_FromUnicode(NULL, 0); + cstring += start; + if (decode_func) { + return decode_func(cstring, length, errors); + } else { + return PyUnicode_Decode(cstring, length, encoding, errors); + } +} + +/* GetAttr3 */ +static PyObject *__Pyx_GetAttr3Default(PyObject *d) { + __Pyx_PyThreadState_declare + __Pyx_PyThreadState_assign + if (unlikely(!__Pyx_PyErr_ExceptionMatches(PyExc_AttributeError))) + return NULL; + __Pyx_PyErr_Clear(); + Py_INCREF(d); + return d; +} +static CYTHON_INLINE PyObject *__Pyx_GetAttr3(PyObject *o, PyObject *n, PyObject *d) { + PyObject *r = __Pyx_GetAttr(o, n); + return (likely(r)) ? r : __Pyx_GetAttr3Default(d); +} + +/* SwapException */ +#if CYTHON_FAST_THREAD_STATE +static CYTHON_INLINE void __Pyx__ExceptionSwap(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb) { + PyObject *tmp_type, *tmp_value, *tmp_tb; + #if CYTHON_USE_EXC_INFO_STACK + _PyErr_StackItem *exc_info = tstate->exc_info; + tmp_type = exc_info->exc_type; + tmp_value = exc_info->exc_value; + tmp_tb = exc_info->exc_traceback; + exc_info->exc_type = *type; + exc_info->exc_value = *value; + exc_info->exc_traceback = *tb; + #else + tmp_type = tstate->exc_type; + tmp_value = tstate->exc_value; + tmp_tb = tstate->exc_traceback; + tstate->exc_type = *type; + tstate->exc_value = *value; + tstate->exc_traceback = *tb; + #endif + *type = tmp_type; + *value = tmp_value; + *tb = tmp_tb; +} +#else +static CYTHON_INLINE void __Pyx_ExceptionSwap(PyObject **type, PyObject **value, PyObject **tb) { + PyObject *tmp_type, *tmp_value, *tmp_tb; + PyErr_GetExcInfo(&tmp_type, &tmp_value, &tmp_tb); + PyErr_SetExcInfo(*type, *value, *tb); + *type = tmp_type; + *value = tmp_value; + *tb = tmp_tb; +} +#endif + +/* Import */ +static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level) { + PyObject *empty_list = 0; + PyObject *module = 0; + PyObject *global_dict = 0; + PyObject *empty_dict = 0; + PyObject *list; + #if PY_MAJOR_VERSION < 3 + PyObject *py_import; + py_import = __Pyx_PyObject_GetAttrStr(__pyx_b, __pyx_n_s_import); + if (!py_import) + goto bad; + #endif + if (from_list) + list = from_list; + else { + empty_list = PyList_New(0); + if (!empty_list) + goto bad; + list = empty_list; + } + global_dict = PyModule_GetDict(__pyx_m); + if (!global_dict) + goto bad; + empty_dict = PyDict_New(); + if (!empty_dict) + goto bad; + { + #if PY_MAJOR_VERSION >= 3 + if (level == -1) { + if (strchr(__Pyx_MODULE_NAME, '.')) { + module = PyImport_ImportModuleLevelObject( + name, global_dict, empty_dict, list, 1); + if (!module) { + if (!PyErr_ExceptionMatches(PyExc_ImportError)) + goto bad; + PyErr_Clear(); + } + } + level = 0; + } + #endif + if (!module) { + #if PY_MAJOR_VERSION < 3 + PyObject *py_level = PyInt_FromLong(level); + if (!py_level) + goto bad; + module = PyObject_CallFunctionObjArgs(py_import, + name, global_dict, empty_dict, list, py_level, (PyObject *)NULL); + Py_DECREF(py_level); + #else + module = PyImport_ImportModuleLevelObject( + name, global_dict, empty_dict, list, level); + #endif + } + } +bad: + #if PY_MAJOR_VERSION < 3 + Py_XDECREF(py_import); + #endif + Py_XDECREF(empty_list); + Py_XDECREF(empty_dict); + return module; +} + +/* FastTypeChecks */ +#if CYTHON_COMPILING_IN_CPYTHON +static int __Pyx_InBases(PyTypeObject *a, PyTypeObject *b) { + while (a) { + a = a->tp_base; + if (a == b) + return 1; + } + return b == &PyBaseObject_Type; +} +static CYTHON_INLINE int __Pyx_IsSubtype(PyTypeObject *a, PyTypeObject *b) { + PyObject *mro; + if (a == b) return 1; + mro = a->tp_mro; + if (likely(mro)) { + Py_ssize_t i, n; + n = PyTuple_GET_SIZE(mro); + for (i = 0; i < n; i++) { + if (PyTuple_GET_ITEM(mro, i) == (PyObject *)b) + return 1; + } + return 0; + } + return __Pyx_InBases(a, b); +} +#if PY_MAJOR_VERSION == 2 +static int __Pyx_inner_PyErr_GivenExceptionMatches2(PyObject *err, PyObject* exc_type1, PyObject* exc_type2) { + PyObject *exception, *value, *tb; + int res; + __Pyx_PyThreadState_declare + __Pyx_PyThreadState_assign + __Pyx_ErrFetch(&exception, &value, &tb); + res = exc_type1 ? PyObject_IsSubclass(err, exc_type1) : 0; + if (unlikely(res == -1)) { + PyErr_WriteUnraisable(err); + res = 0; + } + if (!res) { + res = PyObject_IsSubclass(err, exc_type2); + if (unlikely(res == -1)) { + PyErr_WriteUnraisable(err); + res = 0; + } + } + __Pyx_ErrRestore(exception, value, tb); + return res; +} +#else +static CYTHON_INLINE int __Pyx_inner_PyErr_GivenExceptionMatches2(PyObject *err, PyObject* exc_type1, PyObject *exc_type2) { + int res = exc_type1 ? __Pyx_IsSubtype((PyTypeObject*)err, (PyTypeObject*)exc_type1) : 0; + if (!res) { + res = __Pyx_IsSubtype((PyTypeObject*)err, (PyTypeObject*)exc_type2); + } + return res; +} +#endif +static int __Pyx_PyErr_GivenExceptionMatchesTuple(PyObject *exc_type, PyObject *tuple) { + Py_ssize_t i, n; + assert(PyExceptionClass_Check(exc_type)); + n = PyTuple_GET_SIZE(tuple); +#if PY_MAJOR_VERSION >= 3 + for (i=0; i= 0 || (x^b) >= 0)) + return PyInt_FromLong(x); + return PyLong_Type.tp_as_number->nb_add(op1, op2); + } + #endif + #if CYTHON_USE_PYLONG_INTERNALS + if (likely(PyLong_CheckExact(op1))) { + const long b = intval; + long a, x; +#ifdef HAVE_LONG_LONG + const PY_LONG_LONG llb = intval; + PY_LONG_LONG lla, llx; +#endif + const digit* digits = ((PyLongObject*)op1)->ob_digit; + const Py_ssize_t size = Py_SIZE(op1); + if (likely(__Pyx_sst_abs(size) <= 1)) { + a = likely(size) ? digits[0] : 0; + if (size == -1) a = -a; + } else { + switch (size) { + case -2: + if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) { + a = -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); + break; +#ifdef HAVE_LONG_LONG + } else if (8 * sizeof(PY_LONG_LONG) - 1 > 2 * PyLong_SHIFT) { + lla = -(PY_LONG_LONG) (((((unsigned PY_LONG_LONG)digits[1]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[0])); + goto long_long; +#endif + } + CYTHON_FALLTHROUGH; + case 2: + if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) { + a = (long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); + break; +#ifdef HAVE_LONG_LONG + } else if (8 * sizeof(PY_LONG_LONG) - 1 > 2 * PyLong_SHIFT) { + lla = (PY_LONG_LONG) (((((unsigned PY_LONG_LONG)digits[1]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[0])); + goto long_long; +#endif + } + CYTHON_FALLTHROUGH; + case -3: + if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) { + a = -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); + break; +#ifdef HAVE_LONG_LONG + } else if (8 * sizeof(PY_LONG_LONG) - 1 > 3 * PyLong_SHIFT) { + lla = -(PY_LONG_LONG) (((((((unsigned PY_LONG_LONG)digits[2]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[1]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[0])); + goto long_long; +#endif + } + CYTHON_FALLTHROUGH; + case 3: + if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) { + a = (long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); + break; +#ifdef HAVE_LONG_LONG + } else if (8 * sizeof(PY_LONG_LONG) - 1 > 3 * PyLong_SHIFT) { + lla = (PY_LONG_LONG) (((((((unsigned PY_LONG_LONG)digits[2]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[1]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[0])); + goto long_long; +#endif + } + CYTHON_FALLTHROUGH; + case -4: + if (8 * sizeof(long) - 1 > 4 * PyLong_SHIFT) { + a = -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); + break; +#ifdef HAVE_LONG_LONG + } else if (8 * sizeof(PY_LONG_LONG) - 1 > 4 * PyLong_SHIFT) { + lla = -(PY_LONG_LONG) (((((((((unsigned PY_LONG_LONG)digits[3]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[2]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[1]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[0])); + goto long_long; +#endif + } + CYTHON_FALLTHROUGH; + case 4: + if (8 * sizeof(long) - 1 > 4 * PyLong_SHIFT) { + a = (long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0])); + break; +#ifdef HAVE_LONG_LONG + } else if (8 * sizeof(PY_LONG_LONG) - 1 > 4 * PyLong_SHIFT) { + lla = (PY_LONG_LONG) (((((((((unsigned PY_LONG_LONG)digits[3]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[2]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[1]) << PyLong_SHIFT) | (unsigned PY_LONG_LONG)digits[0])); + goto long_long; +#endif + } + CYTHON_FALLTHROUGH; + default: return PyLong_Type.tp_as_number->nb_add(op1, op2); + } + } + x = a + b; + return PyLong_FromLong(x); +#ifdef HAVE_LONG_LONG + long_long: + llx = lla + llb; + return PyLong_FromLongLong(llx); +#endif + + + } + #endif + if (PyFloat_CheckExact(op1)) { + const long b = intval; + double a = PyFloat_AS_DOUBLE(op1); + double result; + PyFPE_START_PROTECT("add", return NULL) + result = ((double)a) + (double)b; + PyFPE_END_PROTECT(result) + return PyFloat_FromDouble(result); + } + return (inplace ? PyNumber_InPlaceAdd : PyNumber_Add)(op1, op2); +} +#endif + +/* None */ +static CYTHON_INLINE void __Pyx_RaiseUnboundLocalError(const char *varname) { + PyErr_Format(PyExc_UnboundLocalError, "local variable '%s' referenced before assignment", varname); +} + +/* ImportFrom */ +static PyObject* __Pyx_ImportFrom(PyObject* module, PyObject* name) { + PyObject* value = __Pyx_PyObject_GetAttrStr(module, name); + if (unlikely(!value) && PyErr_ExceptionMatches(PyExc_AttributeError)) { + PyErr_Format(PyExc_ImportError, + #if PY_MAJOR_VERSION < 3 + "cannot import name %.230s", PyString_AS_STRING(name)); + #else + "cannot import name %S", name); + #endif + } + return value; +} + +/* HasAttr */ +static CYTHON_INLINE int __Pyx_HasAttr(PyObject *o, PyObject *n) { + PyObject *r; + if (unlikely(!__Pyx_PyBaseString_Check(n))) { + PyErr_SetString(PyExc_TypeError, + "hasattr(): attribute name must be string"); + return -1; + } + r = __Pyx_GetAttr(o, n); + if (unlikely(!r)) { + PyErr_Clear(); + return 0; + } else { + Py_DECREF(r); + return 1; + } +} + +/* PyObject_GenericGetAttrNoDict */ +#if CYTHON_USE_TYPE_SLOTS && CYTHON_USE_PYTYPE_LOOKUP && PY_VERSION_HEX < 0x03070000 +static PyObject *__Pyx_RaiseGenericGetAttributeError(PyTypeObject *tp, PyObject *attr_name) { + PyErr_Format(PyExc_AttributeError, +#if PY_MAJOR_VERSION >= 3 + "'%.50s' object has no attribute '%U'", + tp->tp_name, attr_name); +#else + "'%.50s' object has no attribute '%.400s'", + tp->tp_name, PyString_AS_STRING(attr_name)); +#endif + return NULL; +} +static CYTHON_INLINE PyObject* __Pyx_PyObject_GenericGetAttrNoDict(PyObject* obj, PyObject* attr_name) { + PyObject *descr; + PyTypeObject *tp = Py_TYPE(obj); + if (unlikely(!PyString_Check(attr_name))) { + return PyObject_GenericGetAttr(obj, attr_name); + } + assert(!tp->tp_dictoffset); + descr = _PyType_Lookup(tp, attr_name); + if (unlikely(!descr)) { + return __Pyx_RaiseGenericGetAttributeError(tp, attr_name); + } + Py_INCREF(descr); + #if PY_MAJOR_VERSION < 3 + if (likely(PyType_HasFeature(Py_TYPE(descr), Py_TPFLAGS_HAVE_CLASS))) + #endif + { + descrgetfunc f = Py_TYPE(descr)->tp_descr_get; + if (unlikely(f)) { + PyObject *res = f(descr, obj, (PyObject *)tp); + Py_DECREF(descr); + return res; + } + } + return descr; +} +#endif + +/* PyObject_GenericGetAttr */ +#if CYTHON_USE_TYPE_SLOTS && CYTHON_USE_PYTYPE_LOOKUP && PY_VERSION_HEX < 0x03070000 +static PyObject* __Pyx_PyObject_GenericGetAttr(PyObject* obj, PyObject* attr_name) { + if (unlikely(Py_TYPE(obj)->tp_dictoffset)) { + return PyObject_GenericGetAttr(obj, attr_name); + } + return __Pyx_PyObject_GenericGetAttrNoDict(obj, attr_name); +} +#endif + +/* SetVTable */ +static int __Pyx_SetVtable(PyObject *dict, void *vtable) { +#if PY_VERSION_HEX >= 0x02070000 + PyObject *ob = PyCapsule_New(vtable, 0, 0); +#else + PyObject *ob = PyCObject_FromVoidPtr(vtable, 0); +#endif + if (!ob) + goto bad; + if (PyDict_SetItem(dict, __pyx_n_s_pyx_vtable, ob) < 0) + goto bad; + Py_DECREF(ob); + return 0; +bad: + Py_XDECREF(ob); + return -1; +} + +/* SetupReduce */ +static int __Pyx_setup_reduce_is_named(PyObject* meth, PyObject* name) { + int ret; + PyObject *name_attr; + name_attr = __Pyx_PyObject_GetAttrStr(meth, __pyx_n_s_name_2); + if (likely(name_attr)) { + ret = PyObject_RichCompareBool(name_attr, name, Py_EQ); + } else { + ret = -1; + } + if (unlikely(ret < 0)) { + PyErr_Clear(); + ret = 0; + } + Py_XDECREF(name_attr); + return ret; +} +static int __Pyx_setup_reduce(PyObject* type_obj) { + int ret = 0; + PyObject *object_reduce = NULL; + PyObject *object_reduce_ex = NULL; + PyObject *reduce = NULL; + PyObject *reduce_ex = NULL; + PyObject *reduce_cython = NULL; + PyObject *setstate = NULL; + PyObject *setstate_cython = NULL; +#if CYTHON_USE_PYTYPE_LOOKUP + if (_PyType_Lookup((PyTypeObject*)type_obj, __pyx_n_s_getstate)) goto GOOD; +#else + if (PyObject_HasAttr(type_obj, __pyx_n_s_getstate)) goto GOOD; +#endif +#if CYTHON_USE_PYTYPE_LOOKUP + object_reduce_ex = _PyType_Lookup(&PyBaseObject_Type, __pyx_n_s_reduce_ex); if (!object_reduce_ex) goto BAD; +#else + object_reduce_ex = __Pyx_PyObject_GetAttrStr((PyObject*)&PyBaseObject_Type, __pyx_n_s_reduce_ex); if (!object_reduce_ex) goto BAD; +#endif + reduce_ex = __Pyx_PyObject_GetAttrStr(type_obj, __pyx_n_s_reduce_ex); if (unlikely(!reduce_ex)) goto BAD; + if (reduce_ex == object_reduce_ex) { +#if CYTHON_USE_PYTYPE_LOOKUP + object_reduce = _PyType_Lookup(&PyBaseObject_Type, __pyx_n_s_reduce); if (!object_reduce) goto BAD; +#else + object_reduce = __Pyx_PyObject_GetAttrStr((PyObject*)&PyBaseObject_Type, __pyx_n_s_reduce); if (!object_reduce) goto BAD; +#endif + reduce = __Pyx_PyObject_GetAttrStr(type_obj, __pyx_n_s_reduce); if (unlikely(!reduce)) goto BAD; + if (reduce == object_reduce || __Pyx_setup_reduce_is_named(reduce, __pyx_n_s_reduce_cython)) { + reduce_cython = __Pyx_PyObject_GetAttrStr(type_obj, __pyx_n_s_reduce_cython); if (unlikely(!reduce_cython)) goto BAD; + ret = PyDict_SetItem(((PyTypeObject*)type_obj)->tp_dict, __pyx_n_s_reduce, reduce_cython); if (unlikely(ret < 0)) goto BAD; + ret = PyDict_DelItem(((PyTypeObject*)type_obj)->tp_dict, __pyx_n_s_reduce_cython); if (unlikely(ret < 0)) goto BAD; + setstate = __Pyx_PyObject_GetAttrStr(type_obj, __pyx_n_s_setstate); + if (!setstate) PyErr_Clear(); + if (!setstate || __Pyx_setup_reduce_is_named(setstate, __pyx_n_s_setstate_cython)) { + setstate_cython = __Pyx_PyObject_GetAttrStr(type_obj, __pyx_n_s_setstate_cython); if (unlikely(!setstate_cython)) goto BAD; + ret = PyDict_SetItem(((PyTypeObject*)type_obj)->tp_dict, __pyx_n_s_setstate, setstate_cython); if (unlikely(ret < 0)) goto BAD; + ret = PyDict_DelItem(((PyTypeObject*)type_obj)->tp_dict, __pyx_n_s_setstate_cython); if (unlikely(ret < 0)) goto BAD; + } + PyType_Modified((PyTypeObject*)type_obj); + } + } + goto GOOD; +BAD: + if (!PyErr_Occurred()) + PyErr_Format(PyExc_RuntimeError, "Unable to initialize pickling for %s", ((PyTypeObject*)type_obj)->tp_name); + ret = -1; +GOOD: +#if !CYTHON_USE_PYTYPE_LOOKUP + Py_XDECREF(object_reduce); + Py_XDECREF(object_reduce_ex); +#endif + Py_XDECREF(reduce); + Py_XDECREF(reduce_ex); + Py_XDECREF(reduce_cython); + Py_XDECREF(setstate); + Py_XDECREF(setstate_cython); + return ret; +} + +/* TypeImport */ +#ifndef __PYX_HAVE_RT_ImportType +#define __PYX_HAVE_RT_ImportType +static PyTypeObject *__Pyx_ImportType(PyObject *module, const char *module_name, const char *class_name, + size_t size, enum __Pyx_ImportType_CheckSize check_size) +{ + PyObject *result = 0; + char warning[200]; + Py_ssize_t basicsize; +#ifdef Py_LIMITED_API + PyObject *py_basicsize; +#endif + result = PyObject_GetAttrString(module, class_name); + if (!result) + goto bad; + if (!PyType_Check(result)) { + PyErr_Format(PyExc_TypeError, + "%.200s.%.200s is not a type object", + module_name, class_name); + goto bad; + } +#ifndef Py_LIMITED_API + basicsize = ((PyTypeObject *)result)->tp_basicsize; +#else + py_basicsize = PyObject_GetAttrString(result, "__basicsize__"); + if (!py_basicsize) + goto bad; + basicsize = PyLong_AsSsize_t(py_basicsize); + Py_DECREF(py_basicsize); + py_basicsize = 0; + if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred()) + goto bad; +#endif + if ((size_t)basicsize < size) { + PyErr_Format(PyExc_ValueError, + "%.200s.%.200s size changed, may indicate binary incompatibility. " + "Expected %zd from C header, got %zd from PyObject", + module_name, class_name, size, basicsize); + goto bad; + } + if (check_size == __Pyx_ImportType_CheckSize_Error && (size_t)basicsize != size) { + PyErr_Format(PyExc_ValueError, + "%.200s.%.200s size changed, may indicate binary incompatibility. " + "Expected %zd from C header, got %zd from PyObject", + module_name, class_name, size, basicsize); + goto bad; + } + else if (check_size == __Pyx_ImportType_CheckSize_Warn && (size_t)basicsize > size) { + PyOS_snprintf(warning, sizeof(warning), + "%s.%s size changed, may indicate binary incompatibility. " + "Expected %zd from C header, got %zd from PyObject", + module_name, class_name, size, basicsize); + if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad; + } + return (PyTypeObject *)result; +bad: + Py_XDECREF(result); + return NULL; +} +#endif + +/* CLineInTraceback */ +#ifndef CYTHON_CLINE_IN_TRACEBACK +static int __Pyx_CLineForTraceback(PyThreadState *tstate, int c_line) { + PyObject *use_cline; + PyObject *ptype, *pvalue, *ptraceback; +#if CYTHON_COMPILING_IN_CPYTHON + PyObject **cython_runtime_dict; +#endif + if (unlikely(!__pyx_cython_runtime)) { + return c_line; + } + __Pyx_ErrFetchInState(tstate, &ptype, &pvalue, &ptraceback); +#if CYTHON_COMPILING_IN_CPYTHON + cython_runtime_dict = _PyObject_GetDictPtr(__pyx_cython_runtime); + if (likely(cython_runtime_dict)) { + __PYX_PY_DICT_LOOKUP_IF_MODIFIED( + use_cline, *cython_runtime_dict, + __Pyx_PyDict_GetItemStr(*cython_runtime_dict, __pyx_n_s_cline_in_traceback)) + } else +#endif + { + PyObject *use_cline_obj = __Pyx_PyObject_GetAttrStr(__pyx_cython_runtime, __pyx_n_s_cline_in_traceback); + if (use_cline_obj) { + use_cline = PyObject_Not(use_cline_obj) ? Py_False : Py_True; + Py_DECREF(use_cline_obj); + } else { + PyErr_Clear(); + use_cline = NULL; + } + } + if (!use_cline) { + c_line = 0; + PyObject_SetAttr(__pyx_cython_runtime, __pyx_n_s_cline_in_traceback, Py_False); + } + else if (use_cline == Py_False || (use_cline != Py_True && PyObject_Not(use_cline) != 0)) { + c_line = 0; + } + __Pyx_ErrRestoreInState(tstate, ptype, pvalue, ptraceback); + return c_line; +} +#endif + +/* CodeObjectCache */ +static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) { + int start = 0, mid = 0, end = count - 1; + if (end >= 0 && code_line > entries[end].code_line) { + return count; + } + while (start < end) { + mid = start + (end - start) / 2; + if (code_line < entries[mid].code_line) { + end = mid; + } else if (code_line > entries[mid].code_line) { + start = mid + 1; + } else { + return mid; + } + } + if (code_line <= entries[mid].code_line) { + return mid; + } else { + return mid + 1; + } +} +static PyCodeObject *__pyx_find_code_object(int code_line) { + PyCodeObject* code_object; + int pos; + if (unlikely(!code_line) || unlikely(!__pyx_code_cache.entries)) { + return NULL; + } + pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line); + if (unlikely(pos >= __pyx_code_cache.count) || unlikely(__pyx_code_cache.entries[pos].code_line != code_line)) { + return NULL; + } + code_object = __pyx_code_cache.entries[pos].code_object; + Py_INCREF(code_object); + return code_object; +} +static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) { + int pos, i; + __Pyx_CodeObjectCacheEntry* entries = __pyx_code_cache.entries; + if (unlikely(!code_line)) { + return; + } + if (unlikely(!entries)) { + entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Malloc(64*sizeof(__Pyx_CodeObjectCacheEntry)); + if (likely(entries)) { + __pyx_code_cache.entries = entries; + __pyx_code_cache.max_count = 64; + __pyx_code_cache.count = 1; + entries[0].code_line = code_line; + entries[0].code_object = code_object; + Py_INCREF(code_object); + } + return; + } + pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line); + if ((pos < __pyx_code_cache.count) && unlikely(__pyx_code_cache.entries[pos].code_line == code_line)) { + PyCodeObject* tmp = entries[pos].code_object; + entries[pos].code_object = code_object; + Py_DECREF(tmp); + return; + } + if (__pyx_code_cache.count == __pyx_code_cache.max_count) { + int new_max = __pyx_code_cache.max_count + 64; + entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Realloc( + __pyx_code_cache.entries, (size_t)new_max*sizeof(__Pyx_CodeObjectCacheEntry)); + if (unlikely(!entries)) { + return; + } + __pyx_code_cache.entries = entries; + __pyx_code_cache.max_count = new_max; + } + for (i=__pyx_code_cache.count; i>pos; i--) { + entries[i] = entries[i-1]; + } + entries[pos].code_line = code_line; + entries[pos].code_object = code_object; + __pyx_code_cache.count++; + Py_INCREF(code_object); +} + +/* AddTraceback */ +#include "compile.h" +#include "frameobject.h" +#include "traceback.h" +static PyCodeObject* __Pyx_CreateCodeObjectForTraceback( + const char *funcname, int c_line, + int py_line, const char *filename) { + PyCodeObject *py_code = 0; + PyObject *py_srcfile = 0; + PyObject *py_funcname = 0; + #if PY_MAJOR_VERSION < 3 + py_srcfile = PyString_FromString(filename); + #else + py_srcfile = PyUnicode_FromString(filename); + #endif + if (!py_srcfile) goto bad; + if (c_line) { + #if PY_MAJOR_VERSION < 3 + py_funcname = PyString_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line); + #else + py_funcname = PyUnicode_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line); + #endif + } + else { + #if PY_MAJOR_VERSION < 3 + py_funcname = PyString_FromString(funcname); + #else + py_funcname = PyUnicode_FromString(funcname); + #endif + } + if (!py_funcname) goto bad; + py_code = __Pyx_PyCode_New( + 0, + 0, + 0, + 0, + 0, + __pyx_empty_bytes, /*PyObject *code,*/ + __pyx_empty_tuple, /*PyObject *consts,*/ + __pyx_empty_tuple, /*PyObject *names,*/ + __pyx_empty_tuple, /*PyObject *varnames,*/ + __pyx_empty_tuple, /*PyObject *freevars,*/ + __pyx_empty_tuple, /*PyObject *cellvars,*/ + py_srcfile, /*PyObject *filename,*/ + py_funcname, /*PyObject *name,*/ + py_line, + __pyx_empty_bytes /*PyObject *lnotab*/ + ); + Py_DECREF(py_srcfile); + Py_DECREF(py_funcname); + return py_code; +bad: + Py_XDECREF(py_srcfile); + Py_XDECREF(py_funcname); + return NULL; +} +static void __Pyx_AddTraceback(const char *funcname, int c_line, + int py_line, const char *filename) { + PyCodeObject *py_code = 0; + PyFrameObject *py_frame = 0; + PyThreadState *tstate = __Pyx_PyThreadState_Current; + if (c_line) { + c_line = __Pyx_CLineForTraceback(tstate, c_line); + } + py_code = __pyx_find_code_object(c_line ? -c_line : py_line); + if (!py_code) { + py_code = __Pyx_CreateCodeObjectForTraceback( + funcname, c_line, py_line, filename); + if (!py_code) goto bad; + __pyx_insert_code_object(c_line ? -c_line : py_line, py_code); + } + py_frame = PyFrame_New( + tstate, /*PyThreadState *tstate,*/ + py_code, /*PyCodeObject *code,*/ + __pyx_d, /*PyObject *globals,*/ + 0 /*PyObject *locals*/ + ); + if (!py_frame) goto bad; + __Pyx_PyFrame_SetLineNumber(py_frame, py_line); + PyTraceBack_Here(py_frame); +bad: + Py_XDECREF(py_code); + Py_XDECREF(py_frame); +} + +#if PY_MAJOR_VERSION < 3 +static int __Pyx_GetBuffer(PyObject *obj, Py_buffer *view, int flags) { + if (PyObject_CheckBuffer(obj)) return PyObject_GetBuffer(obj, view, flags); + if (__Pyx_TypeCheck(obj, __pyx_ptype_5numpy_ndarray)) return __pyx_pw_5numpy_7ndarray_1__getbuffer__(obj, view, flags); + if (__Pyx_TypeCheck(obj, __pyx_array_type)) return __pyx_array_getbuffer(obj, view, flags); + if (__Pyx_TypeCheck(obj, __pyx_memoryview_type)) return __pyx_memoryview_getbuffer(obj, view, flags); + PyErr_Format(PyExc_TypeError, "'%.200s' does not have the buffer interface", Py_TYPE(obj)->tp_name); + return -1; +} +static void __Pyx_ReleaseBuffer(Py_buffer *view) { + PyObject *obj = view->obj; + if (!obj) return; + if (PyObject_CheckBuffer(obj)) { + PyBuffer_Release(view); + return; + } + if ((0)) {} + else if (__Pyx_TypeCheck(obj, __pyx_ptype_5numpy_ndarray)) __pyx_pw_5numpy_7ndarray_3__releasebuffer__(obj, view); + view->obj = NULL; + Py_DECREF(obj); +} +#endif + + +/* MemviewSliceIsContig */ +static int +__pyx_memviewslice_is_contig(const __Pyx_memviewslice mvs, char order, int ndim) +{ + int i, index, step, start; + Py_ssize_t itemsize = mvs.memview->view.itemsize; + if (order == 'F') { + step = 1; + start = 0; + } else { + step = -1; + start = ndim - 1; + } + for (i = 0; i < ndim; i++) { + index = start + step * i; + if (mvs.suboffsets[index] >= 0 || mvs.strides[index] != itemsize) + return 0; + itemsize *= mvs.shape[index]; + } + return 1; +} + +/* OverlappingSlices */ +static void +__pyx_get_array_memory_extents(__Pyx_memviewslice *slice, + void **out_start, void **out_end, + int ndim, size_t itemsize) +{ + char *start, *end; + int i; + start = end = slice->data; + for (i = 0; i < ndim; i++) { + Py_ssize_t stride = slice->strides[i]; + Py_ssize_t extent = slice->shape[i]; + if (extent == 0) { + *out_start = *out_end = start; + return; + } else { + if (stride > 0) + end += stride * (extent - 1); + else + start += stride * (extent - 1); + } + } + *out_start = start; + *out_end = end + itemsize; +} +static int +__pyx_slices_overlap(__Pyx_memviewslice *slice1, + __Pyx_memviewslice *slice2, + int ndim, size_t itemsize) +{ + void *start1, *end1, *start2, *end2; + __pyx_get_array_memory_extents(slice1, &start1, &end1, ndim, itemsize); + __pyx_get_array_memory_extents(slice2, &start2, &end2, ndim, itemsize); + return (start1 < end2) && (start2 < end1); +} + +/* Capsule */ +static CYTHON_INLINE PyObject * +__pyx_capsule_create(void *p, CYTHON_UNUSED const char *sig) +{ + PyObject *cobj; +#if PY_VERSION_HEX >= 0x02070000 + cobj = PyCapsule_New(p, sig, NULL); +#else + cobj = PyCObject_FromVoidPtr(p, NULL); +#endif + return cobj; +} + +/* IsLittleEndian */ +static CYTHON_INLINE int __Pyx_Is_Little_Endian(void) +{ + union { + uint32_t u32; + uint8_t u8[4]; + } S; + S.u32 = 0x01020304; + return S.u8[0] == 4; +} + +/* BufferFormatCheck */ static void __Pyx_BufFmt_Init(__Pyx_BufFmt_Context* ctx, __Pyx_BufFmt_StackElem* stack, __Pyx_TypeInfo* type) { @@ -18574,7 +24245,7 @@ static int __Pyx_BufFmt_ProcessTypeChunk(__Pyx_BufFmt_Context* ctx) { ctx->is_complex = 0; return 0; } -static CYTHON_INLINE PyObject * +static PyObject * __pyx_buffmt_parse_array(__Pyx_BufFmt_Context* ctx, const char** tsp) { const char *ts = *tsp; @@ -18639,7 +24310,7 @@ static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const cha ++ts; break; case '<': - if (!__Pyx_IsLittleEndian()) { + if (!__Pyx_Is_Little_Endian()) { PyErr_SetString(PyExc_ValueError, "Little-endian buffer not supported on big-endian compiler"); return NULL; } @@ -18648,7 +24319,7 @@ static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const cha break; case '>': case '!': - if (__Pyx_IsLittleEndian()) { + if (__Pyx_Is_Little_Endian()) { PyErr_SetString(PyExc_ValueError, "Big-endian buffer not supported on little-endian compiler"); return NULL; } @@ -18712,6 +24383,7 @@ static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const cha __Pyx_BufFmt_RaiseUnexpectedChar('Z'); return NULL; } + CYTHON_FALLTHROUGH; case 'c': case 'b': case 'B': case 'h': case 'H': case 'i': case 'I': case 'l': case 'L': case 'q': case 'Q': case 'f': case 'd': case 'g': @@ -18724,6 +24396,7 @@ static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const cha ++ts; break; } + CYTHON_FALLTHROUGH; case 's': if (__Pyx_BufFmt_ProcessTypeChunk(ctx) == -1) return NULL; ctx->enc_count = ctx->new_count; @@ -18751,1082 +24424,9 @@ static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const cha } } } -static CYTHON_INLINE void __Pyx_ZeroBuffer(Py_buffer* buf) { - buf->buf = NULL; - buf->obj = NULL; - buf->strides = __Pyx_zeros; - buf->shape = __Pyx_zeros; - buf->suboffsets = __Pyx_minusones; -} -static CYTHON_INLINE int __Pyx_GetBufferAndValidate( - Py_buffer* buf, PyObject* obj, __Pyx_TypeInfo* dtype, int flags, - int nd, int cast, __Pyx_BufFmt_StackElem* stack) -{ - if (obj == Py_None || obj == NULL) { - __Pyx_ZeroBuffer(buf); - return 0; - } - buf->buf = NULL; - if (__Pyx_GetBuffer(obj, buf, flags) == -1) goto fail; - if (buf->ndim != nd) { - PyErr_Format(PyExc_ValueError, - "Buffer has wrong number of dimensions (expected %d, got %d)", - nd, buf->ndim); - goto fail; - } - if (!cast) { - __Pyx_BufFmt_Context ctx; - __Pyx_BufFmt_Init(&ctx, stack, dtype); - if (!__Pyx_BufFmt_CheckString(&ctx, buf->format)) goto fail; - } - if ((unsigned)buf->itemsize != dtype->size) { - PyErr_Format(PyExc_ValueError, - "Item size of buffer (%" CYTHON_FORMAT_SSIZE_T "d byte%s) does not match size of '%s' (%" CYTHON_FORMAT_SSIZE_T "d byte%s)", - buf->itemsize, (buf->itemsize > 1) ? "s" : "", - dtype->name, (Py_ssize_t)dtype->size, (dtype->size > 1) ? "s" : ""); - goto fail; - } - if (buf->suboffsets == NULL) buf->suboffsets = __Pyx_minusones; - return 0; -fail:; - __Pyx_ZeroBuffer(buf); - return -1; -} -static CYTHON_INLINE void __Pyx_SafeReleaseBuffer(Py_buffer* info) { - if (info->buf == NULL) return; - if (info->suboffsets == __Pyx_minusones) info->suboffsets = NULL; - __Pyx_ReleaseBuffer(info); -} -static int -__Pyx_init_memviewslice(struct __pyx_memoryview_obj *memview, - int ndim, - __Pyx_memviewslice *memviewslice, - int memview_is_new_reference) -{ - __Pyx_RefNannyDeclarations - int i, retval=-1; - Py_buffer *buf = &memview->view; - __Pyx_RefNannySetupContext("init_memviewslice", 0); - if (!buf) { - PyErr_SetString(PyExc_ValueError, - "buf is NULL."); - goto fail; - } else if (memviewslice->memview || memviewslice->data) { - PyErr_SetString(PyExc_ValueError, - "memviewslice is already initialized!"); - goto fail; - } - if (buf->strides) { - for (i = 0; i < ndim; i++) { - memviewslice->strides[i] = buf->strides[i]; - } - } else { - Py_ssize_t stride = buf->itemsize; - for (i = ndim - 1; i >= 0; i--) { - memviewslice->strides[i] = stride; - stride *= buf->shape[i]; - } - } - for (i = 0; i < ndim; i++) { - memviewslice->shape[i] = buf->shape[i]; - if (buf->suboffsets) { - memviewslice->suboffsets[i] = buf->suboffsets[i]; - } else { - memviewslice->suboffsets[i] = -1; - } - } - memviewslice->memview = memview; - memviewslice->data = (char *)buf->buf; - if (__pyx_add_acquisition_count(memview) == 0 && !memview_is_new_reference) { - Py_INCREF(memview); - } - retval = 0; - goto no_fail; -fail: - memviewslice->memview = 0; - memviewslice->data = 0; - retval = -1; -no_fail: - __Pyx_RefNannyFinishContext(); - return retval; -} -static CYTHON_INLINE void __pyx_fatalerror(const char *fmt, ...) { - va_list vargs; - char msg[200]; - va_start(vargs, fmt); -#ifdef HAVE_STDARG_PROTOTYPES - va_start(vargs, fmt); -#else - va_start(vargs); -#endif - vsnprintf(msg, 200, fmt, vargs); - Py_FatalError(msg); - va_end(vargs); -} -static CYTHON_INLINE int -__pyx_add_acquisition_count_locked(__pyx_atomic_int *acquisition_count, - PyThread_type_lock lock) -{ - int result; - PyThread_acquire_lock(lock, 1); - result = (*acquisition_count)++; - PyThread_release_lock(lock); - return result; -} -static CYTHON_INLINE int -__pyx_sub_acquisition_count_locked(__pyx_atomic_int *acquisition_count, - PyThread_type_lock lock) -{ - int result; - PyThread_acquire_lock(lock, 1); - result = (*acquisition_count)--; - PyThread_release_lock(lock); - return result; -} -static CYTHON_INLINE void -__Pyx_INC_MEMVIEW(__Pyx_memviewslice *memslice, int have_gil, int lineno) -{ - int first_time; - struct __pyx_memoryview_obj *memview = memslice->memview; - if (!memview || (PyObject *) memview == Py_None) - return; - if (__pyx_get_slice_count(memview) < 0) - __pyx_fatalerror("Acquisition count is %d (line %d)", - __pyx_get_slice_count(memview), lineno); - first_time = __pyx_add_acquisition_count(memview) == 0; - if (first_time) { - if (have_gil) { - Py_INCREF((PyObject *) memview); - } else { - PyGILState_STATE _gilstate = PyGILState_Ensure(); - Py_INCREF((PyObject *) memview); - PyGILState_Release(_gilstate); - } - } -} -static CYTHON_INLINE void __Pyx_XDEC_MEMVIEW(__Pyx_memviewslice *memslice, - int have_gil, int lineno) { - int last_time; - struct __pyx_memoryview_obj *memview = memslice->memview; - if (!memview ) { - return; - } else if ((PyObject *) memview == Py_None) { - memslice->memview = NULL; - return; - } - if (__pyx_get_slice_count(memview) <= 0) - __pyx_fatalerror("Acquisition count is %d (line %d)", - __pyx_get_slice_count(memview), lineno); - last_time = __pyx_sub_acquisition_count(memview) == 1; - memslice->data = NULL; - if (last_time) { - if (have_gil) { - Py_CLEAR(memslice->memview); - } else { - PyGILState_STATE _gilstate = PyGILState_Ensure(); - Py_CLEAR(memslice->memview); - PyGILState_Release(_gilstate); - } - } else { - memslice->memview = NULL; - } -} - -static CYTHON_INLINE long __Pyx_div_long(long a, long b) { - long q = a / b; - long r = a - q*b; - q -= ((r != 0) & ((r ^ b) < 0)); - return q; -} - -static CYTHON_INLINE void __Pyx_ErrRestore(PyObject *type, PyObject *value, PyObject *tb) { -#if CYTHON_COMPILING_IN_CPYTHON - PyObject *tmp_type, *tmp_value, *tmp_tb; - PyThreadState *tstate = PyThreadState_GET(); - tmp_type = tstate->curexc_type; - tmp_value = tstate->curexc_value; - tmp_tb = tstate->curexc_traceback; - tstate->curexc_type = type; - tstate->curexc_value = value; - tstate->curexc_traceback = tb; - Py_XDECREF(tmp_type); - Py_XDECREF(tmp_value); - Py_XDECREF(tmp_tb); -#else - PyErr_Restore(type, value, tb); -#endif -} -static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb) { -#if CYTHON_COMPILING_IN_CPYTHON - PyThreadState *tstate = PyThreadState_GET(); - *type = tstate->curexc_type; - *value = tstate->curexc_value; - *tb = tstate->curexc_traceback; - tstate->curexc_type = 0; - tstate->curexc_value = 0; - tstate->curexc_traceback = 0; -#else - PyErr_Fetch(type, value, tb); -#endif -} - -static void __Pyx_WriteUnraisable(const char *name, CYTHON_UNUSED int clineno, - CYTHON_UNUSED int lineno, CYTHON_UNUSED const char *filename, - int full_traceback) { - PyObject *old_exc, *old_val, *old_tb; - PyObject *ctx; - __Pyx_ErrFetch(&old_exc, &old_val, &old_tb); - if (full_traceback) { - Py_XINCREF(old_exc); - Py_XINCREF(old_val); - Py_XINCREF(old_tb); - __Pyx_ErrRestore(old_exc, old_val, old_tb); - PyErr_PrintEx(1); - } - #if PY_MAJOR_VERSION < 3 - ctx = PyString_FromString(name); - #else - ctx = PyUnicode_FromString(name); - #endif - __Pyx_ErrRestore(old_exc, old_val, old_tb); - if (!ctx) { - PyErr_WriteUnraisable(Py_None); - } else { - PyErr_WriteUnraisable(ctx); - Py_DECREF(ctx); - } -} - -#if PY_MAJOR_VERSION < 3 -static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, - CYTHON_UNUSED PyObject *cause) { - Py_XINCREF(type); - if (!value || value == Py_None) - value = NULL; - else - Py_INCREF(value); - if (!tb || tb == Py_None) - tb = NULL; - else { - Py_INCREF(tb); - if (!PyTraceBack_Check(tb)) { - PyErr_SetString(PyExc_TypeError, - "raise: arg 3 must be a traceback or None"); - goto raise_error; - } - } - if (PyType_Check(type)) { -#if CYTHON_COMPILING_IN_PYPY - if (!value) { - Py_INCREF(Py_None); - value = Py_None; - } -#endif - PyErr_NormalizeException(&type, &value, &tb); - } else { - if (value) { - PyErr_SetString(PyExc_TypeError, - "instance exception may not have a separate value"); - goto raise_error; - } - value = type; - type = (PyObject*) Py_TYPE(type); - Py_INCREF(type); - if (!PyType_IsSubtype((PyTypeObject *)type, (PyTypeObject *)PyExc_BaseException)) { - PyErr_SetString(PyExc_TypeError, - "raise: exception class must be a subclass of BaseException"); - goto raise_error; - } - } - __Pyx_ErrRestore(type, value, tb); - return; -raise_error: - Py_XDECREF(value); - Py_XDECREF(type); - Py_XDECREF(tb); - return; -} -#else -static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause) { - PyObject* owned_instance = NULL; - if (tb == Py_None) { - tb = 0; - } else if (tb && !PyTraceBack_Check(tb)) { - PyErr_SetString(PyExc_TypeError, - "raise: arg 3 must be a traceback or None"); - goto bad; - } - if (value == Py_None) - value = 0; - if (PyExceptionInstance_Check(type)) { - if (value) { - PyErr_SetString(PyExc_TypeError, - "instance