From 2ab1ac33765bb9530e051937a9f8ab2898aa85b0 Mon Sep 17 00:00:00 2001 From: James Hensman Date: Mon, 8 Jul 2013 16:06:36 +0100 Subject: [PATCH 1/4] added link to user mailing list --- README.md | 1 + 1 file changed, 1 insertion(+) diff --git a/README.md b/README.md index 09bc78f5..c027bb3a 100644 --- a/README.md +++ b/README.md @@ -3,6 +3,7 @@ GPy A Gaussian processes framework in python +* [User mailing list](https://lists.shef.ac.uk/sympa/subscribe/gpy-users) * [Online documentation](https://gpy.readthedocs.org/en/latest/) * [Unit tests (Travis-CI)](https://travis-ci.org/SheffieldML/GPy) From e904aec413e540f6808ed3ea50e2a5a6b6861ecb Mon Sep 17 00:00:00 2001 From: mu Date: Mon, 29 Jul 2013 15:47:11 +0100 Subject: [PATCH 2/4] minor change in tutorial --- doc/tuto_GP_regression.rst | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/doc/tuto_GP_regression.rst b/doc/tuto_GP_regression.rst index 3d3ab10a..fe0bdca1 100644 --- a/doc/tuto_GP_regression.rst +++ b/doc/tuto_GP_regression.rst @@ -141,4 +141,4 @@ The flag ``ARD=True`` in the definition of the Matern kernel specifies that we w :align: center :height: 350px - Contour plot of the best predictor (posterior mean). + Contour plot of the mean predictor (posterior mean). From 45f76cc53297a5cd16f140e2bd5611264f190a75 Mon Sep 17 00:00:00 2001 From: Nicolo Fusi Date: Tue, 10 Dec 2013 14:32:30 -0800 Subject: [PATCH 3/4] removed print statements from config parser, commented out ODE kerns --- GPy/kern/parts/__init__.py | 4 ++-- GPy/util/config.py | 4 ++-- 2 files changed, 4 insertions(+), 4 deletions(-) diff --git a/GPy/kern/parts/__init__.py b/GPy/kern/parts/__init__.py index d8e7f8e6..672a7802 100644 --- a/GPy/kern/parts/__init__.py +++ b/GPy/kern/parts/__init__.py @@ -13,8 +13,8 @@ import linear import Matern32 import Matern52 import mlp -import ODE_1 -import ODE_UY +# import ODE_1 +# import ODE_UY import periodic_exponential import periodic_Matern32 import periodic_Matern52 diff --git a/GPy/util/config.py b/GPy/util/config.py index 02796e0b..b0789fe0 100644 --- a/GPy/util/config.py +++ b/GPy/util/config.py @@ -8,8 +8,8 @@ config = ConfigParser.ConfigParser() home = os.getenv('HOME') or os.getenv('USERPROFILE') user_file = os.path.join(home,'.gpy_config.cfg') default_file = os.path.abspath(os.path.join(os.path.dirname( __file__ ), '..', 'gpy_config.cfg')) -print user_file, os.path.isfile(user_file) -print default_file, os.path.isfile(default_file) +# print user_file, os.path.isfile(user_file) +# print default_file, os.path.isfile(default_file) # 1. check if the user has a ~/.gpy_config.cfg if os.path.isfile(user_file): From 7c78358445652e5690f5357ef427308c25dd0ac0 Mon Sep 17 00:00:00 2001 From: James Hensman Date: Thu, 12 Dec 2013 15:45:35 +0000 Subject: [PATCH 4/4] ensure_defaiult constraints in svigp --- GPy/core/svigp.py | 2 ++ 1 file changed, 2 insertions(+) diff --git a/GPy/core/svigp.py b/GPy/core/svigp.py index fdd95aa8..63a16616 100644 --- a/GPy/core/svigp.py +++ b/GPy/core/svigp.py @@ -78,6 +78,8 @@ class SVIGP(GPBase): self._param_steplength_trace = [] self._vb_steplength_trace = [] + self.ensure_default_constraints() + def getstate(self): steplength_params = [self.hbar_t, self.tau_t, self.gbar_t, self.gbar_t1, self.gbar_t2, self.hbar_tp, self.tau_tp, self.gbar_tp, self.adapt_param_steplength, self.adapt_vb_steplength, self.vb_steplength, self.param_steplength] return GPBase.getstate(self) + \