more re-enstating of some preiov commits.

This commit is contained in:
James Hensman 2013-04-23 17:13:43 +01:00
parent 43b9eacd8a
commit 29115b0ec1
2 changed files with 49 additions and 27 deletions

View file

@ -2,5 +2,9 @@
# Licensed under the BSD 3-clause license (see LICENSE.txt)
from constructors import rbf, Matern32, Matern52, exponential, linear, white, bias, finite_dimensional, spline, Brownian, rbf_sympy, sympykern, periodic_exponential, periodic_Matern32, periodic_Matern52, prod, prod_orthogonal, symmetric, coregionalise, rational_quadratic, fixed, rbfcos
from constructors import rbf, Matern32, Matern52, exponential, linear, white, bias, finite_dimensional, spline, Brownian, periodic_exponential, periodic_Matern32, periodic_Matern52, prod, prod_orthogonal, symmetric, coregionalise, rational_quadratic, fixed, rbfcos, independent_outputs
try:
from constructors import rbf_sympy, sympykern # these depend on sympy
except:
pass
from kern import kern

View file

@ -25,6 +25,7 @@ from symmetric import symmetric as symmetric_part
from coregionalise import coregionalise as coregionalise_part
from rational_quadratic import rational_quadratic as rational_quadraticpart
from rbfcos import rbfcos as rbfcospart
from independent_outputs import independent_outputs as independent_output_part
#TODO these s=constructors are not as clean as we'd like. Tidy the code up
#using meta-classes to make the objects construct properly wthout them.
@ -165,10 +166,15 @@ def Brownian(D,variance=1.):
part = Brownianpart(D,variance)
return kern(D, [part])
try:
import sympy as sp
from sympykern import spkern
from sympy.parsing.sympy_parser import parse_expr
sympy_available = True
except ImportError:
sympy_available = False
if sympy_available:
def rbf_sympy(D,ARD=False,variance=1., lengthscale=1.):
"""
Radial Basis Function covariance.
@ -193,6 +199,7 @@ def sympykern(D,k):
A kernel from a symbolic sympy representation
"""
return kern(D,[spkern(D,k)])
del sympy_available
def periodic_exponential(D=1,variance=1., lengthscale=None, period=2*np.pi,n_freq=10,lower=0.,upper=4*np.pi):
"""
@ -318,3 +325,14 @@ def rbfcos(D,variance=1.,frequencies=None,bandwidths=None,ARD=False):
"""
part = rbfcospart(D,variance,frequencies,bandwidths,ARD)
return kern(D,[part])
def independent_outputs(k):
"""
Construct a kernel with independent outputs from an existing kernel
"""
for sl in k.input_slices:
assert (sl.start is None) and (sl.stop is None), "cannot adjust input slices! (TODO)"
parts = [independent_output_part(p) for p in k.parts]
return kern(k.D+1,parts)