exception may not have a separate value"); - goto bad; - } - value = type; - type = (PyObject*) Py_TYPE(value); - } else if (PyExceptionClass_Check(type)) { - PyObject *instance_class = NULL; - if (value && PyExceptionInstance_Check(value)) { - instance_class = (PyObject*) Py_TYPE(value); - if (instance_class != type) { - if (PyObject_IsSubclass(instance_class, type)) { - type = instance_class; - } else { - instance_class = NULL; - } - } - } - if (!instance_class) { - PyObject *args; - if (!value) - args = PyTuple_New(0); - else if (PyTuple_Check(value)) { - Py_INCREF(value); - args = value; - } else - args = PyTuple_Pack(1, value); - if (!args) - goto bad; - owned_instance = PyObject_Call(type, args, NULL); - Py_DECREF(args); - if (!owned_instance) - goto bad; - value = owned_instance; - if (!PyExceptionInstance_Check(value)) { - PyErr_Format(PyExc_TypeError, - "calling %R should have returned an instance of " - "BaseException, not %R", - type, Py_TYPE(value)); - goto bad; - } - } - } else { - PyErr_SetString(PyExc_TypeError, - "raise: exception class must be a subclass of BaseException"); - goto bad; - } -#if PY_VERSION_HEX >= 0x03030000 - if (cause) { -#else - if (cause && cause != Py_None) { -#endif - PyObject *fixed_cause; - if (cause == Py_None) { - fixed_cause = NULL; - } else if (PyExceptionClass_Check(cause)) { - fixed_cause = PyObject_CallObject(cause, NULL); - if (fixed_cause == NULL) - goto bad; - } else if (PyExceptionInstance_Check(cause)) { - fixed_cause = cause; - Py_INCREF(fixed_cause); - } else { - PyErr_SetString(PyExc_TypeError, - "exception causes must derive from " - "BaseException"); - goto bad; - } - PyException_SetCause(value, fixed_cause); - } - PyErr_SetObject(type, value); - if (tb) { - PyThreadState *tstate = PyThreadState_GET(); - PyObject* tmp_tb = tstate->curexc_traceback; - if (tb != tmp_tb) { - Py_INCREF(tb); - tstate->curexc_traceback = tb; - Py_XDECREF(tmp_tb); - } - } -bad: - Py_XDECREF(owned_instance); - return; -} -#endif - -static CYTHON_INLINE void __Pyx_RaiseTooManyValuesError(Py_ssize_t expected) { - PyErr_Format(PyExc_ValueError, - "too many values to unpack (expected %" CYTHON_FORMAT_SSIZE_T "d)", expected); -} - -static CYTHON_INLINE void __Pyx_RaiseNeedMoreValuesError(Py_ssize_t index) { - PyErr_Format(PyExc_ValueError, - "need more than %" CYTHON_FORMAT_SSIZE_T "d value%.1s to unpack", - index, (index == 1) ? "" : "s"); -} - -static CYTHON_INLINE void __Pyx_RaiseNoneNotIterableError(void) { - PyErr_SetString(PyExc_TypeError, "'NoneType' object is not iterable"); -} - -static CYTHON_INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type) { - if (unlikely(!type)) { - PyErr_SetString(PyExc_SystemError, "Missing type object"); - return 0; - } - if (likely(PyObject_TypeCheck(obj, type))) - return 1; - PyErr_Format(PyExc_TypeError, "Cannot convert %.200s to %.200s", - Py_TYPE(obj)->tp_name, type->tp_name); - return 0; -} - -static void __Pyx_RaiseArgumentTypeInvalid(const char* name, PyObject *obj, PyTypeObject *type) { - PyErr_Format(PyExc_TypeError, - "Argument '%.200s' has incorrect type (expected %.200s, got %.200s)", - name, type->tp_name, Py_TYPE(obj)->tp_name); -} -static CYTHON_INLINE int __Pyx_ArgTypeTest(PyObject *obj, PyTypeObject *type, int none_allowed, - const char *name, int exact) -{ - if (unlikely(!type)) { - PyErr_SetString(PyExc_SystemError, "Missing type object"); - return 0; - } - if (none_allowed && obj == Py_None) return 1; - else if (exact) { - if (likely(Py_TYPE(obj) == type)) return 1; - #if PY_MAJOR_VERSION == 2 - else if ((type == &PyBaseString_Type) && likely(__Pyx_PyBaseString_CheckExact(obj))) return 1; - #endif - } - else { - if (likely(PyObject_TypeCheck(obj, type))) return 1; - } - __Pyx_RaiseArgumentTypeInvalid(name, obj, type); - return 0; -} - -static CYTHON_INLINE int __Pyx_PyBytes_Equals(PyObject* s1, PyObject* s2, int equals) { -#if CYTHON_COMPILING_IN_PYPY - return PyObject_RichCompareBool(s1, s2, equals); -#else - if (s1 == s2) { - return (equals == Py_EQ); - } else if (PyBytes_CheckExact(s1) & PyBytes_CheckExact(s2)) { - const char *ps1, *ps2; - Py_ssize_t length = PyBytes_GET_SIZE(s1); - if (length != PyBytes_GET_SIZE(s2)) - return (equals == Py_NE); - ps1 = PyBytes_AS_STRING(s1); - ps2 = PyBytes_AS_STRING(s2); - if (ps1[0] != ps2[0]) { - return (equals == Py_NE); - } else if (length == 1) { - return (equals == Py_EQ); - } else { - int result = memcmp(ps1, ps2, (size_t)length); - return (equals == Py_EQ) ? (result == 0) : (result != 0); - } - } else if ((s1 == Py_None) & PyBytes_CheckExact(s2)) { - return (equals == Py_NE); - } else if ((s2 == Py_None) & PyBytes_CheckExact(s1)) { - return (equals == Py_NE); - } else { - int result; - PyObject* py_result = PyObject_RichCompare(s1, s2, equals); - if (!py_result) - return -1; - result = __Pyx_PyObject_IsTrue(py_result); - Py_DECREF(py_result); - return result; - } -#endif -} - -static CYTHON_INLINE int __Pyx_PyUnicode_Equals(PyObject* s1, PyObject* s2, int equals) { -#if CYTHON_COMPILING_IN_PYPY - return PyObject_RichCompareBool(s1, s2, equals); -#else -#if PY_MAJOR_VERSION < 3 - PyObject* owned_ref = NULL; -#endif - int s1_is_unicode, s2_is_unicode; - if (s1 == s2) { - goto return_eq; - } - s1_is_unicode = PyUnicode_CheckExact(s1); - s2_is_unicode = PyUnicode_CheckExact(s2); -#if PY_MAJOR_VERSION < 3 - if ((s1_is_unicode & (!s2_is_unicode)) && PyString_CheckExact(s2)) { - owned_ref = PyUnicode_FromObject(s2); - if (unlikely(!owned_ref)) - return -1; - s2 = owned_ref; - s2_is_unicode = 1; - } else if ((s2_is_unicode & (!s1_is_unicode)) && PyString_CheckExact(s1)) { - owned_ref = PyUnicode_FromObject(s1); - if (unlikely(!owned_ref)) - return -1; - s1 = owned_ref; - s1_is_unicode = 1; - } else if (((!s2_is_unicode) & (!s1_is_unicode))) { - return __Pyx_PyBytes_Equals(s1, s2, equals); - } -#endif - if (s1_is_unicode & s2_is_unicode) { - Py_ssize_t length; - int kind; - void *data1, *data2; - if (unlikely(__Pyx_PyUnicode_READY(s1) < 0) || unlikely(__Pyx_PyUnicode_READY(s2) < 0)) - return -1; - length = __Pyx_PyUnicode_GET_LENGTH(s1); - if (length != __Pyx_PyUnicode_GET_LENGTH(s2)) { - goto return_ne; - } - kind = __Pyx_PyUnicode_KIND(s1); - if (kind != __Pyx_PyUnicode_KIND(s2)) { - goto return_ne; - } - data1 = __Pyx_PyUnicode_DATA(s1); - data2 = __Pyx_PyUnicode_DATA(s2); - if (__Pyx_PyUnicode_READ(kind, data1, 0) != __Pyx_PyUnicode_READ(kind, data2, 0)) { - goto return_ne; - } else if (length == 1) { - goto return_eq; - } else { - int result = memcmp(data1, data2, (size_t)(length * kind)); - #if PY_MAJOR_VERSION < 3 - Py_XDECREF(owned_ref); - #endif - return (equals == Py_EQ) ? (result == 0) : (result != 0); - } - } else if ((s1 == Py_None) & s2_is_unicode) { - goto return_ne; - } else if ((s2 == Py_None) & s1_is_unicode) { - goto return_ne; - } else { - int result; - PyObject* py_result = PyObject_RichCompare(s1, s2, equals); - if (!py_result) - return -1; - result = __Pyx_PyObject_IsTrue(py_result); - Py_DECREF(py_result); - return result; - } -return_eq: - #if PY_MAJOR_VERSION < 3 - Py_XDECREF(owned_ref); - #endif - return (equals == Py_EQ); -return_ne: - #if PY_MAJOR_VERSION < 3 - Py_XDECREF(owned_ref); - #endif - return (equals == Py_NE); -#endif -} - -static CYTHON_INLINE Py_ssize_t __Pyx_div_Py_ssize_t(Py_ssize_t a, Py_ssize_t b) { - Py_ssize_t q = a / b; - Py_ssize_t r = a - q*b; - q -= ((r != 0) & ((r ^ b) < 0)); - return q; -} - -static CYTHON_INLINE PyObject *__Pyx_GetAttr(PyObject *o, PyObject *n) { -#if CYTHON_COMPILING_IN_CPYTHON -#if PY_MAJOR_VERSION >= 3 - if (likely(PyUnicode_Check(n))) -#else - if (likely(PyString_Check(n))) -#endif - return __Pyx_PyObject_GetAttrStr(o, n); -#endif - return PyObject_GetAttr(o, n); -} - -static CYTHON_INLINE PyObject* __Pyx_decode_c_string( - const char* cstring, Py_ssize_t start, Py_ssize_t stop, - const char* encoding, const char* errors, - PyObject* (*decode_func)(const char *s, Py_ssize_t size, const char *errors)) { - Py_ssize_t length; - if (unlikely((start < 0) | (stop < 0))) { - length = strlen(cstring); - if (start < 0) { - start += length; - if (start < 0) - start = 0; - } - if (stop < 0) - stop += length; - } - length = stop - start; - if (unlikely(length <= 0)) - return PyUnicode_FromUnicode(NULL, 0); - cstring += start; - if (decode_func) { - return decode_func(cstring, length, errors); - } else { - return PyUnicode_Decode(cstring, length, encoding, errors); - } -} - -static CYTHON_INLINE void __Pyx_ExceptionSave(PyObject **type, PyObject **value, PyObject **tb) { -#if CYTHON_COMPILING_IN_CPYTHON - PyThreadState *tstate = PyThreadState_GET(); - *type = tstate->exc_type; - *value = tstate->exc_value; - *tb = tstate->exc_traceback; - Py_XINCREF(*type); - Py_XINCREF(*value); - Py_XINCREF(*tb); -#else - PyErr_GetExcInfo(type, value, tb); -#endif -} -static void __Pyx_ExceptionReset(PyObject *type, PyObject *value, PyObject *tb) { -#if CYTHON_COMPILING_IN_CPYTHON - PyObject *tmp_type, *tmp_value, *tmp_tb; - PyThreadState *tstate = PyThreadState_GET(); - tmp_type = tstate->exc_type; - tmp_value = tstate->exc_value; - tmp_tb = tstate->exc_traceback; - tstate->exc_type = type; - tstate->exc_value = value; - tstate->exc_traceback = tb; - Py_XDECREF(tmp_type); - Py_XDECREF(tmp_value); - Py_XDECREF(tmp_tb); -#else - PyErr_SetExcInfo(type, value, tb); -#endif -} - -static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb) { - PyObject *local_type, *local_value, *local_tb; -#if CYTHON_COMPILING_IN_CPYTHON - PyObject *tmp_type, *tmp_value, *tmp_tb; - PyThreadState *tstate = PyThreadState_GET(); - local_type = tstate->curexc_type; - local_value = tstate->curexc_value; - local_tb = tstate->curexc_traceback; - tstate->curexc_type = 0; - tstate->curexc_value = 0; - tstate->curexc_traceback = 0; -#else - PyErr_Fetch(&local_type, &local_value, &local_tb); -#endif - PyErr_NormalizeException(&local_type, &local_value, &local_tb); -#if CYTHON_COMPILING_IN_CPYTHON - if (unlikely(tstate->curexc_type)) -#else - if (unlikely(PyErr_Occurred())) -#endif - goto bad; - #if PY_MAJOR_VERSION >= 3 - if (local_tb) { - if (unlikely(PyException_SetTraceback(local_value, local_tb) < 0)) - goto bad; - } - #endif - Py_XINCREF(local_tb); - Py_XINCREF(local_type); - Py_XINCREF(local_value); - *type = local_type; - *value = local_value; - *tb = local_tb; -#if CYTHON_COMPILING_IN_CPYTHON - tmp_type = tstate->exc_type; - tmp_value = tstate->exc_value; - tmp_tb = tstate->exc_traceback; - tstate->exc_type = local_type; - tstate->exc_value = local_value; - tstate->exc_traceback = local_tb; - Py_XDECREF(tmp_type); - Py_XDECREF(tmp_value); - Py_XDECREF(tmp_tb); -#else - PyErr_SetExcInfo(local_type, local_value, local_tb); -#endif - return 0; -bad: - *type = 0; - *value = 0; - *tb = 0; - Py_XDECREF(local_type); - Py_XDECREF(local_value); - Py_XDECREF(local_tb); - return -1; -} - -static CYTHON_INLINE void __Pyx_ExceptionSwap(PyObject **type, PyObject **value, PyObject **tb) { - PyObject *tmp_type, *tmp_value, *tmp_tb; -#if CYTHON_COMPILING_IN_CPYTHON - PyThreadState *tstate = PyThreadState_GET(); - tmp_type = tstate->exc_type; - tmp_value = tstate->exc_value; - tmp_tb = tstate->exc_traceback; - tstate->exc_type = *type; - tstate->exc_value = *value; - tstate->exc_traceback = *tb; -#else - PyErr_GetExcInfo(&tmp_type, &tmp_value, &tmp_tb); - PyErr_SetExcInfo(*type, *value, *tb); -#endif - *type = tmp_type; - *value = tmp_value; - *tb = tmp_tb; -} - -static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Generic(PyObject *o, PyObject* j) { - PyObject *r; - if (!j) return NULL; - r = PyObject_GetItem(o, j); - Py_DECREF(j); - return r; -} -static CYTHON_INLINE PyObject *__Pyx_GetItemInt_List_Fast(PyObject *o, Py_ssize_t i, - int wraparound, int boundscheck) { -#if CYTHON_COMPILING_IN_CPYTHON - if (wraparound & unlikely(i < 0)) i += PyList_GET_SIZE(o); - if ((!boundscheck) || likely((0 <= i) & (i < PyList_GET_SIZE(o)))) { - PyObject *r = PyList_GET_ITEM(o, i); - Py_INCREF(r); - return r; - } - return __Pyx_GetItemInt_Generic(o, PyInt_FromSsize_t(i)); -#else - return PySequence_GetItem(o, i); -#endif -} -static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Tuple_Fast(PyObject *o, Py_ssize_t i, - int wraparound, int boundscheck) { -#if CYTHON_COMPILING_IN_CPYTHON - if (wraparound & unlikely(i < 0)) i += PyTuple_GET_SIZE(o); - if ((!boundscheck) || likely((0 <= i) & (i < PyTuple_GET_SIZE(o)))) { - PyObject *r = PyTuple_GET_ITEM(o, i); - Py_INCREF(r); - return r; - } - return __Pyx_GetItemInt_Generic(o, PyInt_FromSsize_t(i)); -#else - return PySequence_GetItem(o, i); -#endif -} -static CYTHON_INLINE PyObject *__Pyx_GetItemInt_Fast(PyObject *o, Py_ssize_t i, - int is_list, int wraparound, int boundscheck) { -#if CYTHON_COMPILING_IN_CPYTHON - if (is_list || PyList_CheckExact(o)) { - Py_ssize_t n = ((!wraparound) | likely(i >= 0)) ? i : i + PyList_GET_SIZE(o); - if ((!boundscheck) || (likely((n >= 0) & (n < PyList_GET_SIZE(o))))) { - PyObject *r = PyList_GET_ITEM(o, n); - Py_INCREF(r); - return r; - } - } - else if (PyTuple_CheckExact(o)) { - Py_ssize_t n = ((!wraparound) | likely(i >= 0)) ? i : i + PyTuple_GET_SIZE(o); - if ((!boundscheck) || likely((n >= 0) & (n < PyTuple_GET_SIZE(o)))) { - PyObject *r = PyTuple_GET_ITEM(o, n); - Py_INCREF(r); - return r; - } - } else { - PySequenceMethods *m = Py_TYPE(o)->tp_as_sequence; - if (likely(m && m->sq_item)) { - if (wraparound && unlikely(i < 0) && likely(m->sq_length)) { - Py_ssize_t l = m->sq_length(o); - if (likely(l >= 0)) { - i += l; - } else { - if (PyErr_ExceptionMatches(PyExc_OverflowError)) - PyErr_Clear(); - else - return NULL; - } - } - return m->sq_item(o, i); - } - } -#else - if (is_list || PySequence_Check(o)) { - return PySequence_GetItem(o, i); - } -#endif - return __Pyx_GetItemInt_Generic(o, PyInt_FromSsize_t(i)); -} - -static CYTHON_INLINE void __Pyx_RaiseUnboundLocalError(const char *varname) { - PyErr_Format(PyExc_UnboundLocalError, "local variable '%s' referenced before assignment", varname); -} - -static int __Pyx_SetVtable(PyObject *dict, void *vtable) { -#if PY_VERSION_HEX >= 0x02070000 - PyObject *ob = PyCapsule_New(vtable, 0, 0); -#else - PyObject *ob = PyCObject_FromVoidPtr(vtable, 0); -#endif - if (!ob) - goto bad; - if (PyDict_SetItem(dict, __pyx_n_s_pyx_vtable, ob) < 0) - goto bad; - Py_DECREF(ob); - return 0; -bad: - Py_XDECREF(ob); - return -1; -} - -static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) { - int start = 0, mid = 0, end = count - 1; - if (end >= 0 && code_line > entries[end].code_line) { - return count; - } - while (start < end) { - mid = (start + end) / 2; - if (code_line < entries[mid].code_line) { - end = mid; - } else if (code_line > entries[mid].code_line) { - start = mid + 1; - } else { - return mid; - } - } - if (code_line <= entries[mid].code_line) { - return mid; - } else { - return mid + 1; - } -} -static PyCodeObject *__pyx_find_code_object(int code_line) { - PyCodeObject* code_object; - int pos; - if (unlikely(!code_line) || unlikely(!__pyx_code_cache.entries)) { - return NULL; - } - pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line); - if (unlikely(pos >= __pyx_code_cache.count) || unlikely(__pyx_code_cache.entries[pos].code_line != code_line)) { - return NULL; - } - code_object = __pyx_code_cache.entries[pos].code_object; - Py_INCREF(code_object); - return code_object; -} -static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) { - int pos, i; - __Pyx_CodeObjectCacheEntry* entries = __pyx_code_cache.entries; - if (unlikely(!code_line)) { - return; - } - if (unlikely(!entries)) { - entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Malloc(64*sizeof(__Pyx_CodeObjectCacheEntry)); - if (likely(entries)) { - __pyx_code_cache.entries = entries; - __pyx_code_cache.max_count = 64; - __pyx_code_cache.count = 1; - entries[0].code_line = code_line; - entries[0].code_object = code_object; - Py_INCREF(code_object); - } - return; - } - pos = __pyx_bisect_code_objects(__pyx_code_cache.entries, __pyx_code_cache.count, code_line); - if ((pos < __pyx_code_cache.count) && unlikely(__pyx_code_cache.entries[pos].code_line == code_line)) { - PyCodeObject* tmp = entries[pos].code_object; - entries[pos].code_object = code_object; - Py_DECREF(tmp); - return; - } - if (__pyx_code_cache.count == __pyx_code_cache.max_count) { - int new_max = __pyx_code_cache.max_count + 64; - entries = (__Pyx_CodeObjectCacheEntry*)PyMem_Realloc( - __pyx_code_cache.entries, (size_t)new_max*sizeof(__Pyx_CodeObjectCacheEntry)); - if (unlikely(!entries)) { - return; - } - __pyx_code_cache.entries = entries; - __pyx_code_cache.max_count = new_max; - } - for (i=__pyx_code_cache.count; i>pos; i--) { - entries[i] = entries[i-1]; - } - entries[pos].code_line = code_line; - entries[pos].code_object = code_object; - __pyx_code_cache.count++; - Py_INCREF(code_object); -} - -#include "compile.h" -#include "frameobject.h" -#include "traceback.h" -static PyCodeObject* __Pyx_CreateCodeObjectForTraceback( - const char *funcname, int c_line, - int py_line, const char *filename) { - PyCodeObject *py_code = 0; - PyObject *py_srcfile = 0; - PyObject *py_funcname = 0; - #if PY_MAJOR_VERSION < 3 - py_srcfile = PyString_FromString(filename); - #else - py_srcfile = PyUnicode_FromString(filename); - #endif - if (!py_srcfile) goto bad; - if (c_line) { - #if PY_MAJOR_VERSION < 3 - py_funcname = PyString_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line); - #else - py_funcname = PyUnicode_FromFormat( "%s (%s:%d)", funcname, __pyx_cfilenm, c_line); - #endif - } - else { - #if PY_MAJOR_VERSION < 3 - py_funcname = PyString_FromString(funcname); - #else - py_funcname = PyUnicode_FromString(funcname); - #endif - } - if (!py_funcname) goto bad; - py_code = __Pyx_PyCode_New( - 0, - 0, - 0, - 0, - 0, - __pyx_empty_bytes, /*PyObject *code,*/ - __pyx_empty_tuple, /*PyObject *consts,*/ - __pyx_empty_tuple, /*PyObject *names,*/ - __pyx_empty_tuple, /*PyObject *varnames,*/ - __pyx_empty_tuple, /*PyObject *freevars,*/ - __pyx_empty_tuple, /*PyObject *cellvars,*/ - py_srcfile, /*PyObject *filename,*/ - py_funcname, /*PyObject *name,*/ - py_line, - __pyx_empty_bytes /*PyObject *lnotab*/ - ); - Py_DECREF(py_srcfile); - Py_DECREF(py_funcname); - return py_code; -bad: - Py_XDECREF(py_srcfile); - Py_XDECREF(py_funcname); - return NULL; -} -static void __Pyx_AddTraceback(const char *funcname, int c_line, - int py_line, const char *filename) { - PyCodeObject *py_code = 0; - PyFrameObject *py_frame = 0; - py_code = __pyx_find_code_object(c_line ? c_line : py_line); - if (!py_code) { - py_code = __Pyx_CreateCodeObjectForTraceback( - funcname, c_line, py_line, filename); - if (!py_code) goto bad; - __pyx_insert_code_object(c_line ? c_line : py_line, py_code); - } - py_frame = PyFrame_New( - PyThreadState_GET(), /*PyThreadState *tstate,*/ - py_code, /*PyCodeObject *code,*/ - __pyx_d, /*PyObject *globals,*/ - 0 /*PyObject *locals*/ - ); - if (!py_frame) goto bad; - py_frame->f_lineno = py_line; - PyTraceBack_Here(py_frame); -bad: - Py_XDECREF(py_code); - Py_XDECREF(py_frame); -} - -#if PY_MAJOR_VERSION < 3 -static int __Pyx_GetBuffer(PyObject *obj, Py_buffer *view, int flags) { - if (PyObject_CheckBuffer(obj)) return PyObject_GetBuffer(obj, view, flags); - if (PyObject_TypeCheck(obj, __pyx_ptype_5numpy_ndarray)) return __pyx_pw_5numpy_7ndarray_1__getbuffer__(obj, view, flags); - if (PyObject_TypeCheck(obj, __pyx_array_type)) return __pyx_array_getbuffer(obj, view, flags); - if (PyObject_TypeCheck(obj, __pyx_memoryview_type)) return __pyx_memoryview_getbuffer(obj, view, flags); - PyErr_Format(PyExc_TypeError, "'%.200s' does not have the buffer interface", Py_TYPE(obj)->tp_name); - return -1; -} -static void __Pyx_ReleaseBuffer(Py_buffer *view) { - PyObject *obj = view->obj; - if (!obj) return; - if (PyObject_CheckBuffer(obj)) { - PyBuffer_Release(view); - return; - } - if (PyObject_TypeCheck(obj, __pyx_ptype_5numpy_ndarray)) { __pyx_pw_5numpy_7ndarray_3__releasebuffer__(obj, view); return; } - Py_DECREF(obj); - view->obj = NULL; -} -#endif - - - static PyObject *__Pyx_Import(PyObject *name, PyObject *from_list, int level) { - PyObject *empty_list = 0; - PyObject *module = 0; - PyObject *global_dict = 0; - PyObject *empty_dict = 0; - PyObject *list; - #if PY_VERSION_HEX < 0x03030000 - PyObject *py_import; - py_import = __Pyx_PyObject_GetAttrStr(__pyx_b, __pyx_n_s_import); - if (!py_import) - goto bad; - #endif - if (from_list) - list = from_list; - else { - empty_list = PyList_New(0); - if (!empty_list) - goto bad; - list = empty_list; - } - global_dict = PyModule_GetDict(__pyx_m); - if (!global_dict) - goto bad; - empty_dict = PyDict_New(); - if (!empty_dict) - goto bad; - { - #if PY_MAJOR_VERSION >= 3 - if (level == -1) { - if (strchr(__Pyx_MODULE_NAME, '.')) { - #if PY_VERSION_HEX < 0x03030000 - PyObject *py_level = PyInt_FromLong(1); - if (!py_level) - goto bad; - module = PyObject_CallFunctionObjArgs(py_import, - name, global_dict, empty_dict, list, py_level, NULL); - Py_DECREF(py_level); - #else - module = PyImport_ImportModuleLevelObject( - name, global_dict, empty_dict, list, 1); - #endif - if (!module) { - if (!PyErr_ExceptionMatches(PyExc_ImportError)) - goto bad; - PyErr_Clear(); - } - } - level = 0; - } - #endif - if (!module) { - #if PY_VERSION_HEX < 0x03030000 - PyObject *py_level = PyInt_FromLong(level); - if (!py_level) - goto bad; - module = PyObject_CallFunctionObjArgs(py_import, - name, global_dict, empty_dict, list, py_level, NULL); - Py_DECREF(py_level); - #else - module = PyImport_ImportModuleLevelObject( - name, global_dict, empty_dict, list, level); - #endif - } - } -bad: - #if PY_VERSION_HEX < 0x03030000 - Py_XDECREF(py_import); - #endif - Py_XDECREF(empty_list); - Py_XDECREF(empty_dict); - return module; -} - -static int +/* TypeInfoCompare */ + static int __pyx_typeinfo_cmp(__Pyx_TypeInfo *a, __Pyx_TypeInfo *b) { int i; @@ -19866,7 +24466,8 @@ __pyx_typeinfo_cmp(__Pyx_TypeInfo *a, __Pyx_TypeInfo *b) return 1; } -static int +/* MemviewSliceValidateAndInit */ + static int __pyx_check_strides(Py_buffer *buf, int dim, int ndim, int spec) { if (buf->shape[dim] <= 1) @@ -20047,7 +24648,8 @@ no_fail: return retval; } -static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_dsds_double(PyObject *obj) { +/* ObjectToMemviewSlice */ + static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_dsds_double(PyObject *obj, int writable_flag) { __Pyx_memviewslice result = { 0, 0, { 0 }, { 0 }, { 0 } }; __Pyx_BufFmt_StackElem stack[1]; int axes_specs[] = { (__Pyx_MEMVIEW_DIRECT | __Pyx_MEMVIEW_STRIDED), (__Pyx_MEMVIEW_DIRECT | __Pyx_MEMVIEW_STRIDED) }; @@ -20057,7 +24659,7 @@ static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_dsds_d return result; } retcode = __Pyx_ValidateAndInit_memviewslice(axes_specs, 0, - PyBUF_RECORDS, 2, + PyBUF_RECORDS_RO | writable_flag, 2, &__Pyx_TypeInfo_double, stack, &result, obj); if (unlikely(retcode == -1)) @@ -20069,123 +24671,30 @@ __pyx_fail: return result; } -#define __PYX_VERIFY_RETURN_INT(target_type, func_type, func_value) \ - { \ - func_type value = func_value; \ - if (sizeof(target_type) < sizeof(func_type)) { \ - if (unlikely(value != (func_type) (target_type) value)) { \ - func_type zero = 0; \ - if (is_unsigned && unlikely(value < zero)) \ - goto raise_neg_overflow; \ - else \ - goto raise_overflow; \ - } \ - } \ - return (target_type) value; \ +/* CIntFromPyVerify */ + #define __PYX_VERIFY_RETURN_INT(target_type, func_type, func_value)\ + __PYX__VERIFY_RETURN_INT(target_type, func_type, func_value, 0) +#define __PYX_VERIFY_RETURN_INT_EXC(target_type, func_type, func_value)\ + __PYX__VERIFY_RETURN_INT(target_type, func_type, func_value, 1) +#define __PYX__VERIFY_RETURN_INT(target_type, func_type, func_value, exc)\ + {\ + func_type value = func_value;\ + if (sizeof(target_type) < sizeof(func_type)) {\ + if (unlikely(value != (func_type) (target_type) value)) {\ + func_type zero = 0;\ + if (exc && unlikely(value == (func_type)-1 && PyErr_Occurred()))\ + return (target_type) -1;\ + if (is_unsigned && unlikely(value < zero))\ + goto raise_neg_overflow;\ + else\ + goto raise_overflow;\ + }\ + }\ + return (target_type) value;\ } -#if CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3 - #if CYTHON_USE_PYLONG_INTERNALS - #include "longintrepr.h" - #endif -#endif - -static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { - const int neg_one = (int) -1, const_zero = 0; - const int is_unsigned = neg_one > const_zero; -#if PY_MAJOR_VERSION < 3 - if (likely(PyInt_Check(x))) { - if (sizeof(int) < sizeof(long)) { - __PYX_VERIFY_RETURN_INT(int, long, PyInt_AS_LONG(x)) - } else { - long val = PyInt_AS_LONG(x); - if (is_unsigned && unlikely(val < 0)) { - goto raise_neg_overflow; - } - return (int) val; - } - } else -#endif - if (likely(PyLong_Check(x))) { - if (is_unsigned) { -#if CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3 - #if CYTHON_USE_PYLONG_INTERNALS - switch (Py_SIZE(x)) { - case 0: return 0; - case 1: __PYX_VERIFY_RETURN_INT(int, digit, ((PyLongObject*)x)->ob_digit[0]); - } - #endif -#endif - if (unlikely(Py_SIZE(x) < 0)) { - goto raise_neg_overflow; - } - if (sizeof(int) <= sizeof(unsigned long)) { - __PYX_VERIFY_RETURN_INT(int, unsigned long, PyLong_AsUnsignedLong(x)) - } else if (sizeof(int) <= sizeof(unsigned long long)) { - __PYX_VERIFY_RETURN_INT(int, unsigned long long, PyLong_AsUnsignedLongLong(x)) - } - } else { -#if CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3 - #if CYTHON_USE_PYLONG_INTERNALS - switch (Py_SIZE(x)) { - case 0: return 0; - case 1: __PYX_VERIFY_RETURN_INT(int, digit, +(((PyLongObject*)x)->ob_digit[0])); - case -1: __PYX_VERIFY_RETURN_INT(int, sdigit, -(sdigit) ((PyLongObject*)x)->ob_digit[0]); - } - #endif -#endif - if (sizeof(int) <= sizeof(long)) { - __PYX_VERIFY_RETURN_INT(int, long, PyLong_AsLong(x)) - } else if (sizeof(int) <= sizeof(long long)) { - __PYX_VERIFY_RETURN_INT(int, long long, PyLong_AsLongLong(x)) - } - } - { -#if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) - PyErr_SetString(PyExc_RuntimeError, - "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); -#else - int val; - PyObject *v = __Pyx_PyNumber_Int(x); - #if PY_MAJOR_VERSION < 3 - if (likely(v) && !PyLong_Check(v)) { - PyObject *tmp = v; - v = PyNumber_Long(tmp); - Py_DECREF(tmp); - } - #endif - if (likely(v)) { - int one = 1; int is_little = (int)*(unsigned char *)&one; - unsigned char *bytes = (unsigned char *)&val; - int ret = _PyLong_AsByteArray((PyLongObject *)v, - bytes, sizeof(val), - is_little, !is_unsigned); - Py_DECREF(v); - if (likely(!ret)) - return val; - } -#endif - return (int) -1; - } - } else { - int val; - PyObject *tmp = __Pyx_PyNumber_Int(x); - if (!tmp) return (int) -1; - val = __Pyx_PyInt_As_int(tmp); - Py_DECREF(tmp); - return val; - } -raise_overflow: - PyErr_SetString(PyExc_OverflowError, - "value too large to convert to int"); - return (int) -1; -raise_neg_overflow: - PyErr_SetString(PyExc_OverflowError, - "can't convert negative value to int"); - return (int) -1; -} - -static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_dsdsds_double(PyObject *obj) { +/* ObjectToMemviewSlice */ + static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_dsdsds_double(PyObject *obj, int writable_flag) { __Pyx_memviewslice result = { 0, 0, { 0 }, { 0 }, { 0 } }; __Pyx_BufFmt_StackElem stack[1]; int axes_specs[] = { (__Pyx_MEMVIEW_DIRECT | __Pyx_MEMVIEW_STRIDED), (__Pyx_MEMVIEW_DIRECT | __Pyx_MEMVIEW_STRIDED), (__Pyx_MEMVIEW_DIRECT | __Pyx_MEMVIEW_STRIDED) }; @@ -20195,7 +24704,7 @@ static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_dsdsds return result; } retcode = __Pyx_ValidateAndInit_memviewslice(axes_specs, 0, - PyBUF_RECORDS, 3, + PyBUF_RECORDS_RO | writable_flag, 3, &__Pyx_TypeInfo_double, stack, &result, obj); if (unlikely(retcode == -1)) @@ -20207,22 +24716,27 @@ __pyx_fail: return result; } -static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value) { - const int neg_one = (int) -1, const_zero = 0; +/* CIntToPy */ + static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value) { + const int neg_one = (int) ((int) 0 - (int) 1), const_zero = (int) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(int) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(int) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); - } else if (sizeof(int) <= sizeof(unsigned long long)) { - return PyLong_FromUnsignedLongLong((unsigned long long) value); +#ifdef HAVE_LONG_LONG + } else if (sizeof(int) <= sizeof(unsigned PY_LONG_LONG)) { + return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); +#endif } } else { if (sizeof(int) <= sizeof(long)) { return PyInt_FromLong((long) value); - } else if (sizeof(int) <= sizeof(long long)) { - return PyLong_FromLongLong((long long) value); +#ifdef HAVE_LONG_LONG + } else if (sizeof(int) <= sizeof(PY_LONG_LONG)) { + return PyLong_FromLongLong((PY_LONG_LONG) value); +#endif } } { @@ -20233,22 +24747,27 @@ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value) { } } -static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) { - const long neg_one = (long) -1, const_zero = 0; +/* CIntToPy */ + static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) { + const long neg_one = (long) ((long) 0 - (long) 1), const_zero = (long) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(long) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(long) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); - } else if (sizeof(long) <= sizeof(unsigned long long)) { - return PyLong_FromUnsignedLongLong((unsigned long long) value); +#ifdef HAVE_LONG_LONG + } else if (sizeof(long) <= sizeof(unsigned PY_LONG_LONG)) { + return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); +#endif } } else { if (sizeof(long) <= sizeof(long)) { return PyInt_FromLong((long) value); - } else if (sizeof(long) <= sizeof(long long)) { - return PyLong_FromLongLong((long long) value); +#ifdef HAVE_LONG_LONG + } else if (sizeof(long) <= sizeof(PY_LONG_LONG)) { + return PyLong_FromLongLong((PY_LONG_LONG) value); +#endif } } { @@ -20259,10 +24778,11 @@ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) { } } -static PyObject *__pyx_memview_get_double(const char *itemp) { +/* MemviewDtypeToObject */ + static CYTHON_INLINE PyObject *__pyx_memview_get_double(const char *itemp) { return (PyObject *) PyFloat_FromDouble(*(double *) itemp); } -static int __pyx_memview_set_double(const char *itemp, PyObject *obj) { +static CYTHON_INLINE int __pyx_memview_set_double(const char *itemp, PyObject *obj) { double value = __pyx_PyFloat_AsDouble(obj); if ((value == (double)-1) && PyErr_Occurred()) return 0; @@ -20270,7 +24790,8 @@ static int __pyx_memview_set_double(const char *itemp, PyObject *obj) { return 1; } -#if CYTHON_CCOMPLEX +/* Declarations */ + #if CYTHON_CCOMPLEX #ifdef __cplusplus static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) { return ::std::complex< float >(x, y); @@ -20289,60 +24810,86 @@ static int __pyx_memview_set_double(const char *itemp, PyObject *obj) { } #endif -#if CYTHON_CCOMPLEX +/* Arithmetic */ + #if CYTHON_CCOMPLEX #else - static CYTHON_INLINE int __Pyx_c_eqf(__pyx_t_float_complex a, __pyx_t_float_complex b) { + static CYTHON_INLINE int __Pyx_c_eq_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { return (a.real == b.real) && (a.imag == b.imag); } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sumf(__pyx_t_float_complex a, __pyx_t_float_complex b) { + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sum_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { __pyx_t_float_complex z; z.real = a.real + b.real; z.imag = a.imag + b.imag; return z; } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_difff(__pyx_t_float_complex a, __pyx_t_float_complex b) { + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_diff_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { __pyx_t_float_complex z; z.real = a.real - b.real; z.imag = a.imag - b.imag; return z; } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_prodf(__pyx_t_float_complex a, __pyx_t_float_complex b) { + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_prod_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { __pyx_t_float_complex z; z.real = a.real * b.real - a.imag * b.imag; z.imag = a.real * b.imag + a.imag * b.real; return z; } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quotf(__pyx_t_float_complex a, __pyx_t_float_complex b) { - __pyx_t_float_complex z; - float denom = b.real * b.real + b.imag * b.imag; - z.real = (a.real * b.real + a.imag * b.imag) / denom; - z.imag = (a.imag * b.real - a.real * b.imag) / denom; - return z; + #if 1 + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quot_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { + if (b.imag == 0) { + return __pyx_t_float_complex_from_parts(a.real / b.real, a.imag / b.real); + } else if (fabsf(b.real) >= fabsf(b.imag)) { + if (b.real == 0 && b.imag == 0) { + return __pyx_t_float_complex_from_parts(a.real / b.real, a.imag / b.imag); + } else { + float r = b.imag / b.real; + float s = 1.0 / (b.real + b.imag * r); + return __pyx_t_float_complex_from_parts( + (a.real + a.imag * r) * s, (a.imag - a.real * r) * s); + } + } else { + float r = b.real / b.imag; + float s = 1.0 / (b.imag + b.real * r); + return __pyx_t_float_complex_from_parts( + (a.real * r + a.imag) * s, (a.imag * r - a.real) * s); + } } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_negf(__pyx_t_float_complex a) { + #else + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quot_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { + if (b.imag == 0) { + return __pyx_t_float_complex_from_parts(a.real / b.real, a.imag / b.real); + } else { + float denom = b.real * b.real + b.imag * b.imag; + return __pyx_t_float_complex_from_parts( + (a.real * b.real + a.imag * b.imag) / denom, + (a.imag * b.real - a.real * b.imag) / denom); + } + } + #endif + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_neg_float(__pyx_t_float_complex a) { __pyx_t_float_complex z; z.real = -a.real; z.imag = -a.imag; return z; } - static CYTHON_INLINE int __Pyx_c_is_zerof(__pyx_t_float_complex a) { + static CYTHON_INLINE int __Pyx_c_is_zero_float(__pyx_t_float_complex a) { return (a.real == 0) && (a.imag == 0); } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conjf(__pyx_t_float_complex a) { + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conj_float(__pyx_t_float_complex a) { __pyx_t_float_complex z; z.real = a.real; z.imag = -a.imag; return z; } #if 1 - static CYTHON_INLINE float __Pyx_c_absf(__pyx_t_float_complex z) { + static CYTHON_INLINE float __Pyx_c_abs_float(__pyx_t_float_complex z) { #if !defined(HAVE_HYPOT) || defined(_MSC_VER) return sqrtf(z.real*z.real + z.imag*z.imag); #else return hypotf(z.real, z.imag); #endif } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_powf(__pyx_t_float_complex a, __pyx_t_float_complex b) { + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_pow_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { __pyx_t_float_complex z; float r, lnr, theta, z_r, z_theta; if (b.imag == 0 && b.real == (int)b.real) { @@ -20360,24 +24907,32 @@ static int __pyx_memview_set_double(const char *itemp, PyObject *obj) { case 1: return a; case 2: - z = __Pyx_c_prodf(a, a); - return __Pyx_c_prodf(a, a); + z = __Pyx_c_prod_float(a, a); + return __Pyx_c_prod_float(a, a); case 3: - z = __Pyx_c_prodf(a, a); - return __Pyx_c_prodf(z, a); + z = __Pyx_c_prod_float(a, a); + return __Pyx_c_prod_float(z, a); case 4: - z = __Pyx_c_prodf(a, a); - return __Pyx_c_prodf(z, z); + z = __Pyx_c_prod_float(a, a); + return __Pyx_c_prod_float(z, z); } } if (a.imag == 0) { if (a.real == 0) { return a; + } else if (b.imag == 0) { + z.real = powf(a.real, b.real); + z.imag = 0; + return z; + } else if (a.real > 0) { + r = a.real; + theta = 0; + } else { + r = -a.real; + theta = atan2f(0, -1); } - r = a.real; - theta = 0; } else { - r = __Pyx_c_absf(a); + r = __Pyx_c_abs_float(a); theta = atan2f(a.imag, a.real); } lnr = logf(r); @@ -20390,7 +24945,8 @@ static int __pyx_memview_set_double(const