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Adapt likelihoods init to check for sympy.
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commit
19b3784389
5 changed files with 17 additions and 9 deletions
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@ -4,7 +4,7 @@
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import itertools
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import itertools
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import numpy
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import numpy
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from parameter_core import OptimizationHandlable, adjust_name_for_printing
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from parameter_core import OptimizationHandlable, adjust_name_for_printing
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from array_core import ObsAr
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from observable_array import ObsAr
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###### printing
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###### printing
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__constraints_name__ = "Constraint"
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__constraints_name__ = "Constraint"
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@ -4,11 +4,19 @@ from gaussian import Gaussian
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from gamma import Gamma
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from gamma import Gamma
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from poisson import Poisson
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from poisson import Poisson
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from student_t import StudentT
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from student_t import StudentT
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from sstudent_t import SstudentT
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from likelihood import Likelihood
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from likelihood import Likelihood
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from mixed_noise import MixedNoise
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from mixed_noise import MixedNoise
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from symbolic import Symbolic
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# TODO need to fix this in a config file.
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from negative_binomial import Negative_binomial
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try:
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from skew_normal import Skew_normal
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import sympy as sym
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from skew_exponential import Skew_exponential
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sympy_available=True
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from null_category import Null_category
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except ImportError:
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sympy_available=False
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if sympy_available:
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# These are likelihoods that rely on symbolic.
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from symbolic import Symbolic
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from sstudent_t import SstudentT
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from negative_binomial import Negative_binomial
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from skew_normal import Skew_normal
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from skew_exponential import Skew_exponential
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from null_category import Null_category
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@ -7,7 +7,7 @@ import unittest
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import GPy
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import GPy
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import numpy as np
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import numpy as np
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from GPy.core.parameterization.parameter_core import HierarchyError
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from GPy.core.parameterization.parameter_core import HierarchyError
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from GPy.core.parameterization.array_core import ObsAr
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from GPy.core.parameterization.observable_array import ObsAr
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class ArrayCoreTest(unittest.TestCase):
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class ArrayCoreTest(unittest.TestCase):
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def setUp(self):
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def setUp(self):
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@ -10,7 +10,7 @@ from GPy.core.parameterization.index_operations import ParameterIndexOperations,
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ParameterIndexOperationsView
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ParameterIndexOperationsView
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import tempfile
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import tempfile
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from GPy.core.parameterization.param import Param
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from GPy.core.parameterization.param import Param
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from GPy.core.parameterization.array_core import ObsAr
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from GPy.core.parameterization.observable_array import ObsAr
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from GPy.core.parameterization.priors import Gaussian
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from GPy.core.parameterization.priors import Gaussian
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from GPy.kern._src.rbf import RBF
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from GPy.kern._src.rbf import RBF
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from GPy.kern._src.linear import Linear
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from GPy.kern._src.linear import Linear
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