char *itemp, PyObject *obj) { #endif #endif -#if CYTHON_CCOMPLEX +/* Declarations */ + #if CYTHON_CCOMPLEX #ifdef __cplusplus static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) { return ::std::complex< double >(x, y); @@ -20409,60 +24965,86 @@ static int __pyx_memview_set_double(const char *itemp, PyObject *obj) { } #endif -#if CYTHON_CCOMPLEX +/* Arithmetic */ + #if CYTHON_CCOMPLEX #else - static CYTHON_INLINE int __Pyx_c_eq(__pyx_t_double_complex a, __pyx_t_double_complex b) { + static CYTHON_INLINE int __Pyx_c_eq_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { return (a.real == b.real) && (a.imag == b.imag); } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum(__pyx_t_double_complex a, __pyx_t_double_complex b) { + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { __pyx_t_double_complex z; z.real = a.real + b.real; z.imag = a.imag + b.imag; return z; } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff(__pyx_t_double_complex a, __pyx_t_double_complex b) { + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { __pyx_t_double_complex z; z.real = a.real - b.real; z.imag = a.imag - b.imag; return z; } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_prod(__pyx_t_double_complex a, __pyx_t_double_complex b) { + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_prod_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { __pyx_t_double_complex z; z.real = a.real * b.real - a.imag * b.imag; z.imag = a.real * b.imag + a.imag * b.real; return z; } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot(__pyx_t_double_complex a, __pyx_t_double_complex b) { - __pyx_t_double_complex z; - double denom = b.real * b.real + b.imag * b.imag; - z.real = (a.real * b.real + a.imag * b.imag) / denom; - z.imag = (a.imag * b.real - a.real * b.imag) / denom; - return z; + #if 1 + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { + if (b.imag == 0) { + return __pyx_t_double_complex_from_parts(a.real / b.real, a.imag / b.real); + } else if (fabs(b.real) >= fabs(b.imag)) { + if (b.real == 0 && b.imag == 0) { + return __pyx_t_double_complex_from_parts(a.real / b.real, a.imag / b.imag); + } else { + double r = b.imag / b.real; + double s = 1.0 / (b.real + b.imag * r); + return __pyx_t_double_complex_from_parts( + (a.real + a.imag * r) * s, (a.imag - a.real * r) * s); + } + } else { + double r = b.real / b.imag; + double s = 1.0 / (b.imag + b.real * r); + return __pyx_t_double_complex_from_parts( + (a.real * r + a.imag) * s, (a.imag * r - a.real) * s); + } } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg(__pyx_t_double_complex a) { + #else + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { + if (b.imag == 0) { + return __pyx_t_double_complex_from_parts(a.real / b.real, a.imag / b.real); + } else { + double denom = b.real * b.real + b.imag * b.imag; + return __pyx_t_double_complex_from_parts( + (a.real * b.real + a.imag * b.imag) / denom, + (a.imag * b.real - a.real * b.imag) / denom); + } + } + #endif + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg_double(__pyx_t_double_complex a) { __pyx_t_double_complex z; z.real = -a.real; z.imag = -a.imag; return z; } - static CYTHON_INLINE int __Pyx_c_is_zero(__pyx_t_double_complex a) { + static CYTHON_INLINE int __Pyx_c_is_zero_double(__pyx_t_double_complex a) { return (a.real == 0) && (a.imag == 0); } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj(__pyx_t_double_complex a) { + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj_double(__pyx_t_double_complex a) { __pyx_t_double_complex z; z.real = a.real; z.imag = -a.imag; return z; } #if 1 - static CYTHON_INLINE double __Pyx_c_abs(__pyx_t_double_complex z) { + static CYTHON_INLINE double __Pyx_c_abs_double(__pyx_t_double_complex z) { #if !defined(HAVE_HYPOT) || defined(_MSC_VER) return sqrt(z.real*z.real + z.imag*z.imag); #else return hypot(z.real, z.imag); #endif } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow(__pyx_t_double_complex a, __pyx_t_double_complex b) { + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { __pyx_t_double_complex z; double r, lnr, theta, z_r, z_theta; if (b.imag == 0 && b.real == (int)b.real) { @@ -20480,24 +25062,32 @@ static int __pyx_memview_set_double(const char *itemp, PyObject *obj) { case 1: return a; case 2: - z = __Pyx_c_prod(a, a); - return __Pyx_c_prod(a, a); + z = __Pyx_c_prod_double(a, a); + return __Pyx_c_prod_double(a, a); case 3: - z = __Pyx_c_prod(a, a); - return __Pyx_c_prod(z, a); + z = __Pyx_c_prod_double(a, a); + return __Pyx_c_prod_double(z, a); case 4: - z = __Pyx_c_prod(a, a); - return __Pyx_c_prod(z, z); + z = __Pyx_c_prod_double(a, a); + return __Pyx_c_prod_double(z, z); } } if (a.imag == 0) { if (a.real == 0) { return a; + } else if (b.imag == 0) { + z.real = pow(a.real, b.real); + z.imag = 0; + return z; + } else if (a.real > 0) { + r = a.real; + theta = 0; + } else { + r = -a.real; + theta = atan2(0, -1); } - r = a.real; - theta = 0; } else { - r = __Pyx_c_abs(a); + r = __Pyx_c_abs_double(a); theta = atan2(a.imag, a.real); } lnr = log(r); @@ -20510,64 +25100,39 @@ static int __pyx_memview_set_double(const char *itemp, PyObject *obj) { #endif #endif -static int -__pyx_memviewslice_is_contig(const __Pyx_memviewslice *mvs, - char order, int ndim) -{ - int i, index, step, start; - Py_ssize_t itemsize = mvs->memview->view.itemsize; - if (order == 'F') { - step = 1; - start = 0; +/* CIntToPy */ + static CYTHON_INLINE PyObject* __Pyx_PyInt_From_enum__NPY_TYPES(enum NPY_TYPES value) { + const enum NPY_TYPES neg_one = (enum NPY_TYPES) ((enum NPY_TYPES) 0 - (enum NPY_TYPES) 1), const_zero = (enum NPY_TYPES) 0; + const int is_unsigned = neg_one > const_zero; + if (is_unsigned) { + if (sizeof(enum NPY_TYPES) < sizeof(long)) { + return PyInt_FromLong((long) value); + } else if (sizeof(enum NPY_TYPES) <= sizeof(unsigned long)) { + return PyLong_FromUnsignedLong((unsigned long) value); +#ifdef HAVE_LONG_LONG + } else if (sizeof(enum NPY_TYPES) <= sizeof(unsigned PY_LONG_LONG)) { + return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); +#endif + } } else { - step = -1; - start = ndim - 1; - } - for (i = 0; i < ndim; i++) { - index = start + step * i; - if (mvs->suboffsets[index] >= 0 || mvs->strides[index] != itemsize) - return 0; - itemsize *= mvs->shape[index]; - } - return 1; -} - -static void -__pyx_get_array_memory_extents(__Pyx_memviewslice *slice, - void **out_start, void **out_end, - int ndim, size_t itemsize) -{ - char *start, *end; - int i; - start = end = slice->data; - for (i = 0; i < ndim; i++) { - Py_ssize_t stride = slice->strides[i]; - Py_ssize_t extent = slice->shape[i]; - if (extent == 0) { - *out_start = *out_end = start; - return; - } else { - if (stride > 0) - end += stride * (extent - 1); - else - start += stride * (extent - 1); + if (sizeof(enum NPY_TYPES) <= sizeof(long)) { + return PyInt_FromLong((long) value); +#ifdef HAVE_LONG_LONG + } else if (sizeof(enum NPY_TYPES) <= sizeof(PY_LONG_LONG)) { + return PyLong_FromLongLong((PY_LONG_LONG) value); +#endif } } - *out_start = start; - *out_end = end + itemsize; -} -static int -__pyx_slices_overlap(__Pyx_memviewslice *slice1, - __Pyx_memviewslice *slice2, - int ndim, size_t itemsize) -{ - void *start1, *end1, *start2, *end2; - __pyx_get_array_memory_extents(slice1, &start1, &end1, ndim, itemsize); - __pyx_get_array_memory_extents(slice2, &start2, &end2, ndim, itemsize); - return (start1 < end2) && (start2 < end1); + { + int one = 1; int little = (int)*(unsigned char *)&one; + unsigned char *bytes = (unsigned char *)&value; + return _PyLong_FromByteArray(bytes, sizeof(enum NPY_TYPES), + little, !is_unsigned); + } } -static __Pyx_memviewslice +/* MemviewSliceCopyTemplate */ + static __Pyx_memviewslice __pyx_memoryview_copy_new_contig(const __Pyx_memviewslice *from_mvs, const char *mode, int ndim, size_t sizeof_dtype, int contig_flag, @@ -20633,66 +25198,148 @@ no_fail: return new_mvs; } -static CYTHON_INLINE PyObject * -__pyx_capsule_create(void *p, CYTHON_UNUSED const char *sig) -{ - PyObject *cobj; -#if PY_VERSION_HEX >= 0x02070000 - cobj = PyCapsule_New(p, sig, NULL); -#else - cobj = PyCObject_FromVoidPtr(p, NULL); -#endif - return cobj; -} - -static CYTHON_INLINE char __Pyx_PyInt_As_char(PyObject *x) { - const char neg_one = (char) -1, const_zero = 0; +/* CIntFromPy */ + static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { + const int neg_one = (int) ((int) 0 - (int) 1), const_zero = (int) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { - if (sizeof(char) < sizeof(long)) { - __PYX_VERIFY_RETURN_INT(char, long, PyInt_AS_LONG(x)) + if (sizeof(int) < sizeof(long)) { + __PYX_VERIFY_RETURN_INT(int, long, PyInt_AS_LONG(x)) } else { long val = PyInt_AS_LONG(x); if (is_unsigned && unlikely(val < 0)) { goto raise_neg_overflow; } - return (char) val; + return (int) val; } } else #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { -#if CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3 - #if CYTHON_USE_PYLONG_INTERNALS +#if CYTHON_USE_PYLONG_INTERNALS + const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { - case 0: return 0; - case 1: __PYX_VERIFY_RETURN_INT(char, digit, ((PyLongObject*)x)->ob_digit[0]); + case 0: return (int) 0; + case 1: __PYX_VERIFY_RETURN_INT(int, digit, digits[0]) + case 2: + if (8 * sizeof(int) > 1 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) >= 2 * PyLong_SHIFT) { + return (int) (((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0])); + } + } + break; + case 3: + if (8 * sizeof(int) > 2 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) >= 3 * PyLong_SHIFT) { + return (int) (((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0])); + } + } + break; + case 4: + if (8 * sizeof(int) > 3 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) >= 4 * PyLong_SHIFT) { + return (int) (((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0])); + } + } + break; } - #endif #endif +#if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } - if (sizeof(char) <= sizeof(unsigned long)) { - __PYX_VERIFY_RETURN_INT(char, unsigned long, PyLong_AsUnsignedLong(x)) - } else if (sizeof(char) <= sizeof(unsigned long long)) { - __PYX_VERIFY_RETURN_INT(char, unsigned long long, PyLong_AsUnsignedLongLong(x)) +#else + { + int result = PyObject_RichCompareBool(x, Py_False, Py_LT); + if (unlikely(result < 0)) + return (int) -1; + if (unlikely(result == 1)) + goto raise_neg_overflow; + } +#endif + if (sizeof(int) <= sizeof(unsigned long)) { + __PYX_VERIFY_RETURN_INT_EXC(int, unsigned long, PyLong_AsUnsignedLong(x)) +#ifdef HAVE_LONG_LONG + } else if (sizeof(int) <= sizeof(unsigned PY_LONG_LONG)) { + __PYX_VERIFY_RETURN_INT_EXC(int, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) +#endif } } else { -#if CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3 - #if CYTHON_USE_PYLONG_INTERNALS +#if CYTHON_USE_PYLONG_INTERNALS + const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { - case 0: return 0; - case 1: __PYX_VERIFY_RETURN_INT(char, digit, +(((PyLongObject*)x)->ob_digit[0])); - case -1: __PYX_VERIFY_RETURN_INT(char, sdigit, -(sdigit) ((PyLongObject*)x)->ob_digit[0]); + case 0: return (int) 0; + case -1: __PYX_VERIFY_RETURN_INT(int, sdigit, (sdigit) (-(sdigit)digits[0])) + case 1: __PYX_VERIFY_RETURN_INT(int, digit, +digits[0]) + case -2: + if (8 * sizeof(int) - 1 > 1 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) - 1 > 2 * PyLong_SHIFT) { + return (int) (((int)-1)*(((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); + } + } + break; + case 2: + if (8 * sizeof(int) > 1 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) - 1 > 2 * PyLong_SHIFT) { + return (int) ((((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); + } + } + break; + case -3: + if (8 * sizeof(int) - 1 > 2 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) - 1 > 3 * PyLong_SHIFT) { + return (int) (((int)-1)*(((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); + } + } + break; + case 3: + if (8 * sizeof(int) > 2 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) - 1 > 3 * PyLong_SHIFT) { + return (int) ((((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); + } + } + break; + case -4: + if (8 * sizeof(int) - 1 > 3 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) - 1 > 4 * PyLong_SHIFT) { + return (int) (((int)-1)*(((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); + } + } + break; + case 4: + if (8 * sizeof(int) > 3 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(int) - 1 > 4 * PyLong_SHIFT) { + return (int) ((((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); + } + } + break; } - #endif #endif - if (sizeof(char) <= sizeof(long)) { - __PYX_VERIFY_RETURN_INT(char, long, PyLong_AsLong(x)) - } else if (sizeof(char) <= sizeof(long long)) { - __PYX_VERIFY_RETURN_INT(char, long long, PyLong_AsLongLong(x)) + if (sizeof(int) <= sizeof(long)) { + __PYX_VERIFY_RETURN_INT_EXC(int, long, PyLong_AsLong(x)) +#ifdef HAVE_LONG_LONG + } else if (sizeof(int) <= sizeof(PY_LONG_LONG)) { + __PYX_VERIFY_RETURN_INT_EXC(int, PY_LONG_LONG, PyLong_AsLongLong(x)) +#endif } } { @@ -20700,8 +25347,8 @@ static CYTHON_INLINE char __Pyx_PyInt_As_char(PyObject *x) { PyErr_SetString(PyExc_RuntimeError, "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else - char val; - PyObject *v = __Pyx_PyNumber_Int(x); + int val; + PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; @@ -20720,28 +25367,29 @@ static CYTHON_INLINE char __Pyx_PyInt_As_char(PyObject *x) { return val; } #endif - return (char) -1; + return (int) -1; } } else { - char val; - PyObject *tmp = __Pyx_PyNumber_Int(x); - if (!tmp) return (char) -1; - val = __Pyx_PyInt_As_char(tmp); + int val; + PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); + if (!tmp) return (int) -1; + val = __Pyx_PyInt_As_int(tmp); Py_DECREF(tmp); return val; } raise_overflow: PyErr_SetString(PyExc_OverflowError, - "value too large to convert to char"); - return (char) -1; + "value too large to convert to int"); + return (int) -1; raise_neg_overflow: PyErr_SetString(PyExc_OverflowError, - "can't convert negative value to char"); - return (char) -1; + "can't convert negative value to int"); + return (int) -1; } -static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { - const long neg_one = (long) -1, const_zero = 0; +/* CIntFromPy */ + static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { + const long neg_one = (long) ((long) 0 - (long) 1), const_zero = (long) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { @@ -20758,36 +25406,129 @@ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { #endif if (likely(PyLong_Check(x))) { if (is_unsigned) { -#if CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3 - #if CYTHON_USE_PYLONG_INTERNALS +#if CYTHON_USE_PYLONG_INTERNALS + const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { - case 0: return 0; - case 1: __PYX_VERIFY_RETURN_INT(long, digit, ((PyLongObject*)x)->ob_digit[0]); + case 0: return (long) 0; + case 1: __PYX_VERIFY_RETURN_INT(long, digit, digits[0]) + case 2: + if (8 * sizeof(long) > 1 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(long) >= 2 * PyLong_SHIFT) { + return (long) (((((long)digits[1]) << PyLong_SHIFT) | (long)digits[0])); + } + } + break; + case 3: + if (8 * sizeof(long) > 2 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(long) >= 3 * PyLong_SHIFT) { + return (long) (((((((long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0])); + } + } + break; + case 4: + if (8 * sizeof(long) > 3 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(long) >= 4 * PyLong_SHIFT) { + return (long) (((((((((long)digits[3]) << PyLong_SHIFT) | (long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0])); + } + } + break; } - #endif #endif +#if CYTHON_COMPILING_IN_CPYTHON if (unlikely(Py_SIZE(x) < 0)) { goto raise_neg_overflow; } +#else + { + int result = PyObject_RichCompareBool(x, Py_False, Py_LT); + if (unlikely(result < 0)) + return (long) -1; + if (unlikely(result == 1)) + goto raise_neg_overflow; + } +#endif if (sizeof(long) <= sizeof(unsigned long)) { - __PYX_VERIFY_RETURN_INT(long, unsigned long, PyLong_AsUnsignedLong(x)) - } else if (sizeof(long) <= sizeof(unsigned long long)) { - __PYX_VERIFY_RETURN_INT(long, unsigned long long, PyLong_AsUnsignedLongLong(x)) + __PYX_VERIFY_RETURN_INT_EXC(long, unsigned long, PyLong_AsUnsignedLong(x)) +#ifdef HAVE_LONG_LONG + } else if (sizeof(long) <= sizeof(unsigned PY_LONG_LONG)) { + __PYX_VERIFY_RETURN_INT_EXC(long, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) +#endif } } else { -#if CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3 - #if CYTHON_USE_PYLONG_INTERNALS +#if CYTHON_USE_PYLONG_INTERNALS + const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { - case 0: return 0; - case 1: __PYX_VERIFY_RETURN_INT(long, digit, +(((PyLongObject*)x)->ob_digit[0])); - case -1: __PYX_VERIFY_RETURN_INT(long, sdigit, -(sdigit) ((PyLongObject*)x)->ob_digit[0]); + case 0: return (long) 0; + case -1: __PYX_VERIFY_RETURN_INT(long, sdigit, (sdigit) (-(sdigit)digits[0])) + case 1: __PYX_VERIFY_RETURN_INT(long, digit, +digits[0]) + case -2: + if (8 * sizeof(long) - 1 > 1 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(long, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) { + return (long) (((long)-1)*(((((long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); + } + } + break; + case 2: + if (8 * sizeof(long) > 1 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) { + return (long) ((((((long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); + } + } + break; + case -3: + if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(long, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) { + return (long) (((long)-1)*(((((((long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); + } + } + break; + case 3: + if (8 * sizeof(long) > 2 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) { + return (long) ((((((((long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); + } + } + break; + case -4: + if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(long, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(long) - 1 > 4 * PyLong_SHIFT) { + return (long) (((long)-1)*(((((((((long)digits[3]) << PyLong_SHIFT) | (long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); + } + } + break; + case 4: + if (8 * sizeof(long) > 3 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(long) - 1 > 4 * PyLong_SHIFT) { + return (long) ((((((((((long)digits[3]) << PyLong_SHIFT) | (long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); + } + } + break; } - #endif #endif if (sizeof(long) <= sizeof(long)) { - __PYX_VERIFY_RETURN_INT(long, long, PyLong_AsLong(x)) - } else if (sizeof(long) <= sizeof(long long)) { - __PYX_VERIFY_RETURN_INT(long, long long, PyLong_AsLongLong(x)) + __PYX_VERIFY_RETURN_INT_EXC(long, long, PyLong_AsLong(x)) +#ifdef HAVE_LONG_LONG + } else if (sizeof(long) <= sizeof(PY_LONG_LONG)) { + __PYX_VERIFY_RETURN_INT_EXC(long, PY_LONG_LONG, PyLong_AsLongLong(x)) +#endif } } { @@ -20796,7 +25537,7 @@ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else long val; - PyObject *v = __Pyx_PyNumber_Int(x); + PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; @@ -20819,7 +25560,7 @@ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { } } else { long val; - PyObject *tmp = __Pyx_PyNumber_Int(x); + PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (long) -1; val = __Pyx_PyInt_As_long(tmp); Py_DECREF(tmp); @@ -20835,7 +25576,197 @@ raise_neg_overflow: return (long) -1; } -static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_d_d_dc_double(PyObject *obj) { +/* CIntFromPy */ + static CYTHON_INLINE char __Pyx_PyInt_As_char(PyObject *x) { + const char neg_one = (char) ((char) 0 - (char) 1), const_zero = (char) 0; + const int is_unsigned = neg_one > const_zero; +#if PY_MAJOR_VERSION < 3 + if (likely(PyInt_Check(x))) { + if (sizeof(char) < sizeof(long)) { + __PYX_VERIFY_RETURN_INT(char, long, PyInt_AS_LONG(x)) + } else { + long val = PyInt_AS_LONG(x); + if (is_unsigned && unlikely(val < 0)) { + goto raise_neg_overflow; + } + return (char) val; + } + } else +#endif + if (likely(PyLong_Check(x))) { + if (is_unsigned) { +#if CYTHON_USE_PYLONG_INTERNALS + const digit* digits = ((PyLongObject*)x)->ob_digit; + switch (Py_SIZE(x)) { + case 0: return (char) 0; + case 1: __PYX_VERIFY_RETURN_INT(char, digit, digits[0]) + case 2: + if (8 * sizeof(char) > 1 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(char, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(char) >= 2 * PyLong_SHIFT) { + return (char) (((((char)digits[1]) << PyLong_SHIFT) | (char)digits[0])); + } + } + break; + case 3: + if (8 * sizeof(char) > 2 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(char, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(char) >= 3 * PyLong_SHIFT) { + return (char) (((((((char)digits[2]) << PyLong_SHIFT) | (char)digits[1]) << PyLong_SHIFT) | (char)digits[0])); + } + } + break; + case 4: + if (8 * sizeof(char) > 3 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(char, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(char) >= 4 * PyLong_SHIFT) { + return (char) (((((((((char)digits[3]) << PyLong_SHIFT) | (char)digits[2]) << PyLong_SHIFT) | (char)digits[1]) << PyLong_SHIFT) | (char)digits[0])); + } + } + break; + } +#endif +#if CYTHON_COMPILING_IN_CPYTHON + if (unlikely(Py_SIZE(x) < 0)) { + goto raise_neg_overflow; + } +#else + { + int result = PyObject_RichCompareBool(x, Py_False, Py_LT); + if (unlikely(result < 0)) + return (char) -1; + if (unlikely(result == 1)) + goto raise_neg_overflow; + } +#endif + if (sizeof(char) <= sizeof(unsigned long)) { + __PYX_VERIFY_RETURN_INT_EXC(char, unsigned long, PyLong_AsUnsignedLong(x)) +#ifdef HAVE_LONG_LONG + } else if (sizeof(char) <= sizeof(unsigned PY_LONG_LONG)) { + __PYX_VERIFY_RETURN_INT_EXC(char, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) +#endif + } + } else { +#if CYTHON_USE_PYLONG_INTERNALS + const digit* digits = ((PyLongObject*)x)->ob_digit; + switch (Py_SIZE(x)) { + case 0: return (char) 0; + case -1: __PYX_VERIFY_RETURN_INT(char, sdigit, (sdigit) (-(sdigit)digits[0])) + case 1: __PYX_VERIFY_RETURN_INT(char, digit, +digits[0]) + case -2: + if (8 * sizeof(char) - 1 > 1 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(char, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(char) - 1 > 2 * PyLong_SHIFT) { + return (char) (((char)-1)*(((((char)digits[1]) << PyLong_SHIFT) | (char)digits[0]))); + } + } + break; + case 2: + if (8 * sizeof(char) > 1 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(char, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(char) - 1 > 2 * PyLong_SHIFT) { + return (char) ((((((char)digits[1]) << PyLong_SHIFT) | (char)digits[0]))); + } + } + break; + case -3: + if (8 * sizeof(char) - 1 > 2 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(char, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(char) - 1 > 3 * PyLong_SHIFT) { + return (char) (((char)-1)*(((((((char)digits[2]) << PyLong_SHIFT) | (char)digits[1]) << PyLong_SHIFT) | (char)digits[0]))); + } + } + break; + case 3: + if (8 * sizeof(char) > 2 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(char, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(char) - 1 > 3 * PyLong_SHIFT) { + return (char) ((((((((char)digits[2]) << PyLong_SHIFT) | (char)digits[1]) << PyLong_SHIFT) | (char)digits[0]))); + } + } + break; + case -4: + if (8 * sizeof(char) - 1 > 3 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(char, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(char) - 1 > 4 * PyLong_SHIFT) { + return (char) (((char)-1)*(((((((((char)digits[3]) << PyLong_SHIFT) | (char)digits[2]) << PyLong_SHIFT) | (char)digits[1]) << PyLong_SHIFT) | (char)digits[0]))); + } + } + break; + case 4: + if (8 * sizeof(char) > 3 * PyLong_SHIFT) { + if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { + __PYX_VERIFY_RETURN_INT(char, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) + } else if (8 * sizeof(char) - 1 > 4 * PyLong_SHIFT) { + return (char) ((((((((((char)digits[3]) << PyLong_SHIFT) | (char)digits[2]) << PyLong_SHIFT) | (char)digits[1]) << PyLong_SHIFT) | (char)digits[0]))); + } + } + break; + } +#endif + if (sizeof(char) <= sizeof(long)) { + __PYX_VERIFY_RETURN_INT_EXC(char, long, PyLong_AsLong(x)) +#ifdef HAVE_LONG_LONG + } else if (sizeof(char) <= sizeof(PY_LONG_LONG)) { + __PYX_VERIFY_RETURN_INT_EXC(char, PY_LONG_LONG, PyLong_AsLongLong(x)) +#endif + } + } + { +#if CYTHON_COMPILING_IN_PYPY && !defined(_PyLong_AsByteArray) + PyErr_SetString(PyExc_RuntimeError, + "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); +#else + char val; + PyObject *v = __Pyx_PyNumber_IntOrLong(x); + #if PY_MAJOR_VERSION < 3 + if (likely(v) && !PyLong_Check(v)) { + PyObject *tmp = v; + v = PyNumber_Long(tmp); + Py_DECREF(tmp); + } + #endif + if (likely(v)) { + int one = 1; int is_little = (int)*(unsigned char *)&one; + unsigned char *bytes = (unsigned char *)&val; + int ret = _PyLong_AsByteArray((PyLongObject *)v, + bytes, sizeof(val), + is_little, !is_unsigned); + Py_DECREF(v); + if (likely(!ret)) + return val; + } +#endif + return (char) -1; + } + } else { + char val; + PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); + if (!tmp) return (char) -1; + val = __Pyx_PyInt_As_char(tmp); + Py_DECREF(tmp); + return val; + } +raise_overflow: + PyErr_SetString(PyExc_OverflowError, + "value too large to convert to char"); + return (char) -1; +raise_neg_overflow: + PyErr_SetString(PyExc_OverflowError, + "can't convert negative value to char"); + return (char) -1; +} + +/* ObjectToMemviewSlice */ + static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_d_d_dc_double(PyObject *obj, int writable_flag) { __Pyx_memviewslice result = { 0, 0, { 0 }, { 0 }, { 0 } }; __Pyx_BufFmt_StackElem stack[1]; int axes_specs[] = { (__Pyx_MEMVIEW_DIRECT | __Pyx_MEMVIEW_FOLLOW), (__Pyx_MEMVIEW_DIRECT | __Pyx_MEMVIEW_FOLLOW), (__Pyx_MEMVIEW_DIRECT | __Pyx_MEMVIEW_CONTIG) }; @@ -20845,7 +25776,7 @@ static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_d_d_dc return result; } retcode = __Pyx_ValidateAndInit_memviewslice(axes_specs, __Pyx_IS_C_CONTIG, - (PyBUF_C_CONTIGUOUS | PyBUF_FORMAT | PyBUF_WRITABLE), 3, + (PyBUF_C_CONTIGUOUS | PyBUF_FORMAT) | writable_flag, 3, &__Pyx_TypeInfo_double, stack, &result, obj); if (unlikely(retcode == -1)) @@ -20857,7 +25788,8 @@ __pyx_fail: return result; } -static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_d_dc_double(PyObject *obj) { +/* ObjectToMemviewSlice */ + static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_d_dc_double(PyObject *obj, int writable_flag) { __Pyx_memviewslice result = { 0, 0, { 0 }, { 0 }, { 0 } }; __Pyx_BufFmt_StackElem stack[1]; int axes_specs[] = { (__Pyx_MEMVIEW_DIRECT | __Pyx_MEMVIEW_FOLLOW), (__Pyx_MEMVIEW_DIRECT | __Pyx_MEMVIEW_CONTIG) }; @@ -20867,7 +25799,7 @@ static CYTHON_INLINE __Pyx_memviewslice __Pyx_PyObject_to_MemoryviewSlice_d_dc_d return result; } retcode = __Pyx_ValidateAndInit_memviewslice(axes_specs, __Pyx_IS_C_CONTIG, - (PyBUF_C_CONTIGUOUS | PyBUF_FORMAT | PyBUF_WRITABLE), 2, + (PyBUF_C_CONTIGUOUS | PyBUF_FORMAT) | writable_flag, 2, &__Pyx_TypeInfo_double, stack, &result, obj); if (unlikely(retcode == -1)) @@ -20879,7 +25811,8 @@ __pyx_fail: return result; } -static int __Pyx_check_binary_version(void) { +/* CheckBinaryVersion */ + static int __Pyx_check_binary_version(void) { char ctversion[4], rtversion[4]; PyOS_snprintf(ctversion, 4, "%d.%d", PY_MAJOR_VERSION, PY_MINOR_VERSION); PyOS_snprintf(rtversion, 4, "%s", Py_GetVersion()); @@ -20894,88 +25827,8 @@ static int __Pyx_check_binary_version(void) { return 0; } -#ifndef __PYX_HAVE_RT_ImportModule -#define __PYX_HAVE_RT_ImportModule -static PyObject *__Pyx_ImportModule(const char *name) { - PyObject *py_name = 0; - PyObject *py_module = 0; - py_name = __Pyx_PyIdentifier_FromString(name); - if (!py_name) - goto bad; - py_module = PyImport_Import(py_name); - Py_DECREF(py_name); - return py_module; -bad: - Py_XDECREF(py_name); - return 0; -} -#endif - -#ifndef __PYX_HAVE_RT_ImportType -#define __PYX_HAVE_RT_ImportType -static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name, - size_t size, int strict) -{ - PyObject *py_module = 0; - PyObject *result = 0; - PyObject *py_name = 0; - char warning[200]; - Py_ssize_t basicsize; -#ifdef Py_LIMITED_API - PyObject *py_basicsize; -#endif - py_module = __Pyx_ImportModule(module_name); - if (!py_module) - goto bad; - py_name = __Pyx_PyIdentifier_FromString(class_name); - if (!py_name) - goto bad; - result = PyObject_GetAttr(py_module, py_name); - Py_DECREF(py_name); - py_name = 0; - Py_DECREF(py_module); - py_module = 0; - if (!result) - goto bad; - if (!PyType_Check(result)) { - PyErr_Format(PyExc_TypeError, - "%.200s.%.200s is not a type object", - module_name, class_name); - goto bad; - } -#ifndef Py_LIMITED_API - basicsize = ((PyTypeObject *)result)->tp_basicsize; -#else - py_basicsize = PyObject_GetAttrString(result, "__basicsize__"); - if (!py_basicsize) - goto bad; - basicsize = PyLong_AsSsize_t(py_basicsize); - Py_DECREF(py_basicsize); - py_basicsize = 0; - if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred()) - goto bad; -#endif - if (!strict && (size_t)basicsize > size) { - PyOS_snprintf(warning, sizeof(warning), - "%s.%s size changed, may indicate binary incompatibility", - module_name, class_name); - if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad; - } - else if ((size_t)basicsize != size) { - PyErr_Format(PyExc_ValueError, - "%.200s.%.200s has the wrong size, try recompiling", - module_name, class_name); - goto bad; - } - return (PyTypeObject *)result; -bad: - Py_XDECREF(py_module); - Py_XDECREF(result); - return NULL; -} -#endif - -#ifndef __PYX_HAVE_RT_ImportFunction +/* FunctionImport */ + #ifndef __PYX_HAVE_RT_ImportFunction #define __PYX_HAVE_RT_ImportFunction static int __Pyx_ImportFunction(PyObject *module, const char *funcname, void (**f)(void), const char *sig) { PyObject *d = 0; @@ -21028,7 +25881,8 @@ bad: } #endif -static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) { +/* InitStrings */ + static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) { while (t->p) { #if PY_MAJOR_VERSION < 3 if (t->is_unicode) { @@ -21053,6 +25907,8 @@ static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) { #endif if (!*t->p) return -1; + if (PyObject_Hash(*t->p) == -1) + return -1; ++t; } return 0; @@ -21061,53 +25917,60 @@ static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) { static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(const char* c_str) { return __Pyx_PyUnicode_FromStringAndSize(c_str, (Py_ssize_t)strlen(c_str)); } -static CYTHON_INLINE char* __Pyx_PyObject_AsString(PyObject* o) { +static CYTHON_INLINE const char* __Pyx_PyObject_AsString(PyObject* o) { Py_ssize_t ignore; return __Pyx_PyObject_AsStringAndSize(o, &ignore); } -static CYTHON_INLINE char* __Pyx_PyObject_AsStringAndSize(PyObject* o, Py_ssize_t *length) { +#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII || __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT +#if !CYTHON_PEP393_ENABLED +static const char* __Pyx_PyUnicode_AsStringAndSize(PyObject* o, Py_ssize_t *length) { + char* defenc_c; + PyObject* defenc = _PyUnicode_AsDefaultEncodedString(o, NULL); + if (!defenc) return NULL; + defenc_c = PyBytes_AS_STRING(defenc); +#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII + { + char* end = defenc_c + PyBytes_GET_SIZE(defenc); + char* c; + for (c = defenc_c; c < end; c++) { + if ((unsigned char) (*c) >= 128) { + PyUnicode_AsASCIIString(o); + return NULL; + } + } + } +#endif + *length = PyBytes_GET_SIZE(defenc); + return defenc_c; +} +#else +static CYTHON_INLINE const char* __Pyx_PyUnicode_AsStringAndSize(PyObject* o, Py_ssize_t *length) { + if (unlikely(__Pyx_PyUnicode_READY(o) == -1)) return NULL; +#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII + if (likely(PyUnicode_IS_ASCII(o))) { + *length = PyUnicode_GET_LENGTH(o); + return PyUnicode_AsUTF8(o); + } else { + PyUnicode_AsASCIIString(o); + return NULL; + } +#else + return PyUnicode_AsUTF8AndSize(o, length); +#endif +} +#endif +#endif +static CYTHON_INLINE const char* __Pyx_PyObject_AsStringAndSize(PyObject* o, Py_ssize_t *length) { #if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII || __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT if ( #if PY_MAJOR_VERSION < 3 && __PYX_DEFAULT_STRING_ENCODING_IS_ASCII __Pyx_sys_getdefaultencoding_not_ascii && #endif PyUnicode_Check(o)) { -#if PY_VERSION_HEX < 0x03030000 - char* defenc_c; - PyObject* defenc = _PyUnicode_AsDefaultEncodedString(o, NULL); - if (!defenc) return NULL; - defenc_c = PyBytes_AS_STRING(defenc); -#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII - { - char* end = defenc_c + PyBytes_GET_SIZE(defenc); - char* c; - for (c = defenc_c; c < end; c++) { - if ((unsigned char) (*c) >= 128) { - PyUnicode_AsASCIIString(o); - return NULL; - } - } - } -#endif - *length = PyBytes_GET_SIZE(defenc); - return defenc_c; -#else - if (__Pyx_PyUnicode_READY(o) == -1) return NULL; -#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII - if (PyUnicode_IS_ASCII(o)) { - *length = PyUnicode_GET_LENGTH(o); - return PyUnicode_AsUTF8(o); - } else { - PyUnicode_AsASCIIString(o); - return NULL; - } -#else - return PyUnicode_AsUTF8AndSize(o, length); -#endif -#endif + return __Pyx_PyUnicode_AsStringAndSize(o, length); } else #endif -#if !CYTHON_COMPILING_IN_PYPY +#if (!CYTHON_COMPILING_IN_PYPY) || (defined(PyByteArray_AS_STRING) && defined(PyByteArray_GET_SIZE)) if (PyByteArray_Check(o)) { *length = PyByteArray_GET_SIZE(o); return PyByteArray_AS_STRING(o); @@ -21128,43 +25991,74 @@ static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) { if (is_true | (x == Py_False) | (x == Py_None)) return is_true; else return PyObject_IsTrue(x); } -static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x) { +static CYTHON_INLINE int __Pyx_PyObject_IsTrueAndDecref(PyObject* x) { + int retval; + if (unlikely(!x)) return -1; + retval = __Pyx_PyObject_IsTrue(x); + Py_DECREF(x); + return retval; +} +static PyObject* __Pyx_PyNumber_IntOrLongWrongResultType(PyObject* result, const char* type_name) { +#if PY_MAJOR_VERSION >= 3 + if (PyLong_Check(result)) { + if (PyErr_WarnFormat(PyExc_DeprecationWarning, 1, + "__int__ returned non-int (type %.200s). " + "The ability to return an instance of a strict subclass of int " + "is deprecated, and may be removed in a future version of Python.", + Py_TYPE(result)->tp_name)) { + Py_DECREF(result); + return NULL; + } + return result; + } +#endif + PyErr_Format(PyExc_TypeError, + "__%.4s__ returned non-%.4s (type %.200s)", + type_name, type_name, Py_TYPE(result)->tp_name); + Py_DECREF(result); + return NULL; +} +static CYTHON_INLINE PyObject* __Pyx_PyNumber_IntOrLong(PyObject* x) { +#if CYTHON_USE_TYPE_SLOTS PyNumberMethods *m; +#endif const char *name = NULL; PyObject *res = NULL; #if PY_MAJOR_VERSION < 3 - if (PyInt_Check(x) || PyLong_Check(x)) + if (likely(PyInt_Check(x) || PyLong_Check(x))) #else - if (PyLong_Check(x)) + if (likely(PyLong_Check(x))) #endif - return Py_INCREF(x), x; + return __Pyx_NewRef(x); +#if CYTHON_USE_TYPE_SLOTS m = Py_TYPE(x)->tp_as_number; -#if PY_MAJOR_VERSION < 3 + #if PY_MAJOR_VERSION < 3 if (m && m->nb_int) { name = "int"; - res = PyNumber_Int(x); + res = m->nb_int(x); } else if (m && m->nb_long) { name = "long"; - res = PyNumber_Long(x); + res = m->nb_long(x); } -#else - if (m && m->nb_int) { + #else + if (likely(m && m->nb_int)) { name = "int"; - res = PyNumber_Long(x); + res = m->nb_int(x); + } + #endif +#else + if (!PyBytes_CheckExact(x) && !PyUnicode_CheckExact(x)) { + res = PyNumber_Int(x); } #endif - if (res) { + if (likely(res)) { #if PY_MAJOR_VERSION < 3 - if (!PyInt_Check(res) && !PyLong_Check(res)) { + if (unlikely(!PyInt_Check(res) && !PyLong_Check(res))) { #else - if (!PyLong_Check(res)) { + if (unlikely(!PyLong_CheckExact(res))) { #endif - PyErr_Format(PyExc_TypeError, - "__%.4s__ returned non-%.4s (type %.200s)", - name, name, Py_TYPE(res)->tp_name); - Py_DECREF(res); - return NULL; + return __Pyx_PyNumber_IntOrLongWrongResultType(res, name); } } else if (!PyErr_Occurred()) { @@ -21177,18 +26071,55 @@ static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) { Py_ssize_t ival; PyObject *x; #if PY_MAJOR_VERSION < 3 - if (likely(PyInt_CheckExact(b))) - return PyInt_AS_LONG(b); + if (likely(PyInt_CheckExact(b))) { + if (sizeof(Py_ssize_t) >= sizeof(long)) + return PyInt_AS_LONG(b); + else + return PyInt_AsSsize_t(b); + } #endif if (likely(PyLong_CheckExact(b))) { - #if CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3 - #if CYTHON_USE_PYLONG_INTERNALS - switch (Py_SIZE(b)) { - case -1: return -(sdigit)((PyLongObject*)b)->ob_digit[0]; - case 0: return 0; - case 1: return ((PyLongObject*)b)->ob_digit[0]; - } - #endif + #if CYTHON_USE_PYLONG_INTERNALS + const digit* digits = ((PyLongObject*)b)->ob_digit; + const Py_ssize_t size = Py_SIZE(b); + if (likely(__Pyx_sst_abs(size) <= 1)) { + ival = likely(size) ? digits[0] : 0; + if (size == -1) ival = -ival; + return ival; + } else { + switch (size) { + case 2: + if (8 * sizeof(Py_ssize_t) > 2 * PyLong_SHIFT) { + return (Py_ssize_t) (((((size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); + } + break; + case -2: + if (8 * sizeof(Py_ssize_t) > 2 * PyLong_SHIFT) { + return -(Py_ssize_t) (((((size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); + } + break; + case 3: + if (8 * sizeof(Py_ssize_t) > 3 * PyLong_SHIFT) { + return (Py_ssize_t) (((((((size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); + } + break; + case -3: + if (8 * sizeof(Py_ssize_t) > 3 * PyLong_SHIFT) { + return -(Py_ssize_t) (((((((size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); + } + break; + case 4: + if (8 * sizeof(Py_ssize_t) > 4 * PyLong_SHIFT) { + return (Py_ssize_t) (((((((((size_t)digits[3]) << PyLong_SHIFT) | (size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); + } + break; + case -4: + if (8 * sizeof(Py_ssize_t) > 4 * PyLong_SHIFT) { + return -(Py_ssize_t) (((((((((size_t)digits[3]) << PyLong_SHIFT) | (size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); + } + break; + } + } #endif return PyLong_AsSsize_t(b); } @@ -21198,6 +26129,9 @@ static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) { Py_DECREF(x); return ival; } +static CYTHON_INLINE PyObject * __Pyx_PyBool_FromLong(long b) { + return b ? __Pyx_NewRef(Py_True) : __Pyx_NewRef(Py_False); +} static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) { return PyInt_FromSize_t(ival); } diff --git a/GPy/util/choleskies_cython.pyx b/GPy/util/choleskies_cython.pyx index 081491d5..28809087 100644 --- a/GPy/util/choleskies_cython.pyx +++ b/GPy/util/choleskies_cython.pyx @@ -9,6 +9,8 @@ from cython.parallel import prange, parallel cimport numpy as np cimport scipy.linalg.cython_blas as cblas +np.import_array() + def flat_to_triang(double[:, :] flat, int M): """take a matrix N x D and return a D X M x M array where diff --git a/GPy/util/linalg_cython.c b/GPy/util/linalg_cython.c index 0c6097c2..d48e943a 100644 --- a/GPy/util/linalg_cython.c +++ b/GPy/util/linalg_cython.c @@ -1,16 +1,18 @@ -/* Generated by Cython 0.23 */ +/* Generated by Cython 0.29.2 */ #define PY_SSIZE_T_CLEAN #include "Python.h" #ifndef Py_PYTHON_H #error Python headers needed to compile C extensions, please install development version of Python. -#elif PY_VERSION_HEX < 0x02060000 || (0x03000000 <= PY_VERSION_HEX && PY_VERSION_HEX < 0x03020000) - #error Cython requires Python 2.6+ or Python 3.2+. +#elif PY_VERSION_HEX < 0x02060000 || (0x03000000 <= PY_VERSION_HEX && PY_VERSION_HEX < 0x03030000) + #error Cython requires Python 2.6+ or Python 3.3+. #else -#define CYTHON_ABI "0_23" +#define CYTHON_ABI "0_29_2" +#define CYTHON_HEX_VERSION 0x001D02F0 +#define CYTHON_FUTURE_DIVISION 0 #include #ifndef offsetof -#define offsetof(type, member) ( (size_t) & ((type*)0) -> member ) + #define offsetof(type, member) ( (size_t) & ((type*)0) -> member ) #endif #if !defined(WIN32) && !defined(MS_WINDOWS) #ifndef __stdcall @@ -29,6 +31,12 @@ #ifndef DL_EXPORT #define DL_EXPORT(t) t #endif +#define __PYX_COMMA , +#ifndef HAVE_LONG_LONG + #if PY_VERSION_HEX >= 0x02070000 + #define HAVE_LONG_LONG + #endif +#endif #ifndef PY_LONG_LONG #define PY_LONG_LONG LONG_LONG #endif @@ -36,17 +44,262 @@ #define Py_HUGE_VAL HUGE_VAL #endif #ifdef PYPY_VERSION -#define CYTHON_COMPILING_IN_PYPY 1 -#define CYTHON_COMPILING_IN_CPYTHON 0 + #define CYTHON_COMPILING_IN_PYPY 1 + #define CYTHON_COMPILING_IN_PYSTON 0 + #define CYTHON_COMPILING_IN_CPYTHON 0 + #undef CYTHON_USE_TYPE_SLOTS + #define CYTHON_USE_TYPE_SLOTS 0 + #undef CYTHON_USE_PYTYPE_LOOKUP + #define CYTHON_USE_PYTYPE_LOOKUP 0 + #if PY_VERSION_HEX < 0x03050000 + #undef CYTHON_USE_ASYNC_SLOTS + #define CYTHON_USE_ASYNC_SLOTS 0 + #elif !defined(CYTHON_USE_ASYNC_SLOTS) + #define CYTHON_USE_ASYNC_SLOTS 1 + #endif + #undef CYTHON_USE_PYLIST_INTERNALS + #define CYTHON_USE_PYLIST_INTERNALS 0 + #undef CYTHON_USE_UNICODE_INTERNALS + #define CYTHON_USE_UNICODE_INTERNALS 0 + #undef CYTHON_USE_UNICODE_WRITER + #define CYTHON_USE_UNICODE_WRITER 0 + #undef CYTHON_USE_PYLONG_INTERNALS + #define CYTHON_USE_PYLONG_INTERNALS 0 + #undef CYTHON_AVOID_BORROWED_REFS + #define CYTHON_AVOID_BORROWED_REFS 1 + #undef CYTHON_ASSUME_SAFE_MACROS + #define CYTHON_ASSUME_SAFE_MACROS 0 + #undef CYTHON_UNPACK_METHODS + #define CYTHON_UNPACK_METHODS 0 + #undef CYTHON_FAST_THREAD_STATE + #define CYTHON_FAST_THREAD_STATE 0 + #undef CYTHON_FAST_PYCALL + #define CYTHON_FAST_PYCALL 0 + #undef CYTHON_PEP489_MULTI_PHASE_INIT + #define CYTHON_PEP489_MULTI_PHASE_INIT 0 + #undef CYTHON_USE_TP_FINALIZE + #define CYTHON_USE_TP_FINALIZE 0 + #undef CYTHON_USE_DICT_VERSIONS + #define CYTHON_USE_DICT_VERSIONS 0 + #undef CYTHON_USE_EXC_INFO_STACK + #define CYTHON_USE_EXC_INFO_STACK 0 +#elif defined(PYSTON_VERSION) + #define CYTHON_COMPILING_IN_PYPY 0 + #define CYTHON_COMPILING_IN_PYSTON 1 + #define CYTHON_COMPILING_IN_CPYTHON 0 + #ifndef CYTHON_USE_TYPE_SLOTS + #define CYTHON_USE_TYPE_SLOTS 1 + #endif + #undef CYTHON_USE_PYTYPE_LOOKUP + #define CYTHON_USE_PYTYPE_LOOKUP 0 + #undef CYTHON_USE_ASYNC_SLOTS + #define CYTHON_USE_ASYNC_SLOTS 0 + #undef CYTHON_USE_PYLIST_INTERNALS + #define CYTHON_USE_PYLIST_INTERNALS 0 + #ifndef CYTHON_USE_UNICODE_INTERNALS + #define CYTHON_USE_UNICODE_INTERNALS 1 + #endif + #undef CYTHON_USE_UNICODE_WRITER + #define CYTHON_USE_UNICODE_WRITER 0 + #undef CYTHON_USE_PYLONG_INTERNALS + #define CYTHON_USE_PYLONG_INTERNALS 0 + #ifndef CYTHON_AVOID_BORROWED_REFS + #define CYTHON_AVOID_BORROWED_REFS 0 + #endif + #ifndef CYTHON_ASSUME_SAFE_MACROS + #define CYTHON_ASSUME_SAFE_MACROS 1 + #endif + #ifndef CYTHON_UNPACK_METHODS + #define CYTHON_UNPACK_METHODS 1 + #endif + #undef CYTHON_FAST_THREAD_STATE + #define CYTHON_FAST_THREAD_STATE 0 + #undef CYTHON_FAST_PYCALL + #define CYTHON_FAST_PYCALL 0 + #undef CYTHON_PEP489_MULTI_PHASE_INIT + #define CYTHON_PEP489_MULTI_PHASE_INIT 0 + #undef CYTHON_USE_TP_FINALIZE + #define CYTHON_USE_TP_FINALIZE 0 + #undef CYTHON_USE_DICT_VERSIONS + #define CYTHON_USE_DICT_VERSIONS 0 + #undef CYTHON_USE_EXC_INFO_STACK + #define CYTHON_USE_EXC_INFO_STACK 0 #else -#define CYTHON_COMPILING_IN_PYPY 0 -#define CYTHON_COMPILING_IN_CPYTHON 1 + #define CYTHON_COMPILING_IN_PYPY 0 + #define CYTHON_COMPILING_IN_PYSTON 0 + #define CYTHON_COMPILING_IN_CPYTHON 1 + #ifndef CYTHON_USE_TYPE_SLOTS + #define CYTHON_USE_TYPE_SLOTS 1 + #endif + #if PY_VERSION_HEX < 0x02070000 + #undef CYTHON_USE_PYTYPE_LOOKUP + #define CYTHON_USE_PYTYPE_LOOKUP 0 + #elif !defined(CYTHON_USE_PYTYPE_LOOKUP) + #define CYTHON_USE_PYTYPE_LOOKUP 1 + #endif + #if PY_MAJOR_VERSION < 3 + #undef CYTHON_USE_ASYNC_SLOTS + #define CYTHON_USE_ASYNC_SLOTS 0 + #elif !defined(CYTHON_USE_ASYNC_SLOTS) + #define CYTHON_USE_ASYNC_SLOTS 1 + #endif + #if PY_VERSION_HEX < 0x02070000 + #undef CYTHON_USE_PYLONG_INTERNALS + #define CYTHON_USE_PYLONG_INTERNALS 0 + #elif !defined(CYTHON_USE_PYLONG_INTERNALS) + #define CYTHON_USE_PYLONG_INTERNALS 1 + #endif + #ifndef CYTHON_USE_PYLIST_INTERNALS + #define CYTHON_USE_PYLIST_INTERNALS 1 + #endif + #ifndef CYTHON_USE_UNICODE_INTERNALS + #define CYTHON_USE_UNICODE_INTERNALS 1 + #endif + #if PY_VERSION_HEX < 0x030300F0 + #undef CYTHON_USE_UNICODE_WRITER + #define CYTHON_USE_UNICODE_WRITER 0 + #elif !defined(CYTHON_USE_UNICODE_WRITER) + #define CYTHON_USE_UNICODE_WRITER 1 + #endif + #ifndef CYTHON_AVOID_BORROWED_REFS + #define CYTHON_AVOID_BORROWED_REFS 0 + #endif + #ifndef CYTHON_ASSUME_SAFE_MACROS + #define CYTHON_ASSUME_SAFE_MACROS 1 + #endif + #ifndef CYTHON_UNPACK_METHODS + #define CYTHON_UNPACK_METHODS 1 + #endif + #ifndef CYTHON_FAST_THREAD_STATE + #define CYTHON_FAST_THREAD_STATE 1 + #endif + #ifndef CYTHON_FAST_PYCALL + #define CYTHON_FAST_PYCALL 1 + #endif + #ifndef CYTHON_PEP489_MULTI_PHASE_INIT + #define CYTHON_PEP489_MULTI_PHASE_INIT (PY_VERSION_HEX >= 0x03050000) + #endif + #ifndef CYTHON_USE_TP_FINALIZE + #define CYTHON_USE_TP_FINALIZE (PY_VERSION_HEX >= 0x030400a1) + #endif + #ifndef CYTHON_USE_DICT_VERSIONS + #define CYTHON_USE_DICT_VERSIONS (PY_VERSION_HEX >= 0x030600B1) + #endif + #ifndef CYTHON_USE_EXC_INFO_STACK + #define CYTHON_USE_EXC_INFO_STACK (PY_VERSION_HEX >= 0x030700A3) + #endif #endif -#if !defined(CYTHON_USE_PYLONG_INTERNALS) && CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX >= 0x02070000 -#define CYTHON_USE_PYLONG_INTERNALS 1 +#if !defined(CYTHON_FAST_PYCCALL) +#define CYTHON_FAST_PYCCALL (CYTHON_FAST_PYCALL && PY_VERSION_HEX >= 0x030600B1) #endif +#if CYTHON_USE_PYLONG_INTERNALS + #include "longintrepr.h" + #undef SHIFT + #undef BASE + #undef MASK + #ifdef SIZEOF_VOID_P + enum { __pyx_check_sizeof_voidp = 1 / (int)(SIZEOF_VOID_P == sizeof(void*)) }; + #endif +#endif +#ifndef __has_attribute + #define __has_attribute(x) 0 +#endif +#ifndef __has_cpp_attribute + #define __has_cpp_attribute(x) 0 +#endif +#ifndef CYTHON_RESTRICT + #if defined(__GNUC__) + #define CYTHON_RESTRICT __restrict__ + #elif defined(_MSC_VER) && _MSC_VER >= 1400 + #define CYTHON_RESTRICT __restrict + #elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L + #define CYTHON_RESTRICT restrict + #else + #define CYTHON_RESTRICT + #endif +#endif +#ifndef CYTHON_UNUSED +# if defined(__GNUC__) +# if !(defined(__cplusplus)) || (__GNUC__ > 3 || (__GNUC__ == 3 && __GNUC_MINOR__ >= 4)) +# define CYTHON_UNUSED __attribute__ ((__unused__)) +# else +# define CYTHON_UNUSED +# endif +# elif defined(__ICC) || (defined(__INTEL_COMPILER) && !defined(_MSC_VER)) +# define CYTHON_UNUSED __attribute__ ((__unused__)) +# else +# define CYTHON_UNUSED +# endif +#endif +#ifndef CYTHON_MAYBE_UNUSED_VAR +# if defined(__cplusplus) + template void CYTHON_MAYBE_UNUSED_VAR( const T& ) { } +# else +# define CYTHON_MAYBE_UNUSED_VAR(x) (void)(x) +# endif +#endif +#ifndef CYTHON_NCP_UNUSED +# if CYTHON_COMPILING_IN_CPYTHON +# define CYTHON_NCP_UNUSED +# else +# define CYTHON_NCP_UNUSED CYTHON_UNUSED +# endif +#endif +#define __Pyx_void_to_None(void_result) ((void)(void_result), Py_INCREF(Py_None), Py_None) +#ifdef _MSC_VER + #ifndef _MSC_STDINT_H_ + #if _MSC_VER < 1300 + typedef unsigned char uint8_t; + typedef unsigned int uint32_t; + #else + typedef unsigned __int8 uint8_t; + typedef unsigned __int32 uint32_t; + #endif + #endif +#else + #include +#endif +#ifndef CYTHON_FALLTHROUGH + #if defined(__cplusplus) && __cplusplus >= 201103L + #if __has_cpp_attribute(fallthrough) + #define CYTHON_FALLTHROUGH [[fallthrough]] + #elif __has_cpp_attribute(clang::fallthrough) + #define CYTHON_FALLTHROUGH [[clang::fallthrough]] + #elif __has_cpp_attribute(gnu::fallthrough) + #define CYTHON_FALLTHROUGH [[gnu::fallthrough]] + #endif + #endif + #ifndef CYTHON_FALLTHROUGH + #if __has_attribute(fallthrough) + #define CYTHON_FALLTHROUGH __attribute__((fallthrough)) + #else + #define CYTHON_FALLTHROUGH + #endif + #endif + #if defined(__clang__ ) && defined(__apple_build_version__) + #if __apple_build_version__ < 7000000 + #undef CYTHON_FALLTHROUGH + #define CYTHON_FALLTHROUGH + #endif + #endif +#endif + +#ifndef CYTHON_INLINE + #if defined(__clang__) + #define CYTHON_INLINE __inline__ __attribute__ ((__unused__)) + #elif defined(__GNUC__) + #define CYTHON_INLINE __inline__ + #elif defined(_MSC_VER) + #define CYTHON_INLINE __inline + #elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L + #define CYTHON_INLINE inline + #else + #define CYTHON_INLINE + #endif +#endif + #if CYTHON_COMPILING_IN_PYPY && PY_VERSION_HEX < 0x02070600 && !defined(Py_OptimizeFlag) -#define Py_OptimizeFlag 0 + #define Py_OptimizeFlag 0 #endif #define __PYX_BUILD_PY_SSIZE_T "n" #define CYTHON_FORMAT_SSIZE_T "z" @@ -73,23 +326,145 @@ #ifndef Py_TPFLAGS_HAVE_FINALIZE #define Py_TPFLAGS_HAVE_FINALIZE 0 #endif +#ifndef METH_STACKLESS + #define METH_STACKLESS 0 +#endif +#if PY_VERSION_HEX <= 0x030700A3 || !defined(METH_FASTCALL) + #ifndef METH_FASTCALL + #define METH_FASTCALL 0x80 + #endif + typedef PyObject *(*__Pyx_PyCFunctionFast) (PyObject *self, PyObject *const *args, Py_ssize_t nargs); + typedef PyObject *(*__Pyx_PyCFunctionFastWithKeywords) (PyObject *self, PyObject *const *args, + Py_ssize_t nargs, PyObject *kwnames); +#else + #define __Pyx_PyCFunctionFast _PyCFunctionFast + #define __Pyx_PyCFunctionFastWithKeywords _PyCFunctionFastWithKeywords +#endif +#if CYTHON_FAST_PYCCALL +#define __Pyx_PyFastCFunction_Check(func)\ + ((PyCFunction_Check(func) && (METH_FASTCALL == (PyCFunction_GET_FLAGS(func) & ~(METH_CLASS | METH_STATIC | METH_COEXIST | METH_KEYWORDS | METH_STACKLESS))))) +#else +#define __Pyx_PyFastCFunction_Check(func) 0 +#endif +#if CYTHON_USE_DICT_VERSIONS +#define __PYX_GET_DICT_VERSION(dict) (((PyDictObject*)(dict))->ma_version_tag) +#define __PYX_UPDATE_DICT_CACHE(dict, value, cache_var, version_var)\ + (version_var) = __PYX_GET_DICT_VERSION(dict);\ + (cache_var) = (value); +#define __PYX_PY_DICT_LOOKUP_IF_MODIFIED(VAR, DICT, LOOKUP) {\ + static PY_UINT64_T __pyx_dict_version = 0;\ + static PyObject *__pyx_dict_cached_value = NULL;\ + if (likely(__PYX_GET_DICT_VERSION(DICT) == __pyx_dict_version)) {\ + (VAR) = __pyx_dict_cached_value;\ + } else {\ + (VAR) = __pyx_dict_cached_value = (LOOKUP);\ + __pyx_dict_version = __PYX_GET_DICT_VERSION(DICT);\ + }\ + } +#else +#define __PYX_GET_DICT_VERSION(dict) (0) +#define __PYX_UPDATE_DICT_CACHE(dict, value, cache_var, version_var) +#define __PYX_PY_DICT_LOOKUP_IF_MODIFIED(VAR, DICT, LOOKUP) (VAR) = (LOOKUP); +#endif +#if CYTHON_COMPILING_IN_PYPY && !defined(PyObject_Malloc) + #define PyObject_Malloc(s) PyMem_Malloc(s) + #define PyObject_Free(p) PyMem_Free(p) + #define PyObject_Realloc(p) PyMem_Realloc(p) +#endif +#if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX < 0x030400A1 + #define PyMem_RawMalloc(n) PyMem_Malloc(n) + #define PyMem_RawRealloc(p, n) PyMem_Realloc(p, n) + #define PyMem_RawFree(p) PyMem_Free(p) +#endif +#if CYTHON_COMPILING_IN_PYSTON + #define __Pyx_PyCode_HasFreeVars(co) PyCode_HasFreeVars(co) + #define __Pyx_PyFrame_SetLineNumber(frame, lineno) PyFrame_SetLineNumber(frame, lineno) +#else + #define __Pyx_PyCode_HasFreeVars(co) (PyCode_GetNumFree(co) > 0) + #define __Pyx_PyFrame_SetLineNumber(frame, lineno) (frame)->f_lineno = (lineno) +#endif +#if !CYTHON_FAST_THREAD_STATE || PY_VERSION_HEX < 0x02070000 + #define __Pyx_PyThreadState_Current PyThreadState_GET() +#elif PY_VERSION_HEX >= 0x03060000 + #define __Pyx_PyThreadState_Current _PyThreadState_UncheckedGet() +#elif PY_VERSION_HEX >= 0x03000000 + #define __Pyx_PyThreadState_Current PyThreadState_GET() +#else + #define __Pyx_PyThreadState_Current _PyThreadState_Current +#endif +#if PY_VERSION_HEX < 0x030700A2 && !defined(PyThread_tss_create) && !defined(Py_tss_NEEDS_INIT) +#include "pythread.h" +#define Py_tss_NEEDS_INIT 0 +typedef int Py_tss_t; +static CYTHON_INLINE int PyThread_tss_create(Py_tss_t *key) { + *key = PyThread_create_key(); + return 0; // PyThread_create_key reports success always +} +static CYTHON_INLINE Py_tss_t * PyThread_tss_alloc(void) { + Py_tss_t *key = (Py_tss_t *)PyObject_Malloc(sizeof(Py_tss_t)); + *key = Py_tss_NEEDS_INIT; + return key; +} +static CYTHON_INLINE void PyThread_tss_free(Py_tss_t *key) { + PyObject_Free(key); +} +static CYTHON_INLINE int PyThread_tss_is_created(Py_tss_t *key) { + return *key != Py_tss_NEEDS_INIT; +} +static CYTHON_INLINE void PyThread_tss_delete(Py_tss_t *key) { + PyThread_delete_key(*key); + *key = Py_tss_NEEDS_INIT; +} +static CYTHON_INLINE int PyThread_tss_set(Py_tss_t *key, void *value) { + return PyThread_set_key_value(*key, value); +} +static CYTHON_INLINE void * PyThread_tss_get(Py_tss_t *key) { + return PyThread_get_key_value(*key); +} +#endif // TSS (Thread Specific Storage) API +#if CYTHON_COMPILING_IN_CPYTHON || defined(_PyDict_NewPresized) +#define __Pyx_PyDict_NewPresized(n) ((n <= 8) ? PyDict_New() : _PyDict_NewPresized(n)) +#else +#define __Pyx_PyDict_NewPresized(n) PyDict_New() +#endif +#if PY_MAJOR_VERSION >= 3 || CYTHON_FUTURE_DIVISION + #define __Pyx_PyNumber_Divide(x,y) PyNumber_TrueDivide(x,y) + #define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceTrueDivide(x,y) +#else + #define __Pyx_PyNumber_Divide(x,y) PyNumber_Divide(x,y) + #define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceDivide(x,y) +#endif +#if CYTHON_COMPILING_IN_CPYTHON && PY_VERSION_HEX >= 0x030500A1 && CYTHON_USE_UNICODE_INTERNALS +#define __Pyx_PyDict_GetItemStr(dict, name) _PyDict_GetItem_KnownHash(dict, name, ((PyASCIIObject *) name)->hash) +#else +#define __Pyx_PyDict_GetItemStr(dict, name) PyDict_GetItem(dict, name) +#endif #if PY_VERSION_HEX > 0x03030000 && defined(PyUnicode_KIND) #define CYTHON_PEP393_ENABLED 1 #define __Pyx_PyUnicode_READY(op) (likely(PyUnicode_IS_READY(op)) ?\ 0 : _PyUnicode_Ready((PyObject *)(op))) #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_LENGTH(u) #define __Pyx_PyUnicode_READ_CHAR(u, i) PyUnicode_READ_CHAR(u, i) + #define __Pyx_PyUnicode_MAX_CHAR_VALUE(u) PyUnicode_MAX_CHAR_VALUE(u) #define __Pyx_PyUnicode_KIND(u) PyUnicode_KIND(u) #define __Pyx_PyUnicode_DATA(u) PyUnicode_DATA(u) #define __Pyx_PyUnicode_READ(k, d, i) PyUnicode_READ(k, d, i) + #define __Pyx_PyUnicode_WRITE(k, d, i, ch) PyUnicode_WRITE(k, d, i, ch) + #define __Pyx_PyUnicode_IS_TRUE(u) (0 != (likely(PyUnicode_IS_READY(u)) ? PyUnicode_GET_LENGTH(u) : PyUnicode_GET_SIZE(u))) #else #define CYTHON_PEP393_ENABLED 0 + #define PyUnicode_1BYTE_KIND 1 + #define PyUnicode_2BYTE_KIND 2 + #define PyUnicode_4BYTE_KIND 4 #define __Pyx_PyUnicode_READY(op) (0) #define __Pyx_PyUnicode_GET_LENGTH(u) PyUnicode_GET_SIZE(u) #define __Pyx_PyUnicode_READ_CHAR(u, i) ((Py_UCS4)(PyUnicode_AS_UNICODE(u)[i])) + #define __Pyx_PyUnicode_MAX_CHAR_VALUE(u) ((sizeof(Py_UNICODE) == 2) ? 65535 : 1114111) #define __Pyx_PyUnicode_KIND(u) (sizeof(Py_UNICODE)) #define __Pyx_PyUnicode_DATA(u) ((void*)PyUnicode_AS_UNICODE(u)) #define __Pyx_PyUnicode_READ(k, d, i) ((void)(k), (Py_UCS4)(((Py_UNICODE*)d)[i])) + #define __Pyx_PyUnicode_WRITE(k, d, i, ch) (((void)(k)), ((Py_UNICODE*)d)[i] = ch) + #define __Pyx_PyUnicode_IS_TRUE(u) (0 != PyUnicode_GET_SIZE(u)) #endif #if CYTHON_COMPILING_IN_PYPY #define __Pyx_PyUnicode_Concat(a, b) PyNumber_Add(a, b) @@ -102,19 +477,29 @@ #if CYTHON_COMPILING_IN_PYPY && !defined(PyUnicode_Contains) #define PyUnicode_Contains(u, s) PySequence_Contains(u, s) #endif -#define __Pyx_PyString_FormatSafe(a, b) ((unlikely((a) == Py_None)) ? PyNumber_Remainder(a, b) : __Pyx_PyString_Format(a, b)) -#define __Pyx_PyUnicode_FormatSafe(a, b) ((unlikely((a) == Py_None)) ? PyNumber_Remainder(a, b) : PyUnicode_Format(a, b)) +#if CYTHON_COMPILING_IN_PYPY && !defined(PyByteArray_Check) + #define PyByteArray_Check(obj) PyObject_TypeCheck(obj, &PyByteArray_Type) +#endif +#if CYTHON_COMPILING_IN_PYPY && !defined(PyObject_Format) + #define PyObject_Format(obj, fmt) PyObject_CallMethod(obj, "__format__", "O", fmt) +#endif +#define __Pyx_PyString_FormatSafe(a, b) ((unlikely((a) == Py_None || (PyString_Check(b) && !PyString_CheckExact(b)))) ? PyNumber_Remainder(a, b) : __Pyx_PyString_Format(a, b)) +#define __Pyx_PyUnicode_FormatSafe(a, b) ((unlikely((a) == Py_None || (PyUnicode_Check(b) && !PyUnicode_CheckExact(b)))) ? PyNumber_Remainder(a, b) : PyUnicode_Format(a, b)) #if PY_MAJOR_VERSION >= 3 #define __Pyx_PyString_Format(a, b) PyUnicode_Format(a, b) #else #define __Pyx_PyString_Format(a, b) PyString_Format(a, b) #endif +#if PY_MAJOR_VERSION < 3 && !defined(PyObject_ASCII) + #define PyObject_ASCII(o) PyObject_Repr(o) +#endif #if PY_MAJOR_VERSION >= 3 #define PyBaseString_Type PyUnicode_Type #define PyStringObject PyUnicodeObject #define PyString_Type PyUnicode_Type #define PyString_Check PyUnicode_Check #define PyString_CheckExact PyUnicode_CheckExact + #define PyObject_Unicode PyObject_Str #endif #if PY_MAJOR_VERSION >= 3 #define __Pyx_PyBaseString_Check(obj) PyUnicode_Check(obj) @@ -126,7 +511,11 @@ #ifndef PySet_CheckExact #define PySet_CheckExact(obj) (Py_TYPE(obj) == &PySet_Type) #endif -#define __Pyx_TypeCheck(obj, type) PyObject_TypeCheck(obj, (PyTypeObject *)type) +#if CYTHON_ASSUME_SAFE_MACROS + #define __Pyx_PySequence_SIZE(seq) Py_SIZE(seq) +#else + #define __Pyx_PySequence_SIZE(seq) PySequence_Size(seq) +#endif #if PY_MAJOR_VERSION >= 3 #define PyIntObject PyLongObject #define PyInt_Type PyLong_Type @@ -161,46 +550,26 @@ #define __Pyx_PyInt_AsHash_t PyInt_AsSsize_t #endif #if PY_MAJOR_VERSION >= 3 - #define __Pyx_PyMethod_New(func, self, klass) ((self) ? PyMethod_New(func, self) : PyInstanceMethod_New(func)) + #define __Pyx_PyMethod_New(func, self, klass) ((self) ? PyMethod_New(func, self) : (Py_INCREF(func), func)) #else #define __Pyx_PyMethod_New(func, self, klass) PyMethod_New(func, self, klass) #endif -#if PY_VERSION_HEX >= 0x030500B1 -#define __Pyx_PyAsyncMethodsStruct PyAsyncMethods -#define __Pyx_PyType_AsAsync(obj) (Py_TYPE(obj)->tp_as_async) -#elif CYTHON_COMPILING_IN_CPYTHON && PY_MAJOR_VERSION >= 3 -typedef struct { - unaryfunc am_await; - unaryfunc am_aiter; - unaryfunc am_anext; -} __Pyx_PyAsyncMethodsStruct; -#define __Pyx_PyType_AsAsync(obj) ((__Pyx_PyAsyncMethodsStruct*) (Py_TYPE(obj)->tp_reserved)) +#if CYTHON_USE_ASYNC_SLOTS + #if PY_VERSION_HEX >= 0x030500B1 + #define __Pyx_PyAsyncMethodsStruct PyAsyncMethods + #define __Pyx_PyType_AsAsync(obj) (Py_TYPE(obj)->tp_as_async) + #else + #define __Pyx_PyType_AsAsync(obj) ((__Pyx_PyAsyncMethodsStruct*) (Py_TYPE(obj)->tp_reserved)) + #endif #else -#define __Pyx_PyType_AsAsync(obj) NULL + #define __Pyx_PyType_AsAsync(obj) NULL #endif -#ifndef CYTHON_RESTRICT - #if defined(__GNUC__) - #define CYTHON_RESTRICT __restrict__ - #elif defined(_MSC_VER) && _MSC_VER >= 1400 - #define CYTHON_RESTRICT __restrict - #elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L - #define CYTHON_RESTRICT restrict - #else - #define CYTHON_RESTRICT - #endif -#endif -#define __Pyx_void_to_None(void_result) (void_result, Py_INCREF(Py_None), Py_None) - -#ifndef CYTHON_INLINE - #if defined(__GNUC__) - #define CYTHON_INLINE __inline__ - #elif defined(_MSC_VER) - #define CYTHON_INLINE __inline - #elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L - #define CYTHON_INLINE inline - #else - #define CYTHON_INLINE - #endif +#ifndef __Pyx_PyAsyncMethodsStruct + typedef struct { + unaryfunc am_await; + unaryfunc am_aiter; + unaryfunc am_anext; + } __Pyx_PyAsyncMethodsStruct; #endif #if defined(WIN32) || defined(MS_WINDOWS) @@ -216,16 +585,18 @@ static CYTHON_INLINE float __PYX_NAN() { return value; } #endif - - -#if PY_MAJOR_VERSION >= 3 - #define __Pyx_PyNumber_Divide(x,y) PyNumber_TrueDivide(x,y) - #define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceTrueDivide(x,y) +#if defined(__CYGWIN__) && defined(_LDBL_EQ_DBL) +#define __Pyx_truncl trunc #else - #define __Pyx_PyNumber_Divide(x,y) PyNumber_Divide(x,y) - #define __Pyx_PyNumber_InPlaceDivide(x,y) PyNumber_InPlaceDivide(x,y) +#define __Pyx_truncl truncl #endif + +#define __PYX_ERR(f_index, lineno, Ln_error) \ +{ \ + __pyx_filename = __pyx_f[f_index]; __pyx_lineno = lineno; __pyx_clineno = __LINE__; goto Ln_error; \ +} + #ifndef __PYX_EXTERN_C #ifdef __cplusplus #define __PYX_EXTERN_C extern "C" @@ -236,10 +607,10 @@ static CYTHON_INLINE float __PYX_NAN() { #define __PYX_HAVE__GPy__util__linalg_cython #define __PYX_HAVE_API__GPy__util__linalg_cython -#include "math.h" -#include "string.h" -#include "stdio.h" -#include "stdlib.h" +/* Early includes */ +#include +#include +#include #include "numpy/arrayobject.h" #include "numpy/ufuncobject.h" #include "pythread.h" @@ -247,31 +618,11 @@ static CYTHON_INLINE float __PYX_NAN() { #include #endif /* _OPENMP */ -#ifdef PYREX_WITHOUT_ASSERTIONS +#if defined(PYREX_WITHOUT_ASSERTIONS) && !defined(CYTHON_WITHOUT_ASSERTIONS) #define CYTHON_WITHOUT_ASSERTIONS #endif -#ifndef CYTHON_UNUSED -# if defined(__GNUC__) -# if !(defined(__cplusplus)) || (__GNUC__ > 3 || (__GNUC__ == 3 && __GNUC_MINOR__ >= 4)) -# define CYTHON_UNUSED __attribute__ ((__unused__)) -# else -# define CYTHON_UNUSED -# endif -# elif defined(__ICC) || (defined(__INTEL_COMPILER) && !defined(_MSC_VER)) -# define CYTHON_UNUSED __attribute__ ((__unused__)) -# else -# define CYTHON_UNUSED -# endif -#endif -#ifndef CYTHON_NCP_UNUSED -# if CYTHON_COMPILING_IN_CPYTHON -# define CYTHON_NCP_UNUSED -# else -# define CYTHON_NCP_UNUSED CYTHON_UNUSED -# endif -#endif -typedef struct {PyObject **p; char *s; const Py_ssize_t n; const char* encoding; +typedef struct {PyObject **p; const char *s; const Py_ssize_t n; const char* encoding; const char is_unicode; const char is_str; const char intern; } __Pyx_StringTabEntry; #define __PYX_DEFAULT_STRING_ENCODING_IS_ASCII 0 @@ -291,6 +642,9 @@ typedef struct {PyObject **p; char *s; const Py_ssize_t n; const char* encoding; (sizeof(type) == sizeof(Py_ssize_t) &&\ (is_signed || likely(v < (type)PY_SSIZE_T_MAX ||\ v == (type)PY_SSIZE_T_MAX))) ) +static CYTHON_INLINE int __Pyx_is_valid_index(Py_ssize_t i, Py_ssize_t limit) { + return (size_t) i < (size_t) limit; +} #if defined (__cplusplus) && __cplusplus >= 201103L #include #define __Pyx_sst_abs(value) std::abs(value) @@ -298,17 +652,17 @@ typedef struct {PyObject **p; char *s; const Py_ssize_t n; const char* encoding; #define __Pyx_sst_abs(value) abs(value) #elif SIZEOF_LONG >= SIZEOF_SIZE_T #define __Pyx_sst_abs(value) labs(value) +#elif defined (_MSC_VER) + #define __Pyx_sst_abs(value) ((Py_ssize_t)_abs64(value)) #elif defined (__STDC_VERSION__) && __STDC_VERSION__ >= 199901L #define __Pyx_sst_abs(value) llabs(value) -#elif defined (_MSC_VER) && defined (_M_X64) - #define __Pyx_sst_abs(value) _abs64(value) #elif defined (__GNUC__) #define __Pyx_sst_abs(value) __builtin_llabs(value) #else #define __Pyx_sst_abs(value) ((value<0) ? -value : value) #endif -static CYTHON_INLINE char* __Pyx_PyObject_AsString(PyObject*); -static CYTHON_INLINE char* __Pyx_PyObject_AsStringAndSize(PyObject*, Py_ssize_t* length); +static CYTHON_INLINE const char* __Pyx_PyObject_AsString(PyObject*); +static CYTHON_INLINE const char* __Pyx_PyObject_AsStringAndSize(PyObject*, Py_ssize_t* length); #define __Pyx_PyByteArray_FromString(s) PyByteArray_FromStringAndSize((const char*)s, strlen((const char*)s)) #define __Pyx_PyByteArray_FromStringAndSize(s, l) PyByteArray_FromStringAndSize((const char*)s, l) #define __Pyx_PyBytes_FromString PyBytes_FromString @@ -321,39 +675,52 @@ static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(const char*); #define __Pyx_PyStr_FromString __Pyx_PyUnicode_FromString #define __Pyx_PyStr_FromStringAndSize __Pyx_PyUnicode_FromStringAndSize #endif -#define __Pyx_PyObject_AsSString(s) ((signed char*) __Pyx_PyObject_AsString(s)) -#define __Pyx_PyObject_AsUString(s) ((unsigned char*) __Pyx_PyObject_AsString(s)) +#define __Pyx_PyBytes_AsWritableString(s) ((char*) PyBytes_AS_STRING(s)) +#define __Pyx_PyBytes_AsWritableSString(s) ((signed char*) PyBytes_AS_STRING(s)) +#define __Pyx_PyBytes_AsWritableUString(s) ((unsigned char*) PyBytes_AS_STRING(s)) +#define __Pyx_PyBytes_AsString(s) ((const char*) PyBytes_AS_STRING(s)) +#define __Pyx_PyBytes_AsSString(s) ((const signed char*) PyBytes_AS_STRING(s)) +#define __Pyx_PyBytes_AsUString(s) ((const unsigned char*) PyBytes_AS_STRING(s)) +#define __Pyx_PyObject_AsWritableString(s) ((char*) __Pyx_PyObject_AsString(s)) +#define __Pyx_PyObject_AsWritableSString(s) ((signed char*) __Pyx_PyObject_AsString(s)) +#define __Pyx_PyObject_AsWritableUString(s) ((unsigned char*) __Pyx_PyObject_AsString(s)) +#define __Pyx_PyObject_AsSString(s) ((const signed char*) __Pyx_PyObject_AsString(s)) +#define __Pyx_PyObject_AsUString(s) ((const unsigned char*) __Pyx_PyObject_AsString(s)) #define __Pyx_PyObject_FromCString(s) __Pyx_PyObject_FromString((const char*)s) #define __Pyx_PyBytes_FromCString(s) __Pyx_PyBytes_FromString((const char*)s) #define __Pyx_PyByteArray_FromCString(s) __Pyx_PyByteArray_FromString((const char*)s) #define __Pyx_PyStr_FromCString(s) __Pyx_PyStr_FromString((const char*)s) #define __Pyx_PyUnicode_FromCString(s) __Pyx_PyUnicode_FromString((const char*)s) -#if PY_MAJOR_VERSION < 3 -static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u) -{ +static CYTHON_INLINE size_t __Pyx_Py_UNICODE_strlen(const Py_UNICODE *u) { const Py_UNICODE *u_end = u; while (*u_end++) ; return (size_t)(u_end - u - 1); } -#else -#define __Pyx_Py_UNICODE_strlen Py_UNICODE_strlen -#endif #define __Pyx_PyUnicode_FromUnicode(u) PyUnicode_FromUnicode(u, __Pyx_Py_UNICODE_strlen(u)) #define __Pyx_PyUnicode_FromUnicodeAndLength PyUnicode_FromUnicode #define __Pyx_PyUnicode_AsUnicode PyUnicode_AsUnicode #define __Pyx_NewRef(obj) (Py_INCREF(obj), obj) #define __Pyx_Owned_Py_None(b) __Pyx_NewRef(Py_None) -#define __Pyx_PyBool_FromLong(b) ((b) ? __Pyx_NewRef(Py_True) : __Pyx_NewRef(Py_False)) +static CYTHON_INLINE PyObject * __Pyx_PyBool_FromLong(long b); static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject*); -static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x); +static CYTHON_INLINE int __Pyx_PyObject_IsTrueAndDecref(PyObject*); +static CYTHON_INLINE PyObject* __Pyx_PyNumber_IntOrLong(PyObject* x); +#define __Pyx_PySequence_Tuple(obj)\ + (likely(PyTuple_CheckExact(obj)) ? __Pyx_NewRef(obj) : PySequence_Tuple(obj)) static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject*); static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t); -#if CYTHON_COMPILING_IN_CPYTHON +#if CYTHON_ASSUME_SAFE_MACROS #define __pyx_PyFloat_AsDouble(x) (PyFloat_CheckExact(x) ? PyFloat_AS_DOUBLE(x) : PyFloat_AsDouble(x)) #else #define __pyx_PyFloat_AsDouble(x) PyFloat_AsDouble(x) #endif #define __pyx_PyFloat_AsFloat(x) ((float) __pyx_PyFloat_AsDouble(x)) +#if PY_MAJOR_VERSION >= 3 +#define __Pyx_PyNumber_Int(x) (PyLong_CheckExact(x) ? __Pyx_NewRef(x) : PyNumber_Long(x)) +#else +#define __Pyx_PyNumber_Int(x) (PyInt_CheckExact(x) ? __Pyx_NewRef(x) : PyNumber_Int(x)) +#endif +#define __Pyx_PyNumber_Float(x) (PyFloat_CheckExact(x) ? __Pyx_NewRef(x) : PyNumber_Float(x)) #if PY_MAJOR_VERSION < 3 && __PYX_DEFAULT_STRING_ENCODING_IS_ASCII static int __Pyx_sys_getdefaultencoding_not_ascii; static int __Pyx_init_sys_getdefaultencoding_params(void) { @@ -417,7 +784,7 @@ static int __Pyx_init_sys_getdefaultencoding_params(void) { if (!default_encoding) goto bad; default_encoding_c = PyBytes_AsString(default_encoding); if (!default_encoding_c) goto bad; - __PYX_DEFAULT_STRING_ENCODING = (char*) malloc(strlen(default_encoding_c)); + __PYX_DEFAULT_STRING_ENCODING = (char*) malloc(strlen(default_encoding_c) + 1); if (!__PYX_DEFAULT_STRING_ENCODING) goto bad; strcpy(__PYX_DEFAULT_STRING_ENCODING, default_encoding_c); Py_DECREF(default_encoding); @@ -438,17 +805,21 @@ bad: #define likely(x) (x) #define unlikely(x) (x) #endif /* __GNUC__ */ +static CYTHON_INLINE void __Pyx_pretend_to_initialize(void* ptr) { (void)ptr; } -static PyObject *__pyx_m; +static PyObject *__pyx_m = NULL; static PyObject *__pyx_d; static PyObject *__pyx_b; +static PyObject *__pyx_cython_runtime = NULL; static PyObject *__pyx_empty_tuple; static PyObject *__pyx_empty_bytes; +static PyObject *__pyx_empty_unicode; static int __pyx_lineno; static int __pyx_clineno = 0; static const char * __pyx_cfilenm= __FILE__; static const char *__pyx_filename; +/* Header.proto */ #if !defined(CYTHON_CCOMPLEX) #if defined(__cplusplus) #define CYTHON_CCOMPLEX 1 @@ -478,6 +849,7 @@ static const char *__pyx_f[] = { "bool.pxd", "complex.pxd", }; +/* BufferFormatStructs.proto */ #define IS_UNSIGNED(type) (((type) -1) > 0) struct __Pyx_StructField_; #define __PYX_BUF_FLAGS_PACKED_STRUCT (1 << 0) @@ -513,8 +885,20 @@ typedef struct { char is_valid_array; } __Pyx_BufFmt_Context; +/* NoFastGil.proto */ +#define __Pyx_PyGILState_Ensure PyGILState_Ensure +#define __Pyx_PyGILState_Release PyGILState_Release +#define __Pyx_FastGIL_Remember() +#define __Pyx_FastGIL_Forget() +#define __Pyx_FastGilFuncInit() -/* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":725 +/* ForceInitThreads.proto */ +#ifndef __PYX_FORCE_INIT_THREADS + #define __PYX_FORCE_INIT_THREADS 0 +#endif + + +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":776 * # in Cython to enable them only on the right systems. * * ctypedef npy_int8 int8_t # <<<<<<<<<<<<<< @@ -523,7 +907,7 @@ typedef struct { */ typedef npy_int8 __pyx_t_5numpy_int8_t; -/* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":726 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":777 * * ctypedef npy_int8 int8_t * ctypedef npy_int16 int16_t # <<<<<<<<<<<<<< @@ -532,7 +916,7 @@ typedef npy_int8 __pyx_t_5numpy_int8_t; */ typedef npy_int16 __pyx_t_5numpy_int16_t; -/* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":727 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":778 * ctypedef npy_int8 int8_t * ctypedef npy_int16 int16_t * ctypedef npy_int32 int32_t # <<<<<<<<<<<<<< @@ -541,7 +925,7 @@ typedef npy_int16 __pyx_t_5numpy_int16_t; */ typedef npy_int32 __pyx_t_5numpy_int32_t; -/* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":728 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":779 * ctypedef npy_int16 int16_t * ctypedef npy_int32 int32_t * ctypedef npy_int64 int64_t # <<<<<<<<<<<<<< @@ -550,7 +934,7 @@ typedef npy_int32 __pyx_t_5numpy_int32_t; */ typedef npy_int64 __pyx_t_5numpy_int64_t; -/* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":732 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":783 * #ctypedef npy_int128 int128_t * * ctypedef npy_uint8 uint8_t # <<<<<<<<<<<<<< @@ -559,7 +943,7 @@ typedef npy_int64 __pyx_t_5numpy_int64_t; */ typedef npy_uint8 __pyx_t_5numpy_uint8_t; -/* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":733 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":784 * * ctypedef npy_uint8 uint8_t * ctypedef npy_uint16 uint16_t # <<<<<<<<<<<<<< @@ -568,7 +952,7 @@ typedef npy_uint8 __pyx_t_5numpy_uint8_t; */ typedef npy_uint16 __pyx_t_5numpy_uint16_t; -/* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":734 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":785 * ctypedef npy_uint8 uint8_t * ctypedef npy_uint16 uint16_t * ctypedef npy_uint32 uint32_t # <<<<<<<<<<<<<< @@ -577,7 +961,7 @@ typedef npy_uint16 __pyx_t_5numpy_uint16_t; */ typedef npy_uint32 __pyx_t_5numpy_uint32_t; -/* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":735 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":786 * ctypedef npy_uint16 uint16_t * ctypedef npy_uint32 uint32_t * ctypedef npy_uint64 uint64_t # <<<<<<<<<<<<<< @@ -586,7 +970,7 @@ typedef npy_uint32 __pyx_t_5numpy_uint32_t; */ typedef npy_uint64 __pyx_t_5numpy_uint64_t; -/* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":739 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":790 * #ctypedef npy_uint128 uint128_t * * ctypedef npy_float32 float32_t # <<<<<<<<<<<<<< @@ -595,7 +979,7 @@ typedef npy_uint64 __pyx_t_5numpy_uint64_t; */ typedef npy_float32 __pyx_t_5numpy_float32_t; -/* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":740 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":791 * * ctypedef npy_float32 float32_t * ctypedef npy_float64 float64_t # <<<<<<<<<<<<<< @@ -604,7 +988,7 @@ typedef npy_float32 __pyx_t_5numpy_float32_t; */ typedef npy_float64 __pyx_t_5numpy_float64_t; -/* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":749 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":800 * # The int types are mapped a bit surprising -- * # numpy.int corresponds to 'l' and numpy.long to 'q' * ctypedef npy_long int_t # <<<<<<<<<<<<<< @@ -613,7 +997,7 @@ typedef npy_float64 __pyx_t_5numpy_float64_t; */ typedef npy_long __pyx_t_5numpy_int_t; -/* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":750 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":801 * # numpy.int corresponds to 'l' and numpy.long to 'q' * ctypedef npy_long int_t * ctypedef npy_longlong long_t # <<<<<<<<<<<<<< @@ -622,7 +1006,7 @@ typedef npy_long __pyx_t_5numpy_int_t; */ typedef npy_longlong __pyx_t_5numpy_long_t; -/* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":751 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":802 * ctypedef npy_long int_t * ctypedef npy_longlong long_t * ctypedef npy_longlong longlong_t # <<<<<<<<<<<<<< @@ -631,7 +1015,7 @@ typedef npy_longlong __pyx_t_5numpy_long_t; */ typedef npy_longlong __pyx_t_5numpy_longlong_t; -/* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":753 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":804 * ctypedef npy_longlong longlong_t * * ctypedef npy_ulong uint_t # <<<<<<<<<<<<<< @@ -640,7 +1024,7 @@ typedef npy_longlong __pyx_t_5numpy_longlong_t; */ typedef npy_ulong __pyx_t_5numpy_uint_t; -/* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":754 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":805 * * ctypedef npy_ulong uint_t * ctypedef npy_ulonglong ulong_t # <<<<<<<<<<<<<< @@ -649,7 +1033,7 @@ typedef npy_ulong __pyx_t_5numpy_uint_t; */ typedef npy_ulonglong __pyx_t_5numpy_ulong_t; -/* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":755 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":806 * ctypedef npy_ulong uint_t * ctypedef npy_ulonglong ulong_t * ctypedef npy_ulonglong ulonglong_t # <<<<<<<<<<<<<< @@ -658,7 +1042,7 @@ typedef npy_ulonglong __pyx_t_5numpy_ulong_t; */ typedef npy_ulonglong __pyx_t_5numpy_ulonglong_t; -/* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":757 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":808 * ctypedef npy_ulonglong ulonglong_t * * ctypedef npy_intp intp_t # <<<<<<<<<<<<<< @@ -667,7 +1051,7 @@ typedef npy_ulonglong __pyx_t_5numpy_ulonglong_t; */ typedef npy_intp __pyx_t_5numpy_intp_t; -/* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":758 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":809 * * ctypedef npy_intp intp_t * ctypedef npy_uintp uintp_t # <<<<<<<<<<<<<< @@ -676,7 +1060,7 @@ typedef npy_intp __pyx_t_5numpy_intp_t; */ typedef npy_uintp __pyx_t_5numpy_uintp_t; -/* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":760 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":811 * ctypedef npy_uintp uintp_t * * ctypedef npy_double float_t # <<<<<<<<<<<<<< @@ -685,7 +1069,7 @@ typedef npy_uintp __pyx_t_5numpy_uintp_t; */ typedef npy_double __pyx_t_5numpy_float_t; -/* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":761 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":812 * * ctypedef npy_double float_t * ctypedef npy_double double_t # <<<<<<<<<<<<<< @@ -694,7 +1078,7 @@ typedef npy_double __pyx_t_5numpy_float_t; */ typedef npy_double __pyx_t_5numpy_double_t; -/* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":762 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":813 * ctypedef npy_double float_t * ctypedef npy_double double_t * ctypedef npy_longdouble longdouble_t # <<<<<<<<<<<<<< @@ -702,6 +1086,7 @@ typedef npy_double __pyx_t_5numpy_double_t; * ctypedef npy_cfloat cfloat_t */ typedef npy_longdouble __pyx_t_5numpy_longdouble_t; +/* Declarations.proto */ #if CYTHON_CCOMPLEX #ifdef __cplusplus typedef ::std::complex< float > __pyx_t_float_complex; @@ -711,7 +1096,9 @@ typedef npy_longdouble __pyx_t_5numpy_longdouble_t; #else typedef struct { float real, imag; } __pyx_t_float_complex; #endif +static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float, float); +/* Declarations.proto */ #if CYTHON_CCOMPLEX #ifdef __cplusplus typedef ::std::complex< double > __pyx_t_double_complex; @@ -721,11 +1108,12 @@ typedef npy_longdouble __pyx_t_5numpy_longdouble_t; #else typedef struct { double real, imag; } __pyx_t_double_complex; #endif +static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double, double); /*--- Type declarations ---*/ -/* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":764 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":815 * ctypedef npy_longdouble longdouble_t * * ctypedef npy_cfloat cfloat_t # <<<<<<<<<<<<<< @@ -734,7 +1122,7 @@ typedef npy_longdouble __pyx_t_5numpy_longdouble_t; */ typedef npy_cfloat __pyx_t_5numpy_cfloat_t; -/* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":765 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":816 * * ctypedef npy_cfloat cfloat_t * ctypedef npy_cdouble cdouble_t # <<<<<<<<<<<<<< @@ -743,7 +1131,7 @@ typedef npy_cfloat __pyx_t_5numpy_cfloat_t; */ typedef npy_cdouble __pyx_t_5numpy_cdouble_t; -/* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":766 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":817 * ctypedef npy_cfloat cfloat_t * ctypedef npy_cdouble cdouble_t * ctypedef npy_clongdouble clongdouble_t # <<<<<<<<<<<<<< @@ -752,7 +1140,7 @@ typedef npy_cdouble __pyx_t_5numpy_cdouble_t; */ typedef npy_clongdouble __pyx_t_5numpy_clongdouble_t; -/* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":768 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":819 * ctypedef npy_clongdouble clongdouble_t * * ctypedef npy_cdouble complex_t # <<<<<<<<<<<<<< @@ -762,6 +1150,7 @@ typedef npy_clongdouble __pyx_t_5numpy_clongdouble_t; typedef npy_cdouble __pyx_t_5numpy_complex_t; /* --- Runtime support code (head) --- */ +/* Refnanny.proto */ #ifndef CYTHON_REFNANNY #define CYTHON_REFNANNY 0 #endif @@ -824,83 +1213,218 @@ typedef npy_cdouble __pyx_t_5numpy_complex_t; #define __Pyx_CLEAR(r) do { PyObject* tmp = ((PyObject*)(r)); r = NULL; __Pyx_DECREF(tmp);} while(0) #define __Pyx_XCLEAR(r) do { if((r) != NULL) {PyObject* tmp = ((PyObject*)(r)); r = NULL; __Pyx_DECREF(tmp);}} while(0) -#if CYTHON_COMPILING_IN_CPYTHON -static CYTHON_INLINE PyObject* __Pyx_PyObject_GetAttrStr(PyObject* obj, PyObject* attr_name) { - PyTypeObject* tp = Py_TYPE(obj); - if (likely(tp->tp_getattro)) - return tp->tp_getattro(obj, attr_name); -#if PY_MAJOR_VERSION < 3 - if (likely(tp->tp_getattr)) - return tp->tp_getattr(obj, PyString_AS_STRING(attr_name)); -#endif - return PyObject_GetAttr(obj, attr_name); -} +/* PyObjectGetAttrStr.proto */ +#if CYTHON_USE_TYPE_SLOTS +static CYTHON_INLINE PyObject* __Pyx_PyObject_GetAttrStr(PyObject* obj, PyObject* attr_name); #else #define __Pyx_PyObject_GetAttrStr(o,n) PyObject_GetAttr(o,n) #endif +/* GetBuiltinName.proto */ static PyObject *__Pyx_GetBuiltinName(PyObject *name); +/* RaiseArgTupleInvalid.proto */ static void __Pyx_RaiseArgtupleInvalid(const char* func_name, int exact, Py_ssize_t num_min, Py_ssize_t num_max, Py_ssize_t num_found); +/* RaiseDoubleKeywords.proto */ static void __Pyx_RaiseDoubleKeywordsError(const char* func_name, PyObject* kw_name); +/* ParseKeywords.proto */ static int __Pyx_ParseOptionalKeywords(PyObject *kwds, PyObject **argnames[],\ PyObject *kwds2, PyObject *values[], Py_ssize_t num_pos_args,\ const char* function_name); -static CYTHON_INLINE int __Pyx_ArgTypeTest(PyObject *obj, PyTypeObject *type, int none_allowed, - const char *name, int exact); +/* ArgTypeTest.proto */ +#define __Pyx_ArgTypeTest(obj, type, none_allowed, name, exact)\ + ((likely((Py_TYPE(obj) == type) | (none_allowed && (obj == Py_None)))) ? 1 :\ + __Pyx__ArgTypeTest(obj, type, name, exact)) +static int __Pyx__ArgTypeTest(PyObject *obj, PyTypeObject *type, const char *name, int exact); -static CYTHON_INLINE int __Pyx_GetBufferAndValidate(Py_buffer* buf, PyObject* obj, +/* IsLittleEndian.proto */ +static CYTHON_INLINE int __Pyx_Is_Little_Endian(void); + +/* BufferFormatCheck.proto */ +static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const char* ts); +static void __Pyx_BufFmt_Init(__Pyx_BufFmt_Context* ctx, + __Pyx_BufFmt_StackElem* stack, + __Pyx_TypeInfo* type); + +/* BufferGetAndValidate.proto */ +#define __Pyx_GetBufferAndValidate(buf, obj, dtype, flags, nd, cast, stack)\ + ((obj == Py_None || obj == NULL) ?\ + (__Pyx_ZeroBuffer(buf), 0) :\ + __Pyx__GetBufferAndValidate(buf, obj, dtype, flags, nd, cast, stack)) +static int __Pyx__GetBufferAndValidate(Py_buffer* buf, PyObject* obj, __Pyx_TypeInfo* dtype, int flags, int nd, int cast, __Pyx_BufFmt_StackElem* stack); +static void __Pyx_ZeroBuffer(Py_buffer* buf); static CYTHON_INLINE void __Pyx_SafeReleaseBuffer(Py_buffer* info); +static Py_ssize_t __Pyx_minusones[] = { -1, -1, -1, -1, -1, -1, -1, -1 }; +static Py_ssize_t __Pyx_zeros[] = { 0, 0, 0, 0, 0, 0, 0, 0 }; #define __Pyx_BufPtrStrided2d(type, buf, i0, s0, i1, s1) (type)((char*)buf + i0 * s0 + i1 * s1) -static CYTHON_INLINE void __Pyx_ErrRestore(PyObject *type, PyObject *value, PyObject *tb); -static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb); +/* PyThreadStateGet.proto */ +#if CYTHON_FAST_THREAD_STATE +#define __Pyx_PyThreadState_declare PyThreadState *__pyx_tstate; +#define __Pyx_PyThreadState_assign __pyx_tstate = __Pyx_PyThreadState_Current; +#define __Pyx_PyErr_Occurred() __pyx_tstate->curexc_type +#else +#define __Pyx_PyThreadState_declare +#define __Pyx_PyThreadState_assign +#define __Pyx_PyErr_Occurred() PyErr_Occurred() +#endif + +/* PyErrFetchRestore.proto */ +#if CYTHON_FAST_THREAD_STATE +#define __Pyx_PyErr_Clear() __Pyx_ErrRestore(NULL, NULL, NULL) +#define __Pyx_ErrRestoreWithState(type, value, tb) __Pyx_ErrRestoreInState(PyThreadState_GET(), type, value, tb) +#define __Pyx_ErrFetchWithState(type, value, tb) __Pyx_ErrFetchInState(PyThreadState_GET(), type, value, tb) +#define __Pyx_ErrRestore(type, value, tb) __Pyx_ErrRestoreInState(__pyx_tstate, type, value, tb) +#define __Pyx_ErrFetch(type, value, tb) __Pyx_ErrFetchInState(__pyx_tstate, type, value, tb) +static CYTHON_INLINE void __Pyx_ErrRestoreInState(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb); +static CYTHON_INLINE void __Pyx_ErrFetchInState(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb); +#if CYTHON_COMPILING_IN_CPYTHON +#define __Pyx_PyErr_SetNone(exc) (Py_INCREF(exc), __Pyx_ErrRestore((exc), NULL, NULL)) +#else +#define __Pyx_PyErr_SetNone(exc) PyErr_SetNone(exc) +#endif +#else +#define __Pyx_PyErr_Clear() PyErr_Clear() +#define __Pyx_PyErr_SetNone(exc) PyErr_SetNone(exc) +#define __Pyx_ErrRestoreWithState(type, value, tb) PyErr_Restore(type, value, tb) +#define __Pyx_ErrFetchWithState(type, value, tb) PyErr_Fetch(type, value, tb) +#define __Pyx_ErrRestoreInState(tstate, type, value, tb) PyErr_Restore(type, value, tb) +#define __Pyx_ErrFetchInState(tstate, type, value, tb) PyErr_Fetch(type, value, tb) +#define __Pyx_ErrRestore(type, value, tb) PyErr_Restore(type, value, tb) +#define __Pyx_ErrFetch(type, value, tb) PyErr_Fetch(type, value, tb) +#endif #define __Pyx_BufPtrStrided1d(type, buf, i0, s0) (type)((char*)buf + i0 * s0) +/* PyObjectCall.proto */ #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyObject_Call(PyObject *func, PyObject *arg, PyObject *kw); #else #define __Pyx_PyObject_Call(func, arg, kw) PyObject_Call(func, arg, kw) #endif +/* RaiseException.proto */ static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject *cause); -#if PY_MAJOR_VERSION >= 3 && !CYTHON_COMPILING_IN_PYPY -static PyObject *__Pyx_PyDict_GetItem(PyObject *d, PyObject* key) { - PyObject *value; - value = PyDict_GetItemWithError(d, key); - if (unlikely(!value)) { - if (!PyErr_Occurred()) { - PyObject* args = PyTuple_Pack(1, key); - if (likely(args)) - PyErr_SetObject(PyExc_KeyError, args); - Py_XDECREF(args); - } - return NULL; - } - Py_INCREF(value); - return value; -} +/* PyCFunctionFastCall.proto */ +#if CYTHON_FAST_PYCCALL +static CYTHON_INLINE PyObject *__Pyx_PyCFunction_FastCall(PyObject *func, PyObject **args, Py_ssize_t nargs); #else - #define __Pyx_PyDict_GetItem(d, key) PyObject_GetItem(d, key) +#define __Pyx_PyCFunction_FastCall(func, args, nargs) (assert(0), NULL) #endif +/* PyFunctionFastCall.proto */ +#if CYTHON_FAST_PYCALL +#define __Pyx_PyFunction_FastCall(func, args, nargs)\ + __Pyx_PyFunction_FastCallDict((func), (args), (nargs), NULL) +#if 1 || PY_VERSION_HEX < 0x030600B1 +static PyObject *__Pyx_PyFunction_FastCallDict(PyObject *func, PyObject **args, int nargs, PyObject *kwargs); +#else +#define __Pyx_PyFunction_FastCallDict(func, args, nargs, kwargs) _PyFunction_FastCallDict(func, args, nargs, kwargs) +#endif +#define __Pyx_BUILD_ASSERT_EXPR(cond)\ + (sizeof(char [1 - 2*!(cond)]) - 1) +#ifndef Py_MEMBER_SIZE +#define Py_MEMBER_SIZE(type, member) sizeof(((type *)0)->member) +#endif + static size_t __pyx_pyframe_localsplus_offset = 0; + #include "frameobject.h" + #define __Pxy_PyFrame_Initialize_Offsets()\ + ((void)__Pyx_BUILD_ASSERT_EXPR(sizeof(PyFrameObject) == offsetof(PyFrameObject, f_localsplus) + Py_MEMBER_SIZE(PyFrameObject, f_localsplus)),\ + (void)(__pyx_pyframe_localsplus_offset = ((size_t)PyFrame_Type.tp_basicsize) - Py_MEMBER_SIZE(PyFrameObject, f_localsplus))) + #define __Pyx_PyFrame_GetLocalsplus(frame)\ + (assert(__pyx_pyframe_localsplus_offset), (PyObject **)(((char *)(frame)) + __pyx_pyframe_localsplus_offset)) +#endif + +/* PyObjectCallMethO.proto */ +#if CYTHON_COMPILING_IN_CPYTHON +static CYTHON_INLINE PyObject* __Pyx_PyObject_CallMethO(PyObject *func, PyObject *arg); +#endif + +/* PyObjectCallOneArg.proto */ +static CYTHON_INLINE PyObject* __Pyx_PyObject_CallOneArg(PyObject *func, PyObject *arg); + +/* DictGetItem.proto */ +#if PY_MAJOR_VERSION >= 3 && !CYTHON_COMPILING_IN_PYPY +static PyObject *__Pyx_PyDict_GetItem(PyObject *d, PyObject* key); +#define __Pyx_PyObject_Dict_GetItem(obj, name)\ + (likely(PyDict_CheckExact(obj)) ?\ + __Pyx_PyDict_GetItem(obj, name) : PyObject_GetItem(obj, name)) +#else +#define __Pyx_PyDict_GetItem(d, key) PyObject_GetItem(d, key) +#define __Pyx_PyObject_Dict_GetItem(obj, name) PyObject_GetItem(obj, name) +#endif + +/* RaiseTooManyValuesToUnpack.proto */ static CYTHON_INLINE void __Pyx_RaiseTooManyValuesError(Py_ssize_t expected); +/* RaiseNeedMoreValuesToUnpack.proto */ static CYTHON_INLINE void __Pyx_RaiseNeedMoreValuesError(Py_ssize_t index); +/* RaiseNoneIterError.proto */ static CYTHON_INLINE void __Pyx_RaiseNoneNotIterableError(void); +/* ExtTypeTest.proto */ static CYTHON_INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type); +/* GetTopmostException.proto */ +#if CYTHON_USE_EXC_INFO_STACK +static _PyErr_StackItem * __Pyx_PyErr_GetTopmostException(PyThreadState *tstate); +#endif + +/* SaveResetException.proto */ +#if CYTHON_FAST_THREAD_STATE +#define __Pyx_ExceptionSave(type, value, tb) __Pyx__ExceptionSave(__pyx_tstate, type, value, tb) +static CYTHON_INLINE void __Pyx__ExceptionSave(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb); +#define __Pyx_ExceptionReset(type, value, tb) __Pyx__ExceptionReset(__pyx_tstate, type, value, tb) +static CYTHON_INLINE void __Pyx__ExceptionReset(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb); +#else +#define __Pyx_ExceptionSave(type, value, tb) PyErr_GetExcInfo(type, value, tb) +#define __Pyx_ExceptionReset(type, value, tb) PyErr_SetExcInfo(type, value, tb) +#endif + +/* PyErrExceptionMatches.proto */ +#if CYTHON_FAST_THREAD_STATE +#define __Pyx_PyErr_ExceptionMatches(err) __Pyx_PyErr_ExceptionMatchesInState(__pyx_tstate, err) +static CYTHON_INLINE int __Pyx_PyErr_ExceptionMatchesInState(PyThreadState* tstate, PyObject* err); +#else +#define __Pyx_PyErr_ExceptionMatches(err) PyErr_ExceptionMatches(err) +#endif + +/* GetException.proto */ +#if CYTHON_FAST_THREAD_STATE +#define __Pyx_GetException(type, value, tb) __Pyx__GetException(__pyx_tstate, type, value, tb) +static int __Pyx__GetException(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb); +#else +static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb); +#endif + +/* TypeImport.proto */ +#ifndef __PYX_HAVE_RT_ImportType_proto +#define __PYX_HAVE_RT_ImportType_proto +enum __Pyx_ImportType_CheckSize { + __Pyx_ImportType_CheckSize_Error = 0, + __Pyx_ImportType_CheckSize_Warn = 1, + __Pyx_ImportType_CheckSize_Ignore = 2 +}; +static PyTypeObject *__Pyx_ImportType(PyObject* module, const char *module_name, const char *class_name, size_t size, enum __Pyx_ImportType_CheckSize check_size); +#endif + +/* CLineInTraceback.proto */ +#ifdef CYTHON_CLINE_IN_TRACEBACK +#define __Pyx_CLineForTraceback(tstate, c_line) (((CYTHON_CLINE_IN_TRACEBACK)) ? c_line : 0) +#else +static int __Pyx_CLineForTraceback(PyThreadState *tstate, int c_line); +#endif + +/* CodeObjectCache.proto */ typedef struct { - int code_line; PyCodeObject* code_object; + int code_line; } __Pyx_CodeObjectCacheEntry; struct __Pyx_CodeObjectCache { int count; @@ -912,9 +1436,11 @@ static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int co static PyCodeObject *__pyx_find_code_object(int code_line); static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object); +/* AddTraceback.proto */ static void __Pyx_AddTraceback(const char *funcname, int c_line, int py_line, const char *filename); +/* BufferStructDeclare.proto */ typedef struct { Py_ssize_t shape, strides, suboffsets; } __Pyx_Buf_DimInfo; @@ -937,17 +1463,10 @@ typedef struct { #endif -static Py_ssize_t __Pyx_zeros[] = {0, 0, 0, 0, 0, 0, 0, 0}; -static Py_ssize_t __Pyx_minusones[] = {-1, -1, -1, -1, -1, -1, -1, -1}; - -static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *); - +/* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value); -#ifndef __PYX_FORCE_INIT_THREADS - #define __PYX_FORCE_INIT_THREADS 0 -#endif - +/* RealImag.proto */ #if CYTHON_CCOMPLEX #ifdef __cplusplus #define __Pyx_CREAL(z) ((z).real()) @@ -960,7 +1479,8 @@ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value); #define __Pyx_CREAL(z) ((z).real) #define __Pyx_CIMAG(z) ((z).imag) #endif -#if (defined(_WIN32) || defined(__clang__)) && defined(__cplusplus) && CYTHON_CCOMPLEX +#if defined(__cplusplus) && CYTHON_CCOMPLEX\ + && (defined(_WIN32) || defined(__clang__) || (defined(__GNUC__) && (__GNUC__ >= 5 || __GNUC__ == 4 && __GNUC_MINOR__ >= 4 )) || __cplusplus >= 201103) #define __Pyx_SET_CREAL(z,x) ((z).real(x)) #define __Pyx_SET_CIMAG(z,y) ((z).imag(y)) #else @@ -968,104 +1488,111 @@ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value); #define __Pyx_SET_CIMAG(z,y) __Pyx_CIMAG(z) = (y) #endif -static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float, float); - +/* Arithmetic.proto */ #if CYTHON_CCOMPLEX - #define __Pyx_c_eqf(a, b) ((a)==(b)) - #define __Pyx_c_sumf(a, b) ((a)+(b)) - #define __Pyx_c_difff(a, b) ((a)-(b)) - #define __Pyx_c_prodf(a, b) ((a)*(b)) - #define __Pyx_c_quotf(a, b) ((a)/(b)) - #define __Pyx_c_negf(a) (-(a)) + #define __Pyx_c_eq_float(a, b) ((a)==(b)) + #define __Pyx_c_sum_float(a, b) ((a)+(b)) + #define __Pyx_c_diff_float(a, b) ((a)-(b)) + #define __Pyx_c_prod_float(a, b) ((a)*(b)) + #define __Pyx_c_quot_float(a, b) ((a)/(b)) + #define __Pyx_c_neg_float(a) (-(a)) #ifdef __cplusplus - #define __Pyx_c_is_zerof(z) ((z)==(float)0) - #define __Pyx_c_conjf(z) (::std::conj(z)) + #define __Pyx_c_is_zero_float(z) ((z)==(float)0) + #define __Pyx_c_conj_float(z) (::std::conj(z)) #if 1 - #define __Pyx_c_absf(z) (::std::abs(z)) - #define __Pyx_c_powf(a, b) (::std::pow(a, b)) + #define __Pyx_c_abs_float(z) (::std::abs(z)) + #define __Pyx_c_pow_float(a, b) (::std::pow(a, b)) #endif #else - #define __Pyx_c_is_zerof(z) ((z)==0) - #define __Pyx_c_conjf(z) (conjf(z)) + #define __Pyx_c_is_zero_float(z) ((z)==0) + #define __Pyx_c_conj_float(z) (conjf(z)) #if 1 - #define __Pyx_c_absf(z) (cabsf(z)) - #define __Pyx_c_powf(a, b) (cpowf(a, b)) + #define __Pyx_c_abs_float(z) (cabsf(z)) + #define __Pyx_c_pow_float(a, b) (cpowf(a, b)) #endif #endif #else - static CYTHON_INLINE int __Pyx_c_eqf(__pyx_t_float_complex, __pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sumf(__pyx_t_float_complex, __pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_difff(__pyx_t_float_complex, __pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_prodf(__pyx_t_float_complex, __pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quotf(__pyx_t_float_complex, __pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_negf(__pyx_t_float_complex); - static CYTHON_INLINE int __Pyx_c_is_zerof(__pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conjf(__pyx_t_float_complex); + static CYTHON_INLINE int __Pyx_c_eq_float(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sum_float(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_diff_float(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_prod_float(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quot_float(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_neg_float(__pyx_t_float_complex); + static CYTHON_INLINE int __Pyx_c_is_zero_float(__pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conj_float(__pyx_t_float_complex); #if 1 - static CYTHON_INLINE float __Pyx_c_absf(__pyx_t_float_complex); - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_powf(__pyx_t_float_complex, __pyx_t_float_complex); + static CYTHON_INLINE float __Pyx_c_abs_float(__pyx_t_float_complex); + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_pow_float(__pyx_t_float_complex, __pyx_t_float_complex); #endif #endif -static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double, double); - +/* Arithmetic.proto */ #if CYTHON_CCOMPLEX - #define __Pyx_c_eq(a, b) ((a)==(b)) - #define __Pyx_c_sum(a, b) ((a)+(b)) - #define __Pyx_c_diff(a, b) ((a)-(b)) - #define __Pyx_c_prod(a, b) ((a)*(b)) - #define __Pyx_c_quot(a, b) ((a)/(b)) - #define __Pyx_c_neg(a) (-(a)) + #define __Pyx_c_eq_double(a, b) ((a)==(b)) + #define __Pyx_c_sum_double(a, b) ((a)+(b)) + #define __Pyx_c_diff_double(a, b) ((a)-(b)) + #define __Pyx_c_prod_double(a, b) ((a)*(b)) + #define __Pyx_c_quot_double(a, b) ((a)/(b)) + #define __Pyx_c_neg_double(a) (-(a)) #ifdef __cplusplus - #define __Pyx_c_is_zero(z) ((z)==(double)0) - #define __Pyx_c_conj(z) (::std::conj(z)) + #define __Pyx_c_is_zero_double(z) ((z)==(double)0) + #define __Pyx_c_conj_double(z) (::std::conj(z)) #if 1 - #define __Pyx_c_abs(z) (::std::abs(z)) - #define __Pyx_c_pow(a, b) (::std::pow(a, b)) + #define __Pyx_c_abs_double(z) (::std::abs(z)) + #define __Pyx_c_pow_double(a, b) (::std::pow(a, b)) #endif #else - #define __Pyx_c_is_zero(z) ((z)==0) - #define __Pyx_c_conj(z) (conj(z)) + #define __Pyx_c_is_zero_double(z) ((z)==0) + #define __Pyx_c_conj_double(z) (conj(z)) #if 1 - #define __Pyx_c_abs(z) (cabs(z)) - #define __Pyx_c_pow(a, b) (cpow(a, b)) + #define __Pyx_c_abs_double(z) (cabs(z)) + #define __Pyx_c_pow_double(a, b) (cpow(a, b)) #endif #endif #else - static CYTHON_INLINE int __Pyx_c_eq(__pyx_t_double_complex, __pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum(__pyx_t_double_complex, __pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff(__pyx_t_double_complex, __pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_prod(__pyx_t_double_complex, __pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot(__pyx_t_double_complex, __pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg(__pyx_t_double_complex); - static CYTHON_INLINE int __Pyx_c_is_zero(__pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj(__pyx_t_double_complex); + static CYTHON_INLINE int __Pyx_c_eq_double(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum_double(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff_double(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_prod_double(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot_double(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg_double(__pyx_t_double_complex); + static CYTHON_INLINE int __Pyx_c_is_zero_double(__pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj_double(__pyx_t_double_complex); #if 1 - static CYTHON_INLINE double __Pyx_c_abs(__pyx_t_double_complex); - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow(__pyx_t_double_complex, __pyx_t_double_complex); + static CYTHON_INLINE double __Pyx_c_abs_double(__pyx_t_double_complex); + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow_double(__pyx_t_double_complex, __pyx_t_double_complex); #endif #endif +/* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_enum__NPY_TYPES(enum NPY_TYPES value); +/* CIntFromPy.proto */ +static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *); + +/* CIntToPy.proto */ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value); +/* CIntFromPy.proto */ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *); +/* FastTypeChecks.proto */ +#if CYTHON_COMPILING_IN_CPYTHON +#define __Pyx_TypeCheck(obj, type) __Pyx_IsSubtype(Py_TYPE(obj), (PyTypeObject *)type) +static CYTHON_INLINE int __Pyx_IsSubtype(PyTypeObject *a, PyTypeObject *b); +static CYTHON_INLINE int __Pyx_PyErr_GivenExceptionMatches(PyObject *err, PyObject *type); +static CYTHON_INLINE int __Pyx_PyErr_GivenExceptionMatches2(PyObject *err, PyObject *type1, PyObject *type2); +#else +#define __Pyx_TypeCheck(obj, type) PyObject_TypeCheck(obj, (PyTypeObject *)type) +#define __Pyx_PyErr_GivenExceptionMatches(err, type) PyErr_GivenExceptionMatches(err, type) +#define __Pyx_PyErr_GivenExceptionMatches2(err, type1, type2) (PyErr_GivenExceptionMatches(err, type1) || PyErr_GivenExceptionMatches(err, type2)) +#endif +#define __Pyx_PyException_Check(obj) __Pyx_TypeCheck(obj, PyExc_Exception) + +/* CheckBinaryVersion.proto */ static int __Pyx_check_binary_version(void); -#if !defined(__Pyx_PyIdentifier_FromString) -#if PY_MAJOR_VERSION < 3 - #define __Pyx_PyIdentifier_FromString(s) PyString_FromString(s) -#else - #define __Pyx_PyIdentifier_FromString(s) PyUnicode_FromString(s) -#endif -#endif - -static PyObject *__Pyx_ImportModule(const char *name); - -static PyTypeObject *__Pyx_ImportType(const char *module_name, const char *class_name, size_t size, int strict); - +/* InitStrings.proto */ static int __Pyx_InitStrings(__Pyx_StringTabEntry *t); @@ -1154,8 +1681,6 @@ static PyTypeObject *__pyx_ptype_7cpython_7complex_complex = 0; /* Module declarations from 'cpython.ref' */ -/* Module declarations from 'libc.stdlib' */ - /* Module declarations from 'numpy' */ /* Module declarations from 'numpy' */ @@ -1171,6 +1696,7 @@ static CYTHON_INLINE char *__pyx_f_5numpy__util_dtypestring(PyArray_Descr *, cha /* Module declarations from 'GPy.util.linalg_cython' */ static __Pyx_TypeInfo __Pyx_TypeInfo_double = { "double", NULL, sizeof(double), { 0 }, 0, 'R', 0, 0 }; #define __Pyx_MODULE_NAME "GPy.util.linalg_cython" +extern int __pyx_module_is_main_GPy__util__linalg_cython; int __pyx_module_is_main_GPy__util__linalg_cython = 0; /* Implementation of 'GPy.util.linalg_cython' */ @@ -1178,51 +1704,44 @@ static PyObject *__pyx_builtin_xrange; static PyObject *__pyx_builtin_ValueError; static PyObject *__pyx_builtin_range; static PyObject *__pyx_builtin_RuntimeError; -static char __pyx_k_A[] = "A"; -static char __pyx_k_B[] = "B"; -static char __pyx_k_H[] = "H"; -static char __pyx_k_I[] = "I"; -static char __pyx_k_L[] = "L"; -static char __pyx_k_N[] = "N"; -static char __pyx_k_O[] = "O"; -static char __pyx_k_Q[] = "Q"; -static char __pyx_k_b[] = "b"; -static char __pyx_k_c[] = "c"; -static char __pyx_k_d[] = "d"; -static char __pyx_k_f[] = "f"; -static char __pyx_k_g[] = "g"; -static char __pyx_k_h[] = "h"; -static char __pyx_k_i[] = "i"; -static char __pyx_k_j[] = "j"; -static char __pyx_k_l[] = "l"; -static char __pyx_k_q[] = "q"; -static char __pyx_k_r[] = "r"; -static char __pyx_k_s[] = "s"; -static char __pyx_k_x[] = "x"; -static char __pyx_k_Zd[] = "Zd"; -static char __pyx_k_Zf[] = "Zf"; -static char __pyx_k_Zg[] = "Zg"; -static char __pyx_k_main[] = "__main__"; -static char __pyx_k_test[] = "__test__"; -static char __pyx_k_range[] = "range"; -static char __pyx_k_upper[] = "upper"; -static char __pyx_k_xrange[] = "xrange"; -static char __pyx_k_ValueError[] = "ValueError"; -static char __pyx_k_cholupdate[] = "cholupdate"; -static char __pyx_k_symmetrify[] = "symmetrify"; -static char __pyx_k_RuntimeError[] = "RuntimeError"; -static char __pyx_k_GPy_util_linalg_cython[] = "GPy.util.linalg_cython"; -static char __pyx_k_ndarray_is_not_C_contiguous[] = "ndarray is not C contiguous"; -static char __pyx_k_home_david_gits_GPy_GPy_util_li[] = "/home/david/gits/GPy/GPy/util/linalg_cython.pyx"; -static char __pyx_k_unknown_dtype_code_in_numpy_pxd[] = "unknown dtype code in numpy.pxd (%d)"; -static char __pyx_k_Format_string_allocated_too_shor[] = "Format string allocated too short, see comment in numpy.pxd"; -static char __pyx_k_Non_native_byte_order_not_suppor[] = "Non-native byte order not supported"; -static char __pyx_k_ndarray_is_not_Fortran_contiguou[] = "ndarray is not Fortran contiguous"; -static char __pyx_k_Format_string_allocated_too_shor_2[] = "Format string allocated too short."; +static PyObject *__pyx_builtin_ImportError; +static const char __pyx_k_A[] = "A"; +static const char __pyx_k_L[] = "L"; +static const char __pyx_k_N[] = "N"; +static const char __pyx_k_c[] = "c"; +static const char __pyx_k_i[] = "i"; +static const char __pyx_k_j[] = "j"; +static const char __pyx_k_r[] = "r"; +static const char __pyx_k_s[] = "s"; +static const char __pyx_k_x[] = "x"; +static const char __pyx_k_main[] = "__main__"; +static const char __pyx_k_name[] = "__name__"; +static const char __pyx_k_test[] = "__test__"; +static const char __pyx_k_range[] = "range"; +static const char __pyx_k_upper[] = "upper"; +static const char __pyx_k_xrange[] = "xrange"; +static const char __pyx_k_ValueError[] = "ValueError"; +static const char __pyx_k_cholupdate[] = "cholupdate"; +static const char __pyx_k_symmetrify[] = "symmetrify"; +static const char __pyx_k_ImportError[] = "ImportError"; +static const char __pyx_k_RuntimeError[] = "RuntimeError"; +static const char __pyx_k_cline_in_traceback[] = "cline_in_traceback"; +static const char __pyx_k_GPy_util_linalg_cython[] = "GPy.util.linalg_cython"; +static const char __pyx_k_GPy_util_linalg_cython_pyx[] = "GPy/util/linalg_cython.pyx"; +static const char __pyx_k_ndarray_is_not_C_contiguous[] = "ndarray is not C contiguous"; +static const char __pyx_k_numpy_core_multiarray_failed_to[] = "numpy.core.multiarray failed to import"; +static const char __pyx_k_unknown_dtype_code_in_numpy_pxd[] = "unknown dtype code in numpy.pxd (%d)"; +static const char __pyx_k_Format_string_allocated_too_shor[] = "Format string allocated too short, see comment in numpy.pxd"; +static const char __pyx_k_Non_native_byte_order_not_suppor[] = "Non-native byte order not supported"; +static const char __pyx_k_ndarray_is_not_Fortran_contiguou[] = "ndarray is not Fortran contiguous"; +static const char __pyx_k_numpy_core_umath_failed_to_impor[] = "numpy.core.umath failed to import"; +static const char __pyx_k_Format_string_allocated_too_shor_2[] = "Format string allocated too short."; static PyObject *__pyx_n_s_A; static PyObject *__pyx_kp_u_Format_string_allocated_too_shor; static PyObject *__pyx_kp_u_Format_string_allocated_too_shor_2; static PyObject *__pyx_n_s_GPy_util_linalg_cython; +static PyObject *__pyx_kp_s_GPy_util_linalg_cython_pyx; +static PyObject *__pyx_n_s_ImportError; static PyObject *__pyx_n_s_L; static PyObject *__pyx_n_s_N; static PyObject *__pyx_kp_u_Non_native_byte_order_not_suppor; @@ -1230,12 +1749,15 @@ static PyObject *__pyx_n_s_RuntimeError; static PyObject *__pyx_n_s_ValueError; static PyObject *__pyx_n_s_c; static PyObject *__pyx_n_s_cholupdate; -static PyObject *__pyx_kp_s_home_david_gits_GPy_GPy_util_li; +static PyObject *__pyx_n_s_cline_in_traceback; static PyObject *__pyx_n_s_i; static PyObject *__pyx_n_s_j; static PyObject *__pyx_n_s_main; +static PyObject *__pyx_n_s_name; static PyObject *__pyx_kp_u_ndarray_is_not_C_contiguous; static PyObject *__pyx_kp_u_ndarray_is_not_Fortran_contiguou; +static PyObject *__pyx_kp_s_numpy_core_multiarray_failed_to; +static PyObject *__pyx_kp_s_numpy_core_umath_failed_to_impor; static PyObject *__pyx_n_s_r; static PyObject *__pyx_n_s_range; static PyObject *__pyx_n_s_s; @@ -1256,9 +1778,11 @@ static PyObject *__pyx_tuple__4; static PyObject *__pyx_tuple__5; static PyObject *__pyx_tuple__6; static PyObject *__pyx_tuple__7; -static PyObject *__pyx_tuple__9; -static PyObject *__pyx_codeobj__8; -static PyObject *__pyx_codeobj__10; +static PyObject *__pyx_tuple__8; +static PyObject *__pyx_tuple__10; +static PyObject *__pyx_codeobj__9; +static PyObject *__pyx_codeobj__11; +/* Late includes */ /* "GPy/util/linalg_cython.pyx":9 * @cython.wraparound(False) @@ -1270,13 +1794,10 @@ static PyObject *__pyx_codeobj__10; /* Python wrapper */ static PyObject *__pyx_pw_3GPy_4util_13linalg_cython_1symmetrify(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds); /*proto*/ -static PyMethodDef __pyx_mdef_3GPy_4util_13linalg_cython_1symmetrify = {"symmetrify", (PyCFunction)__pyx_pw_3GPy_4util_13linalg_cython_1symmetrify, METH_VARARGS|METH_KEYWORDS, 0}; +static PyMethodDef __pyx_mdef_3GPy_4util_13linalg_cython_1symmetrify = {"symmetrify", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_4util_13linalg_cython_1symmetrify, METH_VARARGS|METH_KEYWORDS, 0}; static PyObject *__pyx_pw_3GPy_4util_13linalg_cython_1symmetrify(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds) { PyArrayObject *__pyx_v_A = 0; PyBoolObject *__pyx_v_upper = 0; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; PyObject *__pyx_r = 0; __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("symmetrify (wrapper)", 0); @@ -1288,23 +1809,26 @@ static PyObject *__pyx_pw_3GPy_4util_13linalg_cython_1symmetrify(PyObject *__pyx const Py_ssize_t pos_args = PyTuple_GET_SIZE(__pyx_args); switch (pos_args) { case 2: values[1] = PyTuple_GET_ITEM(__pyx_args, 1); + CYTHON_FALLTHROUGH; case 1: values[0] = PyTuple_GET_ITEM(__pyx_args, 0); + CYTHON_FALLTHROUGH; case 0: break; default: goto __pyx_L5_argtuple_error; } kw_args = PyDict_Size(__pyx_kwds); switch (pos_args) { case 0: - if (likely((values[0] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_A)) != 0)) kw_args--; + if (likely((values[0] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_A)) != 0)) kw_args--; else goto __pyx_L5_argtuple_error; + CYTHON_FALLTHROUGH; case 1: - if (likely((values[1] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_upper)) != 0)) kw_args--; + if (likely((values[1] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_upper)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("symmetrify", 1, 2, 2, 1); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 9; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("symmetrify", 1, 2, 2, 1); __PYX_ERR(0, 9, __pyx_L3_error) } } if (unlikely(kw_args > 0)) { - if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "symmetrify") < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 9; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "symmetrify") < 0)) __PYX_ERR(0, 9, __pyx_L3_error) } } else if (PyTuple_GET_SIZE(__pyx_args) != 2) { goto __pyx_L5_argtuple_error; @@ -1317,14 +1841,14 @@ static PyObject *__pyx_pw_3GPy_4util_13linalg_cython_1symmetrify(PyObject *__pyx } goto __pyx_L4_argument_unpacking_done; __pyx_L5_argtuple_error:; - __Pyx_RaiseArgtupleInvalid("symmetrify", 1, 2, 2, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 9; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("symmetrify", 1, 2, 2, PyTuple_GET_SIZE(__pyx_args)); __PYX_ERR(0, 9, __pyx_L3_error) __pyx_L3_error:; __Pyx_AddTraceback("GPy.util.linalg_cython.symmetrify", __pyx_clineno, __pyx_lineno, __pyx_filename); __Pyx_RefNannyFinishContext(); return NULL; __pyx_L4_argument_unpacking_done:; - if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_A), __pyx_ptype_5numpy_ndarray, 1, "A", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 9; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_upper), __pyx_ptype_7cpython_4bool_bool, 1, "upper", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 9; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_A), __pyx_ptype_5numpy_ndarray, 1, "A", 0))) __PYX_ERR(0, 9, __pyx_L1_error) + if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_upper), __pyx_ptype_7cpython_4bool_bool, 1, "upper", 0))) __PYX_ERR(0, 9, __pyx_L1_error) __pyx_r = __pyx_pf_3GPy_4util_13linalg_cython_symmetrify(__pyx_self, __pyx_v_A, __pyx_v_upper); /* function exit code */ @@ -1350,17 +1874,16 @@ static PyObject *__pyx_pf_3GPy_4util_13linalg_cython_symmetrify(CYTHON_UNUSED Py int __pyx_t_4; int __pyx_t_5; int __pyx_t_6; - Py_ssize_t __pyx_t_7; - Py_ssize_t __pyx_t_8; + int __pyx_t_7; + int __pyx_t_8; Py_ssize_t __pyx_t_9; Py_ssize_t __pyx_t_10; Py_ssize_t __pyx_t_11; Py_ssize_t __pyx_t_12; Py_ssize_t __pyx_t_13; Py_ssize_t __pyx_t_14; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; + Py_ssize_t __pyx_t_15; + Py_ssize_t __pyx_t_16; __Pyx_RefNannySetupContext("symmetrify", 0); __pyx_pybuffer_A.pybuffer.buf = NULL; __pyx_pybuffer_A.refcount = 0; @@ -1368,7 +1891,7 @@ static PyObject *__pyx_pf_3GPy_4util_13linalg_cython_symmetrify(CYTHON_UNUSED Py __pyx_pybuffernd_A.rcbuffer = &__pyx_pybuffer_A; { __Pyx_BufFmt_StackElem __pyx_stack[1]; - if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_A.rcbuffer->pybuffer, (PyObject*)__pyx_v_A, &__Pyx_TypeInfo_double, PyBUF_FORMAT| PyBUF_STRIDES| PyBUF_WRITABLE, 2, 0, __pyx_stack) == -1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 9; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(__Pyx_GetBufferAndValidate(&__pyx_pybuffernd_A.rcbuffer->pybuffer, (PyObject*)__pyx_v_A, &__Pyx_TypeInfo_double, PyBUF_FORMAT| PyBUF_STRIDES| PyBUF_WRITABLE, 2, 0, __pyx_stack) == -1)) __PYX_ERR(0, 9, __pyx_L1_error) } __pyx_pybuffernd_A.diminfo[0].strides = __pyx_pybuffernd_A.rcbuffer->pybuffer.strides[0]; __pyx_pybuffernd_A.diminfo[0].shape = __pyx_pybuffernd_A.rcbuffer->pybuffer.shape[0]; __pyx_pybuffernd_A.diminfo[1].strides = __pyx_pybuffernd_A.rcbuffer->pybuffer.strides[1]; __pyx_pybuffernd_A.diminfo[1].shape = __pyx_pybuffernd_A.rcbuffer->pybuffer.shape[1]; @@ -1388,7 +1911,7 @@ static PyObject *__pyx_pf_3GPy_4util_13linalg_cython_symmetrify(CYTHON_UNUSED Py * for i in xrange(N): * for j in xrange(i): */ - __pyx_t_1 = __Pyx_PyObject_IsTrue(((PyObject *)__pyx_v_upper)); if (unlikely(__pyx_t_1 < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 11; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_PyObject_IsTrue(((PyObject *)__pyx_v_upper)); if (unlikely(__pyx_t_1 < 0)) __PYX_ERR(0, 11, __pyx_L1_error) __pyx_t_2 = ((!__pyx_t_1) != 0); if (__pyx_t_2) { @@ -1400,8 +1923,9 @@ static PyObject *__pyx_pf_3GPy_4util_13linalg_cython_symmetrify(CYTHON_UNUSED Py * A[j, i] = A[i, j] */ __pyx_t_3 = __pyx_v_N; - for (__pyx_t_4 = 0; __pyx_t_4 < __pyx_t_3; __pyx_t_4+=1) { - __pyx_v_i = __pyx_t_4; + __pyx_t_4 = __pyx_t_3; + for (__pyx_t_5 = 0; __pyx_t_5 < __pyx_t_4; __pyx_t_5+=1) { + __pyx_v_i = __pyx_t_5; /* "GPy/util/linalg_cython.pyx":13 * if not upper: @@ -1410,9 +1934,10 @@ static PyObject *__pyx_pf_3GPy_4util_13linalg_cython_symmetrify(CYTHON_UNUSED Py * A[j, i] = A[i, j] * else: */ - __pyx_t_5 = __pyx_v_i; - for (__pyx_t_6 = 0; __pyx_t_6 < __pyx_t_5; __pyx_t_6+=1) { - __pyx_v_j = __pyx_t_6; + __pyx_t_6 = __pyx_v_i; + __pyx_t_7 = __pyx_t_6; + for (__pyx_t_8 = 0; __pyx_t_8 < __pyx_t_7; __pyx_t_8+=1) { + __pyx_v_j = __pyx_t_8; /* "GPy/util/linalg_cython.pyx":14 * for i in xrange(N): @@ -1421,11 +1946,11 @@ static PyObject *__pyx_pf_3GPy_4util_13linalg_cython_symmetrify(CYTHON_UNUSED Py * else: * for j in xrange(N): */ - __pyx_t_7 = __pyx_v_i; - __pyx_t_8 = __pyx_v_j; - __pyx_t_9 = __pyx_v_j; - __pyx_t_10 = __pyx_v_i; - *__Pyx_BufPtrStrided2d(double *, __pyx_pybuffernd_A.rcbuffer->pybuffer.buf, __pyx_t_9, __pyx_pybuffernd_A.diminfo[0].strides, __pyx_t_10, __pyx_pybuffernd_A.diminfo[1].strides) = (*__Pyx_BufPtrStrided2d(double *, __pyx_pybuffernd_A.rcbuffer->pybuffer.buf, __pyx_t_7, __pyx_pybuffernd_A.diminfo[0].strides, __pyx_t_8, __pyx_pybuffernd_A.diminfo[1].strides)); + __pyx_t_9 = __pyx_v_i; + __pyx_t_10 = __pyx_v_j; + __pyx_t_11 = __pyx_v_j; + __pyx_t_12 = __pyx_v_i; + *__Pyx_BufPtrStrided2d(double *, __pyx_pybuffernd_A.rcbuffer->pybuffer.buf, __pyx_t_11, __pyx_pybuffernd_A.diminfo[0].strides, __pyx_t_12, __pyx_pybuffernd_A.diminfo[1].strides) = (*__Pyx_BufPtrStrided2d(double *, __pyx_pybuffernd_A.rcbuffer->pybuffer.buf, __pyx_t_9, __pyx_pybuffernd_A.diminfo[0].strides, __pyx_t_10, __pyx_pybuffernd_A.diminfo[1].strides)); } } @@ -1448,8 +1973,9 @@ static PyObject *__pyx_pf_3GPy_4util_13linalg_cython_symmetrify(CYTHON_UNUSED Py */ /*else*/ { __pyx_t_3 = __pyx_v_N; - for (__pyx_t_4 = 0; __pyx_t_4 < __pyx_t_3; __pyx_t_4+=1) { - __pyx_v_j = __pyx_t_4; + __pyx_t_4 = __pyx_t_3; + for (__pyx_t_5 = 0; __pyx_t_5 < __pyx_t_4; __pyx_t_5+=1) { + __pyx_v_j = __pyx_t_5; /* "GPy/util/linalg_cython.pyx":17 * else: @@ -1458,9 +1984,10 @@ static PyObject *__pyx_pf_3GPy_4util_13linalg_cython_symmetrify(CYTHON_UNUSED Py * A[j, i] = A[i, j] * */ - __pyx_t_5 = __pyx_v_j; - for (__pyx_t_6 = 0; __pyx_t_6 < __pyx_t_5; __pyx_t_6+=1) { - __pyx_v_i = __pyx_t_6; + __pyx_t_6 = __pyx_v_j; + __pyx_t_7 = __pyx_t_6; + for (__pyx_t_8 = 0; __pyx_t_8 < __pyx_t_7; __pyx_t_8+=1) { + __pyx_v_i = __pyx_t_8; /* "GPy/util/linalg_cython.pyx":18 * for j in xrange(N): @@ -1469,11 +1996,11 @@ static PyObject *__pyx_pf_3GPy_4util_13linalg_cython_symmetrify(CYTHON_UNUSED Py * * @cython.boundscheck(False) */ - __pyx_t_11 = __pyx_v_i; - __pyx_t_12 = __pyx_v_j; - __pyx_t_13 = __pyx_v_j; - __pyx_t_14 = __pyx_v_i; - *__Pyx_BufPtrStrided2d(double *, __pyx_pybuffernd_A.rcbuffer->pybuffer.buf, __pyx_t_13, __pyx_pybuffernd_A.diminfo[0].strides, __pyx_t_14, __pyx_pybuffernd_A.diminfo[1].strides) = (*__Pyx_BufPtrStrided2d(double *, __pyx_pybuffernd_A.rcbuffer->pybuffer.buf, __pyx_t_11, __pyx_pybuffernd_A.diminfo[0].strides, __pyx_t_12, __pyx_pybuffernd_A.diminfo[1].strides)); + __pyx_t_13 = __pyx_v_i; + __pyx_t_14 = __pyx_v_j; + __pyx_t_15 = __pyx_v_j; + __pyx_t_16 = __pyx_v_i; + *__Pyx_BufPtrStrided2d(double *, __pyx_pybuffernd_A.rcbuffer->pybuffer.buf, __pyx_t_15, __pyx_pybuffernd_A.diminfo[0].strides, __pyx_t_16, __pyx_pybuffernd_A.diminfo[1].strides) = (*__Pyx_BufPtrStrided2d(double *, __pyx_pybuffernd_A.rcbuffer->pybuffer.buf, __pyx_t_13, __pyx_pybuffernd_A.diminfo[0].strides, __pyx_t_14, __pyx_pybuffernd_A.diminfo[1].strides)); } } } @@ -1492,6 +2019,8 @@ static PyObject *__pyx_pf_3GPy_4util_13linalg_cython_symmetrify(CYTHON_UNUSED Py goto __pyx_L0; __pyx_L1_error:; { PyObject *__pyx_type, *__pyx_value, *__pyx_tb; + __Pyx_PyThreadState_declare + __Pyx_PyThreadState_assign __Pyx_ErrFetch(&__pyx_type, &__pyx_value, &__pyx_tb); __Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_A.rcbuffer->pybuffer); __Pyx_ErrRestore(__pyx_type, __pyx_value, __pyx_tb);} @@ -1516,14 +2045,11 @@ static PyObject *__pyx_pf_3GPy_4util_13linalg_cython_symmetrify(CYTHON_UNUSED Py /* Python wrapper */ static PyObject *__pyx_pw_3GPy_4util_13linalg_cython_3cholupdate(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds); /*proto*/ -static PyMethodDef __pyx_mdef_3GPy_4util_13linalg_cython_3cholupdate = {"cholupdate", (PyCFunction)__pyx_pw_3GPy_4util_13linalg_cython_3cholupdate, METH_VARARGS|METH_KEYWORDS, 0}; +static PyMethodDef __pyx_mdef_3GPy_4util_13linalg_cython_3cholupdate = {"cholupdate", (PyCFunction)(void*)(PyCFunctionWithKeywords)__pyx_pw_3GPy_4util_13linalg_cython_3cholupdate, METH_VARARGS|METH_KEYWORDS, 0}; static PyObject *__pyx_pw_3GPy_4util_13linalg_cython_3cholupdate(PyObject *__pyx_self, PyObject *__pyx_args, PyObject *__pyx_kwds) { PyArrayObject *__pyx_v_x = 0; PyArrayObject *__pyx_v_L = 0; int __pyx_v_N; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; PyObject *__pyx_r = 0; __Pyx_RefNannyDeclarations __Pyx_RefNannySetupContext("cholupdate (wrapper)", 0); @@ -1535,29 +2061,34 @@ static PyObject *__pyx_pw_3GPy_4util_13linalg_cython_3cholupdate(PyObject *__pyx const Py_ssize_t pos_args = PyTuple_GET_SIZE(__pyx_args); switch (pos_args) { case 3: values[2] = PyTuple_GET_ITEM(__pyx_args, 2); + CYTHON_FALLTHROUGH; case 2: values[1] = PyTuple_GET_ITEM(__pyx_args, 1); + CYTHON_FALLTHROUGH; case 1: values[0] = PyTuple_GET_ITEM(__pyx_args, 0); + CYTHON_FALLTHROUGH; case 0: break; default: goto __pyx_L5_argtuple_error; } kw_args = PyDict_Size(__pyx_kwds); switch (pos_args) { case 0: - if (likely((values[0] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_x)) != 0)) kw_args--; + if (likely((values[0] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_x)) != 0)) kw_args--; else goto __pyx_L5_argtuple_error; + CYTHON_FALLTHROUGH; case 1: - if (likely((values[1] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_L)) != 0)) kw_args--; + if (likely((values[1] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_L)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("cholupdate", 1, 3, 3, 1); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 24; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("cholupdate", 1, 3, 3, 1); __PYX_ERR(0, 24, __pyx_L3_error) } + CYTHON_FALLTHROUGH; case 2: - if (likely((values[2] = PyDict_GetItem(__pyx_kwds, __pyx_n_s_N)) != 0)) kw_args--; + if (likely((values[2] = __Pyx_PyDict_GetItemStr(__pyx_kwds, __pyx_n_s_N)) != 0)) kw_args--; else { - __Pyx_RaiseArgtupleInvalid("cholupdate", 1, 3, 3, 2); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 24; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("cholupdate", 1, 3, 3, 2); __PYX_ERR(0, 24, __pyx_L3_error) } } if (unlikely(kw_args > 0)) { - if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "cholupdate") < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 24; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + if (unlikely(__Pyx_ParseOptionalKeywords(__pyx_kwds, __pyx_pyargnames, 0, values, pos_args, "cholupdate") < 0)) __PYX_ERR(0, 24, __pyx_L3_error) } } else if (PyTuple_GET_SIZE(__pyx_args) != 3) { goto __pyx_L5_argtuple_error; @@ -1568,18 +2099,18 @@ static PyObject *__pyx_pw_3GPy_4util_13linalg_cython_3cholupdate(PyObject *__pyx } __pyx_v_x = ((PyArrayObject *)values[0]); __pyx_v_L = ((PyArrayObject *)values[1]); - __pyx_v_N = __Pyx_PyInt_As_int(values[2]); if (unlikely((__pyx_v_N == (int)-1) && PyErr_Occurred())) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 24; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __pyx_v_N = __Pyx_PyInt_As_int(values[2]); if (unlikely((__pyx_v_N == (int)-1) && PyErr_Occurred())) __PYX_ERR(0, 24, __pyx_L3_error) } goto __pyx_L4_argument_unpacking_done; __pyx_L5_argtuple_error:; - __Pyx_RaiseArgtupleInvalid("cholupdate", 1, 3, 3, PyTuple_GET_SIZE(__pyx_args)); {__pyx_filename = __pyx_f[0]; __pyx_lineno = 24; __pyx_clineno = __LINE__; goto __pyx_L3_error;} + __Pyx_RaiseArgtupleInvalid("cholupdate", 1, 3, 3, PyTuple_GET_SIZE(__pyx_args)); __PYX_ERR(0, 24, __pyx_L3_error) __pyx_L3_error:; __Pyx_AddTraceback("GPy.util.linalg_cython.cholupdate", __pyx_clineno, __pyx_lineno, __pyx_filename); __Pyx_RefNannyFinishContext(); return NULL; __pyx_L4_argument_unpacking_done:; - if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_x), __pyx_ptype_5numpy_ndarray, 1, "x", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 24; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_L), __pyx_ptype_5numpy_ndarray, 1, "L", 0))) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 24; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_x), __pyx_ptype_5numpy_ndarray, 1, "x", 0))) __PYX_ERR(0, 24, __pyx_L1_error) + if (unlikely(!__Pyx_ArgTypeTest(((PyObject *)__pyx_v_L), __pyx_ptype_5numpy_ndarray, 1, "L", 0))) __PYX_ERR(0, 24, __pyx_L1_error) __pyx_r = __pyx_pf_3GPy_4util_13linalg_cython_2cholupdate(__pyx_self, __pyx_v_x, __pyx_v_L, __pyx_v_N); 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+ __pyx_t_9 = __pyx_v_j; + __pyx_v_r = sqrt((((*__Pyx_BufPtrStrided2d(double *, __pyx_pybuffernd_L.rcbuffer->pybuffer.buf, __pyx_t_4, __pyx_pybuffernd_L.diminfo[0].strides, __pyx_t_5, __pyx_pybuffernd_L.diminfo[1].strides)) * (*__Pyx_BufPtrStrided2d(double *, __pyx_pybuffernd_L.rcbuffer->pybuffer.buf, __pyx_t_6, __pyx_pybuffernd_L.diminfo[0].strides, __pyx_t_7, __pyx_pybuffernd_L.diminfo[1].strides))) + ((*__Pyx_BufPtrStrided1d(double *, __pyx_pybuffernd_x.rcbuffer->pybuffer.buf, __pyx_t_8, __pyx_pybuffernd_x.diminfo[0].strides)) * (*__Pyx_BufPtrStrided1d(double *, __pyx_pybuffernd_x.rcbuffer->pybuffer.buf, __pyx_t_9, __pyx_pybuffernd_x.diminfo[0].strides))))); /* "GPy/util/linalg_cython.pyx":31 * for j in xrange(N): @@ -1701,9 +2233,9 @@ static PyObject *__pyx_pf_3GPy_4util_13linalg_cython_2cholupdate(CYTHON_UNUSED P * s = x[j] / L[j, j] * L[j, j] = r */ - __pyx_t_9 = __pyx_v_j; __pyx_t_10 = __pyx_v_j; - __pyx_v_c = (__pyx_v_r / (*__Pyx_BufPtrStrided2d(double *, __pyx_pybuffernd_L.rcbuffer->pybuffer.buf, __pyx_t_9, __pyx_pybuffernd_L.diminfo[0].strides, __pyx_t_10, __pyx_pybuffernd_L.diminfo[1].strides))); + __pyx_t_11 = __pyx_v_j; + __pyx_v_c = (__pyx_v_r / (*__Pyx_BufPtrStrided2d(double *, __pyx_pybuffernd_L.rcbuffer->pybuffer.buf, __pyx_t_10, __pyx_pybuffernd_L.diminfo[0].strides, __pyx_t_11, __pyx_pybuffernd_L.diminfo[1].strides))); /* "GPy/util/linalg_cython.pyx":32 * r = sqrt(L[j, j] * L[j, j] + x[j] * x[j]) @@ -1712,10 +2244,10 @@ static PyObject *__pyx_pf_3GPy_4util_13linalg_cython_2cholupdate(CYTHON_UNUSED P * L[j, j] = r * for i in xrange(j): */ - __pyx_t_11 = __pyx_v_j; __pyx_t_12 = __pyx_v_j; __pyx_t_13 = __pyx_v_j; - __pyx_v_s = ((*__Pyx_BufPtrStrided1d(double *, __pyx_pybuffernd_x.rcbuffer->pybuffer.buf, __pyx_t_11, __pyx_pybuffernd_x.diminfo[0].strides)) / (*__Pyx_BufPtrStrided2d(double *, __pyx_pybuffernd_L.rcbuffer->pybuffer.buf, __pyx_t_12, __pyx_pybuffernd_L.diminfo[0].strides, __pyx_t_13, __pyx_pybuffernd_L.diminfo[1].strides))); + __pyx_t_14 = __pyx_v_j; + __pyx_v_s = ((*__Pyx_BufPtrStrided1d(double *, __pyx_pybuffernd_x.rcbuffer->pybuffer.buf, __pyx_t_12, __pyx_pybuffernd_x.diminfo[0].strides)) / (*__Pyx_BufPtrStrided2d(double *, __pyx_pybuffernd_L.rcbuffer->pybuffer.buf, __pyx_t_13, __pyx_pybuffernd_L.diminfo[0].strides, __pyx_t_14, __pyx_pybuffernd_L.diminfo[1].strides))); /* "GPy/util/linalg_cython.pyx":33 * c = r / L[j, j] @@ -1724,9 +2256,9 @@ static PyObject *__pyx_pf_3GPy_4util_13linalg_cython_2cholupdate(CYTHON_UNUSED P * for i in xrange(j): * L[i, j] = (L[i, j] + s * x[i]) / c */ - __pyx_t_14 = __pyx_v_j; __pyx_t_15 = __pyx_v_j; - *__Pyx_BufPtrStrided2d(double *, __pyx_pybuffernd_L.rcbuffer->pybuffer.buf, __pyx_t_14, __pyx_pybuffernd_L.diminfo[0].strides, __pyx_t_15, __pyx_pybuffernd_L.diminfo[1].strides) = __pyx_v_r; + __pyx_t_16 = __pyx_v_j; + *__Pyx_BufPtrStrided2d(double *, __pyx_pybuffernd_L.rcbuffer->pybuffer.buf, __pyx_t_15, __pyx_pybuffernd_L.diminfo[0].strides, __pyx_t_16, __pyx_pybuffernd_L.diminfo[1].strides) = __pyx_v_r; /* "GPy/util/linalg_cython.pyx":34 * s = x[j] / L[j, j] @@ -1735,9 +2267,10 @@ static PyObject *__pyx_pf_3GPy_4util_13linalg_cython_2cholupdate(CYTHON_UNUSED P * L[i, j] = (L[i, j] + s * x[i]) / c * x[i] = c * x[i] - s * L[i, j] */ - __pyx_t_16 = __pyx_v_j; - for (__pyx_t_17 = 0; __pyx_t_17 < __pyx_t_16; __pyx_t_17+=1) { - __pyx_v_i = __pyx_t_17; + __pyx_t_17 = __pyx_v_j; + __pyx_t_18 = __pyx_t_17; + for (__pyx_t_19 = 0; __pyx_t_19 < __pyx_t_18; __pyx_t_19+=1) { + __pyx_v_i = __pyx_t_19; /* "GPy/util/linalg_cython.pyx":35 * L[j, j] = r @@ -1746,12 +2279,12 @@ static PyObject *__pyx_pf_3GPy_4util_13linalg_cython_2cholupdate(CYTHON_UNUSED P * x[i] = c * x[i] - s * L[i, j] * r = sqrt(L[j, j]) */ - __pyx_t_18 = __pyx_v_i; - __pyx_t_19 = __pyx_v_j; __pyx_t_20 = __pyx_v_i; - __pyx_t_21 = __pyx_v_i; - __pyx_t_22 = __pyx_v_j; - *__Pyx_BufPtrStrided2d(double *, __pyx_pybuffernd_L.rcbuffer->pybuffer.buf, __pyx_t_21, __pyx_pybuffernd_L.diminfo[0].strides, __pyx_t_22, __pyx_pybuffernd_L.diminfo[1].strides) = (((*__Pyx_BufPtrStrided2d(double *, __pyx_pybuffernd_L.rcbuffer->pybuffer.buf, __pyx_t_18, __pyx_pybuffernd_L.diminfo[0].strides, __pyx_t_19, __pyx_pybuffernd_L.diminfo[1].strides)) + (__pyx_v_s * (*__Pyx_BufPtrStrided1d(double *, __pyx_pybuffernd_x.rcbuffer->pybuffer.buf, __pyx_t_20, __pyx_pybuffernd_x.diminfo[0].strides)))) / __pyx_v_c); + __pyx_t_21 = __pyx_v_j; + __pyx_t_22 = __pyx_v_i; + __pyx_t_23 = __pyx_v_i; + __pyx_t_24 = __pyx_v_j; + *__Pyx_BufPtrStrided2d(double *, __pyx_pybuffernd_L.rcbuffer->pybuffer.buf, __pyx_t_23, __pyx_pybuffernd_L.diminfo[0].strides, __pyx_t_24, __pyx_pybuffernd_L.diminfo[1].strides) = (((*__Pyx_BufPtrStrided2d(double *, __pyx_pybuffernd_L.rcbuffer->pybuffer.buf, __pyx_t_20, __pyx_pybuffernd_L.diminfo[0].strides, __pyx_t_21, __pyx_pybuffernd_L.diminfo[1].strides)) + (__pyx_v_s * (*__Pyx_BufPtrStrided1d(double *, __pyx_pybuffernd_x.rcbuffer->pybuffer.buf, __pyx_t_22, __pyx_pybuffernd_x.diminfo[0].strides)))) / __pyx_v_c); /* "GPy/util/linalg_cython.pyx":36 * for i in xrange(j): @@ -1759,11 +2292,11 @@ static PyObject *__pyx_pf_3GPy_4util_13linalg_cython_2cholupdate(CYTHON_UNUSED P * x[i] = c * x[i] - s * L[i, j] # <<<<<<<<<<<<<< * r = sqrt(L[j, j]) */ - __pyx_t_23 = __pyx_v_i; - __pyx_t_24 = __pyx_v_i; - __pyx_t_25 = __pyx_v_j; + __pyx_t_25 = __pyx_v_i; __pyx_t_26 = __pyx_v_i; - *__Pyx_BufPtrStrided1d(double *, __pyx_pybuffernd_x.rcbuffer->pybuffer.buf, __pyx_t_26, __pyx_pybuffernd_x.diminfo[0].strides) = ((__pyx_v_c * (*__Pyx_BufPtrStrided1d(double *, __pyx_pybuffernd_x.rcbuffer->pybuffer.buf, __pyx_t_23, __pyx_pybuffernd_x.diminfo[0].strides))) - (__pyx_v_s * (*__Pyx_BufPtrStrided2d(double *, __pyx_pybuffernd_L.rcbuffer->pybuffer.buf, __pyx_t_24, __pyx_pybuffernd_L.diminfo[0].strides, __pyx_t_25, __pyx_pybuffernd_L.diminfo[1].strides)))); + __pyx_t_27 = __pyx_v_j; + __pyx_t_28 = __pyx_v_i; + *__Pyx_BufPtrStrided1d(double *, __pyx_pybuffernd_x.rcbuffer->pybuffer.buf, __pyx_t_28, __pyx_pybuffernd_x.diminfo[0].strides) = ((__pyx_v_c * (*__Pyx_BufPtrStrided1d(double *, __pyx_pybuffernd_x.rcbuffer->pybuffer.buf, __pyx_t_25, __pyx_pybuffernd_x.diminfo[0].strides))) - (__pyx_v_s * (*__Pyx_BufPtrStrided2d(double *, __pyx_pybuffernd_L.rcbuffer->pybuffer.buf, __pyx_t_26, __pyx_pybuffernd_L.diminfo[0].strides, __pyx_t_27, __pyx_pybuffernd_L.diminfo[1].strides)))); } /* "GPy/util/linalg_cython.pyx":37 @@ -1771,9 +2304,9 @@ static PyObject *__pyx_pf_3GPy_4util_13linalg_cython_2cholupdate(CYTHON_UNUSED P * x[i] = c * x[i] - s * L[i, j] * r = sqrt(L[j, j]) # <<<<<<<<<<<<<< */ - __pyx_t_27 = __pyx_v_j; - __pyx_t_28 = __pyx_v_j; - __pyx_v_r = sqrt((*__Pyx_BufPtrStrided2d(double *, __pyx_pybuffernd_L.rcbuffer->pybuffer.buf, __pyx_t_27, __pyx_pybuffernd_L.diminfo[0].strides, __pyx_t_28, __pyx_pybuffernd_L.diminfo[1].strides))); + __pyx_t_29 = __pyx_v_j; + __pyx_t_30 = __pyx_v_j; + __pyx_v_r = sqrt((*__Pyx_BufPtrStrided2d(double *, __pyx_pybuffernd_L.rcbuffer->pybuffer.buf, __pyx_t_29, __pyx_pybuffernd_L.diminfo[0].strides, __pyx_t_30, __pyx_pybuffernd_L.diminfo[1].strides))); } } @@ -1787,6 +2320,7 @@ static PyObject *__pyx_pf_3GPy_4util_13linalg_cython_2cholupdate(CYTHON_UNUSED P /*finally:*/ { /*normal exit:*/{ #ifdef WITH_THREAD + __Pyx_FastGIL_Forget(); Py_BLOCK_THREADS #endif goto __pyx_L5; @@ -1808,6 +2342,8 @@ static PyObject *__pyx_pf_3GPy_4util_13linalg_cython_2cholupdate(CYTHON_UNUSED P goto __pyx_L0; __pyx_L1_error:; { PyObject *__pyx_type, *__pyx_value, *__pyx_tb; + __Pyx_PyThreadState_declare + __Pyx_PyThreadState_assign __Pyx_ErrFetch(&__pyx_type, &__pyx_value, &__pyx_tb); __Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_L.rcbuffer->pybuffer); __Pyx_SafeReleaseBuffer(&__pyx_pybuffernd_x.rcbuffer->pybuffer); @@ -1824,12 +2360,12 @@ static PyObject *__pyx_pf_3GPy_4util_13linalg_cython_2cholupdate(CYTHON_UNUSED P return __pyx_r; } -/* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":197 +/* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":258 * # experimental exception made for __getbuffer__ and __releasebuffer__ * # -- the details of this may change. * def __getbuffer__(ndarray self, Py_buffer* info, int flags): # <<<<<<<<<<<<<< * # This implementation of getbuffer is geared towards Cython - * # requirements, and does not yet fullfill the PEP. + * # requirements, and does not yet fulfill the PEP. */ /* Python wrapper */ @@ -1846,7 +2382,6 @@ static CYTHON_UNUSED int __pyx_pw_5numpy_7ndarray_1__getbuffer__(PyObject *__pyx } static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, Py_buffer *__pyx_v_info, int __pyx_v_flags) { - int __pyx_v_copy_shape; int __pyx_v_i; int __pyx_v_ndim; int __pyx_v_endian_detector; @@ -1855,7 +2390,6 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P char *__pyx_v_f; PyArray_Descr *__pyx_v_descr = 0; int __pyx_v_offset; - int __pyx_v_hasfields; int __pyx_r; __Pyx_RefNannyDeclarations int __pyx_t_1; @@ -1863,41 +2397,29 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P PyObject *__pyx_t_3 = NULL; int __pyx_t_4; int __pyx_t_5; - PyObject *__pyx_t_6 = NULL; - char *__pyx_t_7; - int __pyx_lineno = 0; - const char *__pyx_filename = NULL; - int __pyx_clineno = 0; + int __pyx_t_6; + PyArray_Descr *__pyx_t_7; + PyObject *__pyx_t_8 = NULL; + char *__pyx_t_9; + if (__pyx_v_info == NULL) { + PyErr_SetString(PyExc_BufferError, "PyObject_GetBuffer: view==NULL argument is obsolete"); + return -1; + } __Pyx_RefNannySetupContext("__getbuffer__", 0); - if (__pyx_v_info != NULL) { - __pyx_v_info->obj = Py_None; __Pyx_INCREF(Py_None); - __Pyx_GIVEREF(__pyx_v_info->obj); - } + __pyx_v_info->obj = Py_None; __Pyx_INCREF(Py_None); + __Pyx_GIVEREF(__pyx_v_info->obj); - /* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":203 - * # of flags + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":265 * - * if info == NULL: return # <<<<<<<<<<<<<< - * - * cdef int copy_shape, i, ndim - */ - __pyx_t_1 = ((__pyx_v_info == NULL) != 0); - if (__pyx_t_1) { - __pyx_r = 0; - goto __pyx_L0; - } - - /* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":206 - * - * cdef int copy_shape, i, ndim + * cdef int i, ndim * cdef int endian_detector = 1 # <<<<<<<<<<<<<< * cdef bint little_endian = ((&endian_detector)[0] != 0) * */ __pyx_v_endian_detector = 1; - /* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":207 - * cdef int copy_shape, i, ndim + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":266 + * cdef int i, ndim * cdef int endian_detector = 1 * cdef bint little_endian = ((&endian_detector)[0] != 0) # <<<<<<<<<<<<<< * @@ -1905,226 +2427,186 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ __pyx_v_little_endian = ((((char *)(&__pyx_v_endian_detector))[0]) != 0); - /* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":209 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":268 * cdef bint little_endian = ((&endian_detector)[0] != 0) * * ndim = PyArray_NDIM(self) # <<<<<<<<<<<<<< * - * if sizeof(npy_intp) != sizeof(Py_ssize_t): + * if ((flags & pybuf.PyBUF_C_CONTIGUOUS == pybuf.PyBUF_C_CONTIGUOUS) */ __pyx_v_ndim = PyArray_NDIM(__pyx_v_self); - /* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":211 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":270 * ndim = PyArray_NDIM(self) * - * if sizeof(npy_intp) != sizeof(Py_ssize_t): # <<<<<<<<<<<<<< - * copy_shape = 1 - * else: - */ - __pyx_t_1 = (((sizeof(npy_intp)) != (sizeof(Py_ssize_t))) != 0); - if (__pyx_t_1) { - - /* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":212 - * - * if sizeof(npy_intp) != sizeof(Py_ssize_t): - * copy_shape = 1 # <<<<<<<<<<<<<< - * else: - * copy_shape = 0 - */ - __pyx_v_copy_shape = 1; 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+ goto __pyx_L9; } - /* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":235 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":289 * info.shape[i] = PyArray_DIMS(self)[i] * else: * info.strides = PyArray_STRIDES(self) # <<<<<<<<<<<<<< @@ -2163,7 +2645,7 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P /*else*/ { __pyx_v_info->strides = ((Py_ssize_t *)PyArray_STRIDES(__pyx_v_self)); - /* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":236 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":290 * else: * info.strides = PyArray_STRIDES(self) * info.shape = PyArray_DIMS(self) # <<<<<<<<<<<<<< @@ -2172,9 +2654,9 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ __pyx_v_info->shape = ((Py_ssize_t *)PyArray_DIMS(__pyx_v_self)); 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+ __pyx_t_1 = ((!(PyDataType_HASFIELDS(__pyx_v_descr) != 0)) != 0); if (__pyx_t_1) { - /* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":256 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":303 * - * if not hasfields: + * if not PyDataType_HASFIELDS(descr): * t = descr.type_num # <<<<<<<<<<<<<< * if ((descr.byteorder == c'>' and little_endian) or * (descr.byteorder == c'<' and not little_endian)): @@ -2308,8 +2738,8 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P __pyx_t_4 = __pyx_v_descr->type_num; __pyx_v_t = __pyx_t_4; - /* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":257 - * if not hasfields: + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":304 + * if not PyDataType_HASFIELDS(descr): * t = descr.type_num * if ((descr.byteorder == c'>' and little_endian) or # <<<<<<<<<<<<<< * (descr.byteorder == c'<' and not little_endian)): @@ -2317,18 +2747,18 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ __pyx_t_2 = ((__pyx_v_descr->byteorder == '>') != 0); if (!__pyx_t_2) { - goto __pyx_L20_next_or; + goto __pyx_L15_next_or; } else { } __pyx_t_2 = (__pyx_v_little_endian != 0); if (!__pyx_t_2) { } else { __pyx_t_1 = __pyx_t_2; - goto __pyx_L19_bool_binop_done; + goto __pyx_L14_bool_binop_done; } - __pyx_L20_next_or:; + __pyx_L15_next_or:; - /* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":258 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":305 * t = descr.type_num * if ((descr.byteorder == c'>' and little_endian) or * (descr.byteorder == c'<' and not little_endian)): # <<<<<<<<<<<<<< @@ -2339,36 +2769,36 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P if (__pyx_t_2) { } else { __pyx_t_1 = __pyx_t_2; - goto __pyx_L19_bool_binop_done; + goto __pyx_L14_bool_binop_done; } __pyx_t_2 = ((!(__pyx_v_little_endian != 0)) != 0); __pyx_t_1 = __pyx_t_2; - __pyx_L19_bool_binop_done:; + __pyx_L14_bool_binop_done:; 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if (unlikely(!__pyx_t_3)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 259; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_3 = __Pyx_PyObject_Call(__pyx_builtin_ValueError, __pyx_tuple__3, NULL); if (unlikely(!__pyx_t_3)) __PYX_ERR(1, 306, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_3); __Pyx_Raise(__pyx_t_3, 0, 0, 0); __Pyx_DECREF(__pyx_t_3); __pyx_t_3 = 0; - {__pyx_filename = __pyx_f[1]; __pyx_lineno = 259; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __PYX_ERR(1, 306, __pyx_L1_error) - /* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":257 - * if not hasfields: + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":304 + * if not PyDataType_HASFIELDS(descr): * t = descr.type_num * if ((descr.byteorder == c'>' and little_endian) or # <<<<<<<<<<<<<< * (descr.byteorder == c'<' and not little_endian)): @@ -2376,7 +2806,7 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ } - /* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":260 + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":307 * (descr.byteorder == c'<' and not little_endian)): * raise ValueError(u"Non-native byte order not supported") * if t == NPY_BYTE: f = "b" # <<<<<<<<<<<<<< @@ -2385,213 +2815,208 @@ static int __pyx_pf_5numpy_7ndarray___getbuffer__(PyArrayObject *__pyx_v_self, P */ switch (__pyx_v_t) { case NPY_BYTE: - __pyx_v_f = __pyx_k_b; 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/*proto*/ +__Pyx_PyMODINIT_FUNC initlinalg_cython(void) +#else +__Pyx_PyMODINIT_FUNC PyInit_linalg_cython(void) CYTHON_SMALL_CODE; /*proto*/ +__Pyx_PyMODINIT_FUNC PyInit_linalg_cython(void) +#if CYTHON_PEP489_MULTI_PHASE_INIT +{ + return PyModuleDef_Init(&__pyx_moduledef); +} +static CYTHON_SMALL_CODE int __Pyx_check_single_interpreter(void) { + #if PY_VERSION_HEX >= 0x030700A1 + static PY_INT64_T main_interpreter_id = -1; + PY_INT64_T current_id = PyInterpreterState_GetID(PyThreadState_Get()->interp); + if (main_interpreter_id == -1) { + main_interpreter_id = current_id; + return (unlikely(current_id == -1)) ? -1 : 0; + } else if (unlikely(main_interpreter_id != current_id)) + #else + static PyInterpreterState *main_interpreter = NULL; + PyInterpreterState *current_interpreter = PyThreadState_Get()->interp; + if (!main_interpreter) { + main_interpreter = current_interpreter; + } else if (unlikely(main_interpreter != current_interpreter)) + #endif + { + PyErr_SetString( + PyExc_ImportError, + "Interpreter change detected - this module can only be loaded into one interpreter per process."); 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__pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyObject_SetAttr(__pyx_m, __pyx_n_s_name, __pyx_n_s_main) < 0) __PYX_ERR(0, 1, __pyx_L1_error) } #if PY_MAJOR_VERSION >= 3 { - PyObject *modules = PyImport_GetModuleDict(); if (unlikely(!modules)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + PyObject *modules = PyImport_GetModuleDict(); if (unlikely(!modules)) __PYX_ERR(0, 1, __pyx_L1_error) if (!PyDict_GetItemString(modules, "GPy.util.linalg_cython")) { - if (unlikely(PyDict_SetItemString(modules, "GPy.util.linalg_cython", __pyx_m) < 0)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (unlikely(PyDict_SetItemString(modules, "GPy.util.linalg_cython", __pyx_m) < 0)) __PYX_ERR(0, 1, __pyx_L1_error) } } #endif /*--- Builtin init code ---*/ - if (__Pyx_InitCachedBuiltins() < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (__Pyx_InitCachedBuiltins() < 0) __PYX_ERR(0, 1, __pyx_L1_error) /*--- Constants init code ---*/ - if (__Pyx_InitCachedConstants() < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - /*--- Global init code ---*/ - /*--- Variable export code ---*/ - /*--- Function export code ---*/ - /*--- Type init code ---*/ - /*--- Type import code ---*/ - __pyx_ptype_7cpython_4type_type = __Pyx_ImportType(__Pyx_BUILTIN_MODULE_NAME, "type", - #if CYTHON_COMPILING_IN_PYPY - sizeof(PyTypeObject), - #else - sizeof(PyHeapTypeObject), - #endif - 0); if (unlikely(!__pyx_ptype_7cpython_4type_type)) {__pyx_filename = __pyx_f[2]; __pyx_lineno = 9; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_ptype_7cpython_4bool_bool = __Pyx_ImportType(__Pyx_BUILTIN_MODULE_NAME, "bool", sizeof(PyBoolObject), 0); if (unlikely(!__pyx_ptype_7cpython_4bool_bool)) {__pyx_filename = __pyx_f[3]; __pyx_lineno = 8; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_ptype_7cpython_7complex_complex = __Pyx_ImportType(__Pyx_BUILTIN_MODULE_NAME, "complex", sizeof(PyComplexObject), 0); if (unlikely(!__pyx_ptype_7cpython_7complex_complex)) {__pyx_filename = __pyx_f[4]; __pyx_lineno = 15; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_ptype_5numpy_dtype = __Pyx_ImportType("numpy", "dtype", sizeof(PyArray_Descr), 0); if (unlikely(!__pyx_ptype_5numpy_dtype)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 155; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_ptype_5numpy_flatiter = __Pyx_ImportType("numpy", "flatiter", sizeof(PyArrayIterObject), 0); if (unlikely(!__pyx_ptype_5numpy_flatiter)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 168; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_ptype_5numpy_broadcast = __Pyx_ImportType("numpy", "broadcast", sizeof(PyArrayMultiIterObject), 0); if (unlikely(!__pyx_ptype_5numpy_broadcast)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 172; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_ptype_5numpy_ndarray = __Pyx_ImportType("numpy", "ndarray", sizeof(PyArrayObject), 0); if (unlikely(!__pyx_ptype_5numpy_ndarray)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 181; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - __pyx_ptype_5numpy_ufunc = __Pyx_ImportType("numpy", "ufunc", sizeof(PyUFuncObject), 0); if (unlikely(!__pyx_ptype_5numpy_ufunc)) {__pyx_filename = __pyx_f[1]; __pyx_lineno = 861; __pyx_clineno = __LINE__; goto __pyx_L1_error;} - /*--- Variable import code ---*/ - /*--- Function import code ---*/ + if (__Pyx_InitCachedConstants() < 0) __PYX_ERR(0, 1, __pyx_L1_error) + /*--- Global type/function init code ---*/ + (void)__Pyx_modinit_global_init_code(); + (void)__Pyx_modinit_variable_export_code(); + (void)__Pyx_modinit_function_export_code(); + (void)__Pyx_modinit_type_init_code(); + if (unlikely(__Pyx_modinit_type_import_code() != 0)) goto __pyx_L1_error; + (void)__Pyx_modinit_variable_import_code(); + (void)__Pyx_modinit_function_import_code(); /*--- Execution code ---*/ #if defined(__Pyx_Generator_USED) || defined(__Pyx_Coroutine_USED) - if (__Pyx_patch_abc() < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (__Pyx_patch_abc() < 0) __PYX_ERR(0, 1, __pyx_L1_error) #endif /* "GPy/util/linalg_cython.pyx":9 @@ -4254,9 +5298,9 @@ PyMODINIT_FUNC PyInit_linalg_cython(void) * cdef int N = A.shape[0] * if not upper: */ - __pyx_t_1 = PyCFunction_NewEx(&__pyx_mdef_3GPy_4util_13linalg_cython_1symmetrify, NULL, __pyx_n_s_GPy_util_linalg_cython); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 9; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyCFunction_NewEx(&__pyx_mdef_3GPy_4util_13linalg_cython_1symmetrify, NULL, __pyx_n_s_GPy_util_linalg_cython); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 9, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_1); - if (PyDict_SetItem(__pyx_d, __pyx_n_s_symmetrify, __pyx_t_1) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 9; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyDict_SetItem(__pyx_d, __pyx_n_s_symmetrify, __pyx_t_1) < 0) __PYX_ERR(0, 9, __pyx_L1_error) __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; /* "GPy/util/linalg_cython.pyx":24 @@ -4266,9 +5310,9 @@ PyMODINIT_FUNC PyInit_linalg_cython(void) * cdef double r, c, s * cdef int j, i */ - __pyx_t_1 = PyCFunction_NewEx(&__pyx_mdef_3GPy_4util_13linalg_cython_3cholupdate, NULL, __pyx_n_s_GPy_util_linalg_cython); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 24; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = PyCFunction_NewEx(&__pyx_mdef_3GPy_4util_13linalg_cython_3cholupdate, NULL, __pyx_n_s_GPy_util_linalg_cython); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 24, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_1); - if (PyDict_SetItem(__pyx_d, __pyx_n_s_cholupdate, __pyx_t_1) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 24; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyDict_SetItem(__pyx_d, __pyx_n_s_cholupdate, __pyx_t_1) < 0) __PYX_ERR(0, 24, __pyx_L1_error) __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; /* "GPy/util/linalg_cython.pyx":1 @@ -4276,17 +5320,17 @@ PyMODINIT_FUNC PyInit_linalg_cython(void) * cimport numpy as np * from cpython cimport bool */ - __pyx_t_1 = PyDict_New(); if (unlikely(!__pyx_t_1)) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + __pyx_t_1 = __Pyx_PyDict_NewPresized(0); if (unlikely(!__pyx_t_1)) __PYX_ERR(0, 1, __pyx_L1_error) __Pyx_GOTREF(__pyx_t_1); - if (PyDict_SetItem(__pyx_d, __pyx_n_s_test, __pyx_t_1) < 0) {__pyx_filename = __pyx_f[0]; __pyx_lineno = 1; __pyx_clineno = __LINE__; goto __pyx_L1_error;} + if (PyDict_SetItem(__pyx_d, __pyx_n_s_test, __pyx_t_1) < 0) __PYX_ERR(0, 1, __pyx_L1_error) __Pyx_DECREF(__pyx_t_1); __pyx_t_1 = 0; - /* "../../../../.virtualenvs/py27/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":976 - * arr.base = baseptr + /* "../../../.conda/envs/bays-dev-py2/lib/python2.7/site-packages/Cython/Includes/numpy/__init__.pxd":1046 + * raise ImportError("numpy.core.umath failed to import") * - * cdef inline object get_array_base(ndarray arr): # <<<<<<<<<<<<<< - * if arr.base is NULL: - * return None + * cdef inline int import_ufunc() except -1: # <<<<<<<<<<<<<< + * try: + * _import_umath() */ /*--- Wrapped vars code ---*/ @@ -4298,27 +5342,30 @@ PyMODINIT_FUNC PyInit_linalg_cython(void) if (__pyx_d) { __Pyx_AddTraceback("init GPy.util.linalg_cython", __pyx_clineno, __pyx_lineno, __pyx_filename); } - Py_DECREF(__pyx_m); __pyx_m = 0; + Py_CLEAR(__pyx_m); } else if (!PyErr_Occurred()) { PyErr_SetString(PyExc_ImportError, "init GPy.util.linalg_cython"); } __pyx_L0:; __Pyx_RefNannyFinishContext(); - #if PY_MAJOR_VERSION < 3 - return; - #else + #if CYTHON_PEP489_MULTI_PHASE_INIT + return (__pyx_m != NULL) ? 0 : -1; + #elif PY_MAJOR_VERSION >= 3 return __pyx_m; + #else + return; #endif } /* --- Runtime support code --- */ +/* Refnanny */ #if CYTHON_REFNANNY static __Pyx_RefNannyAPIStruct *__Pyx_RefNannyImportAPI(const char *modname) { PyObject *m = NULL, *p = NULL; void *r = NULL; - m = PyImport_ImportModule((char *)modname); + m = PyImport_ImportModule(modname); if (!m) goto end; - p = PyObject_GetAttrString(m, (char *)"RefNannyAPI"); + p = PyObject_GetAttrString(m, "RefNannyAPI"); if (!p) goto end; r = PyLong_AsVoidPtr(p); end: @@ -4328,6 +5375,21 @@ end: } #endif +/* PyObjectGetAttrStr */ +#if CYTHON_USE_TYPE_SLOTS +static CYTHON_INLINE PyObject* __Pyx_PyObject_GetAttrStr(PyObject* obj, PyObject* attr_name) { + PyTypeObject* tp = Py_TYPE(obj); + if (likely(tp->tp_getattro)) + return tp->tp_getattro(obj, attr_name); +#if PY_MAJOR_VERSION < 3 + if (likely(tp->tp_getattr)) + return tp->tp_getattr(obj, PyString_AS_STRING(attr_name)); +#endif + return PyObject_GetAttr(obj, attr_name); +} +#endif + +/* GetBuiltinName */ static PyObject *__Pyx_GetBuiltinName(PyObject *name) { PyObject* result = __Pyx_PyObject_GetAttrStr(__pyx_b, name); if (unlikely(!result)) { @@ -4341,6 +5403,7 @@ static PyObject *__Pyx_GetBuiltinName(PyObject *name) { return result; } +/* RaiseArgTupleInvalid */ static void __Pyx_RaiseArgtupleInvalid( const char* func_name, int exact, @@ -4366,6 +5429,7 @@ static void __Pyx_RaiseArgtupleInvalid( (num_expected == 1) ? "" : "s", num_found); } +/* RaiseDoubleKeywords */ static void __Pyx_RaiseDoubleKeywordsError( const char* func_name, PyObject* kw_name) @@ -4379,6 +5443,7 @@ static void __Pyx_RaiseDoubleKeywordsError( #endif } +/* ParseKeywords */ static int __Pyx_ParseOptionalKeywords( PyObject *kwds, PyObject **argnames[], @@ -4480,36 +5545,39 @@ bad: return -1; } -static void __Pyx_RaiseArgumentTypeInvalid(const char* name, PyObject *obj, PyTypeObject *type) { - PyErr_Format(PyExc_TypeError, - "Argument '%.200s' has incorrect type (expected %.200s, got %.200s)", - name, type->tp_name, Py_TYPE(obj)->tp_name); -} -static CYTHON_INLINE int __Pyx_ArgTypeTest(PyObject *obj, PyTypeObject *type, int none_allowed, - const char *name, int exact) +/* ArgTypeTest */ +static int __Pyx__ArgTypeTest(PyObject *obj, PyTypeObject *type, const char *name, int exact) { if (unlikely(!type)) { PyErr_SetString(PyExc_SystemError, "Missing type object"); return 0; } - if (none_allowed && obj == Py_None) return 1; else if (exact) { - if (likely(Py_TYPE(obj) == type)) return 1; #if PY_MAJOR_VERSION == 2 - else if ((type == &PyBaseString_Type) && likely(__Pyx_PyBaseString_CheckExact(obj))) return 1; + if ((type == &PyBaseString_Type) && likely(__Pyx_PyBaseString_CheckExact(obj))) return 1; #endif } else { - if (likely(PyObject_TypeCheck(obj, type))) return 1; + if (likely(__Pyx_TypeCheck(obj, type))) return 1; } - __Pyx_RaiseArgumentTypeInvalid(name, obj, type); + PyErr_Format(PyExc_TypeError, + "Argument '%.200s' has incorrect type (expected %.200s, got %.200s)", + name, type->tp_name, Py_TYPE(obj)->tp_name); return 0; } -static CYTHON_INLINE int __Pyx_IsLittleEndian(void) { - unsigned int n = 1; - return *(unsigned char*)(&n) != 0; +/* IsLittleEndian */ +static CYTHON_INLINE int __Pyx_Is_Little_Endian(void) +{ + union { + uint32_t u32; + uint8_t u8[4]; + } S; + S.u32 = 0x01020304; + return S.u8[0] == 4; } + +/* BufferFormatCheck */ static void __Pyx_BufFmt_Init(__Pyx_BufFmt_Context* ctx, __Pyx_BufFmt_StackElem* stack, __Pyx_TypeInfo* type) { @@ -4831,7 +5899,7 @@ static int __Pyx_BufFmt_ProcessTypeChunk(__Pyx_BufFmt_Context* ctx) { ctx->is_complex = 0; return 0; } -static CYTHON_INLINE PyObject * +static PyObject * __pyx_buffmt_parse_array(__Pyx_BufFmt_Context* ctx, const char** tsp) { const char *ts = *tsp; @@ -4896,7 +5964,7 @@ static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const cha ++ts; break; case '<': - if (!__Pyx_IsLittleEndian()) { + if (!__Pyx_Is_Little_Endian()) { PyErr_SetString(PyExc_ValueError, "Little-endian buffer not supported on big-endian compiler"); return NULL; } @@ -4905,7 +5973,7 @@ static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const cha break; case '>': case '!': - if (__Pyx_IsLittleEndian()) { + if (__Pyx_Is_Little_Endian()) { PyErr_SetString(PyExc_ValueError, "Big-endian buffer not supported on little-endian compiler"); return NULL; } @@ -4969,6 +6037,7 @@ static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const cha __Pyx_BufFmt_RaiseUnexpectedChar('Z'); return NULL; } + CYTHON_FALLTHROUGH; case 'c': case 'b': case 'B': case 'h': case 'H': case 'i': case 'I': case 'l': case 'L': case 'q': case 'Q': case 'f': case 'd': case 'g': @@ -4981,6 +6050,7 @@ static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const cha ++ts; break; } + CYTHON_FALLTHROUGH; case 's': if (__Pyx_BufFmt_ProcessTypeChunk(ctx) == -1) return NULL; ctx->enc_count = ctx->new_count; @@ -5008,24 +6078,30 @@ static const char* __Pyx_BufFmt_CheckString(__Pyx_BufFmt_Context* ctx, const cha } } } -static CYTHON_INLINE void __Pyx_ZeroBuffer(Py_buffer* buf) { + +/* BufferGetAndValidate */ + static CYTHON_INLINE void __Pyx_SafeReleaseBuffer(Py_buffer* info) { + if (unlikely(info->buf == NULL)) return; + if (info->suboffsets == __Pyx_minusones) info->suboffsets = NULL; + __Pyx_ReleaseBuffer(info); +} +static void __Pyx_ZeroBuffer(Py_buffer* buf) { buf->buf = NULL; buf->obj = NULL; buf->strides = __Pyx_zeros; buf->shape = __Pyx_zeros; buf->suboffsets = __Pyx_minusones; } -static CYTHON_INLINE int __Pyx_GetBufferAndValidate( +static int __Pyx__GetBufferAndValidate( Py_buffer* buf, PyObject* obj, __Pyx_TypeInfo* dtype, int flags, int nd, int cast, __Pyx_BufFmt_StackElem* stack) { - if (obj == Py_None || obj == NULL) { - __Pyx_ZeroBuffer(buf); - return 0; - } buf->buf = NULL; - if (__Pyx_GetBuffer(obj, buf, flags) == -1) goto fail; - if (buf->ndim != nd) { + if (unlikely(__Pyx_GetBuffer(obj, buf, flags) == -1)) { + __Pyx_ZeroBuffer(buf); + return -1; + } + if (unlikely(buf->ndim != nd)) { PyErr_Format(PyExc_ValueError, "Buffer has wrong number of dimensions (expected %d, got %d)", nd, buf->ndim); @@ -5036,7 +6112,7 @@ static CYTHON_INLINE int __Pyx_GetBufferAndValidate( __Pyx_BufFmt_Init(&ctx, stack, dtype); if (!__Pyx_BufFmt_CheckString(&ctx, buf->format)) goto fail; } - if ((unsigned)buf->itemsize != dtype->size) { + if (unlikely((unsigned)buf->itemsize != dtype->size)) { PyErr_Format(PyExc_ValueError, "Item size of buffer (%" CYTHON_FORMAT_SSIZE_T "d byte%s) does not match size of '%s' (%" CYTHON_FORMAT_SSIZE_T "d byte%s)", buf->itemsize, (buf->itemsize > 1) ? "s" : "", @@ -5046,19 +6122,14 @@ static CYTHON_INLINE int __Pyx_GetBufferAndValidate( if (buf->suboffsets == NULL) buf->suboffsets = __Pyx_minusones; return 0; fail:; - __Pyx_ZeroBuffer(buf); + __Pyx_SafeReleaseBuffer(buf); return -1; } -static CYTHON_INLINE void __Pyx_SafeReleaseBuffer(Py_buffer* info) { - if (info->buf == NULL) return; - if (info->suboffsets == __Pyx_minusones) info->suboffsets = NULL; - __Pyx_ReleaseBuffer(info); -} -static CYTHON_INLINE void __Pyx_ErrRestore(PyObject *type, PyObject *value, PyObject *tb) { -#if CYTHON_COMPILING_IN_CPYTHON +/* PyErrFetchRestore */ + #if CYTHON_FAST_THREAD_STATE +static CYTHON_INLINE void __Pyx_ErrRestoreInState(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb) { PyObject *tmp_type, *tmp_value, *tmp_tb; - PyThreadState *tstate = PyThreadState_GET(); tmp_type = tstate->curexc_type; tmp_value = tstate->curexc_value; tmp_tb = tstate->curexc_traceback; @@ -5068,25 +6139,19 @@ static CYTHON_INLINE void __Pyx_ErrRestore(PyObject *type, PyObject *value, PyOb Py_XDECREF(tmp_type); Py_XDECREF(tmp_value); Py_XDECREF(tmp_tb); -#else - PyErr_Restore(type, value, tb); -#endif } -static CYTHON_INLINE void __Pyx_ErrFetch(PyObject **type, PyObject **value, PyObject **tb) { -#if CYTHON_COMPILING_IN_CPYTHON - PyThreadState *tstate = PyThreadState_GET(); +static CYTHON_INLINE void __Pyx_ErrFetchInState(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb) { *type = tstate->curexc_type; *value = tstate->curexc_value; *tb = tstate->curexc_traceback; tstate->curexc_type = 0; tstate->curexc_value = 0; tstate->curexc_traceback = 0; -#else - PyErr_Fetch(type, value, tb); -#endif } +#endif -#if CYTHON_COMPILING_IN_CPYTHON +/* PyObjectCall */ + #if CYTHON_COMPILING_IN_CPYTHON static CYTHON_INLINE PyObject* __Pyx_PyObject_Call(PyObject *func, PyObject *arg, PyObject *kw) { PyObject *result; ternaryfunc call = func->ob_type->tp_call; @@ -5105,9 +6170,11 @@ static CYTHON_INLINE PyObject* __Pyx_PyObject_Call(PyObject *func, PyObject *arg } #endif -#if PY_MAJOR_VERSION < 3 +/* RaiseException */ + #if PY_MAJOR_VERSION < 3 static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, CYTHON_UNUSED PyObject *cause) { + __Pyx_PyThreadState_declare Py_XINCREF(type); if (!value || value == Py_None) value = NULL; @@ -5146,6 +6213,7 @@ static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, goto raise_error; } } + __Pyx_PyThreadState_assign __Pyx_ErrRestore(type, value, tb); return; raise_error: @@ -5218,11 +6286,7 @@ static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject "raise: exception class must be a subclass of BaseException"); goto bad; } -#if PY_VERSION_HEX >= 0x03030000 if (cause) { -#else - if (cause && cause != Py_None) { -#endif PyObject *fixed_cause; if (cause == Py_None) { fixed_cause = NULL; @@ -5250,7 +6314,7 @@ static void __Pyx_Raise(PyObject *type, PyObject *value, PyObject *tb, PyObject PyErr_Restore(tmp_type, tmp_value, tb); Py_XDECREF(tmp_tb); #else - PyThreadState *tstate = PyThreadState_GET(); + PyThreadState *tstate = __Pyx_PyThreadState_Current; PyObject* tmp_tb = tstate->curexc_traceback; if (tb != tmp_tb) { Py_INCREF(tb); @@ -5265,34 +6329,523 @@ bad: } #endif -static CYTHON_INLINE void __Pyx_RaiseTooManyValuesError(Py_ssize_t expected) { +/* PyCFunctionFastCall */ + #if CYTHON_FAST_PYCCALL +static CYTHON_INLINE PyObject * __Pyx_PyCFunction_FastCall(PyObject *func_obj, PyObject **args, Py_ssize_t nargs) { + PyCFunctionObject *func = (PyCFunctionObject*)func_obj; + PyCFunction meth = PyCFunction_GET_FUNCTION(func); + PyObject *self = PyCFunction_GET_SELF(func); + int flags = PyCFunction_GET_FLAGS(func); + assert(PyCFunction_Check(func)); + assert(METH_FASTCALL == (flags & ~(METH_CLASS | METH_STATIC | METH_COEXIST | METH_KEYWORDS | METH_STACKLESS))); + assert(nargs >= 0); + assert(nargs == 0 || args != NULL); + /* _PyCFunction_FastCallDict() must not be called with an exception set, + because it may clear it (directly or indirectly) and so the + caller loses its exception */ + assert(!PyErr_Occurred()); + if ((PY_VERSION_HEX < 0x030700A0) || unlikely(flags & METH_KEYWORDS)) { + return (*((__Pyx_PyCFunctionFastWithKeywords)(void*)meth)) (self, args, nargs, NULL); + } else { + return (*((__Pyx_PyCFunctionFast)(void*)meth)) (self, args, nargs); + } +} +#endif + +/* PyFunctionFastCall */ + #if CYTHON_FAST_PYCALL +static PyObject* __Pyx_PyFunction_FastCallNoKw(PyCodeObject *co, PyObject **args, Py_ssize_t na, + PyObject *globals) { + PyFrameObject *f; + PyThreadState *tstate = __Pyx_PyThreadState_Current; + PyObject **fastlocals; + Py_ssize_t i; + PyObject *result; + assert(globals != NULL); + /* XXX Perhaps we should create a specialized + PyFrame_New() that doesn't take locals, but does + take builtins without sanity checking them. + */ + assert(tstate != NULL); + f = PyFrame_New(tstate, co, globals, NULL); + if (f == NULL) { + return NULL; + } + fastlocals = __Pyx_PyFrame_GetLocalsplus(f); + for (i = 0; i < na; i++) { + Py_INCREF(*args); + fastlocals[i] = *args++; + } + result = PyEval_EvalFrameEx(f,0); + ++tstate->recursion_depth; + Py_DECREF(f); + --tstate->recursion_depth; + return result; +} +#if 1 || PY_VERSION_HEX < 0x030600B1 +static PyObject *__Pyx_PyFunction_FastCallDict(PyObject *func, PyObject **args, int nargs, PyObject *kwargs) { + PyCodeObject *co = (PyCodeObject *)PyFunction_GET_CODE(func); + PyObject *globals = PyFunction_GET_GLOBALS(func); + PyObject *argdefs = PyFunction_GET_DEFAULTS(func); + PyObject *closure; +#if PY_MAJOR_VERSION >= 3 + PyObject *kwdefs; +#endif + PyObject *kwtuple, **k; + PyObject **d; + Py_ssize_t nd; + Py_ssize_t nk; + PyObject *result; + assert(kwargs == NULL || PyDict_Check(kwargs)); + nk = kwargs ? PyDict_Size(kwargs) : 0; + if (Py_EnterRecursiveCall((char*)" while calling a Python object")) { + return NULL; + } + if ( +#if PY_MAJOR_VERSION >= 3 + co->co_kwonlyargcount == 0 && +#endif + likely(kwargs == NULL || nk == 0) && + co->co_flags == (CO_OPTIMIZED | CO_NEWLOCALS | CO_NOFREE)) { + if (argdefs == NULL && co->co_argcount == nargs) { + result = __Pyx_PyFunction_FastCallNoKw(co, args, nargs, globals); + goto done; + } + else if (nargs == 0 && argdefs != NULL + && co->co_argcount == Py_SIZE(argdefs)) { + /* function called with no arguments, but all parameters have + a default value: use default values as arguments .*/ + args = &PyTuple_GET_ITEM(argdefs, 0); + result =__Pyx_PyFunction_FastCallNoKw(co, args, Py_SIZE(argdefs), globals); + goto done; + } + } + if (kwargs != NULL) { + Py_ssize_t pos, i; + kwtuple = PyTuple_New(2 * nk); + if (kwtuple == NULL) { + result = NULL; + goto done; + } + k = &PyTuple_GET_ITEM(kwtuple, 0); + pos = i = 0; + while (PyDict_Next(kwargs, &pos, &k[i], &k[i+1])) { + Py_INCREF(k[i]); + Py_INCREF(k[i+1]); + i += 2; + } + nk = i / 2; + } + else { + kwtuple = NULL; + k = NULL; + } + closure = PyFunction_GET_CLOSURE(func); +#if PY_MAJOR_VERSION >= 3 + kwdefs = PyFunction_GET_KW_DEFAULTS(func); +#endif + if (argdefs != NULL) { + d = &PyTuple_GET_ITEM(argdefs, 0); + nd = Py_SIZE(argdefs); + } + else { + d = NULL; + nd = 0; + } +#if PY_MAJOR_VERSION >= 3 + result = PyEval_EvalCodeEx((PyObject*)co, globals, (PyObject *)NULL, + args, nargs, + k, (int)nk, + d, (int)nd, kwdefs, closure); +#else + result = PyEval_EvalCodeEx(co, globals, (PyObject *)NULL, + args, nargs, + k, (int)nk, + d, (int)nd, closure); +#endif + Py_XDECREF(kwtuple); +done: + Py_LeaveRecursiveCall(); + return result; +} +#endif +#endif + +/* PyObjectCallMethO */ + #if CYTHON_COMPILING_IN_CPYTHON +static CYTHON_INLINE PyObject* __Pyx_PyObject_CallMethO(PyObject *func, PyObject *arg) { + PyObject *self, *result; + PyCFunction cfunc; + cfunc = PyCFunction_GET_FUNCTION(func); + self = PyCFunction_GET_SELF(func); + if (unlikely(Py_EnterRecursiveCall((char*)" while calling a Python object"))) + return NULL; + result = cfunc(self, arg); + Py_LeaveRecursiveCall(); + if (unlikely(!result) && unlikely(!PyErr_Occurred())) { + PyErr_SetString( + PyExc_SystemError, + "NULL result without error in PyObject_Call"); + } + return result; +} +#endif + +/* PyObjectCallOneArg */ + #if CYTHON_COMPILING_IN_CPYTHON +static PyObject* __Pyx__PyObject_CallOneArg(PyObject *func, PyObject *arg) { + PyObject *result; + PyObject *args = PyTuple_New(1); + if (unlikely(!args)) return NULL; + Py_INCREF(arg); + PyTuple_SET_ITEM(args, 0, arg); + result = __Pyx_PyObject_Call(func, args, NULL); + Py_DECREF(args); + return result; +} +static CYTHON_INLINE PyObject* __Pyx_PyObject_CallOneArg(PyObject *func, PyObject *arg) { +#if CYTHON_FAST_PYCALL + if (PyFunction_Check(func)) { + return __Pyx_PyFunction_FastCall(func, &arg, 1); + } +#endif + if (likely(PyCFunction_Check(func))) { + if (likely(PyCFunction_GET_FLAGS(func) & METH_O)) { + return __Pyx_PyObject_CallMethO(func, arg); +#if CYTHON_FAST_PYCCALL + } else if (PyCFunction_GET_FLAGS(func) & METH_FASTCALL) { + return __Pyx_PyCFunction_FastCall(func, &arg, 1); +#endif + } + } + return __Pyx__PyObject_CallOneArg(func, arg); +} +#else +static CYTHON_INLINE PyObject* __Pyx_PyObject_CallOneArg(PyObject *func, PyObject *arg) { + PyObject *result; + PyObject *args = PyTuple_Pack(1, arg); + if (unlikely(!args)) return NULL; + result = __Pyx_PyObject_Call(func, args, NULL); + Py_DECREF(args); + return result; +} +#endif + +/* DictGetItem */ + #if PY_MAJOR_VERSION >= 3 && !CYTHON_COMPILING_IN_PYPY +static PyObject *__Pyx_PyDict_GetItem(PyObject *d, PyObject* key) { + PyObject *value; + value = PyDict_GetItemWithError(d, key); + if (unlikely(!value)) { + if (!PyErr_Occurred()) { + if (unlikely(PyTuple_Check(key))) { + PyObject* args = PyTuple_Pack(1, key); + if (likely(args)) { + PyErr_SetObject(PyExc_KeyError, args); + Py_DECREF(args); + } + } else { + PyErr_SetObject(PyExc_KeyError, key); + } + } + return NULL; + } + Py_INCREF(value); + return value; +} +#endif + +/* RaiseTooManyValuesToUnpack */ + static CYTHON_INLINE void __Pyx_RaiseTooManyValuesError(Py_ssize_t expected) { PyErr_Format(PyExc_ValueError, "too many values to unpack (expected %" CYTHON_FORMAT_SSIZE_T "d)", expected); } -static CYTHON_INLINE void __Pyx_RaiseNeedMoreValuesError(Py_ssize_t index) { +/* RaiseNeedMoreValuesToUnpack */ + static CYTHON_INLINE void __Pyx_RaiseNeedMoreValuesError(Py_ssize_t index) { PyErr_Format(PyExc_ValueError, "need more than %" CYTHON_FORMAT_SSIZE_T "d value%.1s to unpack", index, (index == 1) ? "" : "s"); } -static CYTHON_INLINE void __Pyx_RaiseNoneNotIterableError(void) { +/* RaiseNoneIterError */ + static CYTHON_INLINE void __Pyx_RaiseNoneNotIterableError(void) { PyErr_SetString(PyExc_TypeError, "'NoneType' object is not iterable"); } -static CYTHON_INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type) { +/* ExtTypeTest */ + static CYTHON_INLINE int __Pyx_TypeTest(PyObject *obj, PyTypeObject *type) { if (unlikely(!type)) { PyErr_SetString(PyExc_SystemError, "Missing type object"); return 0; } - if (likely(PyObject_TypeCheck(obj, type))) + if (likely(__Pyx_TypeCheck(obj, type))) return 1; PyErr_Format(PyExc_TypeError, "Cannot convert %.200s to %.200s", Py_TYPE(obj)->tp_name, type->tp_name); return 0; } -static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) { +/* GetTopmostException */ + #if CYTHON_USE_EXC_INFO_STACK +static _PyErr_StackItem * +__Pyx_PyErr_GetTopmostException(PyThreadState *tstate) +{ + _PyErr_StackItem *exc_info = tstate->exc_info; + while ((exc_info->exc_type == NULL || exc_info->exc_type == Py_None) && + exc_info->previous_item != NULL) + { + exc_info = exc_info->previous_item; + } + return exc_info; +} +#endif + +/* SaveResetException */ + #if CYTHON_FAST_THREAD_STATE +static CYTHON_INLINE void __Pyx__ExceptionSave(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb) { + #if CYTHON_USE_EXC_INFO_STACK + _PyErr_StackItem *exc_info = __Pyx_PyErr_GetTopmostException(tstate); + *type = exc_info->exc_type; + *value = exc_info->exc_value; + *tb = exc_info->exc_traceback; + #else + *type = tstate->exc_type; + *value = tstate->exc_value; + *tb = tstate->exc_traceback; + #endif + Py_XINCREF(*type); + Py_XINCREF(*value); + Py_XINCREF(*tb); +} +static CYTHON_INLINE void __Pyx__ExceptionReset(PyThreadState *tstate, PyObject *type, PyObject *value, PyObject *tb) { + PyObject *tmp_type, *tmp_value, *tmp_tb; + #if CYTHON_USE_EXC_INFO_STACK + _PyErr_StackItem *exc_info = tstate->exc_info; + tmp_type = exc_info->exc_type; + tmp_value = exc_info->exc_value; + tmp_tb = exc_info->exc_traceback; + exc_info->exc_type = type; + exc_info->exc_value = value; + exc_info->exc_traceback = tb; + #else + tmp_type = tstate->exc_type; + tmp_value = tstate->exc_value; + tmp_tb = tstate->exc_traceback; + tstate->exc_type = type; + tstate->exc_value = value; + tstate->exc_traceback = tb; + #endif + Py_XDECREF(tmp_type); + Py_XDECREF(tmp_value); + Py_XDECREF(tmp_tb); +} +#endif + +/* PyErrExceptionMatches */ + #if CYTHON_FAST_THREAD_STATE +static int __Pyx_PyErr_ExceptionMatchesTuple(PyObject *exc_type, PyObject *tuple) { + Py_ssize_t i, n; + n = PyTuple_GET_SIZE(tuple); +#if PY_MAJOR_VERSION >= 3 + for (i=0; icurexc_type; + if (exc_type == err) return 1; + if (unlikely(!exc_type)) return 0; + if (unlikely(PyTuple_Check(err))) + return __Pyx_PyErr_ExceptionMatchesTuple(exc_type, err); + return __Pyx_PyErr_GivenExceptionMatches(exc_type, err); +} +#endif + +/* GetException */ + #if CYTHON_FAST_THREAD_STATE +static int __Pyx__GetException(PyThreadState *tstate, PyObject **type, PyObject **value, PyObject **tb) +#else +static int __Pyx_GetException(PyObject **type, PyObject **value, PyObject **tb) +#endif +{ + PyObject *local_type, *local_value, *local_tb; +#if CYTHON_FAST_THREAD_STATE + PyObject *tmp_type, *tmp_value, *tmp_tb; + local_type = tstate->curexc_type; + local_value = tstate->curexc_value; + local_tb = tstate->curexc_traceback; + tstate->curexc_type = 0; + tstate->curexc_value = 0; + tstate->curexc_traceback = 0; +#else + PyErr_Fetch(&local_type, &local_value, &local_tb); +#endif + PyErr_NormalizeException(&local_type, &local_value, &local_tb); +#if CYTHON_FAST_THREAD_STATE + if (unlikely(tstate->curexc_type)) +#else + if (unlikely(PyErr_Occurred())) +#endif + goto bad; + #if PY_MAJOR_VERSION >= 3 + if (local_tb) { + if (unlikely(PyException_SetTraceback(local_value, local_tb) < 0)) + goto bad; + } + #endif + Py_XINCREF(local_tb); + Py_XINCREF(local_type); + Py_XINCREF(local_value); + *type = local_type; + *value = local_value; + *tb = local_tb; +#if CYTHON_FAST_THREAD_STATE + #if CYTHON_USE_EXC_INFO_STACK + { + _PyErr_StackItem *exc_info = tstate->exc_info; + tmp_type = exc_info->exc_type; + tmp_value = exc_info->exc_value; + tmp_tb = exc_info->exc_traceback; + exc_info->exc_type = local_type; + exc_info->exc_value = local_value; + exc_info->exc_traceback = local_tb; + } + #else + tmp_type = tstate->exc_type; + tmp_value = tstate->exc_value; + tmp_tb = tstate->exc_traceback; + tstate->exc_type = local_type; + tstate->exc_value = local_value; + tstate->exc_traceback = local_tb; + #endif + Py_XDECREF(tmp_type); + Py_XDECREF(tmp_value); + Py_XDECREF(tmp_tb); +#else + PyErr_SetExcInfo(local_type, local_value, local_tb); +#endif + return 0; +bad: + *type = 0; + *value = 0; + *tb = 0; + Py_XDECREF(local_type); + Py_XDECREF(local_value); + Py_XDECREF(local_tb); + return -1; +} + +/* TypeImport */ + #ifndef __PYX_HAVE_RT_ImportType +#define __PYX_HAVE_RT_ImportType +static PyTypeObject *__Pyx_ImportType(PyObject *module, const char *module_name, const char *class_name, + size_t size, enum __Pyx_ImportType_CheckSize check_size) +{ + PyObject *result = 0; + char warning[200]; + Py_ssize_t basicsize; +#ifdef Py_LIMITED_API + PyObject *py_basicsize; +#endif + result = PyObject_GetAttrString(module, class_name); + if (!result) + goto bad; + if (!PyType_Check(result)) { + PyErr_Format(PyExc_TypeError, + "%.200s.%.200s is not a type object", + module_name, class_name); + goto bad; + } +#ifndef Py_LIMITED_API + basicsize = ((PyTypeObject *)result)->tp_basicsize; +#else + py_basicsize = PyObject_GetAttrString(result, "__basicsize__"); + if (!py_basicsize) + goto bad; + basicsize = PyLong_AsSsize_t(py_basicsize); + Py_DECREF(py_basicsize); + py_basicsize = 0; + if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred()) + goto bad; +#endif + if ((size_t)basicsize < size) { + PyErr_Format(PyExc_ValueError, + "%.200s.%.200s size changed, may indicate binary incompatibility. " + "Expected %zd from C header, got %zd from PyObject", + module_name, class_name, size, basicsize); + goto bad; + } + if (check_size == __Pyx_ImportType_CheckSize_Error && (size_t)basicsize != size) { + PyErr_Format(PyExc_ValueError, + "%.200s.%.200s size changed, may indicate binary incompatibility. " + "Expected %zd from C header, got %zd from PyObject", + module_name, class_name, size, basicsize); + goto bad; + } + else if (check_size == __Pyx_ImportType_CheckSize_Warn && (size_t)basicsize > size) { + PyOS_snprintf(warning, sizeof(warning), + "%s.%s size changed, may indicate binary incompatibility. " + "Expected %zd from C header, got %zd from PyObject", + module_name, class_name, size, basicsize); + if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad; + } + return (PyTypeObject *)result; +bad: + Py_XDECREF(result); + return NULL; +} +#endif + +/* CLineInTraceback */ + #ifndef CYTHON_CLINE_IN_TRACEBACK +static int __Pyx_CLineForTraceback(PyThreadState *tstate, int c_line) { + PyObject *use_cline; + PyObject *ptype, *pvalue, *ptraceback; +#if CYTHON_COMPILING_IN_CPYTHON + PyObject **cython_runtime_dict; +#endif + if (unlikely(!__pyx_cython_runtime)) { + return c_line; + } + __Pyx_ErrFetchInState(tstate, &ptype, &pvalue, &ptraceback); +#if CYTHON_COMPILING_IN_CPYTHON + cython_runtime_dict = _PyObject_GetDictPtr(__pyx_cython_runtime); + if (likely(cython_runtime_dict)) { + __PYX_PY_DICT_LOOKUP_IF_MODIFIED( + use_cline, *cython_runtime_dict, + __Pyx_PyDict_GetItemStr(*cython_runtime_dict, __pyx_n_s_cline_in_traceback)) + } else +#endif + { + PyObject *use_cline_obj = __Pyx_PyObject_GetAttrStr(__pyx_cython_runtime, __pyx_n_s_cline_in_traceback); + if (use_cline_obj) { + use_cline = PyObject_Not(use_cline_obj) ? Py_False : Py_True; + Py_DECREF(use_cline_obj); + } else { + PyErr_Clear(); + use_cline = NULL; + } + } + if (!use_cline) { + c_line = 0; + PyObject_SetAttr(__pyx_cython_runtime, __pyx_n_s_cline_in_traceback, Py_False); + } + else if (use_cline == Py_False || (use_cline != Py_True && PyObject_Not(use_cline) != 0)) { + c_line = 0; + } + __Pyx_ErrRestoreInState(tstate, ptype, pvalue, ptraceback); + return c_line; +} +#endif + +/* CodeObjectCache */ + static int __pyx_bisect_code_objects(__Pyx_CodeObjectCacheEntry* entries, int count, int code_line) { int start = 0, mid = 0, end = count - 1; if (end >= 0 && code_line > entries[end].code_line) { return count; @@ -5371,7 +6924,8 @@ static void __pyx_insert_code_object(int code_line, PyCodeObject* code_object) { Py_INCREF(code_object); } -#include "compile.h" +/* AddTraceback */ + #include "compile.h" #include "frameobject.h" #include "traceback.h" static PyCodeObject* __Pyx_CreateCodeObjectForTraceback( @@ -5430,21 +6984,25 @@ static void __Pyx_AddTraceback(const char *funcname, int c_line, int py_line, const char *filename) { PyCodeObject *py_code = 0; PyFrameObject *py_frame = 0; - py_code = __pyx_find_code_object(c_line ? c_line : py_line); + PyThreadState *tstate = __Pyx_PyThreadState_Current; + if (c_line) { + c_line = __Pyx_CLineForTraceback(tstate, c_line); + } + py_code = __pyx_find_code_object(c_line ? -c_line : py_line); if (!py_code) { py_code = __Pyx_CreateCodeObjectForTraceback( funcname, c_line, py_line, filename); if (!py_code) goto bad; - __pyx_insert_code_object(c_line ? c_line : py_line, py_code); + __pyx_insert_code_object(c_line ? -c_line : py_line, py_code); } py_frame = PyFrame_New( - PyThreadState_GET(), /*PyThreadState *tstate,*/ - py_code, /*PyCodeObject *code,*/ - __pyx_d, /*PyObject *globals,*/ - 0 /*PyObject *locals*/ + tstate, /*PyThreadState *tstate,*/ + py_code, /*PyCodeObject *code,*/ + __pyx_d, /*PyObject *globals,*/ + 0 /*PyObject *locals*/ ); if (!py_frame) goto bad; - py_frame->f_lineno = py_line; + __Pyx_PyFrame_SetLineNumber(py_frame, py_line); PyTraceBack_Here(py_frame); bad: Py_XDECREF(py_code); @@ -5454,7 +7012,7 @@ bad: #if PY_MAJOR_VERSION < 3 static int __Pyx_GetBuffer(PyObject *obj, Py_buffer *view, int flags) { if (PyObject_CheckBuffer(obj)) return PyObject_GetBuffer(obj, view, flags); - if (PyObject_TypeCheck(obj, __pyx_ptype_5numpy_ndarray)) return __pyx_pw_5numpy_7ndarray_1__getbuffer__(obj, view, flags); + if (__Pyx_TypeCheck(obj, __pyx_ptype_5numpy_ndarray)) return __pyx_pw_5numpy_7ndarray_1__getbuffer__(obj, view, flags); PyErr_Format(PyExc_TypeError, "'%.200s' does not have the buffer interface", Py_TYPE(obj)->tp_name); return -1; } @@ -5465,14 +7023,16 @@ static void __Pyx_ReleaseBuffer(Py_buffer *view) { PyBuffer_Release(view); return; } - if (PyObject_TypeCheck(obj, __pyx_ptype_5numpy_ndarray)) { __pyx_pw_5numpy_7ndarray_3__releasebuffer__(obj, view); return; } - Py_DECREF(obj); + if ((0)) {} + else if (__Pyx_TypeCheck(obj, __pyx_ptype_5numpy_ndarray)) __pyx_pw_5numpy_7ndarray_3__releasebuffer__(obj, view); view->obj = NULL; + Py_DECREF(obj); } #endif - #define __PYX_VERIFY_RETURN_INT(target_type, func_type, func_value)\ + /* CIntFromPyVerify */ + #define __PYX_VERIFY_RETURN_INT(target_type, func_type, func_value)\ __PYX__VERIFY_RETURN_INT(target_type, func_type, func_value, 0) #define __PYX_VERIFY_RETURN_INT_EXC(target_type, func_type, func_value)\ __PYX__VERIFY_RETURN_INT(target_type, func_type, func_value, 1) @@ -5493,12 +7053,381 @@ static void __Pyx_ReleaseBuffer(Py_buffer *view) { return (target_type) value;\ } -#if CYTHON_USE_PYLONG_INTERNALS - #include "longintrepr.h" +/* CIntToPy */ + static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value) { + const int neg_one = (int) ((int) 0 - (int) 1), const_zero = (int) 0; + const int is_unsigned = neg_one > const_zero; + if (is_unsigned) { + if (sizeof(int) < sizeof(long)) { + return PyInt_FromLong((long) value); + } else if (sizeof(int) <= sizeof(unsigned long)) { + return PyLong_FromUnsignedLong((unsigned long) value); +#ifdef HAVE_LONG_LONG + } else if (sizeof(int) <= sizeof(unsigned PY_LONG_LONG)) { + return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); +#endif + } + } else { + if (sizeof(int) <= sizeof(long)) { + return PyInt_FromLong((long) value); +#ifdef HAVE_LONG_LONG + } else if (sizeof(int) <= sizeof(PY_LONG_LONG)) { + return PyLong_FromLongLong((PY_LONG_LONG) value); +#endif + } + } + { + int one = 1; int little = (int)*(unsigned char *)&one; + unsigned char *bytes = (unsigned char *)&value; + return _PyLong_FromByteArray(bytes, sizeof(int), + little, !is_unsigned); + } +} + +/* Declarations */ + #if CYTHON_CCOMPLEX + #ifdef __cplusplus + static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) { + return ::std::complex< float >(x, y); + } + #else + static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) { + return x + y*(__pyx_t_float_complex)_Complex_I; + } + #endif +#else + static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) { + __pyx_t_float_complex z; + z.real = x; + z.imag = y; + return z; + } #endif -static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { - const int neg_one = (int) -1, const_zero = (int) 0; +/* Arithmetic */ + #if CYTHON_CCOMPLEX +#else + static CYTHON_INLINE int __Pyx_c_eq_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { + return (a.real == b.real) && (a.imag == b.imag); + } + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sum_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { + __pyx_t_float_complex z; + z.real = a.real + b.real; + z.imag = a.imag + b.imag; + return z; + } + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_diff_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { + __pyx_t_float_complex z; + z.real = a.real - b.real; + z.imag = a.imag - b.imag; + return z; + } + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_prod_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { + __pyx_t_float_complex z; + z.real = a.real * b.real - a.imag * b.imag; + z.imag = a.real * b.imag + a.imag * b.real; + return z; + } + #if 1 + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quot_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { + if (b.imag == 0) { + return __pyx_t_float_complex_from_parts(a.real / b.real, a.imag / b.real); + } else if (fabsf(b.real) >= fabsf(b.imag)) { + if (b.real == 0 && b.imag == 0) { + return __pyx_t_float_complex_from_parts(a.real / b.real, a.imag / b.imag); + } else { + float r = b.imag / b.real; + float s = 1.0 / (b.real + b.imag * r); + return __pyx_t_float_complex_from_parts( + (a.real + a.imag * r) * s, (a.imag - a.real * r) * s); + } + } else { + float r = b.real / b.imag; + float s = 1.0 / (b.imag + b.real * r); + return __pyx_t_float_complex_from_parts( + (a.real * r + a.imag) * s, (a.imag * r - a.real) * s); + } + } + #else + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quot_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { + if (b.imag == 0) { + return __pyx_t_float_complex_from_parts(a.real / b.real, a.imag / b.real); + } else { + float denom = b.real * b.real + b.imag * b.imag; + return __pyx_t_float_complex_from_parts( + (a.real * b.real + a.imag * b.imag) / denom, + (a.imag * b.real - a.real * b.imag) / denom); + } + } + #endif + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_neg_float(__pyx_t_float_complex a) { + __pyx_t_float_complex z; + z.real = -a.real; + z.imag = -a.imag; + return z; + } + static CYTHON_INLINE int __Pyx_c_is_zero_float(__pyx_t_float_complex a) { + return (a.real == 0) && (a.imag == 0); + } + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conj_float(__pyx_t_float_complex a) { + __pyx_t_float_complex z; + z.real = a.real; + z.imag = -a.imag; + return z; + } + #if 1 + static CYTHON_INLINE float __Pyx_c_abs_float(__pyx_t_float_complex z) { + #if !defined(HAVE_HYPOT) || defined(_MSC_VER) + return sqrtf(z.real*z.real + z.imag*z.imag); + #else + return hypotf(z.real, z.imag); + #endif + } + static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_pow_float(__pyx_t_float_complex a, __pyx_t_float_complex b) { + __pyx_t_float_complex z; + float r, lnr, theta, z_r, z_theta; + if (b.imag == 0 && b.real == (int)b.real) { + if (b.real < 0) { + float denom = a.real * a.real + a.imag * a.imag; + a.real = a.real / denom; + a.imag = -a.imag / denom; + b.real = -b.real; + } + switch ((int)b.real) { + case 0: + z.real = 1; + z.imag = 0; + return z; + case 1: + return a; + case 2: + z = __Pyx_c_prod_float(a, a); + return __Pyx_c_prod_float(a, a); + case 3: + z = __Pyx_c_prod_float(a, a); + return __Pyx_c_prod_float(z, a); + case 4: + z = __Pyx_c_prod_float(a, a); + return __Pyx_c_prod_float(z, z); + } + } + if (a.imag == 0) { + if (a.real == 0) { + return a; + } else if (b.imag == 0) { + z.real = powf(a.real, b.real); + z.imag = 0; + return z; + } else if (a.real > 0) { + r = a.real; + theta = 0; + } else { + r = -a.real; + theta = atan2f(0, -1); + } + } else { + r = __Pyx_c_abs_float(a); + theta = atan2f(a.imag, a.real); + } + lnr = logf(r); + z_r = expf(lnr * b.real - theta * b.imag); + z_theta = theta * b.real + lnr * b.imag; + z.real = z_r * cosf(z_theta); + z.imag = z_r * sinf(z_theta); + return z; + } + #endif +#endif + +/* Declarations */ + #if CYTHON_CCOMPLEX + #ifdef __cplusplus + static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) { + return ::std::complex< double >(x, y); + } + #else + static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) { + return x + y*(__pyx_t_double_complex)_Complex_I; + } + #endif +#else + static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) { + __pyx_t_double_complex z; + z.real = x; + z.imag = y; + return z; + } +#endif + +/* Arithmetic */ + #if CYTHON_CCOMPLEX +#else + static CYTHON_INLINE int __Pyx_c_eq_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { + return (a.real == b.real) && (a.imag == b.imag); + } + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { + __pyx_t_double_complex z; + z.real = a.real + b.real; + z.imag = a.imag + b.imag; + return z; + } + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { + __pyx_t_double_complex z; + z.real = a.real - b.real; + z.imag = a.imag - b.imag; + return z; + } + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_prod_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { + __pyx_t_double_complex z; + z.real = a.real * b.real - a.imag * b.imag; + z.imag = a.real * b.imag + a.imag * b.real; + return z; + } + #if 1 + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { + if (b.imag == 0) { + return __pyx_t_double_complex_from_parts(a.real / b.real, a.imag / b.real); + } else if (fabs(b.real) >= fabs(b.imag)) { + if (b.real == 0 && b.imag == 0) { + return __pyx_t_double_complex_from_parts(a.real / b.real, a.imag / b.imag); + } else { + double r = b.imag / b.real; + double s = 1.0 / (b.real + b.imag * r); + return __pyx_t_double_complex_from_parts( + (a.real + a.imag * r) * s, (a.imag - a.real * r) * s); + } + } else { + double r = b.real / b.imag; + double s = 1.0 / (b.imag + b.real * r); + return __pyx_t_double_complex_from_parts( + (a.real * r + a.imag) * s, (a.imag * r - a.real) * s); + } + } + #else + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { + if (b.imag == 0) { + return __pyx_t_double_complex_from_parts(a.real / b.real, a.imag / b.real); + } else { + double denom = b.real * b.real + b.imag * b.imag; + return __pyx_t_double_complex_from_parts( + (a.real * b.real + a.imag * b.imag) / denom, + (a.imag * b.real - a.real * b.imag) / denom); + } + } + #endif + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg_double(__pyx_t_double_complex a) { + __pyx_t_double_complex z; + z.real = -a.real; + z.imag = -a.imag; + return z; + } + static CYTHON_INLINE int __Pyx_c_is_zero_double(__pyx_t_double_complex a) { + return (a.real == 0) && (a.imag == 0); + } + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj_double(__pyx_t_double_complex a) { + __pyx_t_double_complex z; + z.real = a.real; + z.imag = -a.imag; + return z; + } + #if 1 + static CYTHON_INLINE double __Pyx_c_abs_double(__pyx_t_double_complex z) { + #if !defined(HAVE_HYPOT) || defined(_MSC_VER) + return sqrt(z.real*z.real + z.imag*z.imag); + #else + return hypot(z.real, z.imag); + #endif + } + static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow_double(__pyx_t_double_complex a, __pyx_t_double_complex b) { + __pyx_t_double_complex z; + double r, lnr, theta, z_r, z_theta; + if (b.imag == 0 && b.real == (int)b.real) { + if (b.real < 0) { + double denom = a.real * a.real + a.imag * a.imag; + a.real = a.real / denom; + a.imag = -a.imag / denom; + b.real = -b.real; + } + switch ((int)b.real) { + case 0: + z.real = 1; + z.imag = 0; + return z; + case 1: + return a; + case 2: + z = __Pyx_c_prod_double(a, a); + return __Pyx_c_prod_double(a, a); + case 3: + z = __Pyx_c_prod_double(a, a); + return __Pyx_c_prod_double(z, a); + case 4: + z = __Pyx_c_prod_double(a, a); + return __Pyx_c_prod_double(z, z); + } + } + if (a.imag == 0) { + if (a.real == 0) { + return a; + } else if (b.imag == 0) { + z.real = pow(a.real, b.real); + z.imag = 0; + return z; + } else if (a.real > 0) { + r = a.real; + theta = 0; + } else { + r = -a.real; + theta = atan2(0, -1); + } + } else { + r = __Pyx_c_abs_double(a); + theta = atan2(a.imag, a.real); + } + lnr = log(r); + z_r = exp(lnr * b.real - theta * b.imag); + z_theta = theta * b.real + lnr * b.imag; + z.real = z_r * cos(z_theta); + z.imag = z_r * sin(z_theta); + return z; + } + #endif +#endif + +/* CIntToPy */ + static CYTHON_INLINE PyObject* __Pyx_PyInt_From_enum__NPY_TYPES(enum NPY_TYPES value) { + const enum NPY_TYPES neg_one = (enum NPY_TYPES) ((enum NPY_TYPES) 0 - (enum NPY_TYPES) 1), const_zero = (enum NPY_TYPES) 0; + const int is_unsigned = neg_one > const_zero; + if (is_unsigned) { + if (sizeof(enum NPY_TYPES) < sizeof(long)) { + return PyInt_FromLong((long) value); + } else if (sizeof(enum NPY_TYPES) <= sizeof(unsigned long)) { + return PyLong_FromUnsignedLong((unsigned long) value); +#ifdef HAVE_LONG_LONG + } else if (sizeof(enum NPY_TYPES) <= sizeof(unsigned PY_LONG_LONG)) { + return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); +#endif + } + } else { + if (sizeof(enum NPY_TYPES) <= sizeof(long)) { + return PyInt_FromLong((long) value); +#ifdef HAVE_LONG_LONG + } else if (sizeof(enum NPY_TYPES) <= sizeof(PY_LONG_LONG)) { + return PyLong_FromLongLong((PY_LONG_LONG) value); +#endif + } + } + { + int one = 1; int little = (int)*(unsigned char *)&one; + unsigned char *bytes = (unsigned char *)&value; + return _PyLong_FromByteArray(bytes, sizeof(enum NPY_TYPES), + little, !is_unsigned); + } +} + +/* CIntFromPy */ + static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { + const int neg_one = (int) ((int) 0 - (int) 1), const_zero = (int) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { @@ -5523,27 +7452,27 @@ static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { case 2: if (8 * sizeof(int) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) >= 2 * PyLong_SHIFT) { - return (int) (((((int)digits[1]) << PyLong_SHIFT) | digits[0])); + return (int) (((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0])); } } break; case 3: if (8 * sizeof(int) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) >= 3 * PyLong_SHIFT) { - return (int) (((((((int)digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0])); + return (int) (((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0])); } } break; case 4: if (8 * sizeof(int) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) >= 4 * PyLong_SHIFT) { - return (int) (((((((((int)digits[3]) << PyLong_SHIFT) | digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0])); + return (int) (((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0])); } } break; @@ -5564,67 +7493,69 @@ static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { #endif if (sizeof(int) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(int, unsigned long, PyLong_AsUnsignedLong(x)) +#ifdef HAVE_LONG_LONG } else if (sizeof(int) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(int, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) +#endif } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (int) 0; - case -1: __PYX_VERIFY_RETURN_INT(int, sdigit, -(sdigit) digits[0]) + case -1: __PYX_VERIFY_RETURN_INT(int, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(int, digit, +digits[0]) case -2: if (8 * sizeof(int) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) - 1 > 2 * PyLong_SHIFT) { - return (int) -(((((int)digits[1]) << PyLong_SHIFT) | digits[0])); + return (int) (((int)-1)*(((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; case 2: if (8 * sizeof(int) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) - 1 > 2 * PyLong_SHIFT) { - return (int) (((((int)digits[1]) << PyLong_SHIFT) | digits[0])); + return (int) ((((((int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; case -3: if (8 * sizeof(int) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) - 1 > 3 * PyLong_SHIFT) { - return (int) -(((((((int)digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0])); + return (int) (((int)-1)*(((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; case 3: if (8 * sizeof(int) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) - 1 > 3 * PyLong_SHIFT) { - return (int) (((((((int)digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0])); + return (int) ((((((((int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; case -4: if (8 * sizeof(int) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(int, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) - 1 > 4 * PyLong_SHIFT) { - return (int) -(((((((((int)digits[3]) << PyLong_SHIFT) | digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0])); + return (int) (((int)-1)*(((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; case 4: if (8 * sizeof(int) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(int, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(int) - 1 > 4 * PyLong_SHIFT) { - return (int) (((((((((int)digits[3]) << PyLong_SHIFT) | digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0])); + return (int) ((((((((((int)digits[3]) << PyLong_SHIFT) | (int)digits[2]) << PyLong_SHIFT) | (int)digits[1]) << PyLong_SHIFT) | (int)digits[0]))); } } break; @@ -5632,8 +7563,10 @@ static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { #endif if (sizeof(int) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(int, long, PyLong_AsLong(x)) +#ifdef HAVE_LONG_LONG } else if (sizeof(int) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(int, PY_LONG_LONG, PyLong_AsLongLong(x)) +#endif } } { @@ -5642,7 +7575,7 @@ static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else int val; - PyObject *v = __Pyx_PyNumber_Int(x); + PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; @@ -5665,7 +7598,7 @@ static CYTHON_INLINE int __Pyx_PyInt_As_int(PyObject *x) { } } else { int val; - PyObject *tmp = __Pyx_PyNumber_Int(x); + PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (int) -1; val = __Pyx_PyInt_As_int(tmp); Py_DECREF(tmp); @@ -5681,314 +7614,27 @@ raise_neg_overflow: return (int) -1; } -static CYTHON_INLINE PyObject* __Pyx_PyInt_From_int(int value) { - const int neg_one = (int) -1, const_zero = (int) 0; - const int is_unsigned = neg_one > const_zero; - if (is_unsigned) { - if (sizeof(int) < sizeof(long)) { - return PyInt_FromLong((long) value); - } else if (sizeof(int) <= sizeof(unsigned long)) { - return PyLong_FromUnsignedLong((unsigned long) value); - } else if (sizeof(int) <= sizeof(unsigned PY_LONG_LONG)) { - return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); - } - } else { - if (sizeof(int) <= sizeof(long)) { - return PyInt_FromLong((long) value); - } else if (sizeof(int) <= sizeof(PY_LONG_LONG)) { - return PyLong_FromLongLong((PY_LONG_LONG) value); - } - } - { - int one = 1; int little = (int)*(unsigned char *)&one; - unsigned char *bytes = (unsigned char *)&value; - return _PyLong_FromByteArray(bytes, sizeof(int), - little, !is_unsigned); - } -} - -#if CYTHON_CCOMPLEX - #ifdef __cplusplus - static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) { - return ::std::complex< float >(x, y); - } - #else - static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) { - return x + y*(__pyx_t_float_complex)_Complex_I; - } - #endif -#else - static CYTHON_INLINE __pyx_t_float_complex __pyx_t_float_complex_from_parts(float x, float y) { - __pyx_t_float_complex z; - z.real = x; - z.imag = y; - return z; - } -#endif - -#if CYTHON_CCOMPLEX -#else - static CYTHON_INLINE int __Pyx_c_eqf(__pyx_t_float_complex a, __pyx_t_float_complex b) { - return (a.real == b.real) && (a.imag == b.imag); - } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_sumf(__pyx_t_float_complex a, __pyx_t_float_complex b) { - __pyx_t_float_complex z; - z.real = a.real + b.real; - z.imag = a.imag + b.imag; - return z; - } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_difff(__pyx_t_float_complex a, __pyx_t_float_complex b) { - __pyx_t_float_complex z; - z.real = a.real - b.real; - z.imag = a.imag - b.imag; - return z; - } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_prodf(__pyx_t_float_complex a, __pyx_t_float_complex b) { - __pyx_t_float_complex z; - z.real = a.real * b.real - a.imag * b.imag; - z.imag = a.real * b.imag + a.imag * b.real; - return z; - } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_quotf(__pyx_t_float_complex a, __pyx_t_float_complex b) { - __pyx_t_float_complex z; - float denom = b.real * b.real + b.imag * b.imag; - z.real = (a.real * b.real + a.imag * b.imag) / denom; - z.imag = (a.imag * b.real - a.real * b.imag) / denom; - return z; - } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_negf(__pyx_t_float_complex a) { - __pyx_t_float_complex z; - z.real = -a.real; - z.imag = -a.imag; - return z; - } - static CYTHON_INLINE int __Pyx_c_is_zerof(__pyx_t_float_complex a) { - return (a.real == 0) && (a.imag == 0); - } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_conjf(__pyx_t_float_complex a) { - __pyx_t_float_complex z; - z.real = a.real; - z.imag = -a.imag; - return z; - } - #if 1 - static CYTHON_INLINE float __Pyx_c_absf(__pyx_t_float_complex z) { - #if !defined(HAVE_HYPOT) || defined(_MSC_VER) - return sqrtf(z.real*z.real + z.imag*z.imag); - #else - return hypotf(z.real, z.imag); - #endif - } - static CYTHON_INLINE __pyx_t_float_complex __Pyx_c_powf(__pyx_t_float_complex a, __pyx_t_float_complex b) { - __pyx_t_float_complex z; - float r, lnr, theta, z_r, z_theta; - if (b.imag == 0 && b.real == (int)b.real) { - if (b.real < 0) { - float denom = a.real * a.real + a.imag * a.imag; - a.real = a.real / denom; - a.imag = -a.imag / denom; - b.real = -b.real; - } - switch ((int)b.real) { - case 0: - z.real = 1; - z.imag = 0; - return z; - case 1: - return a; - case 2: - z = __Pyx_c_prodf(a, a); - return __Pyx_c_prodf(a, a); - case 3: - z = __Pyx_c_prodf(a, a); - return __Pyx_c_prodf(z, a); - case 4: - z = __Pyx_c_prodf(a, a); - return __Pyx_c_prodf(z, z); - } - } - if (a.imag == 0) { - if (a.real == 0) { - return a; - } - r = a.real; - theta = 0; - } else { - r = __Pyx_c_absf(a); - theta = atan2f(a.imag, a.real); - } - lnr = logf(r); - z_r = expf(lnr * b.real - theta * b.imag); - z_theta = theta * b.real + lnr * b.imag; - z.real = z_r * cosf(z_theta); - z.imag = z_r * sinf(z_theta); - return z; - } - #endif -#endif - -#if CYTHON_CCOMPLEX - #ifdef __cplusplus - static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) { - return ::std::complex< double >(x, y); - } - #else - static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) { - return x + y*(__pyx_t_double_complex)_Complex_I; - } - #endif -#else - static CYTHON_INLINE __pyx_t_double_complex __pyx_t_double_complex_from_parts(double x, double y) { - __pyx_t_double_complex z; - z.real = x; - z.imag = y; - return z; - } -#endif - -#if CYTHON_CCOMPLEX -#else - static CYTHON_INLINE int __Pyx_c_eq(__pyx_t_double_complex a, __pyx_t_double_complex b) { - return (a.real == b.real) && (a.imag == b.imag); - } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_sum(__pyx_t_double_complex a, __pyx_t_double_complex b) { - __pyx_t_double_complex z; - z.real = a.real + b.real; - z.imag = a.imag + b.imag; - return z; - } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_diff(__pyx_t_double_complex a, __pyx_t_double_complex b) { - __pyx_t_double_complex z; - z.real = a.real - b.real; - z.imag = a.imag - b.imag; - return z; - } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_prod(__pyx_t_double_complex a, __pyx_t_double_complex b) { - __pyx_t_double_complex z; - z.real = a.real * b.real - a.imag * b.imag; - z.imag = a.real * b.imag + a.imag * b.real; - return z; - } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_quot(__pyx_t_double_complex a, __pyx_t_double_complex b) { - __pyx_t_double_complex z; - double denom = b.real * b.real + b.imag * b.imag; - z.real = (a.real * b.real + a.imag * b.imag) / denom; - z.imag = (a.imag * b.real - a.real * b.imag) / denom; - return z; - } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_neg(__pyx_t_double_complex a) { - __pyx_t_double_complex z; - z.real = -a.real; - z.imag = -a.imag; - return z; - } - static CYTHON_INLINE int __Pyx_c_is_zero(__pyx_t_double_complex a) { - return (a.real == 0) && (a.imag == 0); - } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_conj(__pyx_t_double_complex a) { - __pyx_t_double_complex z; - z.real = a.real; - z.imag = -a.imag; - return z; - } - #if 1 - static CYTHON_INLINE double __Pyx_c_abs(__pyx_t_double_complex z) { - #if !defined(HAVE_HYPOT) || defined(_MSC_VER) - return sqrt(z.real*z.real + z.imag*z.imag); - #else - return hypot(z.real, z.imag); - #endif - } - static CYTHON_INLINE __pyx_t_double_complex __Pyx_c_pow(__pyx_t_double_complex a, __pyx_t_double_complex b) { - __pyx_t_double_complex z; - double r, lnr, theta, z_r, z_theta; - if (b.imag == 0 && b.real == (int)b.real) { - if (b.real < 0) { - double denom = a.real * a.real + a.imag * a.imag; - a.real = a.real / denom; - a.imag = -a.imag / denom; - b.real = -b.real; - } - switch ((int)b.real) { - case 0: - z.real = 1; - z.imag = 0; - return z; - case 1: - return a; - case 2: - z = __Pyx_c_prod(a, a); - return __Pyx_c_prod(a, a); - case 3: - z = __Pyx_c_prod(a, a); - return __Pyx_c_prod(z, a); - case 4: - z = __Pyx_c_prod(a, a); - return __Pyx_c_prod(z, z); - } - } - if (a.imag == 0) { - if (a.real == 0) { - return a; - } - r = a.real; - theta = 0; - } else { - r = __Pyx_c_abs(a); - theta = atan2(a.imag, a.real); - } - lnr = log(r); - z_r = exp(lnr * b.real - theta * b.imag); - z_theta = theta * b.real + lnr * b.imag; - z.real = z_r * cos(z_theta); - z.imag = z_r * sin(z_theta); - return z; - } - #endif -#endif - -static CYTHON_INLINE PyObject* __Pyx_PyInt_From_enum__NPY_TYPES(enum NPY_TYPES value) { - const enum NPY_TYPES neg_one = (enum NPY_TYPES) -1, const_zero = (enum NPY_TYPES) 0; - const int is_unsigned = neg_one > const_zero; - if (is_unsigned) { - if (sizeof(enum NPY_TYPES) < sizeof(long)) { - return PyInt_FromLong((long) value); - } else if (sizeof(enum NPY_TYPES) <= sizeof(unsigned long)) { - return PyLong_FromUnsignedLong((unsigned long) value); - } else if (sizeof(enum NPY_TYPES) <= sizeof(unsigned PY_LONG_LONG)) { - return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); - } - } else { - if (sizeof(enum NPY_TYPES) <= sizeof(long)) { - return PyInt_FromLong((long) value); - } else if (sizeof(enum NPY_TYPES) <= sizeof(PY_LONG_LONG)) { - return PyLong_FromLongLong((PY_LONG_LONG) value); - } - } - { - int one = 1; int little = (int)*(unsigned char *)&one; - unsigned char *bytes = (unsigned char *)&value; - return _PyLong_FromByteArray(bytes, sizeof(enum NPY_TYPES), - little, !is_unsigned); - } -} - -static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) { - const long neg_one = (long) -1, const_zero = (long) 0; +/* CIntToPy */ + static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) { + const long neg_one = (long) ((long) 0 - (long) 1), const_zero = (long) 0; const int is_unsigned = neg_one > const_zero; if (is_unsigned) { if (sizeof(long) < sizeof(long)) { return PyInt_FromLong((long) value); } else if (sizeof(long) <= sizeof(unsigned long)) { return PyLong_FromUnsignedLong((unsigned long) value); +#ifdef HAVE_LONG_LONG } else if (sizeof(long) <= sizeof(unsigned PY_LONG_LONG)) { return PyLong_FromUnsignedLongLong((unsigned PY_LONG_LONG) value); +#endif } } else { if (sizeof(long) <= sizeof(long)) { return PyInt_FromLong((long) value); +#ifdef HAVE_LONG_LONG } else if (sizeof(long) <= sizeof(PY_LONG_LONG)) { return PyLong_FromLongLong((PY_LONG_LONG) value); +#endif } } { @@ -5999,8 +7645,9 @@ static CYTHON_INLINE PyObject* __Pyx_PyInt_From_long(long value) { } } -static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { - const long neg_one = (long) -1, const_zero = (long) 0; +/* CIntFromPy */ + static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { + const long neg_one = (long) ((long) 0 - (long) 1), const_zero = (long) 0; const int is_unsigned = neg_one > const_zero; #if PY_MAJOR_VERSION < 3 if (likely(PyInt_Check(x))) { @@ -6025,27 +7672,27 @@ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { case 2: if (8 * sizeof(long) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) >= 2 * PyLong_SHIFT) { - return (long) (((((long)digits[1]) << PyLong_SHIFT) | digits[0])); + return (long) (((((long)digits[1]) << PyLong_SHIFT) | (long)digits[0])); } } break; case 3: if (8 * sizeof(long) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) >= 3 * PyLong_SHIFT) { - return (long) (((((((long)digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0])); + return (long) (((((((long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0])); } } break; case 4: if (8 * sizeof(long) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) >= 4 * PyLong_SHIFT) { - return (long) (((((((((long)digits[3]) << PyLong_SHIFT) | digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0])); + return (long) (((((((((long)digits[3]) << PyLong_SHIFT) | (long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0])); } } break; @@ -6066,67 +7713,69 @@ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { #endif if (sizeof(long) <= sizeof(unsigned long)) { __PYX_VERIFY_RETURN_INT_EXC(long, unsigned long, PyLong_AsUnsignedLong(x)) +#ifdef HAVE_LONG_LONG } else if (sizeof(long) <= sizeof(unsigned PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(long, unsigned PY_LONG_LONG, PyLong_AsUnsignedLongLong(x)) +#endif } } else { #if CYTHON_USE_PYLONG_INTERNALS const digit* digits = ((PyLongObject*)x)->ob_digit; switch (Py_SIZE(x)) { case 0: return (long) 0; - case -1: __PYX_VERIFY_RETURN_INT(long, sdigit, -(sdigit) digits[0]) + case -1: __PYX_VERIFY_RETURN_INT(long, sdigit, (sdigit) (-(sdigit)digits[0])) case 1: __PYX_VERIFY_RETURN_INT(long, digit, +digits[0]) case -2: if (8 * sizeof(long) - 1 > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(long, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(long, long, -(long) (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) { - return (long) -(((((long)digits[1]) << PyLong_SHIFT) | digits[0])); + return (long) (((long)-1)*(((((long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); } } break; case 2: if (8 * sizeof(long) > 1 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 2 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) { - return (long) (((((long)digits[1]) << PyLong_SHIFT) | digits[0])); + return (long) ((((((long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); } } break; case -3: if (8 * sizeof(long) - 1 > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(long, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(long, long, -(long) (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) { - return (long) -(((((((long)digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0])); + return (long) (((long)-1)*(((((((long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); } } break; case 3: if (8 * sizeof(long) > 2 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 3 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) { - return (long) (((((((long)digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0])); + return (long) ((((((((long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); } } break; case -4: if (8 * sizeof(long) - 1 > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(long, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(long, long, -(long) (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) - 1 > 4 * PyLong_SHIFT) { - return (long) -(((((((((long)digits[3]) << PyLong_SHIFT) | digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0])); + return (long) (((long)-1)*(((((((((long)digits[3]) << PyLong_SHIFT) | (long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); } } break; case 4: if (8 * sizeof(long) > 3 * PyLong_SHIFT) { if (8 * sizeof(unsigned long) > 4 * PyLong_SHIFT) { - __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0]))) + __PYX_VERIFY_RETURN_INT(long, unsigned long, (((((((((unsigned long)digits[3]) << PyLong_SHIFT) | (unsigned long)digits[2]) << PyLong_SHIFT) | (unsigned long)digits[1]) << PyLong_SHIFT) | (unsigned long)digits[0]))) } else if (8 * sizeof(long) - 1 > 4 * PyLong_SHIFT) { - return (long) (((((((((long)digits[3]) << PyLong_SHIFT) | digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0])); + return (long) ((((((((((long)digits[3]) << PyLong_SHIFT) | (long)digits[2]) << PyLong_SHIFT) | (long)digits[1]) << PyLong_SHIFT) | (long)digits[0]))); } } break; @@ -6134,8 +7783,10 @@ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { #endif if (sizeof(long) <= sizeof(long)) { __PYX_VERIFY_RETURN_INT_EXC(long, long, PyLong_AsLong(x)) +#ifdef HAVE_LONG_LONG } else if (sizeof(long) <= sizeof(PY_LONG_LONG)) { __PYX_VERIFY_RETURN_INT_EXC(long, PY_LONG_LONG, PyLong_AsLongLong(x)) +#endif } } { @@ -6144,7 +7795,7 @@ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { "_PyLong_AsByteArray() not available in PyPy, cannot convert large numbers"); #else long val; - PyObject *v = __Pyx_PyNumber_Int(x); + PyObject *v = __Pyx_PyNumber_IntOrLong(x); #if PY_MAJOR_VERSION < 3 if (likely(v) && !PyLong_Check(v)) { PyObject *tmp = v; @@ -6167,7 +7818,7 @@ static CYTHON_INLINE long __Pyx_PyInt_As_long(PyObject *x) { } } else { long val; - PyObject *tmp = __Pyx_PyNumber_Int(x); + PyObject *tmp = __Pyx_PyNumber_IntOrLong(x); if (!tmp) return (long) -1; val = __Pyx_PyInt_As_long(tmp); Py_DECREF(tmp); @@ -6183,7 +7834,108 @@ raise_neg_overflow: return (long) -1; } -static int __Pyx_check_binary_version(void) { +/* FastTypeChecks */ + #if CYTHON_COMPILING_IN_CPYTHON +static int __Pyx_InBases(PyTypeObject *a, PyTypeObject *b) { + while (a) { + a = a->tp_base; + if (a == b) + return 1; + } + return b == &PyBaseObject_Type; +} +static CYTHON_INLINE int __Pyx_IsSubtype(PyTypeObject *a, PyTypeObject *b) { + PyObject *mro; + if (a == b) return 1; + mro = a->tp_mro; + if (likely(mro)) { + Py_ssize_t i, n; + n = PyTuple_GET_SIZE(mro); + for (i = 0; i < n; i++) { + if (PyTuple_GET_ITEM(mro, i) == (PyObject *)b) + return 1; + } + return 0; + } + return __Pyx_InBases(a, b); +} +#if PY_MAJOR_VERSION == 2 +static int __Pyx_inner_PyErr_GivenExceptionMatches2(PyObject *err, PyObject* exc_type1, PyObject* exc_type2) { + PyObject *exception, *value, *tb; + int res; + __Pyx_PyThreadState_declare + __Pyx_PyThreadState_assign + __Pyx_ErrFetch(&exception, &value, &tb); + res = exc_type1 ? PyObject_IsSubclass(err, exc_type1) : 0; + if (unlikely(res == -1)) { + PyErr_WriteUnraisable(err); + res = 0; + } + if (!res) { + res = PyObject_IsSubclass(err, exc_type2); + if (unlikely(res == -1)) { + PyErr_WriteUnraisable(err); + res = 0; + } + } + __Pyx_ErrRestore(exception, value, tb); + return res; +} +#else +static CYTHON_INLINE int __Pyx_inner_PyErr_GivenExceptionMatches2(PyObject *err, PyObject* exc_type1, PyObject *exc_type2) { + int res = exc_type1 ? __Pyx_IsSubtype((PyTypeObject*)err, (PyTypeObject*)exc_type1) : 0; + if (!res) { + res = __Pyx_IsSubtype((PyTypeObject*)err, (PyTypeObject*)exc_type2); + } + return res; +} +#endif +static int __Pyx_PyErr_GivenExceptionMatchesTuple(PyObject *exc_type, PyObject *tuple) { + Py_ssize_t i, n; + assert(PyExceptionClass_Check(exc_type)); + n = PyTuple_GET_SIZE(tuple); +#if PY_MAJOR_VERSION >= 3 + for (i=0; itp_basicsize; -#else - py_basicsize = PyObject_GetAttrString(result, "__basicsize__"); - if (!py_basicsize) - goto bad; - basicsize = PyLong_AsSsize_t(py_basicsize); - Py_DECREF(py_basicsize); - py_basicsize = 0; - if (basicsize == (Py_ssize_t)-1 && PyErr_Occurred()) - goto bad; -#endif - if (!strict && (size_t)basicsize > size) { - PyOS_snprintf(warning, sizeof(warning), - "%s.%s size changed, may indicate binary incompatibility", - module_name, class_name); - if (PyErr_WarnEx(NULL, warning, 0) < 0) goto bad; - } - else if ((size_t)basicsize != size) { - PyErr_Format(PyExc_ValueError, - "%.200s.%.200s has the wrong size, try recompiling", - module_name, class_name); - goto bad; - } - return (PyTypeObject *)result; -bad: - Py_XDECREF(py_module); - Py_XDECREF(result); - return NULL; -} -#endif - -static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) { +/* InitStrings */ + static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) { while (t->p) { #if PY_MAJOR_VERSION < 3 if (t->is_unicode) { @@ -6304,6 +7976,8 @@ static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) { #endif if (!*t->p) return -1; + if (PyObject_Hash(*t->p) == -1) + return -1; ++t; } return 0; @@ -6312,50 +7986,57 @@ static int __Pyx_InitStrings(__Pyx_StringTabEntry *t) { static CYTHON_INLINE PyObject* __Pyx_PyUnicode_FromString(const char* c_str) { return __Pyx_PyUnicode_FromStringAndSize(c_str, (Py_ssize_t)strlen(c_str)); } -static CYTHON_INLINE char* __Pyx_PyObject_AsString(PyObject* o) { +static CYTHON_INLINE const char* __Pyx_PyObject_AsString(PyObject* o) { Py_ssize_t ignore; return __Pyx_PyObject_AsStringAndSize(o, &ignore); } -static CYTHON_INLINE char* __Pyx_PyObject_AsStringAndSize(PyObject* o, Py_ssize_t *length) { -#if CYTHON_COMPILING_IN_CPYTHON && (__PYX_DEFAULT_STRING_ENCODING_IS_ASCII || __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT) +#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII || __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT +#if !CYTHON_PEP393_ENABLED +static const char* __Pyx_PyUnicode_AsStringAndSize(PyObject* o, Py_ssize_t *length) { + char* defenc_c; + PyObject* defenc = _PyUnicode_AsDefaultEncodedString(o, NULL); + if (!defenc) return NULL; + defenc_c = PyBytes_AS_STRING(defenc); +#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII + { + char* end = defenc_c + PyBytes_GET_SIZE(defenc); + char* c; + for (c = defenc_c; c < end; c++) { + if ((unsigned char) (*c) >= 128) { + PyUnicode_AsASCIIString(o); + return NULL; + } + } + } +#endif + *length = PyBytes_GET_SIZE(defenc); + return defenc_c; +} +#else +static CYTHON_INLINE const char* __Pyx_PyUnicode_AsStringAndSize(PyObject* o, Py_ssize_t *length) { + if (unlikely(__Pyx_PyUnicode_READY(o) == -1)) return NULL; +#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII + if (likely(PyUnicode_IS_ASCII(o))) { + *length = PyUnicode_GET_LENGTH(o); + return PyUnicode_AsUTF8(o); + } else { + PyUnicode_AsASCIIString(o); + return NULL; + } +#else + return PyUnicode_AsUTF8AndSize(o, length); +#endif +} +#endif +#endif +static CYTHON_INLINE const char* __Pyx_PyObject_AsStringAndSize(PyObject* o, Py_ssize_t *length) { +#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII || __PYX_DEFAULT_STRING_ENCODING_IS_DEFAULT if ( #if PY_MAJOR_VERSION < 3 && __PYX_DEFAULT_STRING_ENCODING_IS_ASCII __Pyx_sys_getdefaultencoding_not_ascii && #endif PyUnicode_Check(o)) { -#if PY_VERSION_HEX < 0x03030000 - char* defenc_c; - PyObject* defenc = _PyUnicode_AsDefaultEncodedString(o, NULL); - if (!defenc) return NULL; - defenc_c = PyBytes_AS_STRING(defenc); -#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII - { - char* end = defenc_c + PyBytes_GET_SIZE(defenc); - char* c; - for (c = defenc_c; c < end; c++) { - if ((unsigned char) (*c) >= 128) { - PyUnicode_AsASCIIString(o); - return NULL; - } - } - } -#endif - *length = PyBytes_GET_SIZE(defenc); - return defenc_c; -#else - if (__Pyx_PyUnicode_READY(o) == -1) return NULL; -#if __PYX_DEFAULT_STRING_ENCODING_IS_ASCII - if (PyUnicode_IS_ASCII(o)) { - *length = PyUnicode_GET_LENGTH(o); - return PyUnicode_AsUTF8(o); - } else { - PyUnicode_AsASCIIString(o); - return NULL; - } -#else - return PyUnicode_AsUTF8AndSize(o, length); -#endif -#endif + return __Pyx_PyUnicode_AsStringAndSize(o, length); } else #endif #if (!CYTHON_COMPILING_IN_PYPY) || (defined(PyByteArray_AS_STRING) && defined(PyByteArray_GET_SIZE)) @@ -6379,43 +8060,74 @@ static CYTHON_INLINE int __Pyx_PyObject_IsTrue(PyObject* x) { if (is_true | (x == Py_False) | (x == Py_None)) return is_true; else return PyObject_IsTrue(x); } -static CYTHON_INLINE PyObject* __Pyx_PyNumber_Int(PyObject* x) { +static CYTHON_INLINE int __Pyx_PyObject_IsTrueAndDecref(PyObject* x) { + int retval; + if (unlikely(!x)) return -1; + retval = __Pyx_PyObject_IsTrue(x); + Py_DECREF(x); + return retval; +} +static PyObject* __Pyx_PyNumber_IntOrLongWrongResultType(PyObject* result, const char* type_name) { +#if PY_MAJOR_VERSION >= 3 + if (PyLong_Check(result)) { + if (PyErr_WarnFormat(PyExc_DeprecationWarning, 1, + "__int__ returned non-int (type %.200s). " + "The ability to return an instance of a strict subclass of int " + "is deprecated, and may be removed in a future version of Python.", + Py_TYPE(result)->tp_name)) { + Py_DECREF(result); + return NULL; + } + return result; + } +#endif + PyErr_Format(PyExc_TypeError, + "__%.4s__ returned non-%.4s (type %.200s)", + type_name, type_name, Py_TYPE(result)->tp_name); + Py_DECREF(result); + return NULL; +} +static CYTHON_INLINE PyObject* __Pyx_PyNumber_IntOrLong(PyObject* x) { +#if CYTHON_USE_TYPE_SLOTS PyNumberMethods *m; +#endif const char *name = NULL; PyObject *res = NULL; #if PY_MAJOR_VERSION < 3 - if (PyInt_Check(x) || PyLong_Check(x)) + if (likely(PyInt_Check(x) || PyLong_Check(x))) #else - if (PyLong_Check(x)) + if (likely(PyLong_Check(x))) #endif return __Pyx_NewRef(x); +#if CYTHON_USE_TYPE_SLOTS m = Py_TYPE(x)->tp_as_number; -#if PY_MAJOR_VERSION < 3 + #if PY_MAJOR_VERSION < 3 if (m && m->nb_int) { name = "int"; - res = PyNumber_Int(x); + res = m->nb_int(x); } else if (m && m->nb_long) { name = "long"; - res = PyNumber_Long(x); + res = m->nb_long(x); } -#else - if (m && m->nb_int) { + #else + if (likely(m && m->nb_int)) { name = "int"; - res = PyNumber_Long(x); + res = m->nb_int(x); + } + #endif +#else + if (!PyBytes_CheckExact(x) && !PyUnicode_CheckExact(x)) { + res = PyNumber_Int(x); } #endif - if (res) { + if (likely(res)) { #if PY_MAJOR_VERSION < 3 - if (!PyInt_Check(res) && !PyLong_Check(res)) { + if (unlikely(!PyInt_Check(res) && !PyLong_Check(res))) { #else - if (!PyLong_Check(res)) { + if (unlikely(!PyLong_CheckExact(res))) { #endif - PyErr_Format(PyExc_TypeError, - "__%.4s__ returned non-%.4s (type %.200s)", - name, name, Py_TYPE(res)->tp_name); - Py_DECREF(res); - return NULL; + return __Pyx_PyNumber_IntOrLongWrongResultType(res, name); } } else if (!PyErr_Occurred()) { @@ -6432,7 +8144,7 @@ static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) { if (sizeof(Py_ssize_t) >= sizeof(long)) return PyInt_AS_LONG(b); else - return PyInt_AsSsize_t(x); + return PyInt_AsSsize_t(b); } #endif if (likely(PyLong_CheckExact(b))) { @@ -6447,32 +8159,32 @@ static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) { switch (size) { case 2: if (8 * sizeof(Py_ssize_t) > 2 * PyLong_SHIFT) { - return (Py_ssize_t) (((((size_t)digits[1]) << PyLong_SHIFT) | digits[0])); + return (Py_ssize_t) (((((size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); } break; case -2: if (8 * sizeof(Py_ssize_t) > 2 * PyLong_SHIFT) { - return -(Py_ssize_t) (((((size_t)digits[1]) << PyLong_SHIFT) | digits[0])); + return -(Py_ssize_t) (((((size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); } break; case 3: if (8 * sizeof(Py_ssize_t) > 3 * PyLong_SHIFT) { - return (Py_ssize_t) (((((((size_t)digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0])); + return (Py_ssize_t) (((((((size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); } break; case -3: if (8 * sizeof(Py_ssize_t) > 3 * PyLong_SHIFT) { - return -(Py_ssize_t) (((((((size_t)digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0])); + return -(Py_ssize_t) (((((((size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); } break; case 4: if (8 * sizeof(Py_ssize_t) > 4 * PyLong_SHIFT) { - return (Py_ssize_t) (((((((((size_t)digits[3]) << PyLong_SHIFT) | digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0])); + return (Py_ssize_t) (((((((((size_t)digits[3]) << PyLong_SHIFT) | (size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); } break; case -4: if (8 * sizeof(Py_ssize_t) > 4 * PyLong_SHIFT) { - return -(Py_ssize_t) (((((((((size_t)digits[3]) << PyLong_SHIFT) | digits[2]) << PyLong_SHIFT) | digits[1]) << PyLong_SHIFT) | digits[0])); + return -(Py_ssize_t) (((((((((size_t)digits[3]) << PyLong_SHIFT) | (size_t)digits[2]) << PyLong_SHIFT) | (size_t)digits[1]) << PyLong_SHIFT) | (size_t)digits[0])); } break; } @@ -6486,6 +8198,9 @@ static CYTHON_INLINE Py_ssize_t __Pyx_PyIndex_AsSsize_t(PyObject* b) { Py_DECREF(x); return ival; } +static CYTHON_INLINE PyObject * __Pyx_PyBool_FromLong(long b) { + return b ? __Pyx_NewRef(Py_True) : __Pyx_NewRef(Py_False); +} static CYTHON_INLINE PyObject * __Pyx_PyInt_FromSize_t(size_t ival) { return PyInt_FromSize_t(ival); } diff --git a/setup.py b/setup.py index 5ab18557..749ba085 100644 --- a/setup.py +++ b/setup.py @@ -84,28 +84,28 @@ try: import numpy as np ext_mods = [Extension(name='GPy.kern.src.stationary_cython', - sources=['GPy/kern/src/stationary_cython.c', + sources=['GPy/kern/src/stationary_cython.pyx', 'GPy/kern/src/stationary_utils.c'], include_dirs=[np.get_include(), '.'], extra_compile_args=compile_flags, extra_link_args=link_args), Extension(name='GPy.util.choleskies_cython', - sources=['GPy/util/choleskies_cython.c'], + sources=['GPy/util/choleskies_cython.pyx'], include_dirs=[np.get_include(), '.'], extra_link_args=link_args, extra_compile_args=compile_flags), Extension(name='GPy.util.linalg_cython', - sources=['GPy/util/linalg_cython.c'], + sources=['GPy/util/linalg_cython.pyx'], include_dirs=[np.get_include(), '.'], extra_compile_args=compile_flags, extra_link_args=link_args), Extension(name='GPy.kern.src.coregionalize_cython', - sources=['GPy/kern/src/coregionalize_cython.c'], + sources=['GPy/kern/src/coregionalize_cython.pyx'], include_dirs=[np.get_include(), '.'], extra_compile_args=compile_flags, extra_link_args=link_args), Extension(name='GPy.models.state_space_cython', - sources=['GPy/models/state_space_cython.c'], + sources=['GPy/models/state_space_cython.pyx'], include_dirs=[np.get_include(), '.'], extra_compile_args=compile_flags, extra_link_args=link_args)]